Clone Name | bart39a06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK103912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C07, full insert sequence Length = 1390 Score = 430 bits (217), Expect = e-117 Identities = 397/457 (86%) Strand = Plus / Plus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 99 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 158 Query: 205 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 264 |||| ||||||||||| || ||| || |||| | || |||||| |||||||||||||| Sbjct: 159 gccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcct 218 Query: 265 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 324 || |||||||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| Sbjct: 219 gggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagc 278 Query: 325 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 384 ||||| | || | |||||||||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 279 gatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataac 338 Query: 385 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 444 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 339 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattat 398 Query: 445 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 504 ||||| |||||||| |||||||||||||| |||||||| || || ||| |||| |||| Sbjct: 399 gttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagt 458 Query: 505 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 564 ||||| || |||| ||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 459 caagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacag 518 Query: 565 aagcttactcagagcctaaaggatcgacttcagccat 601 ||||||| |||||||||||| ||||||||||| |||| Sbjct: 519 aagcttattcagagcctaaaagatcgacttcaaccat 555
>dbj|AK071113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077E11, full insert sequence Length = 1434 Score = 430 bits (217), Expect = e-117 Identities = 397/457 (86%) Strand = Plus / Plus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 143 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 202 Query: 205 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 264 |||| ||||||||||| || ||| || |||| | || |||||| |||||||||||||| Sbjct: 203 gccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcct 262 Query: 265 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 324 || |||||||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| Sbjct: 263 gggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagc 322 Query: 325 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 384 ||||| | || | |||||||||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 323 gatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataac 382 Query: 385 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 444 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 383 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattat 442 Query: 445 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 504 ||||| |||||||| |||||||||||||| |||||||| || || ||| |||| |||| Sbjct: 443 gttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagt 502 Query: 505 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 564 ||||| || |||| ||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 503 caagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacag 562 Query: 565 aagcttactcagagcctaaaggatcgacttcagccat 601 ||||||| |||||||||||| ||||||||||| |||| Sbjct: 563 aagcttattcagagcctaaaagatcgacttcaaccat 599
>gb|AY105051.1| Zea mays PCO110431 mRNA sequence Length = 1309 Score = 373 bits (188), Expect = e-100 Identities = 386/452 (85%) Strand = Plus / Plus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| | |||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 221 gccatggtgaaggacagcgcctactacgatgtcctggggctcagcgtcgacgcgtccccc 280 Query: 205 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 264 |||| ||||||||||| || ||| | |||| | ||||||||| ||||||||||||||| Sbjct: 281 gccgagatcaagaaggcgtattacattaaggcgaagctggtgcatccggacaagaatccc 340 Query: 265 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 324 || ||||| |||||||| | || |||||||| ||||||||||| || ||||||||||| Sbjct: 341 gggaaccctgacgcggcactcaagttccaggaacttggagaggcttatcaagtcctaagt 400 Query: 325 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 384 ||||| | || |||||||| |||||||| ||||||||||||| || ||||||| ||| Sbjct: 401 gatcctgggaaaaaggaggcgtatgataattatggaaaggagggtattccccaggataac 460 Query: 385 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 444 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 461 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattac 520 Query: 445 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 504 ||||| ||||||||||| ||||| |||||||||||||||||||| ||| | || ||| Sbjct: 521 gttggccagcttgctctagcatctatagcttcagtggaggttgaggaaaactcaaatagt 580 Query: 505 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 564 ||||| || |||||||| |||||||| || ||||||| ||| |||| |||||||| ||| Sbjct: 581 caagaggcaagagcaaaagttcaagaaaagataaaagagttacaaagggaaagagaacaa 640 Query: 565 aagcttactcagagcctaaaggatcgacttca 596 |||||||||||||| || ||||| |||||||| Sbjct: 641 aagcttactcagagtctgaaggaccgacttca 672
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 167 bits (84), Expect = 5e-38 Identities = 141/160 (88%) Strand = Plus / Minus Query: 382 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 441 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 68544 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 68485 Query: 442 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 501 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 68484 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 68425 Query: 502 agtcaagacgccagagcaaaggttcaagagaaaataaaag 541 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 68424 agtcaagaagcaagagggaaggttcaagagaaaattaaag 68385 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 69847 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 69788 Query: 205 tccgacatcaagaaggc 221 |||| ||||||||||| Sbjct: 69787 gccgagatcaagaaggc 69771 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 292 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 351 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 69051 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 68992 Query: 352 aagcatggaaaggaggg 368 ||||||||||||||||| Sbjct: 68991 aagcatggaaaggaggg 68975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 547 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccat 601 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| Sbjct: 68261 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccat 68207 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 230 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 289 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 69608 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 69549 Query: 290 tccagg 295 | |||| Sbjct: 69548 ttcagg 69543
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 167 bits (84), Expect = 5e-38 Identities = 141/160 (88%) Strand = Plus / Minus Query: 382 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 441 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 24845 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 24786 Query: 442 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 501 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 24785 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 24726 Query: 502 agtcaagacgccagagcaaaggttcaagagaaaataaaag 541 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 24725 agtcaagaagcaagagggaaggttcaagagaaaattaaag 24686 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 26148 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 26089 Query: 205 tccgacatcaagaaggc 221 |||| ||||||||||| Sbjct: 26088 gccgagatcaagaaggc 26072 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 292 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 351 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 25352 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 25293 Query: 352 aagcatggaaaggaggg 368 ||||||||||||||||| Sbjct: 25292 aagcatggaaaggaggg 25276 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 547 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccat 601 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| Sbjct: 24562 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccat 24508 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 230 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 289 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 25909 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 25850 Query: 290 tccagg 295 | |||| Sbjct: 25849 ttcagg 25844
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 167 bits (84), Expect = 5e-38 Identities = 141/160 (88%) Strand = Plus / Minus Query: 382 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 441 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 26786605 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 26786546 Query: 442 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 501 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 26786545 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 26786486 Query: 502 agtcaagacgccagagcaaaggttcaagagaaaataaaag 541 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 26786485 agtcaagaagcaagagggaaggttcaagagaaaattaaag 26786446 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 26787908 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 26787849 Query: 205 tccgacatcaagaaggc 221 |||| ||||||||||| Sbjct: 26787848 gccgagatcaagaaggc 26787832 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 292 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 351 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 26787112 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 26787053 Query: 352 aagcatggaaaggaggg 368 ||||||||||||||||| Sbjct: 26787052 aagcatggaaaggaggg 26787036 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 547 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccat 601 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| Sbjct: 26786322 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccat 26786268 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 230 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 289 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 26787669 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 26787610 Query: 290 tccagg 295 | |||| Sbjct: 26787609 ttcagg 26787604 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 3737904 ctcttcttcctcctcttcttcttc 3737927
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 382 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 441 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7471 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 7530 Query: 442 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 501 |||||||| || ||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 7531 tatgttggacaacttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 7590 Query: 502 agtcaagacgccagagcaaaggttcaagagaaaataaaag 541 ||||||| || |||| ||||||||||||||||| |||| Sbjct: 7591 ggtcaagaagcaagagggaaggttcaagagaaaattaaag 7630 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 145 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 204 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 6167 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 6226 Query: 205 tccgacatcaagaaggc 221 |||| ||||||||||| Sbjct: 6227 gccgagatcaagaaggc 6243 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 292 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 351 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 6964 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 7023 Query: 352 aagcatggaaaggaggg 368 ||||||||||||||||| Sbjct: 7024 aagcatggaaaggaggg 7040 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 547 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccat 601 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| Sbjct: 7754 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccat 7808 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 230 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 289 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 6407 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 6466 Query: 290 tccagg 295 | |||| Sbjct: 6467 ttcagg 6472
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 398 ctgctgtctttgggatgctttttggaagcgactattttgaagactatgttggtcagcttg 457 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 29114414 ctgctgtctttggaatgctttttgggagcgactattttgaagattatgttggtcagtttg 29114473 Query: 458 ctctggcatccatagcttcagtggaggttgatgaag 493 | |||||||| |||||||||| ||| |||| |||| Sbjct: 29114474 cactggcatctgtagcttcagtagagattgaggaag 29114509 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 543 gttgcaaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccata 602 ||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 29114697 gttgcaaaccgaaagagagcaaaagcttgttcaaagccttaaggatcgacttcaaccata 29114756 Query: 603 tg 604 || Sbjct: 29114757 tg 29114758 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 233 aggccaggctggtgcacccggacaagaatccc 264 |||||| | |||||||||| |||||||||||| Sbjct: 29113248 aggccaagttggtgcaccctgacaagaatccc 29113279 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttccccgg 50 ||||||||||| ||| |||||||||||| Sbjct: 12492524 tcttcttcctcgtcgccttcttccccgg 12492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gaaccttcgagaagcttctagaac 74 |||||||| ||||||||||||||| Sbjct: 1229449 gaaccttccagaagcttctagaac 1229426
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 398 ctgctgtctttgggatgctttttggaagcgactattttgaagactatgttggtcagcttg 457 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 74780 ctgctgtctttggaatgctttttgggagcgactattttgaagattatgttggtcagtttg 74839 Query: 458 ctctggcatccatagcttcagtggaggttgatgaag 493 | |||||||| |||||||||| ||| |||| |||| Sbjct: 74840 cactggcatctgtagcttcagtagagattgaggaag 74875 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 543 gttgcaaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccata 602 ||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 75063 gttgcaaaccgaaagagagcaaaagcttgttcaaagccttaaggatcgacttcaaccata 75122 Query: 603 tg 604 || Sbjct: 75123 tg 75124 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 233 aggccaggctggtgcacccggacaagaatccc 264 |||||| | |||||||||| |||||||||||| Sbjct: 73614 aggccaagttggtgcaccctgacaagaatccc 73645
>gb|AY107498.1| Zea mays PCO134240 mRNA sequence Length = 692 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 206 ccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaa 260 |||| ||||||||||||||||||||| |||| |||| ||| || ||||||||||| Sbjct: 299 ccgagatcaagaaggcatactacgtcaaggcgaggcaggtccatccggacaagaa 353
>gb|AY108538.1| Zea mays PCO063014 mRNA sequence Length = 842 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 205 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaa 260 ||||| ||||||||||| ||||||||| |||| |||||||| ||||| || ||||| Sbjct: 282 tccgagatcaagaaggcgtactacgtcaaggcgaggctggtccaccccgataagaa 337
>emb|AL161792.29| Human DNA sequence from clone RP11-84P7 on chromosome 9 Contains a high-mobility group box pseudogene, two novel gene and the 3' end of the RNF38 gene for ring finger protein 38, complete sequence Length = 77027 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||||| Sbjct: 13717 tctcttcttcctcctcgtcttcttc 13741
>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3 Contains a high mobility group (nonhistone chromosomal) protein 4 (HMG4) pseudogene, complete sequence Length = 156667 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||||| Sbjct: 34868 tctcttcttcctcctcgtcttcttc 34844
>ref|XM_939877.1| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC650792), mRNA Length = 1133 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||||| Sbjct: 622 tctcttcttcctcctcgtcttcttc 598
>ref|XM_929965.1| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA Length = 1133 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||||| Sbjct: 622 tctcttcttcctcctcgtcttcttc 598
>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence Length = 198579 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||||||||||||| Sbjct: 100990 ctcttcttcctcctcgtcttcttcc 100966
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||||||||||||| Sbjct: 66250 ctcttcttcctcctcgtcttcttcc 66274
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 aatctcttcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| |||||| Sbjct: 1020101 aatctcttcttcctcctcgtcctcttcc 1020074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcttcctcctcgtcttcttc 45 |||||||||||||||||||| Sbjct: 797992 tcttcctcctcgtcttcttc 797973
>ref|XM_572547.1| Cryptococcus neoformans var. neoformans JEC21 centromeric DNA binding protein (CNH00580) partial mRNA Length = 2305 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 aatctcttcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| |||||| Sbjct: 2118 aatctcttcttcctcctcgtcctcttcc 2091
>ref|XM_572548.1| Cryptococcus neoformans var. neoformans JEC21 centromeric DNA binding protein (CNH00580) partial mRNA Length = 2384 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 aatctcttcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| |||||| Sbjct: 2118 aatctcttcttcctcctcgtcctcttcc 2091
>ref|XM_501147.1| Yarrowia lipolytica CLIB122, YALI0B20680g predicted mRNA Length = 2352 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||||||| Sbjct: 2210 tcttcttcctcctcgtcttcttcc 2187 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 ||||||||| |||||||||||||| Sbjct: 2225 tcttcttccccctcgtcttcttcc 2202
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcccc 48 |||||||||||||||| ||||||||||| Sbjct: 5581 tctcttcttcctcctcttcttcttcccc 5608
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||||||| Sbjct: 2725191 tcttcttcctcctcgtcttcttcc 2725168 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 ||||||||| |||||||||||||| Sbjct: 2725206 tcttcttccccctcgtcttcttcc 2725183
>ref|NM_101962.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT1G21080 mRNA, complete cds Length = 1593 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 ggagaggcctaccaagtcctaagcgatccag 331 ||||||||||||||||| ||||| ||||||| Sbjct: 341 ggagaggcctaccaagtgctaagtgatccag 371
>ref|XM_483390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1782 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 gcggcggccatggtgaaggagac 161 ||||||||||||||||||||||| Sbjct: 259 gcggcggccatggtgaaggagac 281
>ref|XM_956693.1| Neurospora crassa OR74A hypothetical protein (NCU07897.1) partial mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttctt 44 ||||||||||||||||||||||| Sbjct: 150 ctcttcttcctcctcgtcttctt 128
>ref|XM_328602.1| Neurospora crassa OR74A hypothetical protein (NCU07897.1) partial mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttctt 44 ||||||||||||||||||||||| Sbjct: 150 ctcttcttcctcctcgtcttctt 128
>ref|XM_811341.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507049.179) partial mRNA Length = 3402 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||| Sbjct: 1892 tcttcttcctcctcgtcttcttc 1870
>gb|AY046050.1| Arabidopsis thaliana unknown protein (At1g21080) mRNA, complete cds Length = 1609 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 ggagaggcctaccaagtcctaagcgatccag 331 ||||||||||||||||| ||||| ||||||| Sbjct: 342 ggagaggcctaccaagtgctaagtgatccag 372
>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete sequence Length = 211513 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcccc 48 ||||||||||||||| ||||||||||| Sbjct: 138517 ctcttcttcctcctcctcttcttcccc 138543
>ref|XM_690273.1| PREDICTED: Danio rerio similar to somatostatin receptor type 3 (LOC566989), mRNA Length = 1893 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||| Sbjct: 1151 tcttcttcctcctcgtcttcttc 1129
>gb|AY057531.1| Arabidopsis thaliana At1g21080/T22I11_9 mRNA, complete cds Length = 1463 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 ggagaggcctaccaagtcctaagcgatccag 331 ||||||||||||||||| ||||| ||||||| Sbjct: 211 ggagaggcctaccaagtgctaagtgatccag 241
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 gcggcggccatggtgaaggagac 161 ||||||||||||||||||||||| Sbjct: 25972487 gcggcggccatggtgaaggagac 25972509
>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3, complete sequence Length = 192501 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||| Sbjct: 58055 tcttcttcctcctcgtcttcttc 58077
>gb|AC012190.3|T22I11 Arabidopsis thaliana chromosome 1 BAC T22I11 sequence, complete sequence Length = 68986 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 ggagaggcctaccaagtcctaagcgatccag 331 ||||||||||||||||| ||||| ||||||| Sbjct: 35483 ggagaggcctaccaagtgctaagtgatccag 35513
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 gcggcggccatggtgaaggagac 161 ||||||||||||||||||||||| Sbjct: 8048 gcggcggccatggtgaaggagac 8070
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 gcggcggccatggtgaaggagac 161 ||||||||||||||||||||||| Sbjct: 57364 gcggcggccatggtgaaggagac 57386
>dbj|AK105364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E12, full insert sequence Length = 1782 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 gcggcggccatggtgaaggagac 161 ||||||||||||||||||||||| Sbjct: 259 gcggcggccatggtgaaggagac 281
>gb|AY725776.1| Brassica juncea DnaJ-like protein (DnaJ1) mRNA, complete cds Length = 1538 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 ggagaggcctaccaagtcctaagcgatccag 331 ||||||||||||||||| || |||||||||| Sbjct: 272 ggagaggcctaccaagtgctgagcgatccag 302
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||| Sbjct: 188641 tcttcttcctcctcgtcttcttc 188663
>gb|DQ249362.1| Daphnia pulex microsatellite Dp887 sequence Length = 207 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttc 45 ||||||||||||||||||||||| Sbjct: 153 tcttcttcctcctcgtcttcttc 131
>ref|NM_121263.2| Arabidopsis thaliana TUB6 (BETA-6 TUBULIN) AT5G12250 (TUB6) mRNA, complete cds Length = 1641 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 1414 atctcttcttcatcctcgtcttcttc 1389
>ref|XM_466202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1722 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 285 gaaattccaggatcttggagaggcctacca 314 ||||||||||| ||| |||||||||||||| Sbjct: 432 gaaattccaggctctcggagaggcctacca 461
>ref|XM_515500.1| PREDICTED: Pan troglodytes LOC459263 (LOC459263), mRNA Length = 10128 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 7478 tcttcttcctcctcttcttcttcccc 7453
>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence Length = 154199 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 76877 tctcttcttcctcctcttcttcttcc 76902
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 81853 tctcttcttcctcctcttcttcttcc 81828
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||||||||| |||||||| Sbjct: 56159 atctcttcttcctcctcttcttcttc 56184
>gb|AC147155.2| Mus musculus BAC clone RP24-341L19 from chromosome Y, complete sequence Length = 156459 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 cttcttcctcctcgtcttcttc 45 |||||||||||||||||||||| Sbjct: 129277 cttcttcctcctcgtcttcttc 129256
>ref|NM_014709.2| Homo sapiens ubiquitin specific peptidase 34 (USP34), mRNA Length = 10188 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 7046 tcttcttcctcctcttcttcttcccc 7021
>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence Length = 185838 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 69709 tctcttcttcctcctcctcttcttcc 69684 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 69666 ctcttcttcctcctcctcttcttcc 69642 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 69567 ctcttcttcctcctcctcttcttcc 69543 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 69651 ctcttcttcctcctcctcttcttc 69628
>gb|AC125467.4| Mus musculus BAC clone RP24-91P24 from chromosome 8, complete sequence Length = 200304 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 172997 tctcttcttcctcctcctcttcttcc 172972
>gb|AC122930.4| Mus musculus BAC clone RP23-13L19 from chromosome 9, complete sequence Length = 224108 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 222849 tctcttcttcctcctcatcttcttcc 222824
>ref|XM_850041.1| PREDICTED: Canis familiaris similar to ubiquitin specific protease 34 (LOC474608), mRNA Length = 11266 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 7487 tcttcttcctcctcctcttcttcccc 7462
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 68126 tctcttcttcctcctcctcttcttcc 68101
>gb|AC098717.3| Mus musculus BAC clone RP23-2G2 from 12, complete sequence Length = 211702 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 197276 tctcttcttcctcctcctcttcttcc 197251
>ref|XM_722670.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06994) partial mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 443 tcttcttcctcctcatcttcttcccc 418
>gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete sequence Length = 89880 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttctt 44 |||||||||||||||||||||| Sbjct: 9670 tcttcttcctcctcgtcttctt 9649
>gb|AC153015.4| Mus musculus BAC clone RP23-200I3 from chromosome 8, complete sequence Length = 232038 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 130120 tctcttcttcctcctcctcttcttcc 130145
>emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3 gene for PTMA (prothymosin, alpha) pseudogene 3, the 3' end of the ZNF339 gene for zinc finger protein 339 and two CpG islands, complete sequence Length = 139953 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||||||||| ||||| Sbjct: 118784 tcttcttcctcctcgtcttcctcccc 118759
>ref|XM_964274.1| PREDICTED: Tribolium castaneum similar to Glutamate [NMDA] receptor subunit 3A precursor (N-methyl-D-aspartate receptor subtype NR3A) (NMDAR-L) (LOC657839), mRNA Length = 4392 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttcc 46 |||||||||||||||||||||| Sbjct: 1797 ttcttcctcctcgtcttcttcc 1776
>gb|AY040074.1| Arabidopsis thaliana putative tubulin beta-6 chain (At5g12250) mRNA, complete cds Length = 1350 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 1334 atctcttcttcatcctcgtcttcttc 1309
>gb|AF360260.1| Arabidopsis thaliana putative tubulin beta-6 chain (At5g12250) mRNA, complete cds Length = 1661 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 1406 atctcttcttcatcctcgtcttcttc 1381
>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence Length = 174676 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 97025 tctcttcttcctcctcctcttcttcc 97000
>gb|AC162938.5| Mus musculus BAC clone RP23-104D6 from chromosome 9, complete sequence Length = 204657 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 86888 tcttcttcctcctcctcttcttcccc 86863
>emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome 5, BAC clone T2L20 (ESSA project) Length = 98506 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 3414 atctcttcttcatcctcgtcttcttc 3439
>dbj|AK125898.1| Homo sapiens cDNA FLJ43910 fis, clone TESTI4010851, weakly similar to Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) Length = 4555 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 2040 tcttcttcctcctcttcttcttcccc 2015
>dbj|AK023845.1| Homo sapiens cDNA FLJ13783 fis, clone PLACE4000558, weakly similar to PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAF (EC 3.1.2.15) Length = 6304 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 1561 tcttcttcctcctcttcttcttcccc 1536
>dbj|AK001193.1| Homo sapiens cDNA FLJ10331 fis, clone NT2RM2000635, highly similar to Homo sapiens mRNA for KIAA0729 protein Length = 3891 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 112 tcttcttcctcctcttcttcttcccc 87
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 153393 tctcttcttcctcctcatcttcttcc 153418
>gb|AY187547.1| Strongylocentrotus purpuratus heat shock protein gp96 mRNA, complete cds Length = 2497 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttcc 46 |||||||||||||||||||||| Sbjct: 2380 ttcttcctcctcgtcttcttcc 2359
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||||||||| |||||||| Sbjct: 19573084 atctcttcttcctcctcttcttcttc 19573109 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 13582594 tcttcttcctcctcttcttcttcc 13582571
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 93769 tctcttcttcctcctcctcttcttcc 93794 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 93785 ctcttcttcctcctcctcttcttcc 93809
>gb|AC018889.7| Homo sapiens BAC clone RP11-479F13 from 2, complete sequence Length = 94084 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 21219 tcttcttcctcctcttcttcttcccc 21244
>ref|NM_214643.1| Strongylocentrotus purpuratus heat shock protein gp96 (Gp96), mRNA Length = 2497 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttcc 46 |||||||||||||||||||||| Sbjct: 2380 ttcttcctcctcgtcttcttcc 2359
>emb|AJ586138.1| Homo sapiens mRNA for ubiquitin-specific proteinase 34 (USP34 gene) Length = 10188 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 7046 tcttcttcctcctcttcttcttcccc 7021
>emb|AL671907.6| Mouse DNA sequence from clone RP23-245F8 on chromosome X, complete sequence Length = 144116 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 8906 tctcttcttcctcctcttcttcttcc 8881
>dbj|AB007727.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC9 Length = 79590 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 69837 atctcttcttcatcctcgtcttcttc 69862
>dbj|AK117925.1| Arabidopsis thaliana At5g12250 mRNA for putative tubulin beta-6 chain, complete cds, clone: RAFL19-11-D12 Length = 1649 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 1449 atctcttcttcatcctcgtcttcttc 1424
>dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A01, full insert sequence Length = 1722 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 285 gaaattccaggatcttggagaggcctacca 314 ||||||||||| ||| |||||||||||||| Sbjct: 432 gaaattccaggctctcggagaggcctacca 461
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 271698 tctcttcttcctcctcctcttcttcc 271723 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 271714 ctcttcttcctcctcctcttcttcc 271738
>emb|CT010460.16| Mouse DNA sequence from clone RP23-311G21 on chromosome 12, complete sequence Length = 243288 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 79996 tctcttcttcctcctcctcttcttcc 80021
>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence Length = 216860 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 51452 tctcttcttcctcctcttcttcttcc 51427
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete sequence Length = 169465 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 cttcttcctcctcgtcttcttc 45 |||||||||||||||||||||| Sbjct: 81226 cttcttcctcctcgtcttcttc 81205
>gb|AC127585.3| Mus musculus BAC clone RP24-141G21 from 15, complete sequence Length = 145858 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 39687 tctcttcttcctcctcttcttcttcc 39712
>gb|AC135083.4| Mus musculus BAC clone RP24-238A21 from 14, complete sequence Length = 179469 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 126201 tctcttcttcctcctcctcttcttcc 126176
>gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, complete sequence Length = 221015 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 96442 tctcttcttcctcctcctcttcttcc 96417
>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence Length = 220046 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 150431 tctcttcttcctcctcctcttcttcc 150406
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| ||||||||| Sbjct: 154508 tctcttcttcctcctcctcttcttcc 154533
>emb|AL807763.7| Mouse DNA sequence from clone RP23-28B24 on chromosome 4, complete sequence Length = 219463 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttc 42 |||||||||||||||||||||| Sbjct: 140890 tctcttcttcctcctcgtcttc 140869
>emb|AL831918.1|HSM803251 Homo sapiens mRNA; cDNA DKFZp761F2418 (from clone DKFZp761F2418) Length = 2731 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 2333 tcttcttcctcctcttcttcttcccc 2308
>gb|M84703.1|ATHTUB6B Arabidopsis thaliana beta-6 tubulin (TUB6) gene, complete cds Length = 2061 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atctcttcttcctcctcgtcttcttc 45 ||||||||||| |||||||||||||| Sbjct: 1856 atctcttcttcatcctcgtcttcttc 1831
>dbj|AB018272.1| Homo sapiens mRNA for KIAA0729 protein, partial cds Length = 4143 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 450 tcttcttcctcctcttcttcttcccc 425
>dbj|AB011142.2| Homo sapiens mRNA for KIAA0570 protein, partial cds Length = 11269 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcccc 48 |||||||||||||| ||||||||||| Sbjct: 7576 tcttcttcctcctcttcttcttcccc 7551
>gb|AC115877.13| Mus musculus chromosome 15, clone RP24-358H21, complete sequence Length = 169136 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 76012 ctcttcttcctcctcctcttcttcc 75988
>ref|NM_103876.2| Arabidopsis thaliana unknown protein AT1G49890 mRNA, complete cds Length = 2547 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 396 ctcttcttcctcctcttcttcttcc 420
>gb|BC105968.1| Homo sapiens KIAA1285 protein, mRNA (cDNA clone IMAGE:4446489), partial cds Length = 1737 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||| |||| Sbjct: 883 ctcttcttcctcctcgtcttgttcc 859
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 170422 tctcttcttcctcctcttcttcttc 170446
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 81372 ctcttcttcctcctcctcttcttcc 81396
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence Length = 132061 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 128621 ctcttcttcctcctcctcttcttcc 128645
>gb|AC120180.19| Mus musculus chromosome 1, clone RP24-499I2, complete sequence Length = 183516 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 66756 ctcttcttcctcctcctcttcttcc 66732
>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence Length = 185857 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 170757 ctcttcttcctcctcctcttcttcc 170781
>ref|XM_629259.1| Dictyostelium discoideum hypothetical protein (DDB0220643), partial mRNA Length = 9216 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 687 ctcttcttcctcctcctcttcttcc 663 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 672 ctcttcttcctcctcctcttcttc 649
>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (LOC468024), mRNA Length = 13500 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 972 ctcttcttcctcctcctcttcttcc 948
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 58462 ctcttcttcctcctcctcttcttcc 58486
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 55784 ctcttcttcctcctcctcttcttcc 55760
>gb|AC134474.4| Mus musculus BAC clone RP23-234N16 from chromosome 6, complete sequence Length = 171491 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 168174 ctcttcttcctcctcctcttcttcc 168150 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 117950 ctcttcttcctcctcttcttcttc 117927
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 216846 ctcttcttcctcctcctcttcttcc 216822 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 34488 tcttcttcctcctcctcttcttcc 34465
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence Length = 163721 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 56948 tctcttcttcctcctcctcttcttc 56924
>ref|NM_001031031.1| Gallus gallus B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A), mRNA Length = 5541 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1757 ctcttcttcctcctcctcttcttcc 1733
>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence Length = 205076 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 105791 ctcttcttcctcctcctcttcttcc 105815
>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 28109 tctcttcttcctcctcttcttcttc 28133
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 32308 tctcttcttcctcctcttcttcttc 32284
>ref|NM_022394.1| Rattus norvegicus scaffold attachment factor B (Safb), mRNA Length = 3113 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 924 ctcttcttcctcctcttcttcttcc 900
>ref|NM_006885.2| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 11893 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2125 ctcttcttcctcctcctcttcttcc 2101
>ref|XM_471734.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2046 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1914 ctcttcttcctcctcttcttcttcc 1890
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence Length = 159541 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 31175 ctcttcttcctcctcttcttcttcc 31151
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 177646 ctcttcttcctcctcctcttcttcc 177622
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 ggcttatgataagcatggaaa 362 ||||||||||||||||||||| Sbjct: 706427 ggcttatgataagcatggaaa 706447
>gb|AF005370.1| Alcelaphine herpesvirus 1 L-DNA, complete sequence Length = 130608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 117768 ctcttcttcctcctcctcttcttcc 117792
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 62150 ctcttcttcctcctcctcttcttcc 62174
>gb|AC100427.25| Mus musculus chromosome 10, clone RP23-136J15, complete sequence Length = 206339 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 cttcttcctcctcgtcttcttcccc 48 ||||||||||||| ||||||||||| Sbjct: 59514 cttcttcctcctcctcttcttcccc 59490 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttcccc 48 |||||||||||| ||||||||||| Sbjct: 59684 ttcttcctcctcctcttcttcccc 59661 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttcccc 48 |||||||||||| ||||||||||| Sbjct: 59603 ttcttcctcctcctcttcttcccc 59580
>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence Length = 202071 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 11235 ctcttcttcctcctcctcttcttcc 11259
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 37640 ctcttcttcctcctcctcttcttcc 37616
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 345147 ctcttcttcctcctcctcttcttcc 345171
>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9, MGSPI-15528, MGSPI-15530 complete sequence Length = 235497 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1607 ctcttcttcctcctcctcttcttcc 1631
>ref|XM_430201.1| PREDICTED: Gallus gallus hypothetical gene supported by CR390104 (LOC424931), mRNA Length = 2454 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 1445 tcttcctcctcgtcttcttcc 1425
>ref|XM_363379.1| Magnaporthe grisea 70-15 hypothetical protein (MG01305.4) partial mRNA Length = 474 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 207 ctcttcttcctcctcctcttcttcc 183
>gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, complete sequence Length = 173506 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 105142 ctcttcttcctcctcctcttcttcc 105166
>gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence Length = 166801 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 120087 ctcttcttcctcctcctcttcttcc 120111
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 135374 ctcttcttcctcctcctcttcttcc 135398
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 33026 ctcttcttcctcctcctcttcttcc 33002
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 146084 ctcttcttcctcctcctcttcttcc 146060
>gb|BC071848.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:4635625), complete cds Length = 1466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 100 ctcttcttcctcctcgtcttc 80
>gb|BC060716.1| Mus musculus connector enhancer of kinase suppressor of Ras 2, mRNA (cDNA clone MGC:67575 IMAGE:6405389), complete cds Length = 5434 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2925 ctcttcttcctcctcctcttcttcc 2901
>gb|BC043093.1| Mus musculus connector enhancer of kinase suppressor of Ras 2, mRNA (cDNA clone MGC:58012 IMAGE:6405389), complete cds Length = 5434 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2925 ctcttcttcctcctcctcttcttcc 2901
>ref|XM_457300.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B07920g) partial mRNA Length = 642 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||| ||||||||||| Sbjct: 520 tctcttcttcctcttcgtcttcttc 496
>ref|NM_198303.2| Mus musculus eukaryotic translation initiation factor 5B (Eif5b), mRNA Length = 7797 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 1910 tctcttcttcctcctcctcttcttc 1886
>gb|DQ440272.1| Aedes aegypti clone AET-3489 nucleosome assembly protein NAP-17 mRNA, complete cds Length = 1188 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1035 ctcttcttcctcctcctcttcttcc 1011
>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence Length = 193151 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 113994 ctcttcttcctcctcttcttcttcc 113970
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 3096 ctcttcttcctcctcctcttcttcc 3120
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence Length = 157998 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 62719 ctcttcttcctcctcctcttcttcc 62695
>gb|AC141426.3| Mus musculus BAC clone RP23-280I14 from chromosome 12, complete sequence Length = 227835 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 209800 ctcttcttcctcctcctcttcttcc 209776
>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence Length = 181238 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 126110 ctcttcttcctcctcttcttcttcc 126086 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttctt 44 |||||||||||||||| ||||||| Sbjct: 126048 tctcttcttcctcctcctcttctt 126025
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence Length = 190516 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 5922 ctcttcttcctcctcctcttcttcc 5898
>gb|AY557985.1| Saccharomyces cerevisiae clone FLH005233.01X YMR043W gene, complete cds Length = 861 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 320 tcttcctcctcgtcttcttcc 300
>gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, complete sequence Length = 227529 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 106132 tctcttcttcctcctcctcttcttc 106156
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 62540 ctcttcttcctcctcttcttcttcc 62564
>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence Length = 207503 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 197967 ctcttcttcctcctcctcttcttcc 197943
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 214667 ctcttcttcctcctcctcttcttcc 214691 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 214949 ctcttcttcctcctcctcttcttc 214972 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 214868 ctcttcttcctcctcctcttcttc 214891 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 214799 ctcttcttcctcctcttcttcttc 214822 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 214700 ctcttcttcctcctcctcttcttc 214723
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 46997 ctcttcttcctcctcctcttcttcc 46973
>gb|AC004593.1| Homo sapiens PAC clone RP5-964C11 from 7, complete sequence Length = 150221 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 118174 ctcttcttcctcctcttcttcttcc 118198
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 99656 ctcttcttcctcctcctcttcttcc 99632 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 99623 ctcttcttcctcctcctcttcttc 99600 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 99524 ctcttcttcctcctcttcttcttc 99501 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 99455 ctcttcttcctcctcctcttcttc 99432 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 99374 ctcttcttcctcctcctcttcttc 99351
>ref|XM_857646.1| PREDICTED: Canis familiaris similar to PGC-1 related co-activator, transcript variant 2 (LOC477805), mRNA Length = 4914 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 4077 ctcttcttcctcctcatcttcttcc 4101
>ref|XM_534998.2| PREDICTED: Canis familiaris similar to PGC-1 related co-activator, transcript variant 1 (LOC477805), mRNA Length = 5283 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 4440 ctcttcttcctcctcatcttcttcc 4464
>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research Institute) complete sequence Length = 256354 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 7620 ctcttcttcctcctcttcttcttcc 7596
>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete sequence Length = 137003 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 102963 ctcttcttcctcctcctcttcttcc 102939 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 106780 tcttcttcctcctcctcttcttcc 106803
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 3155 tcttcctcctcgtcttcttcc 3175
>gb|AC131801.3| Mus musculus BAC clone RP24-538A12 from chromosome 10, complete sequence Length = 158745 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 61341 ctcttcttcctcctcctcttcttcc 61317
>ref|XM_541766.2| PREDICTED: Canis familiaris similar to synapsin II isoform IIb (LOC484652), mRNA Length = 1959 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1695 ctcttcttcctcctcctcttcttcc 1719
>ref|XM_747906.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g16330) partial mRNA Length = 2367 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2298 ctcttcttcctcctcctcttcttcc 2274 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 2327 tcttcttcctcctcttcttcttcc 2304 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 2312 tcttcttcctcctcctcttcttcc 2289
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 165206 ctcttcttcctcctcctcttcttcc 165230
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 47818 ctcttcttcctcctcctcttcttcc 47794
>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete sequence Length = 155214 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 72409 tctcttcttcctcctcttcttcttc 72433 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 153364 ctcttcttcctcctcctcttcttc 153341
>ref|XM_803117.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504009.60) partial mRNA Length = 3405 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttc 45 ||||||||||||||||||||| Sbjct: 1884 ttcttcctcctcgtcttcttc 1864
>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence Length = 218074 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 135794 ctcttcttcctcctcctcttcttcc 135770
>gb|AC122445.3| Mus musculus BAC clone RP24-233P3 from chromosome 17, complete sequence Length = 173130 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 168784 ctcttcttcctcctcttcttcttcc 168760 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 168867 tcttcttcctcctcttcttcttcc 168844
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence Length = 138622 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 93927 tctcttcttcctcctcctcttcttc 93951
>ref|XM_816231.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510629.310) partial mRNA Length = 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttccc 47 |||||||||||||| |||||||||| Sbjct: 674 tcttcttcctcctcttcttcttccc 650
>gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, RP23-193K14, complete sequence Length = 214157 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 152458 ctcttcttcctcctcctcttcttcc 152434
>emb|BX950201.12| Zebrafish DNA sequence from clone CH211-101L11 in linkage group 1, complete sequence Length = 167099 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttc 45 ||||||||||||||||||||| Sbjct: 132979 ttcttcctcctcgtcttcttc 132959
>gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome 8, complete sequence Length = 179058 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 39579 ctcttcttcctcctcctcttcttcc 39555
>gb|BT000999.1| Arabidopsis thaliana clone U09601 unknown protein (At1g49890) mRNA, complete cds Length = 2011 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 189 ctcttcttcctcctcttcttcttcc 213
>gb|AC125404.4| Mus musculus BAC clone RP23-10A1 from 12, complete sequence Length = 209092 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 44547 ctcttcttcctcctcctcttcttcc 44571
>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence Length = 225940 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 28928 ctcttcttcctcctcctcttcttcc 28904
>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence Length = 167771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 25637 ctcttcttcctcctcctcttcttcc 25613
>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence Length = 212273 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 73888 ctcttcttcctcctcttcttcttcc 73864
>ref|XM_546874.2| PREDICTED: Canis familiaris similar to Ran-binding protein 10, transcript variant 1 (LOC489754), mRNA Length = 1937 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 1248 ctcttcttcctcctcgtcttc 1268
>ref|XM_859234.1| PREDICTED: Canis familiaris similar to Ran-binding protein 10, transcript variant 4 (LOC489754), mRNA Length = 1895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 1245 ctcttcttcctcctcgtcttc 1265
>ref|XM_859214.1| PREDICTED: Canis familiaris similar to Ran-binding protein 10, transcript variant 3 (LOC489754), mRNA Length = 1868 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 1242 ctcttcttcctcctcgtcttc 1262
>ref|XM_859192.1| PREDICTED: Canis familiaris similar to Ran-binding protein 10, transcript variant 2 (LOC489754), mRNA Length = 1841 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 1191 ctcttcttcctcctcgtcttc 1211
>gb|BC023985.2| Homo sapiens KIAA1285 protein, mRNA (cDNA clone MGC:2381 IMAGE:2820826), complete cds Length = 2189 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||| |||| Sbjct: 613 ctcttcttcctcctcgtcttgttcc 589
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 29489 ctcttcttcctcctcctcttcttcc 29465
>gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, complete sequence Length = 73888 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||| |||| Sbjct: 11933 ctcttcttcctcctcgtcttgttcc 11957
>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence Length = 199240 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 56681 tctcttcttcctcctcctcttcttc 56705
>gb|AC115768.9| Mus musculus chromosome 19, clone RP23-107E10, complete sequence Length = 212161 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 173855 ctcttcttcctcctcctcttcttcc 173879
>ref|XM_673497.1| Plasmodium berghei strain ANKA hypothetical protein (PB000699.02.0) partial mRNA Length = 4290 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2751 ctcttcttcctcctcctcttcttcc 2727 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2724 ctcttcttcctcctcctcttcttcc 2700 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 2765 tcttcttcctcctcctcttcttcc 2742
>gb|AC109261.7| Mus musculus chromosome 17, clone RP23-23D19, complete sequence Length = 227994 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 206868 ctcttcttcctcctcctcttcttcc 206892
>ref|XM_662335.1| Cryptosporidium hominis TU502 transmembrane protein 17 (Chro.50157) partial mRNA Length = 1101 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 972 ctcttcttcctcctcttcttcttcc 948
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 74383 tctcttcttcctcctcctcttcttc 74359
>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190140 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 154307 ctcttcttcctcctcctcttcttcc 154331
>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence Length = 205852 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 133918 ctcttcttcctcctcctcttcttcc 133942 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 133933 ctcttcttcctcctcctcttcttc 133956
>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence Length = 178784 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 136849 ctcttcttcctcctcctcttcttcc 136825
>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete sequence Length = 205985 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 179259 ctcttcttcctcctcctcttcttcc 179235
>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237247 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 106146 ctcttcttcctcctcttcttcttcc 106170
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland Research Institute) complete sequence Length = 143705 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 67570 ctcttcttcctcctcctcttcttcc 67546
>emb|CR937051.2|RN394C12 Rattus norvegicus chromosome 1 BAC CH230-394C12, complete sequence Length = 130117 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 90401 ctcttcttcctcctcttcttcttcc 90377
>gb|AC119163.23| Mus musculus chromosome 3, clone RP24-527P22, complete sequence Length = 202675 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 15385 ctcttcttcctcctcctcttcttcc 15409 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 15400 ctcttcttcctcctcctcttcttc 15423
>ref|XM_795364.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC587510 (LOC587510), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| |||||||| Sbjct: 1365 ctcttcttcctcctcgacttcttcc 1341
>gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-547A5, complete sequence Length = 175512 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 9278 ctcttcttcctcctcctcttcttcc 9302
>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete sequence Length = 165686 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 91768 ctcttcttcctcctcctcttcttcc 91792
>gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, complete sequence Length = 182922 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 112511 ctcttcttcctcctcttcttcttcc 112487
>emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 on chromosome 1p33-34.3 Contains the 3' end of a novel gene, the AK2 gene for adenylate kinase 2, the gene for ornithine decarboxylase-like (ODC-p) and a CpG island, complete sequence Length = 150997 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 80251 tctcttcttcctcctcttcttcttc 80227
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene Length = 40050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||| |||||||||||| Sbjct: 37010 ctcttcttcctcttcgtcttcttcc 37034
>gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's Hospital Oakland Research Institute) complete sequence Length = 235343 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 147275 ctcttcttcctcctcttcttcttcc 147299
>ref|XM_790266.1| PREDICTED: Strongylocentrotus purpuratus similar to cystathionase isoform 1 (LOC590669), partial mRNA Length = 2118 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||| |||||||| Sbjct: 1062 ctcttcttcctcctcgacttcttcc 1038
>emb|Z48502.1|SC9532X S.cerevisiae chromosome XIII cosmid 9532 Length = 24105 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 11368 tcttcctcctcgtcttcttcc 11348
>gb|AC073562.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-201H14, complete sequence Length = 235252 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 210577 ctcttcttcctcctcctcttcttcc 210553
>gb|AY046022.1| Arabidopsis thaliana unknown protein (At1g49890) mRNA, complete cds Length = 2529 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 396 ctcttcttcctcctcttcttcttcc 420
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 76122 tctcttcttcctcctcttcttcttc 76098
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 ||||||||||||| ||||||||||| Sbjct: 622221 tctcttcttcctcttcgtcttcttc 622197
>gb|AC164299.2| Mus musculus BAC clone RP23-313K8 from chromosome 1, complete sequence Length = 160562 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 104267 ctcttcttcctcctcttcttcttcc 104291
>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5' end of the Alox12e gene for epidermal arachidonate lipoxygenase, the gene for arachidonate 15-lipoxygenase, a novel pseudogene, two genes for novel proteins (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S ribosomal protein pseudogene, a NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the gene for a novel protein similar to Beta-arrestin 2 (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for chemokine (C-X-C motif) ligand 16, the gene for a novel protein similar to human zinc finger MYND domain containg 15 (ZMYND15), the 5' end of the gene for a novel protein (2010003F10Rik) and three CpG islands, complete sequence Length = 193277 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 76757 ctcttcttcctcctcttcttcttcc 76781
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 64165 ctcttcttcctcctcttcttcttcc 64141
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 60702 ctcttcttcctcctcttcttcttcc 60678
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 272324 ctcttcttcctcctcttcttcttcc 272348 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 272298 tcttcttcctcctcttcttcttcc 272321
>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete sequence Length = 170807 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 154225 ctcttcttcctcctcctcttcttcc 154249
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 106970 ctcttcttcctcctcttcttcttcc 106946
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 7187 ctcttcttcctcctcttcttcttcc 7163
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 75951 ctcttcttcctcctcctcttcttcc 75927 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 157228 tcttcttcctcctcttcttcttcc 157251
>emb|AL662793.10| Mouse DNA sequence from clone RP23-186D6 on chromosome 11 Contains two novel genes, the Cpeb4 gene for cytoplasmic polyadenylation element binding protein 4, the 5' end of a novel gene and two CpG islands, complete sequence Length = 215152 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 203151 ctcttcttcctcctcctcttcttcc 203127
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 17650 ctcttcttcctcctcctcttcttcc 17674
>emb|AJ851441.1| Gallus gallus mRNA for hypothetical protein, clone 3a6 Length = 5541 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 1757 ctcttcttcctcctcctcttcttcc 1733
>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence Length = 203826 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 18296 ctcttcttcctcctcttcttcttcc 18272
>emb|AL662908.7| Mouse DNA sequence from clone RP23-478O10 on chromosome 11 Contains two NACHT, leucine rich repeat and PYD containing 1 (NALP1) pseudogenes, complete sequence Length = 96115 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 19066 ctcttcttcctcctcctcttcttcc 19090
>gb|BC057359.1| Mus musculus RIKEN cDNA 4930432J16 gene, mRNA (cDNA clone MGC:67213 IMAGE:6836034), complete cds Length = 4259 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 3895 ctcttcttcctcctcctcttcttcc 3871
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 28161 ctcttcttcctcctcctcttcttcc 28185
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 22329 ctcttcttcctcctcctcttcttcc 22353 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 22314 ctcttcttcctcctcctcttcttcc 22338
>gb|AC154602.3| Mus musculus BAC clone RP23-343M11 from chromosome 17, complete sequence Length = 196564 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 52994 ctcttcttcctcctcctcttcttcc 53018 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttc 45 ||||||||||||||| |||||||| Sbjct: 53009 ctcttcttcctcctcctcttcttc 53032
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cctactacgaaaccctggggg 184 ||||||||||||||||||||| Sbjct: 2819304 cctactacgaaaccctggggg 2819284
>ref|NM_031828.1| Rattus norvegicus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (Kcnma1), mRNA Length = 5453 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 627 ctcttcttcctcctcctcttcttcc 651
>dbj|AK128966.1| Mus musculus cDNA fis, clone TRACH3013766 Length = 3466 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2881 ctcttcttcctcctcttcttcttcc 2857
>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence Length = 221618 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 2412 ctcttcttcctcctcctcttcttcc 2436
>dbj|AK074515.1| Homo sapiens cDNA FLJ90034 fis, clone HEMBA1001794, moderately similar to ZINC FINGER PROTEIN 84 Length = 1821 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||| |||| Sbjct: 438 ctcttcttcctcctcgtcttgttcc 414
>dbj|AK075032.1| Homo sapiens cDNA FLJ90551 fis, clone OVARC1000779, weakly similar to ZINC FINGER PROTEIN 157 Length = 1655 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 |||||||||||||||||||| |||| Sbjct: 646 ctcttcttcctcctcgtcttgttcc 622
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete sequence Length = 200329 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 112169 ctcttcttcctcctcttcttcttcc 112193
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttc 42 ||||||||||||||||||||| Sbjct: 320607 ctcttcttcctcctcgtcttc 320587
>gb|AC160397.9| Mus musculus 6 BAC RP23-279I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 173003 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 32668 ctcttcttcctcctcctcttcttcc 32692
>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231946 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 186378 ctcttcttcctcctcctcttcttcc 186402
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 15179 ctcttcttcctcctcctcttcttcc 15155
>gb|AC023403.9| Homo sapiens chromosome 8, clone RP11-563N12, complete sequence Length = 193461 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 93186 ctcttcttcctcctcctcttcttcc 93210
>gb|AC090685.8| Homo sapiens chromosome 17, clone RP11-252O24, complete sequence Length = 171140 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 133162 ctcttcttcctcctcctcttcttcc 133186
>dbj|AK145146.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930003I10 product:Similar to translation initiation factor IF2 (Fragment) homolog [Mus musculus], full insert sequence Length = 2482 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tctcttcttcctcctcgtcttcttc 45 |||||||||||||||| |||||||| Sbjct: 1797 tctcttcttcctcctcctcttcttc 1773
>gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, complete sequence Length = 136500 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ttcttcctcctcgtcttcttc 45 ||||||||||||||||||||| Sbjct: 37671 ttcttcctcctcgtcttcttc 37651
>gb|AC096708.3| Homo sapiens chromosome 18, clone RP11-861L17, complete sequence Length = 179824 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 caccccccaaatctcttcttc 30 ||||||||||||||||||||| Sbjct: 140848 caccccccaaatctcttcttc 140868
>gb|AC079141.7| Homo sapiens BAC clone RP11-502A23 from 4, complete sequence Length = 171273 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttccc 47 |||||||||||||| |||||||||| Sbjct: 24358 tcttcttcctcctcctcttcttccc 24334 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 24234 tcttcttcctcctcctcttcttcc 24211
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 tccaggccaggctggtgcacccgga 254 ||||||||||||||||||| ||||| Sbjct: 891406 tccaggccaggctggtgcagccgga 891430
>ref|XM_704508.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 3 (LOC567082), mRNA Length = 6759 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 4538 tcttcctcctcgtcttcttcc 4558
>ref|XM_686352.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 1 (LOC567082), mRNA Length = 6738 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 4517 tcttcctcctcgtcttcttcc 4537
>ref|XM_704507.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 2 (LOC567082), mRNA Length = 6690 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tcttcctcctcgtcttcttcc 46 ||||||||||||||||||||| Sbjct: 4469 tcttcctcctcgtcttcttcc 4489
>ref|XM_627761.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_4290), partial mRNA Length = 11418 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctcttcttcctcctcgtcttcttcc 46 ||||||||||||||| ||||||||| Sbjct: 9840 ctcttcttcctcctcttcttcttcc 9864 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcttcttcctcctcgtcttcttcc 46 |||||||||||||| ||||||||| Sbjct: 9814 tcttcttcctcctcttcttcttcc 9837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,188,814 Number of Sequences: 3902068 Number of extensions: 6188814 Number of successful extensions: 169345 Number of sequences better than 10.0: 841 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 164503 Number of HSP's gapped (non-prelim): 4841 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)