ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart39b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186423.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 435 ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| |||| Sbjct: 329 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 388 Query: 436 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 495 ||| ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 389 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 448 Query: 496 ccgccggctaccgcctcgctccggagcaccgcctccccgcggccctcgacgatgcggccg 555 ||||||| ||||||||||| || ||||||||||||||||| || ||||||| ||||| | Sbjct: 449 ccgccgggtaccgcctcgcccccgagcaccgcctccccgccgcggtcgacgacgcggcgg 508 Query: 556 gcttcctagagtggctccgcgaacg 580 ||||||| | |||||||| ||||| Sbjct: 509 gcttcctccactggctccgggaacg 533 Score = 107 bits (54), Expect = 4e-20 Identities = 149/180 (82%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 174 aacgtcgtggaggacctctacagcatcctccgtgtactcagcgacggcaccgttgtccgg 233 |||||||| ||||||||| | || ||||||| || ||||||||||||||| | ||||| Sbjct: 118 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 177 Query: 234 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 293 || |||| ||| | ||||||||| |||||||||| ||| ||||| |||||| | Sbjct: 178 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 234 Query: 294 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 353 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 235 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 294 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 129 aacatgccaaccatgccggtcgccgtggctgcctccggcg 168 ||||||||||||||||||| || |||| | ||| |||||| Sbjct: 61 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 100
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Minus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 435 ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| |||| Sbjct: 3384496 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 3384437 Query: 436 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 495 ||| ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 3384436 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 3384377 Query: 496 ccgccggctaccgcctcgctccggagcaccgcctccccgcggccctcgacgatgcggccg 555 ||||||| ||||||||||| || ||||||||||||||||| || ||||||| ||||| | Sbjct: 3384376 ccgccgggtaccgcctcgcccccgagcaccgcctccccgccgcggtcgacgacgcggcgg 3384317 Query: 556 gcttcctagagtggctccgcgaacg 580 ||||||| | |||||||| ||||| Sbjct: 3384316 gcttcctccactggctccgggaacg 3384292 Score = 107 bits (54), Expect = 4e-20 Identities = 149/180 (82%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 174 aacgtcgtggaggacctctacagcatcctccgtgtactcagcgacggcaccgttgtccgg 233 |||||||| ||||||||| | || ||||||| || ||||||||||||||| | ||||| Sbjct: 3384707 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 3384648 Query: 234 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 293 || |||| ||| | ||||||||| |||||||||| ||| ||||| |||||| | Sbjct: 3384647 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 3384591 Query: 294 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 353 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 3384590 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 3384531 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 3378334 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 3378282 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Minus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 3375437 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 3375378 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 3375377 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 3375318 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 3375317 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 3375279 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 459 ctccgcctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccg 518 |||||||||||||||||| | |||||||||||| || || |||||||||||| ||| Sbjct: 3365924 ctccgcctcgccgcggagctccccgccgtcgtgctgtcgttcgactaccgcctcgccccg 3365865 Query: 519 gagcaccgcctccccgc 535 ||||||||||||||||| Sbjct: 3365864 gagcaccgcctccccgc 3365848 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||||||| |||||||||||||||||||| Sbjct: 3393178 ctaccgcctcgctcccgagcaccgcctccccgcggc 3393143 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 3378441 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 3378398 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 ggaggccggcgccgtcgtgctctccg 498 |||||||||||||||||||| ||||| Sbjct: 1867555 ggaggccggcgccgtcgtgcactccg 1867530 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || |||||| |||||||||| Sbjct: 28640442 ctaccgcctcgcgcctgagcactgcctccccgc 28640410 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||||| ||||||| Sbjct: 26730520 ctaccgcctcgcccccgagcaccgcttccccgc 26730488 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 129 aacatgccaaccatgccggtcgccgtggctgcctccggcg 168 ||||||||||||||||||| || |||| | ||| |||||| Sbjct: 3384764 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 3384725
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Minus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 435 ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| |||| Sbjct: 24316 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 24257 Query: 436 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 495 ||| ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 24256 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 24197 Query: 496 ccgccggctaccgcctcgctccggagcaccgcctccccgcggccctcgacgatgcggccg 555 ||||||| ||||||||||| || ||||||||||||||||| || ||||||| ||||| | Sbjct: 24196 ccgccgggtaccgcctcgcccccgagcaccgcctccccgccgcggtcgacgacgcggcgg 24137 Query: 556 gcttcctagagtggctccgcgaacg 580 ||||||| | |||||||| ||||| Sbjct: 24136 gcttcctccactggctccgggaacg 24112 Score = 107 bits (54), Expect = 4e-20 Identities = 149/180 (82%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 174 aacgtcgtggaggacctctacagcatcctccgtgtactcagcgacggcaccgttgtccgg 233 |||||||| ||||||||| | || ||||||| || ||||||||||||||| | ||||| Sbjct: 24527 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 24468 Query: 234 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 293 || |||| ||| | ||||||||| |||||||||| ||| ||||| |||||| | Sbjct: 24467 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 24411 Query: 294 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 353 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 24410 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 24351 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 18154 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 18102 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Minus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 15257 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 15198 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 15197 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 15138 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 15137 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 15099 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 459 ctccgcctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccg 518 |||||||||||||||||| | |||||||||||| || || |||||||||||| ||| Sbjct: 5744 ctccgcctcgccgcggagctccccgccgtcgtgctgtcgttcgactaccgcctcgccccg 5685 Query: 519 gagcaccgcctccccgc 535 ||||||||||||||||| Sbjct: 5684 gagcaccgcctccccgc 5668 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||||||| |||||||||||||||||||| Sbjct: 32998 ctaccgcctcgctcccgagcaccgcctccccgcggc 32963 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 18261 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 18218 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 129 aacatgccaaccatgccggtcgccgtggctgcctccggcg 168 ||||||||||||||||||| || |||| | ||| |||||| Sbjct: 24584 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 24545
>dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F04, full insert sequence Length = 1366 Score = 200 bits (101), Expect = 4e-48 Identities = 179/205 (87%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgt 435 ||||||| |||||||||||| ||| ||| ||||| || ||||||||||||||||| |||| Sbjct: 329 ggaagctaccggtgctcgtctacttccacggcggcgggttctgcctcggctcgtgcacgt 388 Query: 436 gggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctct 495 ||| ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 389 gggccaacgtccactccttctgcctccgcctcgccgcggacgccggcgccgtcgtgctct 448 Query: 496 ccgccggctaccgcctcgctccggagcaccgcctccccgcggccctcgacgatgcggccg 555 ||||||| ||||||||||| || ||||||||||||||||| || ||||||| ||||| | Sbjct: 449 ccgccgggtaccgcctcgcccccgagcaccgcctccccgccgcggtcgacgacgcggcgg 508 Query: 556 gcttcctagagtggctccgcgaacg 580 ||||||| | |||||||| ||||| Sbjct: 509 gcttcctccactggctccgggaacg 533 Score = 107 bits (54), Expect = 4e-20 Identities = 149/180 (82%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 174 aacgtcgtggaggacctctacagcatcctccgtgtactcagcgacggcaccgttgtccgg 233 |||||||| ||||||||| | || ||||||| || ||||||||||||||| | ||||| Sbjct: 118 aacgtcgtcgaggacctcgtcggcttcctccgcgtcctcagcgacggcaccatcctccgg 177 Query: 234 tcaccggaccagccagagttctgcccgatcaccttcccctgcgaccacccttccgtgcag 293 || |||| ||| | ||||||||| |||||||||| ||| ||||| |||||| | Sbjct: 178 tcgccggg---gccggtgttctgcccttccaccttccccgacgagcacccctccgtggaa 234 Query: 294 tggaaggaggccgtctacgataagggcaagaacctccgcgtccgcatgtacaagccgtcg 353 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| Sbjct: 235 tggaaggaggccgtctacgacaagcccaagaacctccatgtccgcatgtacaagccgtcg 294 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 129 aacatgccaaccatgccggtcgccgtggctgcctccggcg 168 ||||||||||||||||||| || |||| | ||| |||||| Sbjct: 61 aacatgccaaccatgccggccgtcgtgtccgccgccggcg 100
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccctc 542 ||||||||||| ||||||| |||||||||||| |||||||||||||||||||| |||||| Sbjct: 18127 gccgtcgtgctttccgccgactaccgcctcgcgccggagcaccgcctccccgcagccctc 18068 Query: 543 gacgatgcggc 553 ||||| ||||| Sbjct: 18067 gacgacgcggc 18057
>ref|XM_469930.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1029 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||| |||||||||| |||||||||||| || ||||||||||||||||| |||| Sbjct: 330 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 389 Query: 542 cgacgatgcggc 553 |||||| ||||| Sbjct: 390 cgacgacgcggc 401
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||| |||||||||| |||||||||||| || ||||||||||||||||| |||| Sbjct: 32547931 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 32547990 Query: 542 cgacgatgcggc 553 |||||| ||||| Sbjct: 32547991 cgacgacgcggc 32548002 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcgacga 547 |||||||||||| |||||| |||||||||||||||| ||||||| Sbjct: 8323666 ctaccgcctcgcgccggagaaccgcctccccgcggcgttcgacga 8323710 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 494 ctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||| || |||||||||||| || ||||||||||||||||| Sbjct: 7983085 ctccgtcgactaccgcctcgcgcccgagcaccgcctccccgc 7983044 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccg 501 |||||||||||||||||||| Sbjct: 4806666 cgccgtcgtgctctccgccg 4806685
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||| |||||||||| |||||||||||| || ||||||||||||||||| |||| Sbjct: 32638441 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 32638500 Query: 542 cgacgatgcggc 553 |||||| ||||| Sbjct: 32638501 cgacgacgcggc 32638512 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcgacga 547 |||||||||||| |||||| |||||||||||||||| ||||||| Sbjct: 8321501 ctaccgcctcgcgccggagaaccgcctccccgcggcgttcgacga 8321545 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 494 ctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||| || |||||||||||| || ||||||||||||||||| Sbjct: 7980920 ctccgtcgactaccgcctcgcgcccgagcaccgcctccccgc 7980879 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccg 501 |||||||||||||||||||| Sbjct: 4806781 cgccgtcgtgctctccgccg 4806800
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||| |||||||||| |||||||||||| || ||||||||||||||||| |||| Sbjct: 81380 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 81439 Query: 542 cgacgatgcggc 553 |||||| ||||| Sbjct: 81440 cgacgacgcggc 81451
>dbj|AK107136.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C10, full insert sequence Length = 1328 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||| |||||||||| |||||||||||| || ||||||||||||||||| |||| Sbjct: 418 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 477 Query: 542 cgacgatgcggc 553 |||||| ||||| Sbjct: 478 cgacgacgcggc 489
>ref|NM_184424.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1232 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 370 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 429 Query: 541 tcgacga 547 ||||||| Sbjct: 430 tcgacga 436 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 269 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 313
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 2957072 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 2957013 Query: 541 tcgacga 547 ||||||| Sbjct: 2957012 tcgacga 2957006 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||||||||| ||||| |||||| | Sbjct: 2954141 cgccgtcgtgctctccgtccagtaccgcctcgccccggagcaccgtctcccggcggccat 2954082 Query: 542 cgacga 547 |||||| Sbjct: 2954081 cgacga 2954076 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||| ||||| |||||| ||||| | Sbjct: 2896263 cgccgtcgtgctctccgtccagtaccgcctcgccccggaacaccgtctccccacggccat 2896322 Query: 542 cgacga 547 |||||| Sbjct: 2896323 cgacga 2896328 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcga 544 ||||| ||||| ||| |||||||||||||||||||| ||||| Sbjct: 39628547 ctaccacctcgttccagagcaccgcctccccgcggcgctcga 39628588 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cgtcgtgctctccgccggctac 506 |||||||||||||||||||||| Sbjct: 24331489 cgtcgtgctctccgccggctac 24331510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccg 501 ||||||||||||||||||||| Sbjct: 40556153 gcgccgtcgtgctctccgccg 40556173 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 2957173 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 2957129
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 38589 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 38530 Query: 541 tcgacga 547 ||||||| Sbjct: 38529 tcgacga 38523 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||||||||| ||||| |||||| | Sbjct: 35658 cgccgtcgtgctctccgtccagtaccgcctcgccccggagcaccgtctcccggcggccat 35599 Query: 542 cgacga 547 |||||| Sbjct: 35598 cgacga 35593 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 38690 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 38646
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 164070 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 164011 Query: 541 tcgacga 547 ||||||| Sbjct: 164010 tcgacga 164004 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||||||||| ||||| |||||| | Sbjct: 161139 cgccgtcgtgctctccgtccagtaccgcctcgccccggagcaccgtctcccggcggccat 161080 Query: 542 cgacga 547 |||||| Sbjct: 161079 cgacga 161074 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||| ||||| |||||| ||||| | Sbjct: 103261 cgccgtcgtgctctccgtccagtaccgcctcgccccggaacaccgtctccccacggccat 103320 Query: 542 cgacga 547 |||||| Sbjct: 103321 cgacga 103326 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 164171 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 164127
>dbj|AK073659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053C20, full insert sequence Length = 1231 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 369 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 428 Query: 541 tcgacga 547 ||||||| Sbjct: 429 tcgacga 435 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 268 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 312
>dbj|AK060305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A09, full insert sequence Length = 1274 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccc 540 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 368 gcgccgtcgtgctctccgccgactaccgcctcggccccgagcaccgcctccccgccgcca 427 Query: 541 tcgacga 547 ||||||| Sbjct: 428 tcgacga 434 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttctgcctcgg 424 |||||||||||||||| || ||| ||||| |||| ||||||||| Sbjct: 267 gctgccggtgctcgtctgcttccacggcggcggctactgcctcgg 311
>ref|NM_186422.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 370 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 422 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
>ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.153 mRNA Length = 1772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 370 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 422 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full insert sequence Length = 1772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 370 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 422 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full insert sequence Length = 1189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 370 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 422 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 263 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 306
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct: 188027 gccgtcgtgctctccgccgactaccgcctcgcccccgagcaccgcctccccgc 187975 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Minus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 185130 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 185071 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 185070 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 185011 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 185010 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 184972 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 459 ctccgcctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccg 518 |||||||||||||||||| | |||||||||||| || || |||||||||||| ||| Sbjct: 175617 ctccgcctcgccgcggagctccccgccgtcgtgctgtcgttcgactaccgcctcgccccg 175558 Query: 519 gagcaccgcctccccgc 535 ||||||||||||||||| Sbjct: 175557 gagcaccgcctccccgc 175541 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 376 ggaagctgccggtgctcgtccactaccatggcgggggcttctgc 419 ||||||| |||||||||||| ||| ||| ||||| ||||||||| Sbjct: 188134 ggaagcttccggtgctcgtctacttccacggcggcggcttctgc 188091
>ref|NM_186421.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 303 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 362 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 363 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 422 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 423 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 461
>ref|XM_507352.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA Length = 1375 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 432 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 470
>ref|XM_506173.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA Length = 1378 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 432 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 470
>dbj|AK106142.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G10, full insert sequence Length = 1199 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 303 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 362 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 363 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 422 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 423 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 461
>dbj|AK106008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A09, full insert sequence Length = 1375 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 432 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 470
>dbj|AK061530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E02, full insert sequence Length = 1377 Score = 77.8 bits (39), Expect = 4e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 377 gaagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcgtgtacgtg 436 ||||||||||||| | || ||| ||||||||| ||||||||| ||||||| || || || Sbjct: 312 gaagctgccggtggtggtgtacttccatggcggcggcttctgcatcggctcctgcacctg 371 Query: 437 ggggaacatccacagcttctgtctccgcctcgccgcggaggccggcgccgtcgtgctctc 496 | ||| ||||| | ||| |||||||||||||| ||| | |||||| |||||||| Sbjct: 372 gcccaacttccacgccggctgcctccgcctcgccgccgagctccccgccgtggtgctctc 431 Query: 497 cgccggctaccgcctcgctccggagcaccgcctccccgc 535 | || |||||||||||| |||||||||||||| ||||| Sbjct: 432 cttcgactaccgcctcgcgccggagcaccgcctgcccgc 470
>gb|BT017391.1| Zea mays clone EL01N0327F05.c mRNA sequence Length = 1246 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 483 gccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccctc 542 ||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 395 gccgtggtgctctccgccgactaccgcctggccccggagcaccggctccccgcggcgctc 454 Query: 543 ga 544 || Sbjct: 455 ga 456
>ref|NM_186419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 459 ctccgcctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccg 518 |||||||||||||||||| | |||||||||||| || || |||||||||||| ||| Sbjct: 365 ctccgcctcgccgcggagctccccgccgtcgtgctgtcgttcgactaccgcctcgccccg 424 Query: 519 gagcaccgcctccccgc 535 ||||||||||||||||| Sbjct: 425 gagcaccgcctccccgc 441
>dbj|AK060082.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D11, full insert sequence Length = 1248 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 459 ctccgcctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccg 518 |||||||||||||||||| | |||||||||||| || || |||||||||||| ||| Sbjct: 365 ctccgcctcgccgcggagctccccgccgtcgtgctgtcgttcgactaccgcctcgccccg 424 Query: 519 gagcaccgcctccccgc 535 ||||||||||||||||| Sbjct: 425 gagcaccgcctccccgc 441
>ref|NM_186425.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||||||| |||||||||||||||||||| Sbjct: 534 ctaccgcctcgctcccgagcaccgcctccccgcggc 569
>dbj|AK106266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G01, full insert sequence Length = 1559 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||||||| |||||||||||||||||||| Sbjct: 534 ctaccgcctcgctcccgagcaccgcctccccgcggc 569
>ref|NM_184413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 482 cgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggccct 541 ||||||||||||||||| | ||||||||||| ||||| ||||| |||||| ||||| | Sbjct: 405 cgccgtcgtgctctccgtccagtaccgcctcgccccggaacaccgtctccccacggccat 464 Query: 542 cgacga 547 |||||| Sbjct: 465 cgacga 470
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcgacga 547 |||||||||||| |||||| |||||||||||||||| ||||||| Sbjct: 60922 ctaccgcctcgcgccggagaaccgcctccccgcggcgttcgacga 60966
>dbj|AK100934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136E13, full insert sequence Length = 1525 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcgacga 547 |||||||||||| |||||| |||||||||||||||| ||||||| Sbjct: 538 ctaccgcctcgcgccggagaaccgcctccccgcggcgttcgacga 582
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 466 tcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagcacc 525 ||||||| | |||||||| ||||||| | |||| || |||||||||||| |||||||||| Sbjct: 17363055 tcgccgccgcggccggcgtcgtcgtggtgtccgtcgactaccgcctcgccccggagcacc 17363114 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 464 cctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagca 523 ||||||||||| |||||| | | |||| | |||| || |||||| ||||| |||||||| Sbjct: 17359983 cctcgccgcggcggccggtgtcctcgtcgtgtccgtcgactaccggctcgccccggagca 17360042 Query: 524 ccgcctccccgcgg 537 || |||||||||| Sbjct: 17360043 cccgctccccgcgg 17360056 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 493 tctccgccggctaccgcctcgctccggagcaccgcctccccgcggc 538 |||||| || ||||||||||||||| ||||||| ||||| ||||| Sbjct: 17117756 tctccgtcgactaccgcctcgctcccgagcacctgctcccggcggc 17117711 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 401 ccatggcgggggcttctgcctcggctcg 428 |||||| || |||||||||||||||||| Sbjct: 17418105 ccatggaggcggcttctgcctcggctcg 17418132 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 504 taccgcctcgctccggagcaccgcctccccgc 535 ||||||||||| || ||||||| ||||||||| Sbjct: 17417168 taccgcctcgcgcccgagcaccccctccccgc 17417137 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgc 535 ||||||||||| |||||||||| | ||||||| Sbjct: 17373188 taccgcctcgcgccggagcaccccgtccccgc 17373219
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 466 tcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagcacc 525 ||||||| | |||||||| ||||||| | |||| || |||||||||||| |||||||||| Sbjct: 86968 tcgccgccgcggccggcgtcgtcgtggtgtccgtcgactaccgcctcgccccggagcacc 87027 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 464 cctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagca 523 ||||||||||| |||||| | | |||| | |||| || |||||| ||||| |||||||| Sbjct: 83896 cctcgccgcggcggccggtgtcctcgtcgtgtccgtcgactaccggctcgccccggagca 83955 Query: 524 ccgcctccccgcgg 537 || |||||||||| Sbjct: 83956 cccgctccccgcgg 83969 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 401 ccatggcgggggcttctgcctcggctcg 428 |||||| || |||||||||||||||||| Sbjct: 142018 ccatggaggcggcttctgcctcggctcg 142045 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 504 taccgcctcgctccggagcaccgcctccccgc 535 ||||||||||| || ||||||| ||||||||| Sbjct: 141081 taccgcctcgcgcccgagcaccccctccccgc 141050 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgc 535 ||||||||||| |||||||||| | ||||||| Sbjct: 97101 taccgcctcgcgccggagcaccccgtccccgc 97132
>dbj|AK073449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C15, full insert sequence Length = 1108 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 466 tcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagcacc 525 ||||||| | |||||||| ||||||| | |||| || |||||||||||| |||||||||| Sbjct: 595 tcgccgccgcggccggcgtcgtcgtggtgtccgtcgactaccgcctcgccccggagcacc 536
>dbj|AK067180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M19, full insert sequence Length = 1117 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 466 tcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagcacc 525 ||||||| | |||||||| ||||||| | |||| || |||||||||||| |||||||||| Sbjct: 367 tcgccgccgcggccggcgtcgtcgtggtgtccgtcgactaccgcctcgccccggagcacc 426
>ref|XM_482929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 320 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 370 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 446 taccgcctcgcgccggagcaccccgtcccggcggcc 481
>ref|XM_507269.1| PREDICTED Oryza sativa (japonica cultivar-group), P0451G12.24 mRNA Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 322 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 372 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 448 taccgcctcgcgccggagcaccccgtcccggcggcc 483
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 23411819 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 23411869 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||| || || ||||||||||||||||| Sbjct: 27467397 ctaccgccttgcgcccgagcaccgcctccccgc 27467365 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||||||| |||||||| Sbjct: 23402044 ctaccgcctcgcgccggagcacccgctccccgc 23402012 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 23411945 taccgcctcgcgccggagcaccccgtcccggcggcc 23411980
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 5846861 taccgcctcgcgccggagcaccacctccccgcggc 5846895 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 479 cggcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||| || |||||||||||| || |||||||| ||||||| Sbjct: 11429580 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgc 11429636
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 93656 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 93706 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||||||| |||||||| Sbjct: 83881 ctaccgcctcgcgccggagcacccgctccccgc 83849 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 93782 taccgcctcgcgccggagcaccccgtcccggcggcc 93817
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 162390 taccgcctcgcgccggagcaccacctccccgcggc 162424
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 47636 taccgcctcgcgccggagcaccacctccccgcggc 47670
>dbj|AK109407.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C01, full insert sequence Length = 1270 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 435 taccgcctcgcgccggagcaccacctccccgcggc 469
>dbj|AK109351.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G08, full insert sequence Length = 1265 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 430 taccgcctcgcgccggagcaccacctccccgcggc 464
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 3234 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 3284 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 3360 taccgcctcgcgccggagcaccccgtcccggcggcc 3395
>dbj|AK098967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084E12, full insert sequence Length = 1264 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 433 taccgcctcgcgccggagcaccacctccccgcggc 467
>dbj|AK073975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F03, full insert sequence Length = 1377 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 320 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 370 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 446 taccgcctcgcgccggagcaccccgtcccggcggcc 481
>dbj|AK070299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F19, full insert sequence Length = 1315 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggc 538 ||||||||||| |||||||||| |||||||||||| Sbjct: 484 taccgcctcgcgccggagcaccacctccccgcggc 518
>dbj|AK060706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H02, full insert sequence Length = 1426 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 378 aagctgccggtgctcgtccactaccatggcgggggcttctgcctcggctcg 428 ||||| || ||||||||| ||||||| ||||| || ||||||||||||||| Sbjct: 322 aagctccccgtgctcgtctactaccacggcggcgggttctgcctcggctcg 372 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgcggcc 539 ||||||||||| |||||||||| | |||| |||||| Sbjct: 448 taccgcctcgcgccggagcaccccgtcccggcggcc 483
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 494 ctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 ||||| || |||||||||||| || ||||||||||||||||| Sbjct: 50448 ctccgtcgactaccgcctcgcgcccgagcaccgcctccccgc 50407
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgcggccctcga 544 ||||| ||||| ||| |||||||||||||||||||| ||||| Sbjct: 109503 ctaccacctcgttccagagcaccgcctccccgcggcgctcga 109544
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 1744731 ctcgcgccggagcaccgcctccccgccgccatcgacg 1744767
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 479 cggcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||| || |||||||||||| || |||||||| ||||||| Sbjct: 117289 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgc 117345
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 479 cggcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||| || |||||||||||| || |||||||| ||||||| Sbjct: 445 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgc 501
>dbj|AK101030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150J02, full insert sequence Length = 1467 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 682 ctcgcgccggagcaccgcctccccgccgccatcgacg 646
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 479 cggcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||| || |||||||||||| || |||||||| ||||||| Sbjct: 457 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgc 513
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 479 cggcgccgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||| || |||||||||||| || |||||||| ||||||| Sbjct: 482 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgc 538
>dbj|AK061124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G09, full insert sequence Length = 1278 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 453 ctcgcgccggagcaccgcctccccgccgccatcgacg 489
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 1744708 ctcgcgccggagcaccgcctccccgccgccatcgacg 1744744
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 95752 ctcgcgccggagcaccgcctccccgccgccatcgacg 95716
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||||||||| ||| |||||| Sbjct: 22190 ctcgcgccggagcaccgcctccccgccgccatcgacg 22154
>ref|XM_463600.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 509 cctcgctccggagcaccgcctccccgcggccctcga 544 ||||| ||| |||||||||||||||||||| ||||| Sbjct: 397 cctcgttccagagcaccgcctccccgcggcgctcga 362
>ref|NM_192768.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1728 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cgtcgtgctctccgccggctac 506 |||||||||||||||||||||| Sbjct: 948 cgtcgtgctctccgccggctac 969
>ref|XM_359910.1| Magnaporthe grisea 70-15 hypothetical protein (MG04867.4) partial mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 485 cgtcgtgctctccgccggctaccgcctcgctccggagcaccgcctccccgcggc 538 ||||||| || || ||| |||||||||||| || ||||||| | |||||||||| Sbjct: 462 cgtcgtggtcaccaccgactaccgcctcgcgcccgagcaccccttccccgcggc 515
>gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 32896 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 537 gccctcgacgatgcggccggcttcct 562 ||||| |||||||||||||||||||| Sbjct: 28678 gccctggacgatgcggccggcttcct 28653
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 539 cctcgacgatgcggccggcttc 560 |||||||||||||||||||||| Sbjct: 76055 cctcgacgatgcggccggcttc 76076
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 ctcgccgcggaggccggcgccg 486 |||||||||||||||||||||| Sbjct: 80135 ctcgccgcggaggccggcgccg 80156
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 465 ctcgccgcggaggccggcgccg 486 |||||||||||||||||||||| Sbjct: 4105441 ctcgccgcggaggccggcgccg 4105462
>gb|AF110333.2|AF110333 Pinus radiata PrMC3 mRNA, complete cds Length = 1108 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 507 cgcctcgctccggagcaccgcctccccgcggccctcgacgat 548 |||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 379 cgcctcgcgcccgagcaccgcctccccgccgcctacgacgat 420
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cgtcgtgctctccgccggctac 506 |||||||||||||||||||||| Sbjct: 77393 cgtcgtgctctccgccggctac 77414
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 493 tctccgccggctaccgcctcgctccggagcaccgcctccccgcggc 538 |||||| || ||||||||||||||| ||||||| ||||| ||||| Sbjct: 58513 tctccgtcgactaccgcctcgctcccgagcacctgctcccggcggc 58468
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 493 tctccgccggctaccgcctcgctccggagcaccgcctccccgcggc 538 |||||| || ||||||||||||||| ||||||| ||||| ||||| Sbjct: 111415 tctccgtcgactaccgcctcgctcccgagcacctgctcccggcggc 111370
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 ggaggccggcgccgtcgtgctctccg 498 |||||||||||||||||||| ||||| Sbjct: 72134 ggaggccggcgccgtcgtgcactccg 72109
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 ggaggccggcgccgtcgtgctctccg 498 |||||||||||||||||||| ||||| Sbjct: 119774 ggaggccggcgccgtcgtgcactccg 119749
>dbj|AK073439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044H02, full insert sequence Length = 1988 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 ctcgccgcggaggccggcgccg 486 |||||||||||||||||||||| Sbjct: 172 ctcgccgcggaggccggcgccg 151
>dbj|AK073204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022O11, full insert sequence Length = 1701 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 ggaggccggcgccgtcgtgctctccg 498 |||||||||||||||||||| ||||| Sbjct: 254 ggaggccggcgccgtcgtgcactccg 279
>dbj|AK071569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102G04, full insert sequence Length = 1519 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 464 cctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagca 523 ||||||||||| |||||| | | |||| | |||| || |||||| ||||| |||||||| Sbjct: 549 cctcgccgcggcggccggtgtcctcgtcgtgtccgtcgactaccggctcgccccggagca 608 Query: 524 ccgcctccccgcgg 537 || |||||||||| Sbjct: 609 cccgctccccgcgg 622
>dbj|AK070294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O07, full insert sequence Length = 1333 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 464 cctcgccgcggaggccggcgccgtcgtgctctccgccggctaccgcctcgctccggagca 523 ||||||||||| |||||| | | |||| | |||| || |||||| ||||| |||||||| Sbjct: 546 cctcgccgcggcggccggtgtcctcgtcgtgtccgtcgactaccggctcgccccggagca 605 Query: 524 ccgcctccccgcgg 537 || |||||||||| Sbjct: 606 cccgctccccgcgg 619
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 493 tctccgccggctaccgcctcgctccggagcaccgcctccccgcggc 538 |||||| || ||||||||||||||| ||||||| ||||| ||||| Sbjct: 409 tctccgtcgactaccgcctcgctcccgagcacctgctcccggcggc 454
>ref|XM_483651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||| || || ||||||||||||||||| Sbjct: 404 ctaccgccttgcgcccgagcaccgcctccccgc 436
>ref|XM_482926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| |||||||||| |||||||| Sbjct: 336 ctaccgcctcgcgccggagcacccgctccccgc 368
>ref|XM_462670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 493 tctccgccggctaccgcctcgctccggagcacc 525 |||||| || |||||||||||| |||||||||| Sbjct: 338 tctccgtcgactaccgcctcgccccggagcacc 370
>ref|NM_197696.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0014I11.15), mRNA Length = 816 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||| ||||||||| Sbjct: 552 ctaccgcctcgcgcccgagcaccacctccccgc 584
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 gctgccggtgctcgtccactaccatggcgggggcttc 416 |||||| | ||||||| ||||||||||||| |||||| Sbjct: 2243550 gctgcccgcgctcgtctactaccatggcggcggcttc 2243514
>ref|XM_463670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccg 501 ||||||||||||||||||||| Sbjct: 209 gcgccgtcgtgctctccgccg 229
>ref|XM_479518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || |||||| |||||||||| Sbjct: 522 ctaccgcctcgcgcctgagcactgcctccccgc 554
>ref|NM_188838.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||||| ||||||| Sbjct: 464 ctaccgcctcgcccccgagcaccgcttccccgc 496
>ref|XM_425792.1| PREDICTED: Gallus gallus similar to Transmembrane protein 24 (DLNB23 protein) (LOC428233), partial mRNA Length = 2395 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 cggagcaccgcctccccgcgg 537 ||||||||||||||||||||| Sbjct: 252 cggagcaccgcctccccgcgg 232
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 22819 ctcgcgccggagcaccgcctacccgccgccatcgacg 22855
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 cgccggctaccgcctcgctcc 517 ||||||||||||||||||||| Sbjct: 147250 cgccggctaccgcctcgctcc 147230
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||| ||||||||| Sbjct: 30100 ctaccgcctcgcgcccgagcaccacctccccgc 30068
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 442 acatccacagcttctgtctccgcct 466 |||||| |||||||||||||||||| Sbjct: 1840 acatccccagcttctgtctccgcct 1816
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ccgcggaggccggcgccgtcg 489 ||||||||||||||||||||| Sbjct: 521611 ccgcggaggccggcgccgtcg 521591
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 493 tctccgccggctaccgcctcgctccggagcacc 525 |||||| || |||||||||||| |||||||||| Sbjct: 22386890 tctccgtcgactaccgcctcgccccggagcacc 22386922
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 1804989 ctcgcgccggagcaccgcctacccgccgccatcgacg 1805025 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 cgcctcgccgcggaggccggcgcc 485 |||||||||| ||||||||||||| Sbjct: 28352924 cgcctcgccgaggaggccggcgcc 28352947 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 9656258 gcctcgccgcggcggccggcgccg 9656281
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||| ||||||||| Sbjct: 21304259 ctaccgcctcgcgcccgagcaccacctccccgc 21304291
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccg 501 ||||||||||||||||||||| Sbjct: 117777 gcgccgtcgtgctctccgccg 117797
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||||| ||||||| Sbjct: 77377 ctaccgcctcgcccccgagcaccgcttccccgc 77345
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || |||||| |||||||||| Sbjct: 106400 ctaccgcctcgcgcctgagcactgcctccccgc 106368
>gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the complete genome Length = 13219 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 agcaggccggccggaagctgc 384 ||||||||||||||||||||| Sbjct: 4979 agcaggccggccggaagctgc 4999
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||| || || ||||||||||||||||| Sbjct: 94192 ctaccgccttgcgcccgagcaccgcctccccgc 94160
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||| || || ||||||||||||||||| Sbjct: 30646 ctaccgccttgcgcccgagcaccgcctccccgc 30614
>dbj|AK109471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E06, full insert sequence Length = 1365 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccg 501 ||||||||||||||||||||| Sbjct: 262 gcgccgtcgtgctctccgccg 282
>dbj|AK109004.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H02, full insert sequence Length = 1684 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||||| ||||||| Sbjct: 464 ctaccgcctcgcccccgagcaccgcttccccgc 496
>dbj|AK106054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F06, full insert sequence Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 ||||||||| || || ||||||||||||||||| Sbjct: 404 ctaccgccttgcgcccgagcaccgcctccccgc 436
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || |||||| |||||||||| Sbjct: 15612 ctaccgcctcgcgcctgagcactgcctccccgc 15580
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ggcggtgagcaggccggccgg 377 ||||||||||||||||||||| Sbjct: 4893917 ggcggtgagcaggccggccgg 4893897
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 503 ctaccgcctcgctccggagcaccgcctccccgc 535 |||||||||||| || ||||||| ||||||||| Sbjct: 21315523 ctaccgcctcgcgcccgagcaccacctccccgc 21315555
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 510 ctcgctccggagcaccgcctccccgcggccctcgacg 546 ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 1802710 ctcgcgccggagcaccgcctacccgccgccatcgacg 1802746 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 cgcctcgccgcggaggccggcgcc 485 |||||||||| ||||||||||||| Sbjct: 28335373 cgcctcgccgaggaggccggcgcc 28335396 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 9727955 gcctcgccgcggcggccggcgccg 9727978
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 493 tctccgccggctaccgcctcgctccggagcacc 525 |||||| || |||||||||||| |||||||||| Sbjct: 137794 tctccgtcgactaccgcctcgccccggagcacc 137826
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gcgccgtcgtgctctccgccg 501 ||||||||||||||||||||| Sbjct: 36168 gcgccgtcgtgctctccgccg 36188
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 93419 gcctcgccgcggcggccggcgccg 93396
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 cgcctcgccgcggaggccggcgcc 485 |||||||||| ||||||||||||| Sbjct: 83546 cgcctcgccgaggaggccggcgcc 83569
>gb|DQ150097.1| Triticum aestivum pyridoxine biosynthesis protein mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 cgcctcgccgcggaggccggcgcc 485 |||||||||| ||||||||||||| Sbjct: 157 cgcctcgccgaggaggccggcgcc 180
>gb|AF212184.1| Nicotiana tabacum cell death associated protein (hsr203J) gene, complete cds Length = 1184 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 cctcgctccggagcaccgcctccc 532 |||||| ||||||||||||||||| Sbjct: 460 cctcgcgccggagcaccgcctccc 483
>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete sequence Length = 199646 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 atagctagcagcattttctgttatttct 76 ||||||||||||||||| ||||| |||| Sbjct: 37979 atagctagcagcattttttgttaattct 37952
>emb|AL606519.6| Human DNA sequence from clone RP11-339D23 on chromosome 1 Contains a novel gene, complete sequence Length = 75939 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cattttctgttatttctaat 79 |||||||||||||||||||| Sbjct: 30338 cattttctgttatttctaat 30357
>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the CDYL gene for a Y chromosome-like chromodomain protein, a ribosomal protein S18 (RPS18) pseudogene, the gene for ribonuclease P 40kD subunit (RPP40) and CpG islands, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tttcctttccctcttactaa 35 |||||||||||||||||||| Sbjct: 120177 tttcctttccctcttactaa 120158
>gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, complete sequence Length = 159205 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 agctagcagcattttctgtt 70 |||||||||||||||||||| Sbjct: 138784 agctagcagcattttctgtt 138765
>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7 Length = 349464 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcagcattttctgttatttc 75 |||||||||||||||||||| Sbjct: 2400 gcagcattttctgttatttc 2419
>dbj|AB242144.1| Argiope bruennichi CySp1 mRNA for egg case silk protein 1, complete cds Length = 9149 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 accagccagagttctgcccgatca 264 |||||||||||| ||||||||||| Sbjct: 2648 accagccagagtgctgcccgatca 2671
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 ggccctcgacgatgcggccg 555 |||||||||||||||||||| Sbjct: 4804890 ggccctcgacgatgcggccg 4804871
>gb|AF213908.1| Influenza A virus (A/Swine/Italy/25823/94(H3N2)) segment 8 non-structural protein (NS) gene, partial cds Length = 294 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 attttctgttatttctaatc 80 |||||||||||||||||||| Sbjct: 195 attttctgttatttctaatc 176
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cgccgtcgtgctctccgccg 501 |||||||||||||||||||| Sbjct: 28789 cgccgtcgtgctctccgccg 28770
>ref|NM_064210.2| Caenorhabditis elegans C50E10.1 (C50E10.1) mRNA, complete cds Length = 506 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tactaaccctttcgactaca 49 |||||||||||||||||||| Sbjct: 4 tactaaccctttcgactaca 23
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ggccctcgacgatgcggccg 555 |||||||||||||||||||| Sbjct: 1550988 ggccctcgacgatgcggccg 1551007
>gb|AC154904.4| Mus musculus BAC clone RP23-416C3 from chromosome 12, complete sequence Length = 194547 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 atagctagcagcattttctgttatttct 76 ||||||||||||||||| ||||| |||| Sbjct: 175838 atagctagcagcattttttgttaattct 175811
>gb|AF157014.1|AF157014 Mus musculus Pax-5 protein gene, partial cds Length = 1866 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 accttcccctgcgaccaccc 283 |||||||||||||||||||| Sbjct: 431 accttcccctgcgaccaccc 450
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggcggcggtgagcaggccgg 373 |||||||||||||||||||| Sbjct: 566411 ggcggcggtgagcaggccgg 566430
>emb|X77136.1|NTHSR203 N.tabacum hrs203J gene Length = 2778 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 cctcgctccggagcaccgcctccc 532 |||||| ||||||||||||||||| Sbjct: 1778 cctcgcgccggagcaccgcctccc 1801
>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full insert sequence Length = 938 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 47 gcctcgccgcggcggccggcgccg 70
>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full insert sequence Length = 896 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 62 gcctcgccgcggcggccggcgccg 85
>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full insert sequence Length = 954 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gcctcgccgcggaggccggcgccg 486 |||||||||||| ||||||||||| Sbjct: 51 gcctcgccgcggcggccggcgccg 74
>dbj|AK064734.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C05, full insert sequence Length = 1162 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 504 taccgcctcgctccggagcaccgcctccccgc 535 ||||||||||| || ||||||| ||||||||| Sbjct: 391 taccgcctcgcgcccgagcaccccctccccgc 422
>gb|AF098988.4| Caenorhabditis elegans cosmid C50E10, complete sequence Length = 43461 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tactaaccctttcgactaca 49 |||||||||||||||||||| Sbjct: 1322 tactaaccctttcgactaca 1303
>dbj|AK063409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A12, full insert sequence Length = 1259 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 cgcctcgccgcggaggccggcgcc 485 |||||||||| ||||||||||||| Sbjct: 211 cgcctcgccgaggaggccggcgcc 234
>dbj|AB091430.1| Nicotiana tabacum mRNA for hsr203J, complete cds Length = 1008 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 cctcgctccggagcaccgcctccc 532 |||||| ||||||||||||||||| Sbjct: 366 cctcgcgccggagcaccgcctccc 389
>dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727A23, complete sequence Length = 174905 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ttctgttatttctaatcgca 83 |||||||||||||||||||| Sbjct: 172280 ttctgttatttctaatcgca 172261
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cgccgcggaggccggcgccg 486 |||||||||||||||||||| Sbjct: 2038834 cgccgcggaggccggcgccg 2038853
>gb|AC139149.6| Homo sapiens chromosome 17, clone RP13-766D20, complete sequence Length = 81577 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 gcctcgccgcggaggccggcgccg 486 ||||||||||||||||| |||||| Sbjct: 43474 gcctcgccgcggaggcccgcgccg 43451
>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete sequence Length = 206709 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 accttcccctgcgaccaccc 283 |||||||||||||||||||| Sbjct: 191717 accttcccctgcgaccaccc 191698
>emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clones, complete sequence Length = 100887 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 476 ggccggcgccgtcgtgctctccgccggc 503 ||||| ||||| |||||||||||||||| Sbjct: 40331 ggccgacgccggcgtgctctccgccggc 40358
>emb|AJ342831.1|HSA342831 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GB4R Length = 752 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 gcctcgccgcggaggccggcgccg 486 ||||||||||||||||| |||||| Sbjct: 64 gcctcgccgcggaggcccgcgccg 41
>dbj|AP002906.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1589B1 Length = 162728 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tgagaagctttcctttccct 27 |||||||||||||||||||| Sbjct: 61042 tgagaagctttcctttccct 61061 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,546,860 Number of Sequences: 3902068 Number of extensions: 3546860 Number of successful extensions: 75333 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73003 Number of HSP's gapped (non-prelim): 2330 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
