ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470240.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 3 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 62 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 63 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 122 Query: 313 ctggctccg 321 ||||||||| Sbjct: 123 ctggctccg 131 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 247 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 288
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 2759406 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 2759347 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 2759346 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 2759287 Query: 313 ctggctccg 321 ||||||||| Sbjct: 2759286 ctggctccg 2759278 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 2759162 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 2759121 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 490 gccgctcgagtgcgccgtctgcctctccgagttcgcg 526 |||||||||||||||||| |||||| ||||||||||| Sbjct: 4599215 gccgctcgagtgcgccgtgtgcctcgccgagttcgcg 4599179 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcgc 525 ||||||||||||| ||||||||| |||||||||| Sbjct: 15506854 cgctcgagtgcgcggtctgcctcgccgagttcgc 15506887
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 2759516 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 2759457 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 2759456 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 2759397 Query: 313 ctggctccg 321 ||||||||| Sbjct: 2759396 ctggctccg 2759388 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 2759272 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 2759231 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 490 gccgctcgagtgcgccgtctgcctctccgagttcgcg 526 |||||||||||||||||| |||||| ||||||||||| Sbjct: 4599330 gccgctcgagtgcgccgtgtgcctcgccgagttcgcg 4599294 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcgc 525 ||||||||||||| ||||||||| |||||||||| Sbjct: 15501388 cgctcgagtgcgcggtctgcctcgccgagttcgc 15501421
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 31362 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 31303 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 31302 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 31243 Query: 313 ctggctccg 321 ||||||||| Sbjct: 31242 ctggctccg 31234 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 31118 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 31077
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 104325 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 104266 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 104265 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 104206 Query: 313 ctggctccg 321 ||||||||| Sbjct: 104205 ctggctccg 104197 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 104081 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 104040
>dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E06, full insert sequence Length = 1144 Score = 153 bits (77), Expect = 7e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 193 ggcggcgccgccgccgtacgtcagcccgtcggcggcgttccccatcgcgatcgtcatcgc 252 |||| |||| |||||||||| || |||| |||| | |||||||||||||||||| ||||| Sbjct: 41 ggcgtcgcccccgccgtacgacaacccgacggctgggttccccatcgcgatcgtgatcgc 100 Query: 253 cgtcggcttcatggtcacctcgctcatcctcgtcagctactacctgctcgtcgtccgctg 312 | |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||| Sbjct: 101 catcgggttcatggtcacctcgctcatcctcgccagctactacttcctcgtcgtccgctg 160 Query: 313 ctggctccg 321 ||||||||| Sbjct: 161 ctggctccg 169 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 422 ggcggggtcgacccggacgtcgtcgccgcgctccccgtcgtc 463 |||||| |||||||||||||||| || ||||||||||||||| Sbjct: 285 ggcgggctcgacccggacgtcgtggcggcgctccccgtcgtc 326
>ref|NM_187669.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 490 gccgctcgagtgcgccgtctgcctctccgagttcgcg 526 |||||||||||||||||| |||||| ||||||||||| Sbjct: 387 gccgctcgagtgcgccgtgtgcctcgccgagttcgcg 423
>dbj|AK058578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F04, full insert sequence Length = 1249 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 490 gccgctcgagtgcgccgtctgcctctccgagttcgcg 526 |||||||||||||||||| |||||| ||||||||||| Sbjct: 484 gccgctcgagtgcgccgtgtgcctcgccgagttcgcg 520
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 490 gccgctcgagtgcgccgtctgcctctccgagttcgcg 526 |||||||||||||||||| |||||| ||||||||||| Sbjct: 40170 gccgctcgagtgcgccgtgtgcctcgccgagttcgcg 40134
>ref|NM_190747.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| ||||||||||||||||||||| Sbjct: 472 gagtgcgccatctgcctctccgagttcgcgc 502
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| ||||||||||||||||||||| Sbjct: 37498942 gagtgcgccatctgcctctccgagttcgcgc 37498972 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgt 213 ||||||||||||||||||||| Sbjct: 38483134 ggcggcgccgccgccgtacgt 38483114 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cgccgggggcggcgccgccg 205 |||||||||||||||||||| Sbjct: 29598860 cgccgggggcggcgccgccg 29598841 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 22822245 cgggggcggcgccgccgccg 22822226
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| ||||||||||||||||||||| Sbjct: 93479 gagtgcgccatctgcctctccgagttcgcgc 93509
>dbj|AK108924.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H11, full insert sequence Length = 935 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| ||||||||||||||||||||| Sbjct: 529 gagtgcgccatctgcctctccgagttcgcgc 559
>ref|XM_470813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1254 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcgc 525 ||||||||||||| ||||||||| |||||||||| Sbjct: 446 cgctcgagtgcgcggtctgcctcgccgagttcgc 479
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcgc 525 ||||||||||||| ||||||||| |||||||||| Sbjct: 6405 cgctcgagtgcgcggtctgcctcgccgagttcgc 6438
>gb|AY065576.1| Zea mays clone tac 902.7a 3' Ac insertion site sequence Length = 450 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 489 agccgctcgagtgcgccgtctgcctctccgagttcgc 525 ||||| |||| |||||||||||||||| ||||||||| Sbjct: 350 agccgttcgactgcgccgtctgcctctgcgagttcgc 314
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 403 cgacgccgaccagctgcccggcggggtcg 431 ||||||||||||||||||||||| ||||| Sbjct: 1133717 cgacgccgaccagctgcccggcgtggtcg 1133745 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gcgccgggggcggcgccgccgccgt 209 ||||||||||||||||||| ||||| Sbjct: 4811657 gcgccgggggcggcgccgcggccgt 4811681 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cggacgcgccgggggcggcg 199 |||||||||||||||||||| Sbjct: 4544367 cggacgcgccgggggcggcg 4544348
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 493 gctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||||| |||||||| Sbjct: 6070874 gctcgagtgcgccgtctgcctcagcgagttcg 6070843
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 493 gctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||||| |||||||| Sbjct: 75373 gctcgagtgcgccgtctgcctcagcgagttcg 75342
>dbj|AK108491.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G02, full insert sequence Length = 1700 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 493 gctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||||| |||||||| Sbjct: 484 gctcgagtgcgccgtctgcctcagcgagttcg 515
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| |||||||| |||||||||||| Sbjct: 1549 gagtgcgccatctgcctcgccgagttcgcgc 1519
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| |||||||| |||||||||||| Sbjct: 112155 gagtgcgccatctgcctcgccgagttcgcgc 112125
>ref|XM_541732.2| PREDICTED: Canis familiaris similar to carbohydrate (chondroitin 4) sulfotransferase 13 (LOC484618), mRNA Length = 1047 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 343 cccgcgcacgcgccgcgacgagc 365 ||||||||||||||||||||||| Sbjct: 726 cccgcgcacgcgccgcgacgagc 748
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 cgtcggcggcgttccccatcgcgatcg 245 ||||||||||||||||||| ||||||| Sbjct: 262949 cgtcggcggcgttccccattgcgatcg 262923
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagtt 522 ||||||||||||| ||||||||| ||||||| Sbjct: 6261387 cgctcgagtgcgcggtctgcctcgccgagtt 6261417 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 cgagtgcgccgtctgcctctccgagttcg 524 |||||||||| ||||||||||||| |||| Sbjct: 29525865 cgagtgcgccatctgcctctccgacttcg 29525837 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgccg 208 ||||||||||||||||||||| Sbjct: 18747051 ccgggggcggcgccgccgccg 18747071
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| |||||||| |||||||||||| Sbjct: 21655529 gagtgcgccatctgcctcgccgagttcgcgc 21655499 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 495 tcgagtgcgccgtctgcctctccgagttcg 524 |||| |||||||||||||||| |||||||| Sbjct: 12584590 tcgactgcgccgtctgcctctgcgagttcg 12584619 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgccg 208 ||||||||||||||||||||| Sbjct: 19974053 ccgggggcggcgccgccgccg 19974073 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||| || |||||||| Sbjct: 17736972 cgctcgagtgcgccgtctgcatcagcgagttcg 17736940 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 12315969 cgggggcggcgccgccgccg 12315950
>dbj|AK108361.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C10, full insert sequence Length = 931 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgcgc 527 ||||||||| |||||||| |||||||||||| Sbjct: 416 gagtgcgccatctgcctcgccgagttcgcgc 446
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagtt 522 ||||||||||||| ||||||||| ||||||| Sbjct: 33929 cgctcgagtgcgcggtctgcctcgccgagtt 33959
>emb|AL606989.3|OSJN00120 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence Length = 121591 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagtt 522 ||||||||||||| ||||||||| ||||||| Sbjct: 31053 cgctcgagtgcgcggtctgcctcgccgagtt 31083
>ref|XM_450749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 495 tcgagtgcgccgtctgcctctccgagttcg 524 |||| |||||||||||||||| |||||||| Sbjct: 449 tcgactgcgccgtctgcctctgcgagttcg 478
>ref|XM_969426.1| PREDICTED: Tribolium castaneum similar to trinucleotide repeat containing 9 (LOC663375), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 gccgggggcggcgccgccgccg 208 |||||||||||||||||||||| Sbjct: 1460 gccgggggcggcgccgccgccg 1439
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 495 tcgagtgcgccgtctgcctctccgagttcg 524 |||| |||||||||||||||| |||||||| Sbjct: 50528 tcgactgcgccgtctgcctctgcgagttcg 50557
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 495 tcgagtgcgccgtctgcctctccgagttcg 524 |||| |||||||||||||||| |||||||| Sbjct: 99917 tcgactgcgccgtctgcctctgcgagttcg 99946
>dbj|AB045121.1| Oryza sativa (japonica cultivar-group) RRF1 mRNA for RING finger 1, complete cds Length = 1453 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 495 tcgagtgcgccgtctgcctctccgagttcg 524 |||| |||||||||||||||| |||||||| Sbjct: 543 tcgactgcgccgtctgcctctgcgagttcg 572
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 tccgcgccagcggcgccagcc 338 ||||||||||||||||||||| Sbjct: 933032 tccgcgccagcggcgccagcc 933052
>ref|NM_121766.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G17600 mRNA, complete cds Length = 1243 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ctcatcctcgtcagctactac 295 ||||||||||||||||||||| Sbjct: 235 ctcatcctcgtcagctactac 255
>ref|XM_483020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||| |||||| |||||||| Sbjct: 425 cgctcgagtgcgccgtgtgcctcagcgagttcg 457
>gb|DQ216881.1| Taeniopygia guttata clone 0058P0007H10 insulin-like growth factor binding protein 7-like mRNA, complete sequence Length = 997 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 gccgccgccgtacgtcagcccgtcg 223 ||||| ||||||||||||||||||| Sbjct: 309 gccgctgccgtacgtcagcccgtcg 285
>gb|DQ216880.1| Taeniopygia guttata clone 0058P0041D07 insulin-like growth factor binding protein 7-like mRNA, complete sequence Length = 1085 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 gccgccgccgtacgtcagcccgtcg 223 ||||| ||||||||||||||||||| Sbjct: 396 gccgctgccgtacgtcagcccgtcg 372
>ref|NM_197864.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0003O19.23), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgc 525 ||||||||||| ||||||||||| ||||| Sbjct: 475 gagtgcgccgtgtgcctctccgacttcgc 503
>ref|XM_450948.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||| || |||||||| Sbjct: 365 cgctcgagtgcgccgtctgcatcagcgagttcg 397
>ref|NM_196156.1| Oryza sativa (japonica cultivar-group) putative phosphate-induced protein (OSJNBa0095C06.7), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgccg 208 |||||||||| |||||||||||||| Sbjct: 267 cgcgccggggccggcgccgccgccg 291
>ref|XM_463557.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 687 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgt 213 ||||||||||||||||||||| Sbjct: 393 ggcggcgccgccgccgtacgt 373
>ref|XM_473669.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 496 cgagtgcgccgtctgcctctccgagttcg 524 |||||||||| ||||||||||||| |||| Sbjct: 318 cgagtgcgccatctgcctctccgacttcg 346
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 167 gcggcgggcctggcggacgcgccgggggcggcg 199 ||||||||| |||||| |||| ||||||||||| Sbjct: 1054735 gcggcgggcatggcgggcgcggcgggggcggcg 1054767
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence Length = 233720 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 atcgtcatcgccgtcggcttc 262 ||||||||||||||||||||| Sbjct: 65570 atcgtcatcgccgtcggcttc 65550
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cgccgggggcggcgccgccgccgta 210 |||||| |||||||||||||||||| Sbjct: 91858 cgccggcggcggcgccgccgccgta 91882
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccgtcggcttcatggtcacct 272 ||||||||||||||||||||| Sbjct: 1614988 ccgtcggcttcatggtcacct 1615008
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 Length = 233755 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 atcgtcatcgccgtcggcttc 262 ||||||||||||||||||||| Sbjct: 54247 atcgtcatcgccgtcggcttc 54267
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 gcgccagcggcgccagcctgc 341 ||||||||||||||||||||| Sbjct: 324614 gcgccagcggcgccagcctgc 324594
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 gcgccagcggcgccagcctgc 341 ||||||||||||||||||||| Sbjct: 237337 gcgccagcggcgccagcctgc 237317
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gcgccagcggcgccagcctgc 341 ||||||||||||||||||||| Sbjct: 312734 gcgccagcggcgccagcctgc 312754
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 496 cgagtgcgccgtctgcctctccgagttcg 524 |||||||||| ||||||||||||| |||| Sbjct: 28554 cgagtgcgccatctgcctctccgacttcg 28526
>emb|AL391151.1|ATK10A8 Arabidopsis thaliana DNA chromosome 5, BAC clone K10A8 (ESSA project) Length = 43387 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ctcatcctcgtcagctactac 295 ||||||||||||||||||||| Sbjct: 24550 ctcatcctcgtcagctactac 24530
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gcgccagcggcgccagcctgc 341 ||||||||||||||||||||| Sbjct: 4902721 gcgccagcggcgccagcctgc 4902741
>gb|AE005974.1| Caulobacter crescentus CB15 section 300 of 359 of the complete genome Length = 10270 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 gcggcggcgggcctggcggacgcgc 188 ||||||||||||||||||| ||||| Sbjct: 5537 gcggcggcgggcctggcggccgcgc 5561
>gb|AE005851.1| Caulobacter crescentus CB15 section 177 of 359 of the complete genome Length = 10661 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgtcggcttcatggtcacct 272 ||||||||||||||||||||| Sbjct: 5455 ccgtcggcttcatggtcacct 5435
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgccg 208 |||||||||| |||||||||||||| Sbjct: 58151 cgcgccggggccggcgccgccgccg 58175
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cgccgggggcggcgccgccgccgta 210 |||||| |||||||||||||||||| Sbjct: 21434108 cgccggcggcggcgccgccgccgta 21434132 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cggcgccgccgccgtacgtc 214 |||||||||||||||||||| Sbjct: 9318861 cggcgccgccgccgtacgtc 9318842
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgc 525 ||||||||||| ||||||||||| ||||| Sbjct: 22298461 gagtgcgccgtgtgcctctccgacttcgc 22298489 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgccg 208 |||||||||| |||||||||||||| Sbjct: 11474158 cgcgccggggccggcgccgccgccg 11474182 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 19126345 cgggggcggcgccgccgccg 19126326
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||| |||||| |||||||| Sbjct: 23914273 cgctcgagtgcgccgtgtgcctcagcgagttcg 23914305 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 22990095 cgcgccaggggcggcgccgccgcc 22990118
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgc 525 ||||||||||| ||||||||||| ||||| Sbjct: 115704 gagtgcgccgtgtgcctctccgacttcgc 115732
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgt 213 ||||||||||||||||||||| Sbjct: 3815 ggcggcgccgccgccgtacgt 3795
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgt 213 ||||||||||||||||||||| Sbjct: 68549 ggcggcgccgccgccgtacgt 68529
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||| |||||| |||||||| Sbjct: 105977 cgctcgagtgcgccgtgtgcctcagcgagttcg 106009
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgccg 208 ||||||||||||||||||||| Sbjct: 30692 ccgggggcggcgccgccgccg 30712
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgccg 208 ||||||||||||||||||||| Sbjct: 48201 ccgggggcggcgccgccgccg 48221
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||||||| || |||||||| Sbjct: 45606 cgctcgagtgcgccgtctgcatcagcgagttcg 45574
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 492 cgctcgagtgcgccgtctgcctctccgagttcg 524 |||||||||||||||| |||||| |||||||| Sbjct: 47424 cgctcgagtgcgccgtgtgcctcagcgagttcg 47456
>dbj|AK059974.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A04, full insert sequence Length = 964 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgc 525 ||||||||||| ||||||||||| ||||| Sbjct: 372 gagtgcgccgtgtgcctctccgacttcgc 400
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gagtgcgccgtctgcctctccgagttcgc 525 ||||||||||| ||||||||||| ||||| Sbjct: 22310529 gagtgcgccgtgtgcctctccgacttcgc 22310557 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgccg 208 |||||||||| |||||||||||||| Sbjct: 11480598 cgcgccggggccggcgccgccgccg 11480622 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 19137621 cgggggcggcgccgccgccg 19137602
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cgccgggggcggcgccgccgccgta 210 |||||| |||||||||||||||||| Sbjct: 21744307 cgccggcggcggcgccgccgccgta 21744331 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cggcgccgccgccgtacgtc 214 |||||||||||||||||||| Sbjct: 9390558 cggcgccgccgccgtacgtc 9390539
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgccg 208 |||||||| |||||||||||||||| Sbjct: 3994641 cgcgccggcggcggcgccgccgccg 3994665
>emb|AJ937760.1| Uncultured candidate division WS3 bacterium fosmid clone b1bcf1.1.f04 Length = 37923 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 437 gacgtcgtcgccgcgctccccgtcg 461 |||||||||||||||||| |||||| Sbjct: 25635 gacgtcgtcgccgcgctcgccgtcg 25611
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 193 ggcggcgccgccgccgtacgtcagc 217 |||||||||||||||||||| |||| Sbjct: 1098036 ggcggcgccgccgccgtacggcagc 1098012
>ref|NM_111226.4| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G03550 mRNA, complete cds Length = 1483 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tcatcctcgtcagctactac 295 |||||||||||||||||||| Sbjct: 341 tcatcctcgtcagctactac 360
>ref|XM_482857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 844 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 508 cgcgccaggggcggcgccgccgcc 531
>ref|XM_482856.1| Oryza sativa (japonica cultivar-group), mRNA Length = 653 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 317 cgcgccaggggcggcgccgccgcc 340
>ref|XM_450704.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 47 cgggggcggcgccgccgccg 28
>ref|NM_197303.1| Oryza sativa (japonica cultivar-group) putative kinase (OSJNBa0005K07.3), mRNA Length = 2082 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 453 cgggggcggcgccgccgccg 472
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gcgcacgcgccgcgacgagc 365 |||||||||||||||||||| Sbjct: 2377586 gcgcacgcgccgcgacgagc 2377605
>ref|NM_191719.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgccgggggcggcgccgccg 205 |||||||||||||||||||| Sbjct: 783 cgccgggggcggcgccgccg 802
>ref|NM_192540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 306 cgggggcggcgccgccgccg 325
>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0008E02, complete sequence Length = 152974 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cggcgccgccgccgtacgtc 214 |||||||||||||||||||| Sbjct: 9262 cggcgccgccgccgtacgtc 9243
>ref|XM_365745.1| Magnaporthe grisea 70-15 hypothetical protein (MG02447.4) partial mRNA Length = 6018 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cgtctcggccgtcttcttca 395 |||||||||||||||||||| Sbjct: 5775 cgtctcggccgtcttcttca 5794
>gb|DQ443375.1| Bombyx mori mitochondrial aldehyde dehydrogenase mRNA, complete cds; nuclear gene for mitochondrial product Length = 1835 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgggggcggcgccgccgcc 207 |||||||||||||||||||| Sbjct: 1260 ccgggggcggcgccgccgcc 1241
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tggacgcggcggcgggcctggcgg 182 |||||||||||||||||| ||||| Sbjct: 537198 tggacgcggcggcgggccgggcgg 537175
>gb|AC009895.4|ATAC009895 Arabidopsis thaliana chromosome III BAC T21P5 genomic sequence, complete sequence Length = 82289 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tcatcctcgtcagctactac 295 |||||||||||||||||||| Sbjct: 8863 tcatcctcgtcagctactac 8882
>gb|AC009327.8|ATAC009327 Arabidopsis thaliana chromosome III BAC T12J13 genomic sequence, complete sequence Length = 89934 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tcatcctcgtcagctactac 295 |||||||||||||||||||| Sbjct: 74580 tcatcctcgtcagctactac 74599
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ccggacgtcgtcgccgcgct 453 |||||||||||||||||||| Sbjct: 1098114 ccggacgtcgtcgccgcgct 1098133
>emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on chromosome 13 Contains a novel gene, complete sequence Length = 198959 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cctccccgtttcaagttttc 66 |||||||||||||||||||| Sbjct: 133448 cctccccgtttcaagttttc 133467
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccgggggcggcgccgccgccg 208 ||||||| |||||||||||||||| Sbjct: 81435 gcgccggcggcggcgccgccgccg 81458
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccgggggcggcgccgccgccg 208 ||||||| |||||||||||||||| Sbjct: 194470 gcgccggcggcggcgccgccgccg 194493
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccgggggcggcgccgccgccg 208 ||||||| |||||||||||||||| Sbjct: 65553 gcgccggcggcggcgccgccgccg 65576
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gcggcgccgccgccgtacgtcagcccgtcggcggcg 229 |||||||||| | || ||||||||||||||||||| Sbjct: 135083 gcggcgccgctggcgcccgtcagcccgtcggcggcg 135048
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggcggacgcgccgggggcggcgccgccg 205 |||||||| |||||| |||||||||||| Sbjct: 348703 ggcggacgtgccgggcgcggcgccgccg 348730
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acgcgccgggggcggcgccg 202 |||||||||||||||||||| Sbjct: 259605 acgcgccgggggcggcgccg 259586
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 gtcgacccggacgtcgtcgccgcg 451 |||||||||| ||||||||||||| Sbjct: 1087282 gtcgacccggccgtcgtcgccgcg 1087259
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ccggacgtcgtcgccgcgct 453 |||||||||||||||||||| Sbjct: 67733 ccggacgtcgtcgccgcgct 67752
>tpg|BK005030.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 27 (WRKY27) gene, complete cds Length = 2308 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 983 cgggggcggcgccgccgccg 1002
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 78916 cgggggcggcgccgccgccg 78897
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggacgcgccgggggcgg 197 |||||||||||||||||||| Sbjct: 4858266 ggcggacgcgccgggggcgg 4858247
>gb|S43620.1| c-src {5' region} [chickens, Genomic, 1517 nt] Length = 1517 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||||||||| ||||||||||| Sbjct: 1355 cgcgccgggggccgcgccgccgcc 1332
>gb|S43613.1| c-src {5' region heterogeneity} [chickens, mRNA Partial, 389 nt] Length = 389 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||||||||| ||||||||||| Sbjct: 226 cgcgccgggggccgcgccgccgcc 203
>gb|BT006433.1| Arabidopsis thaliana At3g03550 gene, complete cds Length = 1071 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tcatcctcgtcagctactac 295 |||||||||||||||||||| Sbjct: 212 tcatcctcgtcagctactac 231
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgcc 207 |||||||||||||||||||| Sbjct: 25237740 ccgggggcggcgccgccgcc 25237759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gccgggaacgggaagccgct 495 |||||||||||||||||||| Sbjct: 8729337 gccgggaacgggaagccgct 8729318
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 25802 cgggggcggcgccgccgccg 25783
>gb|AY085462.1| Arabidopsis thaliana clone 152633 mRNA, complete sequence Length = 1313 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tcatcctcgtcagctactac 295 |||||||||||||||||||| Sbjct: 341 tcatcctcgtcagctactac 360
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 tggacgcggcggcgggcctggcgg 182 |||||||||| ||||||||||||| Sbjct: 4984166 tggacgcggccgcgggcctggcgg 4984189 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcggcggcgttccccatcgc 240 |||||||||||||||||||| Sbjct: 2755038 tcggcggcgttccccatcgc 2755019
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cgccgggggcggcgccgccg 205 |||||||||||||||||||| Sbjct: 68680 cgccgggggcggcgccgccg 68661
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gccgggaacgggaagccgct 495 |||||||||||||||||||| Sbjct: 136384 gccgggaacgggaagccgct 136365
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ggccgggaacgggaagccgc 494 |||||||||||||||||||| Sbjct: 5622989 ggccgggaacgggaagccgc 5622970 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 gccgcgacgagctcgtggaccgcg 377 |||||||||| ||||||||||||| Sbjct: 1143565 gccgcgacgacctcgtggaccgcg 1143588
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 139634 cgggggcggcgccgccgccg 139615
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gccgggaacgggaagccgct 495 |||||||||||||||||||| Sbjct: 28416 gccgggaacgggaagccgct 28397
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggcggcgccgccgccg 208 |||||||||||||||||||| Sbjct: 99523 cgggggcggcgccgccgccg 99504
>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome Length = 12825 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 acccggacgtcgtcgccgcgctcc 455 |||||| ||||||||||||||||| Sbjct: 9427 acccggccgtcgtcgccgcgctcc 9450
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 163933 cgcgccaggggcggcgccgccgcc 163956
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 49823 cgcgccaggggcggcgccgccgcc 49846
>dbj|AK100937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136N21, full insert sequence Length = 845 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 509 cgcgccaggggcggcgccgccgcc 532
>dbj|AK064041.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D01, full insert sequence Length = 652 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgccgggggcggcgccgccgcc 207 |||||| ||||||||||||||||| Sbjct: 316 cgcgccaggggcggcgccgccgcc 339
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 318 tccgcgccagcggcgccagcctgc 341 ||||||||||||||| |||||||| Sbjct: 5856789 tccgcgccagcggcgacagcctgc 5856812
>dbj|AP002989.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-475J2, complete sequence Length = 107893 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cctcctgccatcctcctccc 52 |||||||||||||||||||| Sbjct: 2358 cctcctgccatcctcctccc 2377
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cggacgtcgtcgccgcgctc 454 |||||||||||||||||||| Sbjct: 938288 cggacgtcgtcgccgcgctc 938307
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgggggcggcgccgccgcc 207 |||||||||||||||||||| Sbjct: 25165916 ccgggggcggcgccgccgcc 25165935
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgggggcggcgccgccgcc 207 |||||||||||||||||||| Sbjct: 99450 ccgggggcggcgccgccgcc 99431
>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete sequences Length = 96727 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cctcctgccatcctcctccc 52 |||||||||||||||||||| Sbjct: 77634 cctcctgccatcctcctccc 77653 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,672,723 Number of Sequences: 3902068 Number of extensions: 3672723 Number of successful extensions: 91784 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84851 Number of HSP's gapped (non-prelim): 6933 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
