ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 176 bits (89), Expect = 5e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||| ||||||||||| || ||| ||||||| ||||| | ||| |||||||||||||| Sbjct: 74191 tcgctgccgctggagacgcgatgcgcgccgttccccctgcgtcagcacggcggcttctgg 74250 Query: 131 atgccggagccgtttcttccgggcatggcggccgcacgcgcggggttcgagccgaggccg 190 |||||||| |||| || ||||| | | |||||| |||||| | ||||||||| ||||| Sbjct: 74251 ctgccggagacgttcctcccggggctcgaggccgcgcgcgcgcgcttcgagccgcggccg 74310 Query: 191 tctgatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgcc 250 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 74311 tccgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcc 74370 Query: 251 ttcgcgacggtccaccgcgccgaccacccgccgcgcagcctcgaccatccgctccgccgc 310 ||||||||| || |||| |||| | ||||||| | || | ||| ||||||||||| Sbjct: 74371 ttcgcgacgctcaaccgggccgcctacccgccctccggcgagggccacccgctccgccgt 74430 Query: 311 cgcaacccgcacgactgcgtcgacttcctcgagtcgg 347 || ||||||||||||||| | ||||||||||||| Sbjct: 74431 cgtggcccgcacgactgcgtgcagttcctcgagtcgg 74467 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 176 ttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacctgg 235 |||||||||||||| || || ||| |||||||||||||||| |||||||||||||||||| Sbjct: 115762 ttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctgg 115821 Query: 236 ctcaaggccctcgccttcgc 255 |||||||| ||||||||||| Sbjct: 115822 ctcaaggcgctcgccttcgc 115841 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 174 ggttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacct 233 |||||||| ||||||| || || ||| ||| || ||||| || |||||||||||||||| Sbjct: 83547 ggttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacct 83606 Query: 234 ggctcaaggccctcgccttcgcgacggtccaccgcgccgaccacccgccg 283 |||||||||| || ||||||||||| || |||| | ||| ||||||||| Sbjct: 83607 ggctcaaggcgcttgccttcgcgaccatcaaccgggacgagcacccgccg 83656 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 66 tcccatcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggct 125 |||| ||||| |||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 83439 tcccgtcgctgccgctggagacacggtgcccgccgttcccactgcgccagtacggcggct 83498 Query: 126 tctggatgccggag 139 ||||| | |||||| Sbjct: 83499 tctggctaccggag 83512 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 471 tcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggctcttcacca 527 |||| ||| ||||||| ||||||||||||||| || ||||||||||||| ||||||| Sbjct: 116138 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctccatgtggctgttcacca 116194 Score = 63.9 bits (32), Expect = 5e-07 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 46 ggacatggccgagctcgtgatcccatcgctcccgctggagacacggtgcccgccgtttcc 105 |||||||||||||||| ||||| |||| ||||||||||| || |||||||||| || Sbjct: 115635 ggacatggccgagctc---atccccacgctgccgctggagacggggagcccgccgttccc 115691 Query: 106 cctcaggcagtacggcggcttctggatgccggag 139 ||| |||| |||||||||| |||| |||||||| Sbjct: 115692 gctccggcaatacggcggctactggctgccggag 115725 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 405 tcgccacccacatgccctgctccctcctgccggagcg 441 ||||||| ||||| |||| |||||||||||||||||| Sbjct: 116057 tcgccactcacatcccctactccctcctgccggagcg 116093 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcggcactcccttcgccgcg 399 |||||||||||||||||||| Sbjct: 83753 gcggcactcccttcgccgcg 83772
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 176 bits (89), Expect = 5e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||| ||||||||||| || ||| ||||||| ||||| | ||| |||||||||||||| Sbjct: 100184 tcgctgccgctggagacgcgatgcgcgccgttccccctgcgtcagcacggcggcttctgg 100243 Query: 131 atgccggagccgtttcttccgggcatggcggccgcacgcgcggggttcgagccgaggccg 190 |||||||| |||| || ||||| | | |||||| |||||| | ||||||||| ||||| Sbjct: 100244 ctgccggagacgttcctcccggggctcgaggccgcgcgcgcgcgcttcgagccgcggccg 100303 Query: 191 tctgatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgcc 250 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 100304 tccgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcc 100363 Query: 251 ttcgcgacggtccaccgcgccgaccacccgccgcgcagcctcgaccatccgctccgccgc 310 ||||||||| || |||| |||| | ||||||| | || | ||| ||||||||||| Sbjct: 100364 ttcgcgacgctcaaccgggccgcctacccgccctccggcgagggccacccgctccgccgt 100423 Query: 311 cgcaacccgcacgactgcgtcgacttcctcgagtcgg 347 || ||||||||||||||| | ||||||||||||| Sbjct: 100424 cgtggcccgcacgactgcgtgcagttcctcgagtcgg 100460 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 176 ttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacctgg 235 |||||||||||||| || || ||| |||||||||||||||| |||||||||||||||||| Sbjct: 141755 ttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctgg 141814 Query: 236 ctcaaggccctcgccttcgc 255 |||||||| ||||||||||| Sbjct: 141815 ctcaaggcgctcgccttcgc 141834 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 174 ggttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacct 233 |||||||| ||||||| || || ||| ||| || ||||| || |||||||||||||||| Sbjct: 109540 ggttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacct 109599 Query: 234 ggctcaaggccctcgccttcgcgacggtccaccgcgccgaccacccgccg 283 |||||||||| || ||||||||||| || |||| | ||| ||||||||| Sbjct: 109600 ggctcaaggcgcttgccttcgcgaccatcaaccgggacgagcacccgccg 109649 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 66 tcccatcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggct 125 |||| ||||| |||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 109432 tcccgtcgctgccgctggagacacggtgcccgccgttcccactgcgccagtacggcggct 109491 Query: 126 tctggatgccggag 139 ||||| | |||||| Sbjct: 109492 tctggctaccggag 109505 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 471 tcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggctcttcacca 527 |||| ||| ||||||| ||||||||||||||| || ||||||||||||| ||||||| Sbjct: 142131 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctccatgtggctgttcacca 142187 Score = 63.9 bits (32), Expect = 5e-07 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 46 ggacatggccgagctcgtgatcccatcgctcccgctggagacacggtgcccgccgtttcc 105 |||||||||||||||| ||||| |||| ||||||||||| || |||||||||| || Sbjct: 141628 ggacatggccgagctc---atccccacgctgccgctggagacggggagcccgccgttccc 141684 Query: 106 cctcaggcagtacggcggcttctggatgccggag 139 ||| |||| |||||||||| |||| |||||||| Sbjct: 141685 gctccggcaatacggcggctactggctgccggag 141718 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 405 tcgccacccacatgccctgctccctcctgccggagcg 441 ||||||| ||||| |||| |||||||||||||||||| Sbjct: 142050 tcgccactcacatcccctactccctcctgccggagcg 142086 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcggcactcccttcgccgcg 399 |||||||||||||||||||| Sbjct: 109746 gcggcactcccttcgccgcg 109765
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 5e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||| ||||||||||| || ||| ||||||| ||||| | ||| |||||||||||||| Sbjct: 17345260 tcgctgccgctggagacgcgatgcgcgccgttccccctgcgtcagcacggcggcttctgg 17345319 Query: 131 atgccggagccgtttcttccgggcatggcggccgcacgcgcggggttcgagccgaggccg 190 |||||||| |||| || ||||| | | |||||| |||||| | ||||||||| ||||| Sbjct: 17345320 ctgccggagacgttcctcccggggctcgaggccgcgcgcgcgcgcttcgagccgcggccg 17345379 Query: 191 tctgatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgcc 250 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 17345380 tccgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcc 17345439 Query: 251 ttcgcgacggtccaccgcgccgaccacccgccgcgcagcctcgaccatccgctccgccgc 310 ||||||||| || |||| |||| | ||||||| | || | ||| ||||||||||| Sbjct: 17345440 ttcgcgacgctcaaccgggccgcctacccgccctccggcgagggccacccgctccgccgt 17345499 Query: 311 cgcaacccgcacgactgcgtcgacttcctcgagtcgg 347 || ||||||||||||||| | ||||||||||||| Sbjct: 17345500 cgtggcccgcacgactgcgtgcagttcctcgagtcgg 17345536 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 176 ttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacctgg 235 |||||||||||||| || || ||| |||||||||||||||| |||||||||||||||||| Sbjct: 17386980 ttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctgg 17387039 Query: 236 ctcaaggccctcgccttcgc 255 |||||||| ||||||||||| Sbjct: 17387040 ctcaaggcgctcgccttcgc 17387059 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 174 ggttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacct 233 |||||||| ||||||| || || ||| ||| || ||||| || |||||||||||||||| Sbjct: 17354616 ggttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacct 17354675 Query: 234 ggctcaaggccctcgccttcgcgacggtccaccgcgccgaccacccgccg 283 |||||||||| || ||||||||||| || |||| | ||| ||||||||| Sbjct: 17354676 ggctcaaggcgcttgccttcgcgaccatcaaccgggacgagcacccgccg 17354725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 66 tcccatcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggct 125 |||| ||||| |||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 17354508 tcccgtcgctgccgctggagacacggtgcccgccgttcccactgcgccagtacggcggct 17354567 Query: 126 tctggatgccggag 139 ||||| | |||||| Sbjct: 17354568 tctggctaccggag 17354581 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 471 tcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggctcttcacca 527 |||| ||| ||||||| ||||||||||||||| || ||||||||||||| ||||||| Sbjct: 17387356 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctccatgtggctgttcacca 17387412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 46 ggacatggccgagctcgtgatcccatcgctcccgctggagacacggtgcccgccgtttcc 105 |||||||||||||||| ||||| |||| ||||||||||| || |||||||||| || Sbjct: 17386853 ggacatggccgagctc---atccccacgctgccgctggagacggggagcccgccgttccc 17386909 Query: 106 cctcaggcagtacggcggcttctggatgccggag 139 ||| |||| |||||||||| |||| |||||||| Sbjct: 17386910 gctccggcaatacggcggctactggctgccggag 17386943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacgg 260 ||||||| ||| | || |||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 8623281 tcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgccacgg 8623222 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 1892880 tcgccaccttccccaagtccggcaccacatggctcaaggc 1892841 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 405 tcgccacccacatgccctgctccctcctgccggagcg 441 ||||||| ||||| |||| |||||||||||||||||| Sbjct: 17387275 tcgccactcacatcccctactccctcctgccggagcg 17387311 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||||||||||||||||| ||||| Sbjct: 1914513 cttccctaagtccggcaccacctggcttaaggc 1914481 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggc 243 ||||| ||| |||||| |||||| ||||||| ||||||||||| Sbjct: 1895036 tcctcaccaccttccccaagtccagcaccacttggctcaaggc 1894994 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 227 accacctggctcaaggccctcgcctt 252 |||||||||||||| ||||||||||| Sbjct: 14537126 accacctggctcaaagccctcgcctt 14537101 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgccgaccacccgccgcgc 286 |||||||||||||||||||| Sbjct: 26248651 gcgccgaccacccgccgcgc 26248632 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcggcactcccttcgccgcg 399 |||||||||||||||||||| Sbjct: 17354822 gcggcactcccttcgccgcg 17354841 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ctggcggcggccgccatgga 555 |||||||||||||||||||| Sbjct: 14304916 ctggcggcggccgccatgga 14304935 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaa 240 |||||| || |||||| |||||||||||||| ||| |||| Sbjct: 1911107 tcctcgtcaccttccccaagtccggcaccacttggatcaa 1911068
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 176 bits (89), Expect = 5e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||| ||||||||||| || ||| ||||||| ||||| | ||| |||||||||||||| Sbjct: 126 tcgctgccgctggagacgcgatgcgcgccgttccccctgcgtcagcacggcggcttctgg 185 Query: 131 atgccggagccgtttcttccgggcatggcggccgcacgcgcggggttcgagccgaggccg 190 |||||||| |||| || ||||| | | |||||| |||||| | ||||||||| ||||| Sbjct: 186 ctgccggagacgttcctcccggggctcgaggccgcgcgcgcgcgcttcgagccgcggccg 245 Query: 191 tctgatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgcc 250 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 246 tccgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcc 305 Query: 251 ttcgcgacggtccaccgcgccgaccacccgccgcgcagcctcgaccatccgctccgccgc 310 ||||||||| || |||| |||| | ||||||| | || | ||| ||||||||||| Sbjct: 306 ttcgcgacgctcaaccgggccgcctacccgccctccggcgagggccacccgctccgccgt 365 Query: 311 cgcaacccgcacgactgcgtcgacttcctcgagtcgg 347 || ||||||||||||||| | ||||||||||||| Sbjct: 366 cgtggcccgcacgactgcgtgcagttcctcgagtcgg 402
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 5e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||| ||||||||||| || ||| ||||||| ||||| | ||| |||||||||||||| Sbjct: 17439119 tcgctgccgctggagacgcgatgcgcgccgttccccctgcgtcagcacggcggcttctgg 17439178 Query: 131 atgccggagccgtttcttccgggcatggcggccgcacgcgcggggttcgagccgaggccg 190 |||||||| |||| || ||||| | | |||||| |||||| | ||||||||| ||||| Sbjct: 17439179 ctgccggagacgttcctcccggggctcgaggccgcgcgcgcgcgcttcgagccgcggccg 17439238 Query: 191 tctgatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgcc 250 || || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 17439239 tccgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcc 17439298 Query: 251 ttcgcgacggtccaccgcgccgaccacccgccgcgcagcctcgaccatccgctccgccgc 310 ||||||||| || |||| |||| | ||||||| | || | ||| ||||||||||| Sbjct: 17439299 ttcgcgacgctcaaccgggccgcctacccgccctccggcgagggccacccgctccgccgt 17439358 Query: 311 cgcaacccgcacgactgcgtcgacttcctcgagtcgg 347 || ||||||||||||||| | ||||||||||||| Sbjct: 17439359 cgtggcccgcacgactgcgtgcagttcctcgagtcgg 17439395 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 176 ttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacctgg 235 |||||||||||||| || || ||| |||||||||||||||| |||||||||||||||||| Sbjct: 17480690 ttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctgg 17480749 Query: 236 ctcaaggccctcgccttcgc 255 |||||||| ||||||||||| Sbjct: 17480750 ctcaaggcgctcgccttcgc 17480769 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 174 ggttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacct 233 |||||||| ||||||| || || ||| ||| || ||||| || |||||||||||||||| Sbjct: 17448475 ggttcgagacgaggccatccgacgtcttccgtgcgagctttcccaagtccggcaccacct 17448534 Query: 234 ggctcaaggccctcgccttcgcgacggtccaccgcgccgaccacccgccg 283 |||||||||| || ||||||||||| || |||| | ||| ||||||||| Sbjct: 17448535 ggctcaaggcgcttgccttcgcgaccatcaaccgggacgagcacccgccg 17448584 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 66 tcccatcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggct 125 |||| ||||| |||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 17448367 tcccgtcgctgccgctggagacacggtgcccgccgttcccactgcgccagtacggcggct 17448426 Query: 126 tctggatgccggag 139 ||||| | |||||| Sbjct: 17448427 tctggctaccggag 17448440 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 471 tcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggctcttcacca 527 |||| ||| ||||||| ||||||||||||||| || ||||||||||||| ||||||| Sbjct: 17481066 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctccatgtggctgttcacca 17481122 Score = 63.9 bits (32), Expect = 5e-07 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 46 ggacatggccgagctcgtgatcccatcgctcccgctggagacacggtgcccgccgtttcc 105 |||||||||||||||| ||||| |||| ||||||||||| || |||||||||| || Sbjct: 17480563 ggacatggccgagctc---atccccacgctgccgctggagacggggagcccgccgttccc 17480619 Query: 106 cctcaggcagtacggcggcttctggatgccggag 139 ||| |||| |||||||||| |||| |||||||| Sbjct: 17480620 gctccggcaatacggcggctactggctgccggag 17480653 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacgg 260 ||||||| ||| | || |||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 8694044 tcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgccacgg 8693985 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 1890601 tcgccaccttccccaagtccggcaccacatggctcaaggc 1890562 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 405 tcgccacccacatgccctgctccctcctgccggagcg 441 ||||||| ||||| |||| |||||||||||||||||| Sbjct: 17480985 tcgccactcacatcccctactccctcctgccggagcg 17481021 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||||||||||||||||| ||||| Sbjct: 1912234 cttccctaagtccggcaccacctggcttaaggc 1912202 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggc 243 ||||| ||| |||||| |||||| ||||||| ||||||||||| Sbjct: 1892757 tcctcaccaccttccccaagtccagcaccacttggctcaaggc 1892715 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 227 accacctggctcaaggccctcgcctt 252 |||||||||||||| ||||||||||| Sbjct: 14619127 accacctggctcaaagccctcgcctt 14619102 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgccgaccacccgccgcgc 286 |||||||||||||||||||| Sbjct: 26562909 gcgccgaccacccgccgcgc 26562890 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcggcactcccttcgccgcg 399 |||||||||||||||||||| Sbjct: 17448681 gcggcactcccttcgccgcg 17448700 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ctggcggcggccgccatgga 555 |||||||||||||||||||| Sbjct: 14386918 ctggcggcggccgccatgga 14386937 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaa 240 |||||| || |||||| |||||||||||||| ||| |||| Sbjct: 1908828 tcctcgtcaccttccccaagtccggcaccacttggatcaa 1908789
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 176 ttcgagccgaggccgtctgatgtcctcctcgccagcttcccaaagtccggcaccacctgg 235 |||||||||||||| || || ||| |||||||||||||||| |||||||||||||||||| Sbjct: 206 ttcgagccgaggccatccgacgtcttcctcgccagcttccccaagtccggcaccacctgg 265 Query: 236 ctcaaggccctcgccttcgc 255 |||||||| ||||||||||| Sbjct: 266 ctcaaggcgctcgccttcgc 285 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 471 tcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggctcttcacca 527 |||| ||| ||||||| ||||||||||||||| || ||||||||||||| ||||||| Sbjct: 582 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctccatgtggctgttcacca 638 Score = 63.9 bits (32), Expect = 5e-07 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 46 ggacatggccgagctcgtgatcccatcgctcccgctggagacacggtgcccgccgtttcc 105 |||||||||||||||| ||||| |||| ||||||||||| || |||||||||| || Sbjct: 79 ggacatggccgagctc---atccccacgctgccgctggagacggggagcccgccgttccc 135 Query: 106 cctcaggcagtacggcggcttctggatgccggag 139 ||| |||| |||||||||| |||| |||||||| Sbjct: 136 gctccggcaatacggcggctactggctgccggag 169 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 405 tcgccacccacatgccctgctccctcctgccggagcg 441 ||||||| ||||| |||| |||||||||||||||||| Sbjct: 501 tcgccactcacatcccctactccctcctgccggagcg 537
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 58707 ctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 58762 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 292 cgaccatccgctccgccgccgcaacccgcacgactgcgtcgacttcctcgag 343 |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 58799 cgaccacccgctccgccgtcgcaacccgcacgactgcgtcgagttcttcgag 58850 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||||||||||||||| ||||| |||||||| || ||| | | | ||||||||||||| Sbjct: 58578 tcgctcccgctggagacgcggtggccgccgttcccgctccgtcggctcggcggcttctgg 58637 Query: 131 atgcc 135 ||||| Sbjct: 58638 atgcc 58642 Score = 54.0 bits (27), Expect = 5e-04 Identities = 113/141 (80%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 393 cgccgcgcgtgatcgccacccacatgccctgctccctcctgccggagcgagtcacagcag 452 ||||||||||| ||||||||||| | |||| |||||| ||||| |||| |||| || | Sbjct: 58921 cgccgcgcgtgctcgccacccacctaccctactccctgctgcccaagcgcatcaccgccg 58980 Query: 453 acgacgcgggctgcaaggtcgtctacatctgccgcgaccccaaggacgcgctcatctcca 512 ||||| ||||| | || ||||||||||| | |||||||||||| |||| ||||| Sbjct: 58981 gcgacg---gctgccggatcatctacatctgcagggaccccaaggacacgctggtctcct 59037 Query: 513 tgtggctcttcaccaagaaga 533 | |||| |||| ||||||||| Sbjct: 59038 tctggcacttctccaagaaga 59058
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 21712687 ctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 21712742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 292 cgaccatccgctccgccgccgcaacccgcacgactgcgtcgacttcctcgag 343 |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 21712779 cgaccacccgctccgccgtcgcaacccgcacgactgcgtcgagttcttcgag 21712830 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 71 tcgctcccgctggagacacggtgcccgccgtttcccctcaggcagtacggcggcttctgg 130 ||||||||||||||||| ||||| |||||||| || ||| | | | ||||||||||||| Sbjct: 21712558 tcgctcccgctggagacgcggtggccgccgttcccgctccgtcggctcggcggcttctgg 21712617 Query: 131 atgcc 135 ||||| Sbjct: 21712618 atgcc 21712622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 113/141 (80%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 393 cgccgcgcgtgatcgccacccacatgccctgctccctcctgccggagcgagtcacagcag 452 ||||||||||| ||||||||||| | |||| |||||| ||||| |||| |||| || | Sbjct: 21712901 cgccgcgcgtgctcgccacccacctaccctactccctgctgcccaagcgcatcaccgccg 21712960 Query: 453 acgacgcgggctgcaaggtcgtctacatctgccgcgaccccaaggacgcgctcatctcca 512 ||||| ||||| | || ||||||||||| | |||||||||||| |||| ||||| Sbjct: 21712961 gcgacg---gctgccggatcatctacatctgcagggaccccaaggacacgctggtctcct 21713017 Query: 513 tgtggctcttcaccaagaaga 533 | |||| |||| ||||||||| Sbjct: 21713018 tctggcacttctccaagaaga 21713038 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 20927875 ggcggcggccgccatggagg 20927894
>ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||||| || |||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 208 ctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgc 263
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||||| || |||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 25557992 ctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgc 25557937 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcg 254 |||||||||| || |||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 25560360 ctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcg 25560306 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 194 gatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||| |||||||||| || |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 25528314 gatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttc 25528255 Query: 254 gc 255 || Sbjct: 25528254 gc 25528253 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 8468892 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 8468849 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 8458972 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 8459015 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||| ||||||||||||| Sbjct: 10720039 agccccgaccacccgctccgccgcctcaactcgcacgactgcgt 10719996 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 8468985 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgc 8468927 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 8458882 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgc 8458940 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 cagcctcgaccatccgctccgccgccgcaacccgca 321 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 12060030 cagccacgaccacccgctccgccgcctcaacccgca 12060065 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 222 ccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||| ||||||||||||||||| ||||| Sbjct: 10720104 ccgggaccacgtggctcaaggccctcgcgttcgc 10720071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gtggctcttcaccaagaaga 533 |||||||||||||||||||| Sbjct: 15636509 gtggctcttcaccaagaaga 15636490
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||||| || |||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 44683 ctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcgc 44628 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 200 ctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcg 254 |||||||||| || |||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 47051 ctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctccttcg 46997 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 194 gatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||| |||||||||| || |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 15005 gatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttc 14946 Query: 254 gc 255 || Sbjct: 14945 gc 14944
>ref|NM_183698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 227 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 286 Query: 264 accgcg 269 |||||| Sbjct: 287 accgcg 292 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 493 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 531
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 240 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 299 Query: 264 accgcg 269 |||||| Sbjct: 300 accgcg 305 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 506 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 544
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 11687234 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 11687175 Query: 264 accgcg 269 |||||| Sbjct: 11687174 accgcg 11687169 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 11686968 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 11686930
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 126358 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 126299 Query: 264 accgcg 269 |||||| Sbjct: 126298 accgcg 126293 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 126092 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 126054
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 26402 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 26343 Query: 264 accgcg 269 |||||| Sbjct: 26342 accgcg 26337 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 26136 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 26098
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 194 gatgtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||| |||||||||| || |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 159630 gatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctctccttc 159571 Query: 254 gc 255 || Sbjct: 159570 gc 159569
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacggtcc 263 |||||| |||||| |||| |||||||||||||||||||| ||| ||||||||| |||| Sbjct: 299 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctcctcttcgcgaccgtcc 358 Query: 264 accgcg 269 |||||| Sbjct: 359 accgcg 364 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 565 ggctgcaaggtggtgtacatgtgccgcgaccccaaggac 603
>ref|XM_480894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 358 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 401 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 265 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgc 323
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 403 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 446 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 313 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgc 371
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol 3-sulfotransferase (OSJNBb0038H12.7), mRNA Length = 1005 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||| |||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 194 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgc 245
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||| |||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 19406 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgc 19457
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||| |||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 5904477 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgc 5904426
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 84609 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 84566 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 74689 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 74732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 84702 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgc 84644 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 74599 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgc 74657
>dbj|AK099021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F24, full insert sequence Length = 1209 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 357 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 400 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 264 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgc 322
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||| |||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 302 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgc 353
>dbj|AK061204.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B05, full insert sequence Length = 1234 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 355 agccccgaccacccgctccgccgcctcaacccgcacgactgcgt 398 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 262 gtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgc 320
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||||||| |||| |||| ||||||||| |||||||||||||| |||||||| Sbjct: 5905663 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgc 5905612
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||| ||| |||| |||| ||||||||| ||||||||||||||||| ||||| Sbjct: 281 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgc 335 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ccgctccgccgccgcaacccgcacgactgcgtc 331 ||||||| ||| | ||||||||||||||||||| Sbjct: 382 ccgctcctccggctcaacccgcacgactgcgtc 414
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||| ||| |||| |||| ||||||||| ||||||||||||||||| ||||| Sbjct: 2550945 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgc 2550891 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 213 tcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 2542870 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgc 2542828 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||| ||||||||||||||||||||||| Sbjct: 2406822 aagtgcggcaccacgtggctcaaggccctcgccttcgc 2406785 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcg 256 |||||||| || ||| | || |||| ||||||||| |||||||||||||| |||||||| Sbjct: 24853020 gtcctcctggcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgcc 24852961 Query: 257 acgg 260 |||| Sbjct: 24852960 acgg 24852957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 464 tgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||||||||||||| | |||||||||||| Sbjct: 24792089 tgcaaggtcgtctacatctgcagggaccccaaggac 24792124 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||| ||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 24791829 tccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 24791883 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 294 accatccgctccgccgccgcaacccgcacgactgcgtc 331 |||| ||||||| ||| | ||||||||||||||||||| Sbjct: 2542762 accacccgctcctccggctcaacccgcacgactgcgtc 2542725 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 296 catccgctccgccgccgcaacccgcacgac 325 |||||||||| ||||| ||||||||||||| Sbjct: 2406733 catccgctcctccgcctcaacccgcacgac 2406704 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcacgactgcgtc 331 ||||||| ||| | ||||||||||||||||||| Sbjct: 2550844 ccgctcctccggctcaacccgcacgactgcgtc 2550812
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 ||||||| ||| |||| |||| ||||||||| ||||||||||||||||| ||||| Sbjct: 115925 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgc 115871 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 213 tcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 107850 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgc 107808 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 294 accatccgctccgccgccgcaacccgcacgactgcgtc 331 |||| ||||||| ||| | ||||||||||||||||||| Sbjct: 107742 accacccgctcctccggctcaacccgcacgactgcgtc 107705 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcacgactgcgtc 331 ||||||| ||| | ||||||||||||||||||| Sbjct: 115824 ccgctcctccggctcaacccgcacgactgcgtc 115792
>ref|NM_186313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||| ||||||||||||||||||||||| Sbjct: 206 aagtgcggcaccacgtggctcaaggccctcgccttcgc 169 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 296 catccgctccgccgccgcaacccgcacgac 325 |||||||||| ||||| ||||||||||||| Sbjct: 117 catccgctcctccgcctcaacccgcacgac 88
>ref|XM_472069.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggc 518 ||||||||| |||||||| | || |||||||||||||||| |||| ||||| |||||| Sbjct: 529 ggctgcaagatcgtctacgtgtggcgcgaccccaaggacgtgctcgtctccctgtggc 586
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggc 518 ||||||||| |||||||| | || |||||||||||||||| |||| ||||| |||||| Sbjct: 17196153 ggctgcaagatcgtctacgtgtggcgcgaccccaaggacgtgctcgtctccctgtggc 17196096 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||| ||| | |||||||||||||||||| Sbjct: 26294378 cgggctgcaaggtcgtgtacgtgtgccgcgaccccaaggac 26294418
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||||||||||||||| ||||||||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgc 9822642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 1822172 tcgccaccttccccaagtccggcaccacatggctcaaggc 1822133 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaag 241 |||||| |||||||||||||||||||||||| Sbjct: 1842486 cttccctaagtccggcaccacctggctcaag 1842456 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaagg 242 ||||| ||| |||||| |||||||||||||| |||||||||| Sbjct: 1830766 tcctcaccaccttccccaagtccggcaccacttggctcaagg 1830725 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 296 catccgctccgccgccgcaacccgcacgactgcgtc 331 |||||||||| ||| | |||||||||||||||||| Sbjct: 9822601 catccgctcctccgtcttaacccgcacgactgcgtc 9822566
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||| ||||||||||||||||||||||| Sbjct: 109830 aagtgcggcaccacgtggctcaaggccctcgccttcgc 109793 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 296 catccgctccgccgccgcaacccgcacgac 325 |||||||||| ||||| ||||||||||||| Sbjct: 109741 catccgctcctccgcctcaacccgcacgac 109712
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||||||||||||||| ||||||||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgc 307 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 296 catccgctccgccgccgcaacccgcacgactgcgtc 331 |||||||||| ||| | |||||||||||||||||| Sbjct: 348 catccgctcctccgtcttaacccgcacgactgcgtc 383
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||||||||||||||| ||||||||||| Sbjct: 9822564 aagtgcggcaccacctggctcaaggcgctcgccttcgc 9822527 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 1822150 tcgccaccttccccaagtccggcaccacatggctcaaggc 1822111 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaag 241 |||||| |||||||||||||||||||||||| Sbjct: 1842464 cttccctaagtccggcaccacctggctcaag 1842434 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaagg 242 ||||| ||| |||||| |||||||||||||| |||||||||| Sbjct: 1830744 tcctcaccaccttccccaagtccggcaccacttggctcaagg 1830703 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 296 catccgctccgccgccgcaacccgcacgactgcgtc 331 |||||||||| ||| | |||||||||||||||||| Sbjct: 9822486 catccgctcctccgtcttaacccgcacgactgcgtc 9822451
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 461 ggctgcaaggtcgtctacatctgccgcgaccccaaggacgcgctcatctccatgtggc 518 ||||||||| |||||||| | || |||||||||||||||| |||| ||||| |||||| Sbjct: 140450 ggctgcaagatcgtctacgtgtggcgcgaccccaaggacgtgctcgtctccctgtggc 140393
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 218 aagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||||||||||||||||| ||||||||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgc 109828 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 296 catccgctccgccgccgcaacccgcacgactgcgtc 331 |||||||||| ||| | |||||||||||||||||| Sbjct: 109869 catccgctcctccgtcttaacccgcacgactgcgtc 109904
>ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||| ||| | |||||||||||||||||| Sbjct: 488 cgggctgcaaggtcgtgtacgtgtgccgcgaccccaaggac 528
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||| ||| | |||||||||||||||||| Sbjct: 70955 cgggctgcaaggtcgtgtacgtgtgccgcgaccccaaggac 70995
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||||||| | ||||| |||||||||||| Sbjct: 24909120 cgggctgcaaggtcgtctacgtgtgccgtgaccccaaggac 24909080
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||||||| | ||||| |||||||||||| Sbjct: 3675 cgggctgcaaggtcgtctacgtgtgccgtgaccccaaggac 3635
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||||||| | ||||| |||||||||||| Sbjct: 120203 cgggctgcaaggtcgtctacgtgtgccgtgaccccaaggac 120163
>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full insert sequence Length = 1274 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 459 cgggctgcaaggtcgtctacatctgccgcgaccccaaggac 499 |||||||||||||||||||| | ||||| |||||||||||| Sbjct: 562 cgggctgcaaggtcgtctacgtgtgccgtgaccccaaggac 602
>ref|XM_481221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||| ||||||||||||| Sbjct: 364 agccccgaccacccgctccgccgcctcaactcgcacgactgcgt 407 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 222 ccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||| ||||||||||||||||| ||||| Sbjct: 299 ccgggaccacgtggctcaaggccctcgcgttcgc 332
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcgacgg 260 ||||||| ||| | || |||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 34447 tcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgccacgg 34388
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 24536 tcgccaccttccccaagtccggcaccacatggctcaaggc 24497 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||||||||||||||||| ||||| Sbjct: 46169 cttccctaagtccggcaccacctggcttaaggc 46137 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggc 243 ||||| ||| |||||| |||||| ||||||| ||||||||||| Sbjct: 26692 tcctcaccaccttccccaagtccagcaccacttggctcaaggc 26650 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaa 240 |||||| || |||||| |||||||||||||| ||| |||| Sbjct: 42763 tcctcgtcaccttccccaagtccggcaccacttggatcaa 42724
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 110710 tcgccaccttccccaagtccggcaccacatggctcaaggc 110671 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||||||||||||||||| ||||| Sbjct: 132343 cttccctaagtccggcaccacctggcttaaggc 132311 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggc 243 ||||| ||| |||||| |||||| ||||||| ||||||||||| Sbjct: 112866 tcctcaccaccttccccaagtccagcaccacttggctcaaggc 112824 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaa 240 |||||| || |||||| |||||||||||||| ||| |||| Sbjct: 128937 tcctcgtcaccttccccaagtccggcaccacttggatcaa 128898
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcg 256 |||||||| || ||| | || |||| ||||||||| |||||||||||||| |||||||| Sbjct: 36652 gtcctcctggcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgcc 36593 Query: 257 acgg 260 |||| Sbjct: 36592 acgg 36589
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 197 gtcctcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgcg 256 |||||||| || ||| | || |||| ||||||||| |||||||||||||| |||||||| Sbjct: 87471 gtcctcctggcgagcctgcccaagtgcggcaccacgtggctcaaggccctggccttcgcc 87412 Query: 257 acgg 260 |||| Sbjct: 87411 acgg 87408 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 464 tgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||||||||||||| | |||||||||||| Sbjct: 26540 tgcaaggtcgtctacatctgcagggaccccaaggac 26575 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||| ||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 26280 tccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 26334
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 287 agcctcgaccatccgctccgccgccgcaacccgcacgactgcgt 330 |||| |||||| ||||||||||||| |||| ||||||||||||| Sbjct: 17171 agccccgaccacccgctccgccgcctcaactcgcacgactgcgt 17128 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 222 ccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||| ||||||||||||||||| ||||| Sbjct: 17236 ccgggaccacgtggctcaaggccctcgcgttcgc 17203
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 464 tgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||||||||||||| | |||||||||||| Sbjct: 562 tgcaaggtcgtctacatctgcagggaccccaaggac 597 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttcgc 255 |||| ||||||| ||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 302 tccttgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 356
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 16890 tcgccaccttccccaagtccggcaccacatggctcaaggc 16851 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 211 cttcccaaagtccggcaccacctggctcaag 241 |||||| |||||||||||||||||||||||| Sbjct: 37204 cttccctaagtccggcaccacctggctcaag 37174 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaagg 242 ||||| ||| |||||| |||||||||||||| |||||||||| Sbjct: 25484 tcctcaccaccttccccaagtccggcaccacttggctcaagg 25443
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggc 243 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 18310 tcgccaccttccccaagtccggcaccacatggctcaaggc 18349 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaagg 242 ||||| ||| |||||| |||||||||||||| |||||||||| Sbjct: 9716 tcctcaccaccttccccaagtccggcaccacttggctcaagg 9757
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 470 gtcgtctacatctgccgcgaccccaaggacgcg 502 ||||||||| | ||||||||||||||||||||| Sbjct: 27986806 gtcgtctacctgtgccgcgaccccaaggacgcg 27986774 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||||||| | | || ||||||||| | || ||||||||||| ||||||||| Sbjct: 27987084 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 27987032 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccgccgccgcaacccgcacg 323 |||||||||||||||||||| Sbjct: 33763660 ccgccgccgcaacccgcacg 33763641
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 470 gtcgtctacatctgccgcgaccccaaggacgcg 502 ||||||||| | ||||||||||||||||||||| Sbjct: 30468 gtcgtctacctgtgccgcgaccccaaggacgcg 30436 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||||||| | | || ||||||||| | || ||||||||||| ||||||||| Sbjct: 30746 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 470 gtcgtctacatctgccgcgaccccaaggacgcg 502 ||||||||| | ||||||||||||||||||||| Sbjct: 114258 gtcgtctacctgtgccgcgaccccaaggacgcg 114226 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 201 tcctcgccagcttcccaaagtccggcaccacctggctcaaggccctcgccttc 253 ||||||||| | | || ||||||||| | || ||||||||||| ||||||||| Sbjct: 114536 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 114484
>ref|XM_481385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 cagcctcgaccatccgctccgccgccgcaacccgca 321 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 339 cagccacgaccacccgctccgccgcctcaacccgca 374
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 cagcctcgaccatccgctccgccgccgcaacccgca 321 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 111525 cagccacgaccacccgctccgccgcctcaacccgca 111560
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 cagcctcgaccatccgctccgccgccgcaacccgca 321 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 57164 cagccacgaccacccgctccgccgcctcaacccgca 57199
>dbj|AK058698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C01, full insert sequence Length = 1315 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 cagcctcgaccatccgctccgccgccgcaacccgca 321 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 404 cagccacgaccacccgctccgccgcctcaacccgca 439
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 204 tcgccagcttcccaaagtccggcaccacctggctcaaggccct 246 |||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 284871 tcgccagctttcccaagtccggcaccacttggcttaacgccct 284913 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 464 tgcaaggtcgtctacatctgccgcgaccccaaggac 499 ||||||||||| ||||||||| | || ||||||||| Sbjct: 285116 tgcaaggtcgtgtacatctgcagggagcccaaggac 285151
>gb|U33059.1|APU33059 Actinosynnema pretiosum auranticum diaminopimelate decarboxylase (lysA), 3-amino-5-hydroxybenzoic acid synthase, oxidoreductase, phosphatase, and aminodehydroquinate synthase genes, complete cds; transcription activator gene, partial cds; and unknown genes Length = 11905 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 ccgaccacccgccgcgcagcctc 292 ||||||||||||||||||||||| Sbjct: 781 ccgaccacccgccgcgcagcctc 759
>ref|XM_476629.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 294 accatccgctccgccgccgcaacccgcacgactgcgtc 331 |||| ||||||| ||| | ||||||||||||||||||| Sbjct: 62 accacccgctcctccggctcaacccgcacgactgcgtc 99
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0027D12 map near 50283S, complete sequence Length = 128988 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 227 accacctggctcaaggccctcgcctt 252 |||||||||||||| ||||||||||| Sbjct: 36539 accacctggctcaaagccctcgcctt 36514
>dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G02, full insert sequence Length = 1103 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 accacctggctcaaggccctcgcctt 252 |||||||||||||| ||||||||||| Sbjct: 188 accacctggctcaaagccctcgcctt 213
>gb|BC105998.1| Homo sapiens nucleoporin 214kDa, mRNA (cDNA clone MGC:104525 IMAGE:30531438), complete cds Length = 7552 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ctcatctccatgtggctctt 522 |||||||||||||||||||| Sbjct: 7017 ctcatctccatgtggctctt 7036
>ref|XM_481802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3348 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gtggctcttcaccaagaaga 533 |||||||||||||||||||| Sbjct: 2190 gtggctcttcaccaagaaga 2209
>ref|XM_520324.1| PREDICTED: Pan troglodytes similar to nucleoporin 214kDa; nuclear pore complex protein Nup214; CAN protein, putative oncogene; p250; nucleoporin 214kD (CAIN) (LOC464807), mRNA Length = 7071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ctcatctccatgtggctctt 522 |||||||||||||||||||| Sbjct: 6560 ctcatctccatgtggctctt 6579
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ctggcggcggccgccatgga 555 |||||||||||||||||||| Sbjct: 50528 ctggcggcggccgccatgga 50547
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgccgaccacccgccgcgc 286 |||||||||||||||||||| Sbjct: 152540 gcgccgaccacccgccgcgc 152521
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcac 322 |||||||||||||||| ||||||| Sbjct: 5507246 ccgctccgccgccgcatcccgcac 5507223
>ref|XM_001001025.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 5 (Kctd17), mRNA Length = 1233 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_001000984.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 1 (Kctd17), mRNA Length = 921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_001001016.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 4 (Kctd17), mRNA Length = 1297 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_001001003.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_001000989.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 2 (Kctd17), mRNA Length = 915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_990731.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 9 (Kctd17), mRNA Length = 921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_922913.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 7 (Kctd17), mRNA Length = 1574 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_922920.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 8 (Kctd17), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_913834.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 6 (Kctd17), mRNA Length = 915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_993270.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 4 (Kctd17), mRNA Length = 921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_900689.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 2 (Kctd17), mRNA Length = 1574 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_900696.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_110121.8| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 1 (Kctd17), mRNA Length = 915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 326 tggacaaggacatggccgag 345
>ref|XM_976117.1| PREDICTED: Mus musculus TSC22 domain family 2 (Tsc22d2), mRNA Length = 5423 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agaccctggcggcggccgcc 550 |||||||||||||||||||| Sbjct: 359 agaccctggcggcggccgcc 378
>ref|XM_485240.4| PREDICTED: Mus musculus TSC22 domain family 2, transcript variant 1 (Tsc22d2), mRNA Length = 8829 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agaccctggcggcggccgcc 550 |||||||||||||||||||| Sbjct: 359 agaccctggcggcggccgcc 378
>ref|XM_913779.2| PREDICTED: Mus musculus TSC22 domain family 2, transcript variant 1 (Tsc22d2), mRNA Length = 8830 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agaccctggcggcggccgcc 550 |||||||||||||||||||| Sbjct: 359 agaccctggcggcggccgcc 378
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acaaggacatggccgagctc 61 |||||||||||||||||||| Sbjct: 1064266 acaaggacatggccgagctc 1064285
>gb|AC121794.3| Mus musculus BAC clone RP23-413C3 from chromosome 3, complete sequence Length = 195453 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 agaccctggcggcggccgcc 550 |||||||||||||||||||| Sbjct: 129733 agaccctggcggcggccgcc 129714
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgccgaccacccgccgcgc 286 |||||||||||||||||||| Sbjct: 50300 gcgccgaccacccgccgcgc 50281
>ref|NM_020135.2| Homo sapiens Werner helicase interacting protein 1 (WRNIP1), transcript variant 1, mRNA Length = 2670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 179 ggcggcggccgccatggagg 198
>ref|NM_130395.1| Homo sapiens Werner helicase interacting protein 1 (WRNIP1), transcript variant 2, mRNA Length = 2592 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 179 ggcggcggccgccatggagg 198
>emb|AL157938.22| Human DNA sequence from clone RP11-544A12 on chromosome 9q34.13-34.3 Contains the 3' end of the LAMC3 gene for laminin gamma 3, the gene for ionized calcium binding adaptor (IBA2), the NUP214 gene for nucleoporin 214kDa, a novel gene, a ribosomal protein L13a (RPL13A) pseudogene, the gene for a novel protein (FLJ00024) and four CpG islands, complete sequence Length = 197019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ctcatctccatgtggctctt 522 |||||||||||||||||||| Sbjct: 144276 ctcatctccatgtggctctt 144295
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ccgggcatggcggccgcacgcgcg 172 |||||| ||||||||||||||||| Sbjct: 159761 ccgggcctggcggccgcacgcgcg 159784
>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the gene for werners helicase interacting protein (WHIP) (RUVBL), the SERPINB1 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1, a putative novel gene and the 3' end of a putative novel gene, complete sequence Length = 168147 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 69621 ggcggcggccgccatggagg 69640
>emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete genome; segment 8/10 Length = 342300 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ccaccgcgccgaccacccgccgcg 285 ||||||||||||| |||||||||| Sbjct: 258491 ccaccgcgccgactacccgccgcg 258514
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcac 322 |||||||||||||||| ||||||| Sbjct: 50777 ccgctccgccgccgcatcccgcac 50754
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gcatggcggccgcacgcgcg 172 |||||||||||||||||||| Sbjct: 2582509 gcatggcggccgcacgcgcg 2582490
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 caccgcgccgaccacccgcc 282 |||||||||||||||||||| Sbjct: 78004 caccgcgccgaccacccgcc 78023
>dbj|AK094823.1| Homo sapiens cDNA FLJ37504 fis, clone BRAWH2017103, highly similar to Homo sapiens helicase RUVBL mRNA Length = 2458 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 139 ggcggcggccgccatggagg 158
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcac 322 |||||||||||||||| ||||||| Sbjct: 103840 ccgctccgccgccgcatcccgcac 103817
>gb|U15182.1|MLU15182 Mycobacterium leprae cosmid B2266 Length = 40123 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ccaccgcgccgaccacccgccgcg 285 ||||||||||||| |||||||||| Sbjct: 25744 ccaccgcgccgactacccgccgcg 25721
>dbj|AK132430.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632423D15 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 3024 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agaccctggcggcggccgcc 550 |||||||||||||||||||| Sbjct: 171 agaccctggcggcggccgcc 190
>gb|L78822.1|MSGL611CS Mycobacterium leprae cosmid L611 DNA sequence Length = 37769 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ccaccgcgccgaccacccgccgcg 285 ||||||||||||| |||||||||| Sbjct: 8047 ccaccgcgccgactacccgccgcg 8024
>tpg|BK000093.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like D3 gene, complete cds Length = 5547 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gtggctcttcaccaagaaga 533 |||||||||||||||||||| Sbjct: 3186 gtggctcttcaccaagaaga 3205
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgctccgccgccgcaacccgcac 322 |||||||||||||||| ||||||| Sbjct: 5506461 ccgctccgccgccgcatcccgcac 5506438
>dbj|AK223593.1| Homo sapiens mRNA for Werner helicase interacting protein isoform 1 variant, clone: FCC130H09 Length = 2224 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 113 ggcggcggccgccatggagg 132
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tggcggccgcacgcgcgggg 175 |||||||||||||||||||| Sbjct: 4085898 tggcggccgcacgcgcgggg 4085879
>dbj|AK179755.1| Mus musculus cDNA, clone:Y0G0111J18, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000043804, based on BLAT search Length = 416 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 78 tggacaaggacatggccgag 97
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccgccgcgcagcctcgacca 297 |||||||||||||||||||| Sbjct: 5979372 ccgccgcgcagcctcgacca 5979353 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gccgcgaccccaaggacgcg 502 |||||||||||||||||||| Sbjct: 5488800 gccgcgaccccaaggacgcg 5488819 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ccctggcggcggccgccatg 553 |||||||||||||||||||| Sbjct: 303300 ccctggcggcggccgccatg 303319
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 19964 ggcggcggccgccatggagg 19983
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccgccgccgcaacccgcacg 323 |||||||||||||||||||| Sbjct: 132067 ccgccgccgcaacccgcacg 132048
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccgccgccgcaacccgcacg 323 |||||||||||||||||||| Sbjct: 94527 ccgccgccgcaacccgcacg 94508
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gtggctcttcaccaagaaga 533 |||||||||||||||||||| Sbjct: 70664 gtggctcttcaccaagaaga 70645
>dbj|AK108290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D12, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgccgaccacccgccgcgc 286 |||||||||||||||||||| Sbjct: 517 gcgccgaccacccgccgcgc 498
>dbj|AK098959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A20, full insert sequence Length = 1649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 62 ggcggcggccgccatggagg 43
>dbj|AK071977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087E18, full insert sequence Length = 1652 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 65 ggcggcggccgccatggagg 46
>dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F12, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 296 catccgctccgccgccgcaacccgcacgactgcgtc 331 |||||||||| ||| | |||||||||||||||||| Sbjct: 276 catccgctcctccgtcttaacccgcacgactgcgtc 311
>gb|BC018923.2| Homo sapiens Werner helicase interacting protein 1, transcript variant 2, mRNA (cDNA clone MGC:12914 IMAGE:4109718), complete cds Length = 2553 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 140 ggcggcggccgccatggagg 159
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ccacccacatgccctgctcc 427 |||||||||||||||||||| Sbjct: 139996 ccacccacatgccctgctcc 140015
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gcatggcggccgcacgcgcg 172 |||||||||||||||||||| Sbjct: 2605230 gcatggcggccgcacgcgcg 2605211
>emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chromosome 15, complete sequence Length = 166677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tggacaaggacatggccgag 58 |||||||||||||||||||| Sbjct: 147982 tggacaaggacatggccgag 147963
>emb|AJ420413.1|HSA420413 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 901558 Length = 1416 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ctcatctccatgtggctctt 522 |||||||||||||||||||| Sbjct: 855 ctcatctccatgtggctctt 874
>dbj|AB056152.1| Homo sapiens WHIP mRNA for Werner helicase interacting protein, complete cds Length = 2671 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 ggcggcggccgccatggagg 557 |||||||||||||||||||| Sbjct: 180 ggcggcggccgccatggagg 199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,721,584 Number of Sequences: 3902068 Number of extensions: 3721584 Number of successful extensions: 89779 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86998 Number of HSP's gapped (non-prelim): 2774 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
