>ref|XM_480323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1410

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 524 gtggcggtcggcgtggcgatgcaccacgcagtggtcgacggccggtcggtatggaggttc 583
           |||||||||||||||||| |||||||||| ||||  |||||||| ||||| |||||||||
Sbjct: 520 gtggcggtcggcgtggcgctgcaccacgccgtggcggacggccgctcggtctggaggttc 579



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 tcgtcggctccctccgcgcgtcactggcggccacgctcgcgcggcttcccccgctcgccg 293
           |||||| | ||||||||||||| |||||||  ||| | |||||||| |  || |||||||
Sbjct: 212 tcgtcgccgccctccgcgcgtccctggcggagacggtggcgcggctactgcccctcgccg 271

                               
Query: 294 gaaggatcgtcttcctgccg 313
           | |||||||||  |||||||
Sbjct: 272 gtaggatcgtccacctgccg 291

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                           
Query: 524     gtggcggtcggcgtggcgatgcaccacgcagtggtcgacggccggtcggtatggaggttc 583
               |||||||||||||||||| |||||||||| ||||  |||||||| ||||| |||||||||
Sbjct: 4320165 gtggcggtcggcgtggcgctgcaccacgccgtggcggacggccgctcggtctggaggttc 4320224



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                           
Query: 234     tcgtcggctccctccgcgcgtcactggcggccacgctcgcgcggcttcccccgctcgccg 293
               |||||| | ||||||||||||| |||||||  ||| | |||||||| |  || |||||||
Sbjct: 4319857 tcgtcgccgccctccgcgcgtccctggcggagacggtggcgcggctactgcccctcgccg 4319916

                                   
Query: 294     gaaggatcgtcttcctgccg 313
               | |||||||||  |||||||
Sbjct: 4319917 gtaggatcgtccacctgccg 4319936



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 155     ccgtgggtcgtactcccggtcatccagcgcgtgttcct 192
               ||||||||||| ||||||   |||||||||||||||||
Sbjct: 4312069 ccgtgggtcgtgctcccgccgatccagcgcgtgttcct 4312032

>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0054L03
          Length = 183623

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 524   gtggcggtcggcgtggcgatgcaccacgcagtggtcgacggccggtcggtatggaggttc 583
             |||||||||||||||||| |||||||||| ||||  |||||||| ||||| |||||||||
Sbjct: 82959 gtggcggtcggcgtggcgctgcaccacgccgtggcggacggccgctcggtctggaggttc 83018



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 234   tcgtcggctccctccgcgcgtcactggcggccacgctcgcgcggcttcccccgctcgccg 293
             |||||| | ||||||||||||| |||||||  ||| | |||||||| |  || |||||||
Sbjct: 82651 tcgtcgccgccctccgcgcgtccctggcggagacggtggcgcggctactgcccctcgccg 82710

                                 
Query: 294   gaaggatcgtcttcctgccg 313
             | |||||||||  |||||||
Sbjct: 82711 gtaggatcgtccacctgccg 82730



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 155   ccgtgggtcgtactcccggtcatccagcgcgtgttcct 192
             ||||||||||| ||||||   |||||||||||||||||
Sbjct: 74863 ccgtgggtcgtgctcccgccgatccagcgcgtgttcct 74826

>ref|XM_474053.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 531

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 521 ggggtggcggtcggcgtggcgatgcaccacg 551
           |||||||||||||||||| || |||||||||
Sbjct: 475 ggggtggcggtcggcgtgacggtgcaccacg 505

>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
             complete sequence
          Length = 123480

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 521   ggggtggcggtcggcgtggcgatgcaccacg 551
             |||||||||||||||||| || |||||||||
Sbjct: 96164 ggggtggcggtcggcgtgacggtgcaccacg 96134

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 521      ggggtggcggtcggcgtggcgatgcaccacg 551
                |||||||||||||||||| || |||||||||
Sbjct: 32479363 ggggtggcggtcggcgtgacggtgcaccacg 32479333

>ref|XM_480321.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 155 ccgtgggtcgtactcccggtcatccagcgcgtgttcct 192
           ||||||||||| ||||||   |||||||||||||||||
Sbjct: 133 ccgtgggtcgtgctcccgccgatccagcgcgtgttcct 170

>gb|AC114820.4| Mus musculus BAC clone RP23-70M6 from 18, complete sequence
          Length = 174470

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 511   gttgaagggtggggtggcggtc 532
             ||||||||||||||||||||||
Sbjct: 25579 gttgaagggtggggtggcggtc 25600

>ref|NM_196396.1| Oryza sativa (japonica cultivar-group) putative anthocyanin
           5-aromatic acyltransferase (OSJNBa0044A10.13), mRNA
          Length = 1371

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 524 gtggcggtcggcgtggcgatgcaccacgc 552
           ||||||||||| ||||| |||||||||||
Sbjct: 475 gtggcggtcggggtggccatgcaccacgc 503

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 95      ttcgacagcgtcgccccgccg 115
               |||||||||||||||||||||
Sbjct: 6024731 ttcgacagcgtcgccccgccg 6024751

>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0044A10, from chromosome 10, complete sequence
          Length = 169270

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 524   gtggcggtcggcgtggcgatgcaccacgc 552
             ||||||||||| ||||| |||||||||||
Sbjct: 53943 gtggcggtcggggtggccatgcaccacgc 53915

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 524      gtggcggtcggcgtggcgatgcaccacgc 552
                ||||||||||| ||||| |||||||||||
Sbjct: 13098424 gtggcggtcggggtggccatgcaccacgc 13098396



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 388      cgaggcggacgctgggcggctcggcggggacg 419
                |||| ||||||| ||||| |||||||||||||
Sbjct: 20517739 cgagacggacgccgggcgcctcggcggggacg 20517708

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 524      gtggcggtcggcgtggcgatgcaccacgc 552
                ||||||||||| ||||| |||||||||||
Sbjct: 13105764 gtggcggtcggggtggccatgcaccacgc 13105736



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 388      cgaggcggacgctgggcggctcggcggggacg 419
                |||| ||||||| ||||| |||||||||||||
Sbjct: 20529011 cgagacggacgccgggcgcctcggcggggacg 20528980

>gb|AY013257.1| Chlamydomonas reinhardtii Rh protein mRNA, complete cds
          Length = 3183

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  tgttactcaggctgtccgcg 145
            ||||||||||||||||||||
Sbjct: 2793 tgttactcaggctgtccgcg 2812

>ref|NM_197572.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0064P21.6), mRNA
          Length = 2499

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 388 cgaggcggacgctgggcggctcggcggggacg 419
           |||| ||||||| ||||| |||||||||||||
Sbjct: 637 cgagacggacgccgggcgcctcggcggggacg 606

>gb|AY538710.1| Schlegelella sp. KB1a PHB depolymerase (phaZ) gene, complete cds
          Length = 1658

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ccagcgcgtgttcctcttcg 197
           ||||||||||||||||||||
Sbjct: 530 ccagcgcgtgttcctcttcg 549

>gb|AC150569.2| Bos taurus  BAC CH240-223K16 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186055

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    cggtcatccagcgcgtgttc 190
              ||||||||||||||||||||
Sbjct: 108225 cggtcatccagcgcgtgttc 108206

>ref|XM_581793.2| PREDICTED: Bos taurus similar to forkhead box P2 (LOC505502), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  cggtcatccagcgcgtgttc 190
            ||||||||||||||||||||
Sbjct: 1028 cggtcatccagcgcgtgttc 1009

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ggcgtgcggttcatcgtcgc 378
              ||||||||||||||||||||
Sbjct: 181654 ggcgtgcggttcatcgtcgc 181673

>ref|NM_012420.1| Homo sapiens interferon-induced protein with tetratricopeptide
           repeats 5 (IFIT5), mRNA
          Length = 3906

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 271 cgcgcggcttcccccgctcgccgg 294
           ||||||||||||||||||| ||||
Sbjct: 32  cgcgcggcttcccccgctccccgg 55

>ref|XM_535981.2| PREDICTED: Canis familiaris similar to titin (LOC478819), mRNA
          Length = 45229

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cggctcggcggggacgcgga 423
             ||||||||||||||||||||
Sbjct: 40280 cggctcggcggggacgcgga 40261

>gb|AF547430.1| Mycobacteriophage PG1, complete genome
          Length = 68999

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ggacgcgttcaaggcgttcg 452
             ||||||||||||||||||||
Sbjct: 25445 ggacgcgttcaaggcgttcg 25464

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     ggcgtgcggttcatcgtcgc 378
               ||||||||||||||||||||
Sbjct: 1577150 ggcgtgcggttcatcgtcgc 1577169

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 525     tggcggtcggcgtggcgatg 544
               ||||||||||||||||||||
Sbjct: 4420175 tggcggtcggcgtggcgatg 4420156

>gb|AY013258.1| Chlamydomonas reinhardtii Rh protein gene, complete cds
          Length = 4931

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  tgttactcaggctgtccgcg 145
            ||||||||||||||||||||
Sbjct: 4595 tgttactcaggctgtccgcg 4614

>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 388   cgaggcggacgctgggcggctcggcggggacg 419
             |||| ||||||| ||||| |||||||||||||
Sbjct: 23029 cgagacggacgccgggcgcctcggcggggacg 22998

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 80      gtcaagatcgtcgaattcgacagc 103
               ||||||||||||||||||| ||||
Sbjct: 2401279 gtcaagatcgtcgaattcgccagc 2401256

>gb|AC074109.3|AC074109 Arabidopsis thaliana chromosome 1 BAC F2C1 genomic sequence, complete
             sequence
          Length = 123547

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   cgccgcaatcgaatgctccgcctc 348
             |||||||||||||| |||||||||
Sbjct: 13804 cgccgcaatcgaatactccgcctc 13781

>gb|U34605.1|HSU34605 Human retinoic acid- and interferon-inducible 58K protein RI58
           mRNA, complete cds
          Length = 3906

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 271 cgcgcggcttcccccgctcgccgg 294
           ||||||||||||||||||| ||||
Sbjct: 32  cgcgcggcttcccccgctccccgg 55

>dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C17, full
           insert sequence
          Length = 2784

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 388 cgaggcggacgctgggcggctcggcggggacg 419
           |||| ||||||| ||||| |||||||||||||
Sbjct: 674 cgagacggacgccgggcgcctcggcggggacg 643

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 465    aggtcgacgtgctccctgccgagg 488
              ||||||||||||| ||||||||||
Sbjct: 449409 aggtcgacgtgctgcctgccgagg 449386

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 359     ggcgtgcggttcatcgtcgc 378
               ||||||||||||||||||||
Sbjct: 1461685 ggcgtgcggttcatcgtcgc 1461666



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     gcggccacgctcgcgcggct 279
               ||||||||||||||||||||
Sbjct: 1086366 gcggccacgctcgcgcggct 1086385

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 522     gggtggcggtcggcgtggcgatgc 545
               |||||||||||||||||| |||||
Sbjct: 1454870 gggtggcggtcggcgtggggatgc 1454893


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,860,166
Number of Sequences: 3902068
Number of extensions: 2860166
Number of successful extensions: 71077
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70046
Number of HSP's gapped (non-prelim): 1028
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)