Clone Name | bart39a11 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 428 bits (216), Expect = e-117 Identities = 327/364 (89%) Strand = Plus / Minus Query: 96 tcctcccttcccacgccacagcgacggagccaaccggcatgcttgagcgggaaaccaagc 155 ||||||||| |||||||| |||||| ||| || |||| | | ||||||| || |||| Sbjct: 7652273 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 7652214 Query: 156 agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 215 |||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 7652213 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 7652154 Query: 216 cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 275 ||||||| ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 7652153 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 7652094 Query: 276 gcctcggagccgacttctgctacatcgagattctcgacaccaccgagccgggcgcggagg 335 ||||||| ||||||||||||||| | ||| | ||||||||| | || || |||||||||| Sbjct: 7652093 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 7652034 Query: 336 ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 395 |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 7652033 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 7651974 Query: 396 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcagtgtggcacacacacg 455 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 7651973 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 7651914 Query: 456 acac 459 |||| Sbjct: 7651913 acac 7651910
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 428 bits (216), Expect = e-117 Identities = 327/364 (89%) Strand = Plus / Plus Query: 96 tcctcccttcccacgccacagcgacggagccaaccggcatgcttgagcgggaaaccaagc 155 ||||||||| |||||||| |||||| ||| || |||| | | ||||||| || |||| Sbjct: 63017 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 63076 Query: 156 agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 215 |||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 63077 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 63136 Query: 216 cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 275 ||||||| ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 63137 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 63196 Query: 276 gcctcggagccgacttctgctacatcgagattctcgacaccaccgagccgggcgcggagg 335 ||||||| ||||||||||||||| | ||| | ||||||||| | || || |||||||||| Sbjct: 63197 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 63256 Query: 336 ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 395 |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 63257 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 63316 Query: 396 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcagtgtggcacacacacg 455 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 63317 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 63376 Query: 456 acac 459 |||| Sbjct: 63377 acac 63380
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 428 bits (216), Expect = e-117 Identities = 327/364 (89%) Strand = Plus / Minus Query: 96 tcctcccttcccacgccacagcgacggagccaaccggcatgcttgagcgggaaaccaagc 155 ||||||||| |||||||| |||||| ||| || |||| | | ||||||| || |||| Sbjct: 7650108 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 7650049 Query: 156 agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 215 |||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 7650048 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 7649989 Query: 216 cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 275 ||||||| ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 7649988 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 7649929 Query: 276 gcctcggagccgacttctgctacatcgagattctcgacaccaccgagccgggcgcggagg 335 ||||||| ||||||||||||||| | ||| | ||||||||| | || || |||||||||| Sbjct: 7649928 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 7649869 Query: 336 ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 395 |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 7649868 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 7649809 Query: 396 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcagtgtggcacacacacg 455 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 7649808 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 7649749 Query: 456 acac 459 |||| Sbjct: 7649748 acac 7649745
>dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A07, full insert sequence Length = 1269 Score = 428 bits (216), Expect = e-117 Identities = 327/364 (89%) Strand = Plus / Plus Query: 96 tcctcccttcccacgccacagcgacggagccaaccggcatgcttgagcgggaaaccaagc 155 ||||||||| |||||||| |||||| ||| || |||| | | ||||||| || |||| Sbjct: 163 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 222 Query: 156 agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 215 |||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 223 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 282 Query: 216 cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 275 ||||||| ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 283 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 342 Query: 276 gcctcggagccgacttctgctacatcgagattctcgacaccaccgagccgggcgcggagg 335 ||||||| ||||||||||||||| | ||| | ||||||||| | || || |||||||||| Sbjct: 343 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 402 Query: 336 ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 395 |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 403 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 462 Query: 396 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcagtgtggcacacacacg 455 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 463 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 522 Query: 456 acac 459 |||| Sbjct: 523 acac 526
>ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNAa0034B05.10), mRNA Length = 1125 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 157 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 216 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 217 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 264 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 321 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 380 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 381 ctcgtggcacgggctggaggtgttcgacgg 410
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 33196 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 33255 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 33256 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 33303 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 33360 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 33419 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 33420 ctcgtggcacgggctggaggtgttcgacgg 33449
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 98851 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 98910 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 98911 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 98958 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 99015 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 99074 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 99075 ctcgtggcacgggctggaggtgttcgacgg 99104
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 3442067 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 3442126 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 3442127 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 3442174 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 3442231 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 3442290 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 3442291 ctcgtggcacgggctggaggtgttcgacgg 3442320
>dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H05, full insert sequence Length = 1436 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 231 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 290 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 291 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 338 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 395 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 454 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 455 ctcgtggcacgggctggaggtgttcgacgg 484
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 197 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 256 |||||| ||||||| || |||||||||||||||||||||||| ||||| ||||| || Sbjct: 3441988 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 3442047 Query: 257 accgtgccgggcgccggcggcctcggagccgacttctgctacatcgag 304 ||||| || ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 3442048 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 3442095 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 340 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 399 |||||||||||||||||||||| | |||||||||| |||||||| ||| | || | || Sbjct: 3442152 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 3442211 Query: 400 ctcgtggaaagggctggaggtgttcgacgg 429 ||||||| | |||||||||||||||||||| Sbjct: 3442212 ctcgtggcacgggctggaggtgttcgacgg 3442241
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 ttctcgtggaaagggctggagg 419 |||||||||||||||||||||| Sbjct: 150888 ttctcgtggaaagggctggagg 150909
>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence Length = 178775 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 ttctcgtggaaagggctggagg 419 |||||||||||||||||||||| Sbjct: 167897 ttctcgtggaaagggctggagg 167876
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agcgtgtgggagtcggagtgc 361 ||||||||||||||||||||| Sbjct: 20753473 agcgtgtgggagtcggagtgc 20753493 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 tcgccgtccggcaagtacgcggcg 238 ||||||||||||||| |||||||| Sbjct: 19105371 tcgccgtccggcaagaacgcggcg 19105394
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agcgtgtgggagtcggagtgc 361 ||||||||||||||||||||| Sbjct: 28502 agcgtgtgggagtcggagtgc 28522
>ref|XM_526649.1| PREDICTED: Pan troglodytes similar to cytochrome P450, family 2, subfamily U, polypeptide 1; cytochrome P450 P450TEC (LOC471267), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgggcgccggcggcctcgg 282 |||||||||||||||||||| Sbjct: 153 ccgggcgccggcggcctcgg 134
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 tcgccgtccggcaagtacgcggcg 238 ||||||||||||||| |||||||| Sbjct: 150656 tcgccgtccggcaagaacgcggcg 150679
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 tcgccgtccggcaagtacgcggcg 238 ||||||||||||||| |||||||| Sbjct: 35330 tcgccgtccggcaagaacgcggcg 35353
>gb|AY343323.1| Homo sapiens cytochrome P450 mRNA, complete cds Length = 3544 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgggcgccggcggcctcgg 282 |||||||||||||||||||| Sbjct: 36 ccgggcgccggcggcctcgg 17
>ref|NM_183075.2| Homo sapiens cytochrome P450, family 2, subfamily U, polypeptide 1 (CYP2U1), mRNA Length = 4760 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgggcgccggcggcctcgg 282 |||||||||||||||||||| Sbjct: 80 ccgggcgccggcggcctcgg 61
>gb|BC012027.1| Homo sapiens cytochrome P450, family 2, subfamily U, polypeptide 1, mRNA (cDNA clone IMAGE:4706746), complete cds Length = 1576 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgggcgccggcggcctcgg 282 |||||||||||||||||||| Sbjct: 56 ccgggcgccggcggcctcgg 37
>emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chromosome 14, complete sequence Length = 227368 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 aaacccaaaccccagcagccatgg 53 |||||||||||| ||||||||||| Sbjct: 143084 aaacccaaacccaagcagccatgg 143107
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accaagcagcaaatcttggc 168 |||||||||||||||||||| Sbjct: 65919 accaagcagcaaatcttggc 65900
>gb|AC091652.4| Homo sapiens BAC clone RP11-26I6 from 7, complete sequence Length = 44121 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 gtggaaagggctggaggtgt 422 |||||||||||||||||||| Sbjct: 6604 gtggaaagggctggaggtgt 6623
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tgacgtcgccgtccggcaag 229 |||||||||||||||||||| Sbjct: 3588099 tgacgtcgccgtccggcaag 3588118
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tgccgggcgccggcggcctc 280 |||||||||||||||||||| Sbjct: 134081 tgccgggcgccggcggcctc 134062
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccgggcgccggcggcctcg 281 |||||||||||||||||||| Sbjct: 151137 gccgggcgccggcggcctcg 151156
>gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, complete sequence Length = 155405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgtttgtcctcccttcccac 109 |||||||||||||||||||| Sbjct: 139119 tgtttgtcctcccttcccac 139100
>gb|AC103579.10| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Clone RP23-145J23, Complete Sequence, complete sequence Length = 227361 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aaacccaaaccccagcagccatgg 53 |||||||||||| ||||||||||| Sbjct: 104955 aaacccaaacccaagcagccatgg 104932
>gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, complete sequence Length = 163317 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgggcgccggcggcctcgg 282 |||||||||||||||||||| Sbjct: 145085 ccgggcgccggcggcctcgg 145066
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gtcgacaacaacttcctcaa 486 |||||||||||||||||||| Sbjct: 535084 gtcgacaacaacttcctcaa 535103 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gccgggcgcggaggggcgga 341 |||||||||||||||||||| Sbjct: 277635 gccgggcgcggaggggcgga 277654
>gb|AC034114.17| Homo sapiens chromosome 8, clone RP11-775E10, complete sequence Length = 154210 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tgtttgtcctcccttcccac 109 |||||||||||||||||||| Sbjct: 125494 tgtttgtcctcccttcccac 125513
>gb|AC133585.11| Mus musculus chromosome 14, clone RP24-456G16, complete sequence Length = 174807 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tgccatgtgcctcttgctgg 89 |||||||||||||||||||| Sbjct: 82321 tgccatgtgcctcttgctgg 82340 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,174,045 Number of Sequences: 3902068 Number of extensions: 3174045 Number of successful extensions: 62167 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61845 Number of HSP's gapped (non-prelim): 322 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)