>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion|
           degradation protein 2) (Homozygously deleted in
           neuroblastoma 1)
          Length = 1302

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = +1

Query: 112 ESAQKP*PA--AQLPMAANSNPSPSAGGD---VPTPALPPVRLAAGQAATIQPSSPRY 270
           ES+  P P+  + +P+   S  SPS       VP+  L P   A+G AA  QPSSPRY
Sbjct: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRY 330

>SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 133 PAAQLP-MAANSNPSPSAG--GDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 300
           PA Q P +   SNP P A   G  PTP LPP   +A  AA ++P + +Y    +A KD+
Sbjct: 59  PATQPPPLLPPSNPGPDATVVGSAPTPLLPP---SATAAAKMEPEN-KYLPELMAEKDS 113

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +1

Query: 106 REESAQKP*PAAQLPMAANSNPSPSAGGDVPTP-ALPPVRLAAGQAATIQPSSPR 267
           RE  A +P P    P  A   P P  G   P P A P  R AA Q    +P  PR
Sbjct: 191 RERPAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGP-RPGGPR 244

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 298 ASSHHRRIA--IAVDLSDESAFAVRWAVQNYLRPGDAVVLLHV 420
           ASS  R     + +DLS ES  A  WAV   LR GD ++++ V
Sbjct: 424 ASSSKRNCTYFLTLDLSSESLHAAEWAVGILLRNGDTLIIVDV 466

>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPS-----SPRYFFSSLAGKD 297
           P + +P     +P PS     PTP+ PP  +      +  PS      P Y+ S++   +
Sbjct: 94  PPSPIPPTPTPSPPPSPIPPTPTPSPPPSPIPPTPTPSPPPSPSPLGEPMYYPSNIDTNE 153

Query: 298 ASSHHRRIAIAVDLSDESAFAVRW 369
           A  +  R   A D +  + +AV W
Sbjct: 154 ALINFLRPLCATDRT-RATYAVPW 176

>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
 Frame = +1

Query: 91   PE*TRREESAQKP*P-------AAQLPMAANSNPSPSAGGDVPTPALPPVRLAA----GQ 237
            PE    +E+   P P       +AQ+P  A   P P+   D PTP+  P +LA+     +
Sbjct: 1278 PEEPEPDEAESSPDPQALWFNISAQMPCNAAPTPPPAVSEDQPTPS--PQQLASSKPMNR 1335

Query: 238  AATIQPSSPRYFFSS-LAG 291
             +   P SP  F S+ LAG
Sbjct: 1336 PSAANPCSPVQFSSTPLAG 1354

>POP1_HUMAN (Q99575) Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5)|
           (hPOP1)
          Length = 1024

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  ASPHPTPPRIKSATEKSRNKLGEKSQRKNPSQ 136
           A P PTP + KS TE    K+G+K +RK+  +
Sbjct: 360 ADPLPTPSQEKSQTELPDEKIGKKRKRKDDGE 391

>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2|
          Length = 902

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 32/114 (28%), Positives = 47/114 (41%)
 Frame = +1

Query: 82  REIPE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSS 261
           R+  E      SA  P  AA  P +A +  +PS+    P PA P     A + AT  P+ 
Sbjct: 173 RKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGASPASRPAT--PAR 230

Query: 262 PRYFFSSLAGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVR 423
           P    ++   K   SH     +   + D+ A   R+A Q +L   D     +VR
Sbjct: 231 PDDRNNAAKHKTRGSH----VMVAGVEDDDA-TKRFAGQLHLSAADRARRSNVR 279

>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2|
          Length = 916

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 32/114 (28%), Positives = 47/114 (41%)
 Frame = +1

Query: 82  REIPE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSS 261
           R+  E      SA  P  AA  P +A +  +PS+    P PA P     A + AT  P+ 
Sbjct: 187 RKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGASPASRPAT--PAR 244

Query: 262 PRYFFSSLAGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVR 423
           P    ++   K   SH     +   + D+ A   R+A Q +L   D     +VR
Sbjct: 245 PDDRNNAAKHKTRGSH----VMVAGVEDDDA-TKRFAGQLHLSAADRARRSNVR 293

>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 100 TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAA--GQAATIQPSSP 264
           T +    + P PAA+ P  +   P P++     TPA+PP   AA    AA+  PS P
Sbjct: 83  TGQNPPQETPPPAAESPAPSVPTPPPTS-----TPAVPPADAAAPPAVAASTPPSPP 134

>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 139 AQLPMAANSNPS-PSAGGDVPT-PALPPVRLAAGQAATIQPSSP 264
           + LP +   NP  PS G D+ + PAL   R +AG  A   P+SP
Sbjct: 419 SSLPQSPPENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSP 462

>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2|
          Length = 906

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +1

Query: 67  DQIRHREIPE*TRREESAQKP*P-----AAQLPMAANSNPSPSAGGDVPTP--ALPPVRL 225
           D++R  EI    R EE A K        AA+   AA S P+P+     PTP  A P  R 
Sbjct: 148 DRVRDEEIQR-KRDEEQAAKDRAEAERKAAEEAAAAASAPAPAPVAAAPTPSAAAPAARA 206

Query: 226 AAGQAATIQPSSP 264
            +  ++  +PS P
Sbjct: 207 PSSPSSAPRPSRP 219

>GBF1_HUMAN (Q92538) Golgi-specific brefeldin A-resistance guanine nucleotide|
            exchange factor 1 (BFA-resistant GEF 1)
          Length = 1859

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +1

Query: 133  PAAQLPMAANSNPSPSAGGDVPTPALPP---VRLAAGQAATIQPSSPRYFFSSLAGKDAS 303
            P  Q P+A  S    SA GD  TP  PP   +    G     +P SPR   SS  G   +
Sbjct: 1730 PQGQKPLA--SAHLTSAAGDTRTPGHPPPPEIPSELGACDFEKPESPRAASSSSPGSPVA 1787

Query: 304  SHHRRIAIAVD 336
            S   R++   D
Sbjct: 1788 SSPSRLSPTPD 1798

>SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 300
           P   LP +A + P  + GG  PTP LPP   +A  +  ++P + +Y    +A KD+
Sbjct: 63  PPPLLPPSA-TGPDATVGGPAPTPLLPP---SATASVKMEPEN-KYLPELMAEKDS 113

>YCX1_CHLRE (P05723) Hypothetical 12.2 kDa protein in 16S rRNA region|
          Length = 111

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 166 NPSPSA--GGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRIAIAVDL 339
           NP P A   G +P P +PPV        T  PS PR  F+S A K   S  ++      +
Sbjct: 48  NPIPLAVMRGGIPLPGMPPV-------PTATPSLPRSGFTSSAKKIKESRKQKSTALQAV 100

Query: 340 SDE 348
            D+
Sbjct: 101 KDQ 103

>NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) (DNedd4)|
          Length = 1007

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
 Frame = +1

Query: 136 AAQLPMAANSNPSPSAGGDVPTPALPPVRLA---AGQAATIQP----SSPRYFFSSLAGK 294
           AA LP+ ++S  S  AGGDVP P  PP R A   AGQ  T Q      +PR   +++   
Sbjct: 11  AAALPVPSSS--SSVAGGDVPRP--PPRRRAASVAGQQQTRQEFGNGYTPRRSLAAVNDS 66

Query: 295 DASSHHRRIAI 327
             S H R + +
Sbjct: 67  GDSCHLRIVVL 77

>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +1

Query: 151 MAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPR---YFFSSLAGKDASSHH 312
           MA  +   P+A     T ALPP   A   A  + P++ R      SS AG  A+ HH
Sbjct: 336 MAPENGVPPAAAAAAATAALPPAAAAVAAAPEVPPAASRRESLAASSTAG--ANDHH 390

>PHOSP_PI3B (P06163) Phosphoprotein (Protein P)|
          Length = 596

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1

Query: 473 TETGMEPQSAP*RTEVGRTWRSTTASPGRR*FCTAQRTAKADSSERSTAMAMRRWWEEA 297
           +E+G   +S    +++  + +S T  PGR    +  +T K D  ER       R+ E A
Sbjct: 300 SESGSRTESTSQNSQIPTSGKSNTVGPGRTTLESRIKTQKTDGKEREDTEESTRFTERA 358

>ROBO3_MOUSE (Q9Z2I4) Roundabout homolog 3 precursor (Retinoblastoma-inhibiting|
            gene 1) (Rig-1)
          Length = 1366

 Score = 25.4 bits (54), Expect(2) = 6.7
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = +1

Query: 187  GDVPTPALPPV----RLAAGQAATIQPSSPR 267
            GD+P P LPP     +LA G A + Q   PR
Sbjct: 1265 GDLPPPPLPPPELRDKLALGSAGSRQHVFPR 1295



 Score = 22.3 bits (46), Expect(2) = 6.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 41   ASPHPTPPRIKSATEKSRNKLGE 109
            ASP P P    SA  ++R   GE
Sbjct: 1215 ASPSPVPSTASSAPGRTRQVTGE 1237

>SRBS1_HUMAN (Q9BX66) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
           (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
           (SH3P12)
          Length = 1292

 Score = 26.9 bits (58), Expect(2) = 6.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 184 GGDVPTPALPPVRLAAGQAATIQPSSPRYF 273
           GGD+P   L  ++  +  A+T    SPR+F
Sbjct: 688 GGDIPLQGLSGLKRPSSSASTKDSESPRHF 717



 Score = 20.8 bits (42), Expect(2) = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVP 198
           P+A +P ++  +P+P    + P
Sbjct: 629 PSANVPQSSAISPTPEISSETP 650

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 106 REESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALP 213
           +++ + KP P+ Q    A++   PSAGG+ P PA+P
Sbjct: 66  KKKPSPKPQPSPQQQTKASA---PSAGGETPRPAVP 98

>IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2|
          Length = 346

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 286 AGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVRPT 429
           AG +A +  R   +  DLS ES +A+ + +   +  GD V ++H  P+
Sbjct: 202 AGAEAGNQ-RSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVHWEPS 248

>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 115 SAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 264
           +A+ P PAA  P A  +NP+  A     T A PP   A   A    P+ P
Sbjct: 221 AAETPAPAAN-PPAPTANPTGPAANPPATTANPPAPAANPSAPAATPTGP 269



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 264
           PAA+ P  A + P+P+A    P  A PP   A   A    PS+P
Sbjct: 220 PAAETPAPAANPPAPTANPTGPA-ANPPATTANPPAPAANPSAP 262

>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc)
          Length = 943

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPTPA-LPPVRLAAGQAATIQPSSPRYFFSS 282
           PA  LP A ++ P+P       TP  +PP    +G  A +      YF SS
Sbjct: 54  PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGGPAGYFLSS 104

>S12A2_SQUAC (P55013) Solute carrier family 12 member 2 (Bumetanide-sensitive|
           sodium-(potassium)-chloride cotransporter 1) (NA-K-CL
           symporter) (NKCC)
          Length = 1191

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQA 240
           PA+   + + S P P AG   P P   P+R  A Q+
Sbjct: 6   PASSAGVQSQSGPEPGAGQQEPPPPATPLRPVASQS 41

>VGLC_VZVS (P10241) Glycoprotein GPV|
          Length = 591

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
 Frame = +1

Query: 115 SAQKP*PAAQLPMAANSNPSP-----SAGGDVPTPALPPVRLAAGQ---AATIQPSSPRY 270
           +++KP PA     AA   P P     SA    P PA+ P   A  +   AA  Q S P +
Sbjct: 123 ASRKPDPAVAPTSAATRKPDPAVAPTSAATRNPDPAVAPTSAATRKPDPAANAQHSQPPF 182

Query: 271 FFSSL 285
            F ++
Sbjct: 183 LFENI 187

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 13/56 (23%)
 Frame = +1

Query: 100 TRRE--ESAQKP*P-----------AAQLPMAANSNPSPSAGGDVPTPALPPVRLA 228
           TRR    SAQ P P           AA  P AA    SP   G  P PALP VRL+
Sbjct: 26  TRRSGPTSAQTPAPPQPTQPPPGPAAASGPGAAGPASSPPPAGPGPGPALPAVRLS 81

>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 133 PAAQLP-MAANSNPSPSAG--GDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 300
           PA Q P +   S P P A   G  PTP LPP   +A  A  ++P + +Y    +A KD+
Sbjct: 59  PATQPPPLLPPSTPGPDATVVGSAPTPLLPP---SATAAVKMEPEN-KYLPELMAEKDS 113

>TONB_PSEAE (Q51368) Protein tonB|
          Length = 342

 Score = 25.0 bits (53), Expect(2) = 7.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 124 KP*PAAQLPMAANSNPSPSAGGDVPTPAL 210
           KP P  +    A+S PSPS+    P P +
Sbjct: 196 KPKPEPEPSTEASSQPSPSSAAPPPAPTV 224



 Score = 22.7 bits (47), Expect(2) = 7.6
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 38  SASPHPTPPRIKS-ATEKSRNKLGEKSQRK 124
           +A+P PTPP+I+    E  + K  EK + K
Sbjct: 145 AAAPEPTPPKIEEPKPEPPKPKPVEKPKPK 174

>MUTL_LACPL (Q88UZ8) DNA mismatch repair protein mutL|
          Length = 678

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 23/71 (32%), Positives = 35/71 (49%)
 Frame = +1

Query: 142 QLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRI 321
           QL M  N+  S     D  TPA      A+  AAT+QPSS     S+ + + ++ +  R 
Sbjct: 349 QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVSTTSAQPSAVN--RA 406

Query: 322 AIAVDLSDESA 354
           A++  +  ESA
Sbjct: 407 AVSAVVPSESA 417

>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +1

Query: 100 TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 264
           +++E     P  A  LP  A   P+P   GD+P P  PP     G      P  P
Sbjct: 553 SQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPP 607

>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082|
          Length = 721

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +1

Query: 148 PMAANSNPSPSAGGDV-----PTPALPPVRLAAGQAATIQPSSP 264
           P AA + P P+ G D+       PA PP        A + PSSP
Sbjct: 416 PAAAPAGPLPAYGADLRPPVTTPPATPPTPTGPISGAAVTPSSP 459

>VGLC_VZVD (P09256) Glycoprotein GPV|
          Length = 560

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
 Frame = +1

Query: 115 SAQKP*PAAQLPMAANSNPSP-----SAGGDVPTPALPPVRLAAGQ---AATIQPSSPRY 270
           + +KP PA     AA+  P P     SA    P PA+ P   A+ +   AA  Q S P +
Sbjct: 92  ATRKPDPAVAPTSAASRKPDPAVAPTSAATRKPDPAVAPTSAASRKPDPAANTQHSQPPF 151

Query: 271 FFSSL 285
            + ++
Sbjct: 152 LYENI 156

>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 133 PAAQLPMAANSNPSPSAGGDVPT---PALPPVRLAAGQAATIQPSSP 264
           PA    +  ++ PSP   G  PT   P++PP     G  A   PS P
Sbjct: 47  PAVPSGLPPSATPSPVPFGPTPTGMYPSVPPTGPPPGPPAPFPPSGP 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,354,601
Number of Sequences: 219361
Number of extensions: 693564
Number of successful extensions: 4823
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4769
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)