ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart38g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104158.1| Zea mays PCO135695 mRNA sequence 355 9e-95
2gb|AY789530.1| Oryza sativa (indica cultivar-group) syntaxin rel... 303 3e-79
3ref|NM_187897.1| Oryza sativa (japonica cultivar-group), Ozsa833... 303 3e-79
4dbj|AK068204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 3e-79
5dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
7dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
8gb|AF532627.1| Glycine max syntaxin mRNA, complete cds 86 1e-13
9ref|XM_467346.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
11dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
13dbj|AK071767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
14gb|AC183492.1| Brassica oleracea Contig G, complete sequence 54 4e-04
15gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 48 0.027
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
17dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 46 0.11
19gb|AC174378.9| Medicago truncatula clone mth2-57m5, complete seq... 44 0.43
20gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete se... 44 0.43
21gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete s... 44 0.43
22dbj|AB169894.1| Macaca fascicularis brain cDNA, clone: QnpA-1993... 44 0.43
23gb|AC087771.3|AC087771 Genomic Sequence for Medicago truncatula,... 44 0.43
24gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, com... 44 0.43
25gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosom... 42 1.7
26gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 42 1.7
27gb|U86899.1|MCU86899 Molluscum contagiosum virus subtype 1 clone... 42 1.7
28ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 6.7
29gb|BC059297.1| Xenopus laevis hypothetical protein MGC68884, mRN... 40 6.7
30emb|AL354916.16| Human DNA sequence from clone RP11-26K22 on chr... 40 6.7
31gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, comple... 40 6.7
32gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, com... 40 6.7
33gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, comple... 40 6.7 
>gb|AY104158.1| Zea mays PCO135695 mRNA sequence
          Length = 932

 Score =  355 bits (179), Expect = 9e-95
 Identities = 248/271 (91%)
 Strand = Plus / Plus

                                                                       
Query: 224 cggcgcctcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccacctt 283
           |||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 44  cggcgcgtcgcaggccgtggcgtcgggcgtcttccagatcaacaccgcggttgccacgtt 103

                                                                       
Query: 284 ccagcgcctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggat 343
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 104 ccagcgcctcgtcaacacgctcggcacgcccaaggatacccccgacctccgcgacaggat 163

                                                                       
Query: 344 acacaaaacacgagcacacataacacaacttgtgaaggatacatcggagaagcttaagca 403
           ||| ||||||||   ||||||||||||||| |||||||||||||| || |||||||| ||
Sbjct: 164 acataaaacacggcaacacataacacaactagtgaaggatacatcagacaagcttaaaca 223

                                                                       
Query: 404 agctagtgaggcggatcatcgtcttgaagccagtgctaccaaaaagattgctgatgcgaa 463
           |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||| ||
Sbjct: 224 agctagcgaggcggatcatcgcgttgaagtcagcgctaccaaaaagattgctgatgcaaa 283

                                          
Query: 464 gctagcaaaggatttccaagcagtcctaaaa 494
           |||||| || |||||||||||||||||||||
Sbjct: 284 gctagctaaagatttccaagcagtcctaaaa 314
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>gb|AY789530.1| Oryza sativa (indica cultivar-group) syntaxin related protein
           (Vam3) mRNA, complete cds
          Length = 1284

 Score =  303 bits (153), Expect = 3e-79
 Identities = 231/257 (89%)
 Strand = Plus / Plus

                                                                       
Query: 231 tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
           ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 172 tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 231

                                                                       
Query: 291 ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggatacacaaa 350
           || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 232 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatacacaag 291

                                                                       
Query: 351 acacgagcacacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagt 410
           |||||   ||||||||||||||| |||||||| ||||||||||||||||| |||||||| 
Sbjct: 292 acacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagc 351

                                                                       
Query: 411 gaggcggatcatcgtcttgaagccagtgctaccaaaaagattgctgatgcgaagctagca 470
           ||||| ||||||||| | |||| ||| || | ||||||||||||||||||||||||||||
Sbjct: 352 gaggctgatcatcgtgtcgaagtcagcgccagcaaaaagattgctgatgcgaagctagca 411

                            
Query: 471 aaggatttccaagcagt 487
           |||||||||||||||||
Sbjct: 412 aaggatttccaagcagt 428
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>ref|NM_187897.1| Oryza sativa (japonica cultivar-group), Ozsa8339 predicted mRNA
          Length = 843

 Score =  303 bits (153), Expect = 3e-79
 Identities = 231/257 (89%)
 Strand = Plus / Plus

                                                                       
Query: 231 tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
           ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 97  tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 156

                                                                       
Query: 291 ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggatacacaaa 350
           || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 157 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatacacaag 216

                                                                       
Query: 351 acacgagcacacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagt 410
           |||||   ||||||||||||||| |||||||| ||||||||||||||||| |||||||| 
Sbjct: 217 acacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagc 276

                                                                       
Query: 411 gaggcggatcatcgtcttgaagccagtgctaccaaaaagattgctgatgcgaagctagca 470
           ||||| ||||||||| | |||| ||| || | ||||||||||||||||||||||||||||
Sbjct: 277 gaggctgatcatcgtgtcgaagtcagcgccagcaaaaagattgctgatgcgaagctagca 336

                            
Query: 471 aaggatttccaagcagt 487
           |||||||||||||||||
Sbjct: 337 aaggatttccaagcagt 353
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>dbj|AK068204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136O09, full
           insert sequence
          Length = 1389

 Score =  303 bits (153), Expect = 3e-79
 Identities = 231/257 (89%)
 Strand = Plus / Plus

                                                                       
Query: 231 tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
           ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 278 tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 337

                                                                       
Query: 291 ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggatacacaaa 350
           || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 338 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatacacaag 397

                                                                       
Query: 351 acacgagcacacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagt 410
           |||||   ||||||||||||||| |||||||| ||||||||||||||||| |||||||| 
Sbjct: 398 acacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagc 457

                                                                       
Query: 411 gaggcggatcatcgtcttgaagccagtgctaccaaaaagattgctgatgcgaagctagca 470
           ||||| ||||||||| | |||| ||| || | ||||||||||||||||||||||||||||
Sbjct: 458 gaggctgatcatcgtgtcgaagtcagcgccagcaaaaagattgctgatgcgaagctagca 517

                            
Query: 471 aaggatttccaagcagt 487
           |||||||||||||||||
Sbjct: 518 aaggatttccaagcagt 534
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                         
Query: 231   tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
             ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 53328 tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 53269

                                                                  
Query: 291   ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggat 343
             || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 53268 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggat 53216



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 359   acacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagtgaggcgga 418
             ||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 52515 acacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctga 52456

                    
Query: 419   tcatcgt 425
             |||||||
Sbjct: 52455 tcatcgt 52449



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                          
Query: 443   caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 487
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51815 caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 51771
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                           
Query: 231     tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
               ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 8478175 tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 8478116

                                                                    
Query: 291     ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggat 343
               || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 8478115 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggat 8478063



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                           
Query: 359     acacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagtgaggcgga 418
               ||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 8477362 acacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctga 8477303

                      
Query: 419     tcatcgt 425
               |||||||
Sbjct: 8477302 tcatcgt 8477296



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                            
Query: 443     caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 487
               |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8476662 caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 8476618
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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                         
Query: 231   tcgcaggccgtcgcgtcgggcgtcttccagatcaacacggcggtcgccaccttccagcgc 290
             ||||||||||| |||||||| || ||||||||||||||||||||  | || |||||||| 
Sbjct: 93130 tcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcgg 93071

                                                                  
Query: 291   ctcgtcaacacgctcggcacgcccaaggacacgcccgacctccgcgacaggat 343
             || ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 93070 ctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggat 93018



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 359   acacataacacaacttgtgaaggatacatcggagaagcttaagcaagctagtgaggcgga 418
             ||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 92317 acacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctga 92258

                    
Query: 419   tcatcgt 425
             |||||||
Sbjct: 92257 tcatcgt 92251



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                          
Query: 443   caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 487
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91617 caaaaagattgctgatgcgaagctagcaaaggatttccaagcagt 91573
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>gb|AF532627.1| Glycine max syntaxin mRNA, complete cds
          Length = 1214

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 255 ttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcacgccc 314
           |||||||||||||| || ||| ||||||||||| | ||||||||||| ||||| || |||
Sbjct: 186 ttccagatcaacaccgccgtctccaccttccagagactcgtcaacaccctcggaaccccc 245

                                  
Query: 315 aaggacacgcccgacctccgcga 337
           || ||||| ||||||||||||||
Sbjct: 246 aaagacacccccgacctccgcga 268
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>ref|XM_467346.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1409

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 cgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcac 310
           |||||||||||||| ||| || || ||| ||| ||  |||||| ||||| ||||||| ||
Sbjct: 301 cgtcttccagatcaccaccgccgtggcctcctaccgccgcctcctcaactcgctcgggac 360

                            
Query: 311 gcccaaggacacgcccg 327
           |||||||||||| ||||
Sbjct: 361 gcccaaggacacccccg 377
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                            
Query: 251      cgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcac 310
                |||||||||||||| ||| || || ||| ||| ||  |||||| ||||| ||||||| ||
Sbjct: 28990183 cgtcttccagatcaccaccgccgtggcctcctaccgccgcctcctcaactcgctcgggac 28990124

                                 
Query: 311      gcccaaggacacgcccg 327
                |||||||||||| ||||
Sbjct: 28990123 gcccaaggacacccccg 28990107
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 251   cgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcac 310
             |||||||||||||| ||| || || ||| ||| ||  |||||| ||||| ||||||| ||
Sbjct: 36348 cgtcttccagatcaccaccgccgtggcctcctaccgccgcctcctcaactcgctcgggac 36289

                              
Query: 311   gcccaaggacacgcccg 327
             |||||||||||| ||||
Sbjct: 36288 gcccaaggacacccccg 36272
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>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 251   cgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcac 310
             |||||||||||||| ||| || || ||| ||| ||  |||||| ||||| ||||||| ||
Sbjct: 73241 cgtcttccagatcaccaccgccgtggcctcctaccgccgcctcctcaactcgctcgggac 73182

                              
Query: 311   gcccaaggacacgcccg 327
             |||||||||||| ||||
Sbjct: 73181 gcccaaggacacccccg 73165
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>dbj|AK071767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113L24, full
           insert sequence
          Length = 1408

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 cgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcac 310
           |||||||||||||| ||| || || ||| ||| ||  |||||| ||||| ||||||| ||
Sbjct: 301 cgtcttccagatcaccaccgccgtggcctcctaccgccgcctcctcaactcgctcgggac 360

                            
Query: 311 gcccaaggacacgcccg 327
           |||||||||||| ||||
Sbjct: 361 gcccaaggacacccccg 377
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>gb|AC183492.1| Brassica oleracea Contig G, complete sequence
          Length = 236640

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   cagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggcacgcccaag 317
             ||||||||||||   ||| ||| |||||| || ||||||||||| ||||| || ||||| 
Sbjct: 47452 cagatcaacacgagcgtctccagcttccaacgactcgtcaacactctcggtactcccaaa 47511

                        
Query: 318   gacacgcccga 328
             |||||||||||
Sbjct: 47512 gacacgcccga 47522
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>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence
          Length = 138186

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 471    aaggatttccaagcagtcctaaaa 494
              ||||||||||||||||||||||||
Sbjct: 114658 aaggatttccaagcagtcctaaaa 114681
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 301     cgctcggcacgcccaaggacacgcccgacctccgcg 336
               ||||||||||||||| ||||||||||  ||||||||
Sbjct: 6366095 cgctcggcacgcccagggacacgccctccctccgcg 6366130
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>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0638H11
          Length = 162746

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 301   cgctcggcacgcccaaggacacgcccgacctccgcg 336
             ||||||||||||||| ||||||||||  ||||||||
Sbjct: 33039 cgctcggcacgcccagggacacgccctccctccgcg 33074
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 272    ggtcgccaccttccagcgcctcg 294
              |||||||||||||||||||||||
Sbjct: 650977 ggtcgccaccttccagcgcctcg 650999
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>gb|AC174378.9| Medicago truncatula clone mth2-57m5, complete sequence
          Length = 126476

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 375   gtgaaggatacatcggagaagcttaagcaagctagtga 412
             |||||||||||||| |  |||||||| |||||||||||
Sbjct: 48872 gtgaaggatacatcagccaagcttaaacaagctagtga 48835
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>gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete sequence
          Length = 111277

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 375   gtgaaggatacatcggagaagcttaagcaagctagtga 412
             |||||||||||||| |  |||||||| |||||||||||
Sbjct: 19100 gtgaaggatacatcagccaagcttaaacaagctagtga 19137
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>gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete sequence
          Length = 105458

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 375   gtgaaggatacatcggagaagcttaagcaagctagtga 412
             |||||||||||||| |  |||||||| |||||||||||
Sbjct: 83883 gtgaaggatacatcagccaagcttaaacaagctagtga 83920
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>dbj|AB169894.1| Macaca fascicularis brain cDNA, clone: QnpA-19932, similar to human
            NDRG family member 2 (NDRG2), transcript variant 8, mRNA,
            RefSeq: NM_201541.1
          Length = 2157

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 20   agcccccgccccaaatccctcccctt 45
            |||||| |||||||||||||||||||
Sbjct: 1577 agccccagccccaaatccctcccctt 1552
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>gb|AC087771.3|AC087771 Genomic Sequence for Medicago truncatula, clone 8D15, complete
            sequence
          Length = 69590

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 375  gtgaaggatacatcggagaagcttaagcaagctagtga 412
            ||||||||||| ||||| || ||||| |||||||||||
Sbjct: 9076 gtgaaggatacttcggataaacttaaacaagctagtga 9113



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                        
Query: 249  ggcgtcttccagatcaacacggcggtcgccaccttccagcgcctcgtcaacacgctcggc 308
            ||||| || ||||||||||| || ||| |||| || ||| | ||||| ||||| ||||| 
Sbjct: 8862 ggcgtatttcagatcaacaccgccgtctccacttttcagagactcgttaacactctcgga 8921

                                      
Query: 309  acgcccaaggacacgcccgacctccg 334
            || || || ||||||||||| |||||
Sbjct: 8922 actcctaaagacacgcccgaactccg 8947
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>gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, complete sequence
          Length = 37184

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 234  caggccgtcgcgtcgggcgtcttccagatcaacacggc 271
            ||||| || |||||||| || |||||||||||||||||
Sbjct: 8415 caggcggtggcgtcgggggttttccagatcaacacggc 8452
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>gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosome 19, complete sequence
          Length = 160363

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     caggcgacgcagcccccgccc 30
              |||||||||||||||||||||
Sbjct: 133172 caggcgacgcagcccccgccc 133192
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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 232   cgcaggccgtcgcgtcgggcg 252
             |||||||||||||||||||||
Sbjct: 36968 cgcaggccgtcgcgtcgggcg 36988
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>gb|U86899.1|MCU86899 Molluscum contagiosum virus subtype 1 clone B1-13 homolog of
           vaccinia E2L (B1-13) gene, partial cds
          Length = 995

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 232 cgcaggccgtcgcgtcgggcg 252
           |||||||||||||||||||||
Sbjct: 831 cgcaggccgtcgcgtcgggcg 851
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>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     acctcttcccccacaaaatc 79
              ||||||||||||||||||||
Sbjct: 232055 acctcttcccccacaaaatc 232036
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>gb|BC059297.1| Xenopus laevis hypothetical protein MGC68884, mRNA (cDNA clone
            MGC:68884 IMAGE:4683954), complete cds
          Length = 4649

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  acaaaacacgagcacacata 365
            ||||||||||||||||||||
Sbjct: 3470 acaaaacacgagcacacata 3451
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>emb|AL354916.16| Human DNA sequence from clone RP11-26K22 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 140148

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   gagcacacataacacaactt 374
             ||||||||||||||||||||
Sbjct: 15663 gagcacacataacacaactt 15682
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>gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, complete sequence
          Length = 192886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     ctcttcccccacaaaatcct 81
              ||||||||||||||||||||
Sbjct: 116621 ctcttcccccacaaaatcct 116602
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>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence
          Length = 154169

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   acctcttcccccacaaaatc 79
            ||||||||||||||||||||
Sbjct: 8311 acctcttcccccacaaaatc 8292
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>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence
          Length = 171846

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    ccagtgctaccaaaaagatt 452
              ||||||||||||||||||||
Sbjct: 139672 ccagtgctaccaaaaagatt 139653


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,596,275
Number of Sequences: 3902068
Number of extensions: 2596275
Number of successful extensions: 47621
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47452
Number of HSP's gapped (non-prelim): 169
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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