Clone Name | bart38h12 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squal... | 29 | 6.7 | 2 | DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-) | 29 | 8.7 |
---|
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 207 EEEEQRHGCPGHPHGRFLDSCGALC 133 EE+E+ HG G HGRFL + A+C Sbjct: 139 EEDEREHGV-GFVHGRFLQNLRAIC 162
>DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 740 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 349 HYLRGSMAAIYSLLRHASCPESLFFHFLAAAPGDGELRAALG 474 HY GS + + + SC +S+ FH+ + DG R +G Sbjct: 419 HYKEGSKSDVTRTIVFLSCSDSVDFHYEVFSSHDGNHRGLVG 460 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,630,316 Number of Sequences: 219361 Number of extensions: 667331 Number of successful extensions: 1984 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1984 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)