ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart38g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540 136 4e-32
2STO_ARATH (Q96288) Salt-tolerance protein 132 7e-31
3STH_ARATH (Q9SID1) Salt tolerance-like protein 127 1e-29
4STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600 126 3e-29
5COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3 79 7e-15
6COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4 77 4e-14
7COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1 77 4e-14
8COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2 74 2e-13
9COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15 72 9e-13
10CONS_ARATH (Q39057) Zinc finger protein CONSTANS 72 9e-13
11COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14 70 3e-12
12COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13 68 2e-11
13COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5 66 5e-11
14COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9 62 9e-10
15COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190 62 1e-09
16COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10 61 2e-09
17COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11 55 9e-08
18COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16 50 5e-06
19COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8 49 8e-06
20COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6 49 8e-06
21COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12 49 1e-05
22COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7 44 2e-04
23TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacti... 38 0.019
24TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger pro... 38 0.019
25TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9 38 0.019
26TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite mo... 36 0.054
27ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog 35 0.092
28ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein ... 35 0.12
29TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18) 35 0.16
30TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18) 35 0.16
31TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42 35 0.16
32TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42 35 0.16
33TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif pr... 35 0.16
34TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite mo... 34 0.20
35TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif pr... 34 0.27
36TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic li... 33 0.60
37ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation ... 32 0.78
38IE68_HHV11 (P04485) Immediate-early protein IE68 32 0.78
39ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation fa... 32 0.78
40TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (E... 32 1.0
41ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation ... 32 1.0
42TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-inte... 31 2.3
43TRI45_HUMAN (Q9H8W5) Tripartite motif protein 45 (RING finger pr... 30 3.0
44KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier fami... 30 3.0
45TRI36_MOUSE (Q80WG7) Tripartite motif protein 36 (Haprin) (Acros... 30 3.9
46EGF_MOUSE (P01132) Pro-epidermal growth factor precursor (EGF) [... 30 5.0
47YHJ2_YEAST (P38767) Hypothetical 64.2 kDa protein in SLT2-PUT2 i... 30 5.0
48TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45 29 6.6
49YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in ... 29 6.6
50Y855_TREPA (O83827) Hypothetical protein TP0855 precursor 29 6.6
51PRDX3_BOVIN (P35705) Thioredoxin-dependent peroxide reductase, m... 29 8.6
52TRI36_HUMAN (Q9NQ86) Tripartite motif protein 36 (Zinc-binding p... 29 8.6

>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540|
          Length = 331

 Score =  136 bits (342), Expect = 4e-32
 Identities = 61/111 (54%), Positives = 82/111 (73%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M+++CDVC  E A+V C ADEA+LC  C+ +VH ANKLA KH R +LL   ++  ++  P
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSS--P 58

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSA 468
           LCD+C++++ L+FC +DRAILC DCD  IH+AN+ T KH RFLL G KLSA
Sbjct: 59  LCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSA 109



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>STO_ARATH (Q96288) Salt-tolerance protein|
          Length = 248

 Score =  132 bits (331), Expect = 7e-31
 Identities = 60/110 (54%), Positives = 75/110 (68%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M++QCDVC   PA V+CCADEAALC  C+  +H ANKLA KH+RL L  L     +   P
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSL-----STKFP 55

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLS 465
            CD+C+E+   +FCVEDRA+LC DCDE IH AN  +A H RFL  G K++
Sbjct: 56  RCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105



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>STH_ARATH (Q9SID1) Salt tolerance-like protein|
          Length = 238

 Score =  127 bits (320), Expect = 1e-29
 Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M++QCDVC   PA ++CCADEAALC+ C+  VH ANKLA KH+RL L  L     +   P
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSL-----STKFP 55

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAK--LSADPVDQEI 489
            CD+C E+   +FCVEDRA+LC DCDE  H+ N  +A H RFL  G +  LS+   +QE+
Sbjct: 56  PCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEV 115



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>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600|
          Length = 299

 Score =  126 bits (317), Expect = 3e-29
 Identities = 56/115 (48%), Positives = 77/115 (66%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M++QC+VC    A VLCCADEAALC  C+ ++H ANKLAGKH+R+ L     +  A++ P
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-----SASASSIP 55

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSADPVD 480
            CD+C+E  G  FC++DRA+LC  CD  IH+ N   + H RFLL G K+  + +D
Sbjct: 56  KCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESID 110



 Score = 36.2 bits (82), Expect = 0.054
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +1

Query: 121 SRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGD 300
           S S +   +CD+C        C  D A LC  C+  +H  N     H+R  L  +    +
Sbjct: 48  SASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLE 107

Query: 301 AA-TGP 315
           +  TGP
Sbjct: 108 SIDTGP 113



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>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 39/97 (40%), Positives = 50/97 (51%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C    A + C AD A LC  C+ ++H ANKLA +H R+               LC+V
Sbjct: 8   CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW--------------LCEV 53

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C++    V C  D A LC  CD  IHSAN L+ +H R
Sbjct: 54  CEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +1

Query: 301 AATGPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           A++  LCD CK     +FC  D A LC DCD  IH+AN L ++H R  L
Sbjct: 2   ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQL-DAAGDA 303
           C+VC   PA V C AD AALC  C+R +H AN L+ +H R+ +    DA G A
Sbjct: 51  CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103



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>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 39/97 (40%), Positives = 49/97 (50%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C    AA+ C  D A LC  C+ +VH ANKLA +H R+ +              C+V
Sbjct: 6   CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM--------------CEV 51

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C++    V C  D A LC  CD  IHSAN L  +H R
Sbjct: 52  CEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 88



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +1

Query: 79  SFLFSSFDLPARRASRSIAMRVQ---CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKL 249
           +FL  S D     A++  +   +   C+VC   PA V C AD AALC  C+R +H AN L
Sbjct: 23  AFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPL 82

Query: 250 AGKHRRL 270
           A +H R+
Sbjct: 83  ARRHERV 89



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +1

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           LCD CK     ++C  D A LC  CD  +H+AN L ++H+R
Sbjct: 5   LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHAR 45



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>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 38/97 (39%), Positives = 46/97 (47%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C      V C AD A LCS C+ +VH AN+LA +H R+               +C  
Sbjct: 12  CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVR--------------VCQS 57

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C+      FC  D A LC  CD  IHSAN L  +H R
Sbjct: 58  CERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
 Frame = +1

Query: 79  SFLFSSFDLPA----RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANK 246
           ++L SS D       R ASR   +RV C  C   PAA  C AD A+LC+ C+  +H AN 
Sbjct: 29  AYLCSSCDAQVHAANRLASRHERVRV-CQSCERAPAAFFCKADAASLCTTCDSEIHSANP 87

Query: 247 LAGKHRRLTLLQLD--AAGDAATGPLCD 324
           LA +H+R+ +L +   +    AT   C+
Sbjct: 88  LARRHQRVPILPISEYSYSSTATNHSCE 115



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>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 41/120 (34%), Positives = 55/120 (45%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C      V C AD A LC+ C+ RVH AN++A +H R+               +C  
Sbjct: 16  CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVR--------------VCQS 61

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSADPVDQEIPSPDES 507
           C+       C  D A LC  CD  IHSAN L  +H R  ++   LSA+      PS  ++
Sbjct: 62  CESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPIL--PLSANSCSSMAPSETDA 119



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = +1

Query: 112 RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDA 291
           R ASR   +RV C  C   PAA LC AD A+LC+ C+  +H AN LA +H+R+ +L L A
Sbjct: 48  RVASRHERVRV-CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA 106

Query: 292 AGDAATGP 315
              ++  P
Sbjct: 107 NSCSSMAP 114



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>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 39/109 (35%), Positives = 52/109 (47%)
 Frame = +1

Query: 127 SIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAA 306
           S + RV CD CG   A + C AD A LC PC+++VH AN L+ KH R             
Sbjct: 2   SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR------------- 48

Query: 307 TGPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVG 453
              +CD C      V C  D  ILC +CD  +H +  ++  H R  + G
Sbjct: 49  -SQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96



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>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 34/97 (35%), Positives = 46/97 (47%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C      V C AD A LC  C+ +VH AN++A +H+R+               +C+ 
Sbjct: 20  CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR--------------VCES 65

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C+       C  D A LC  CD  +HSAN L  +H R
Sbjct: 66  CERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102



 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +1

Query: 112 RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQL 285
           R ASR   +RV C+ C   PAA LC AD+A+LC+ C+  VH AN LA +H+R+ +L +
Sbjct: 52  RVASRHKRVRV-CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPI 108



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>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 36/104 (34%), Positives = 49/104 (47%)
 Frame = +1

Query: 142 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLC 321
           V C+ CG   A + C AD A LC PC++ VH AN L+ KH R                +C
Sbjct: 10  VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR--------------SQIC 55

Query: 322 DVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVG 453
           D C +    V C  D  +LC +CD  +H +   +A H R  + G
Sbjct: 56  DNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99



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>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 37/97 (38%), Positives = 50/97 (51%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C    A V C AD A LC  C+++VH AN+L  KH R                LCD 
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR--------------SLLCDS 58

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C E    +FC  +R++LC +CD   H+A+  ++ HSR
Sbjct: 59  CNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSR 93



 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/44 (52%), Positives = 26/44 (59%)
 Frame = +1

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           LCD C     LV+C  D A LC  CD+ +H AN L AKH R LL
Sbjct: 12  LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL 55



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>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 35/97 (36%), Positives = 45/97 (46%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD C    AAV C  D A LC  C+ R+H   +    H R+ +              C+V
Sbjct: 22  CDACKSVTAAVFCRVDSAFLCIACDTRIHSFTR----HERVWV--------------CEV 63

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           C++    V C  D A LC  CD  IHSAN L ++H R
Sbjct: 64  CEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRL 270
           C+VC   PAAV C AD AALC  C+  +H AN LA +H R+
Sbjct: 61  CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = +1

Query: 289 AAGDAATGPLCDVCKERRGLVFCVEDRAILCADCDEPIHS 408
           + G  A    CD CK     VFC  D A LC  CD  IHS
Sbjct: 12  SGGWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS 51



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>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 32/91 (35%), Positives = 44/91 (48%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M   CD CG + + V C +D A LC  C+R VH AN L+ +H R                
Sbjct: 1   MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL-------------- 46

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHS 408
           +C+ C  +   V CVE+R  LC +CD   H+
Sbjct: 47  VCERCNAQPATVRCVEERVSLCQNCDWSGHN 77



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +1

Query: 310 GPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSADP 474
           G +CD C E+R +V+C  D A LC  CD  +HSAN L+ +HSR  LV  + +A P
Sbjct: 2   GYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR-TLVCERCNAQP 55



 Score = 33.9 bits (76), Expect = 0.27
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
 Frame = +1

Query: 109 ARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPC---------NRRVHRANKLAGKH 261
           ++R SR++     C+ C  +PA V C  +  +LC  C         N     ++    +H
Sbjct: 39  SKRHSRTLV----CERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQH 94

Query: 262 RRLTL-LQLDAAGDAATGPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           +R T+         +    +   C +  G   C ++  ++  D D P  +      +  +
Sbjct: 95  KRQTISCYSGCPSSSELASIWSFCLDLAGQSICEQELGMMNIDDDGP--TDKKTCNEDKK 152

Query: 439 FLLVGAKLSADPVDQEIPSPDESS 510
            +LVG+  S+ P    +P    SS
Sbjct: 153 DVLVGS--SSIPETSSVPQGKSSS 174



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>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190|
          Length = 356

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 32/97 (32%), Positives = 46/97 (47%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           C+ C    A V C AD A LC  C+ +VH AN L+G+H R                LCD 
Sbjct: 14  CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTV--------------LCDS 59

Query: 328 CKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           CK +  +V C + +  LC  C++  H     +++H R
Sbjct: 60  CKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +1

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           +C+ CK  R +V+C+ D A LC  CD  +HSAN L+ +H R +L
Sbjct: 13  VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 142 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           V CD C  +P  V C   +  LC  CN + H     + +HRR  L
Sbjct: 55  VLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRRRDL 97



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>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M   CD CG + + V C +D A LC  C+R VH AN L+ +H R                
Sbjct: 1   MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL-------------- 46

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSA-NDLTAKHSR 438
           +C+ C  +   V C ++R  LC +CD   H   N  T  H +
Sbjct: 47  VCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88



 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +1

Query: 310 GPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSADP 474
           G +CD C E+R +V+C  D A LC  CD  +HSAN L+ +HSR  LV  + +A P
Sbjct: 2   GYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSR-TLVCERCNAQP 55



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 109 ARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVH--RANKLAGKHRRLTL 276
           ++R SR++     C+ C  +PA+V C  +  +LC  C+   H  + +     H+R T+
Sbjct: 39  SKRHSRTLV----CERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTI 92



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>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 28/85 (32%), Positives = 38/85 (44%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M  +CD CG E A + C +D A LC  C+  VH AN L+ +H R                
Sbjct: 1   MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR--------------SL 46

Query: 316 LCDVCKERRGLVFCVEDRAILCADC 390
           LC+ C  +   V C+ +   LC  C
Sbjct: 47  LCEKCSLQPTAVHCMNENVSLCQGC 71



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = +1

Query: 319 CDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           CD C   + L++C  D A LC +CD  +HSAN L+ +H+R LL
Sbjct: 5   CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47



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>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = +1

Query: 301 AATGPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           A T   CD C +RR   +C  D A LC  CD  +HSAN L  +H R  L
Sbjct: 11  AKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           CD C    A   C AD+A LC  C+  VH AN LA +H R+ L
Sbjct: 17  CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59



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>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +1

Query: 319 CDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAKLSAD 471
           C++C  +  + +C  D A LC  CDE +HSAN +  KH R  L   ++S D
Sbjct: 15  CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISND 65



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATG 312
           C++C  + A   C +D+A LC  C+  VH AN +A KH R+ L   + + D   G
Sbjct: 15  CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGG 69



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>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 24/58 (41%), Positives = 29/58 (50%)
 Frame = +1

Query: 283 LDAAGDAATGPLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGA 456
           L +A    T   CD C +RR   +C  D A LC  CD  +HSAN L  +H R  L  A
Sbjct: 5   LASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDA 291
           CD C    A   C AD+A LC  C+  VH AN LA +H R+ L    A
Sbjct: 17  CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASA 64



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>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +1

Query: 313 PLCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           P CD C   + L++C  D A LC +CD  +HSAN L+ +H R L+
Sbjct: 3   PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI 47



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +1

Query: 136 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 315
           M  +CD C    A + C +D A LC  C+  VH AN L+ +H R                
Sbjct: 1   MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR--------------SL 46

Query: 316 LCDVCKERRGLVFCVEDRAILCADC 390
           +C+ C  +   + C++++   C  C
Sbjct: 47  ICEKCFSQPAAIRCLDEKVSYCQGC 71



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>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 319 CDVCKER-RGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           CD C +R R   +C  D A LC  CD  IHSAN L  +H R  L
Sbjct: 22  CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 148 CDVCGLEP-AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           CD C     A+  C AD+A LC  C+  +H AN LA +H R+ L
Sbjct: 22  CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65



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>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING|
           finger protein)
          Length = 710

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
 Frame = +1

Query: 115 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLD 288
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR +   Q  
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGR 216

Query: 289 AAGDAATGPL--CDVCKERRGLVFCVEDRAILCADC-DEPIHSANDLTAKHSRFLLVGAK 459
            +   +   +  C   +     ++CV+ +  +C  C +E  HS++++ A  + + L  ++
Sbjct: 217 VSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQ 276

Query: 460 LS 465
           LS
Sbjct: 277 LS 278



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>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)|
          Length = 710

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
 Frame = +1

Query: 115 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLD 288
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR +   Q  
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGR 216

Query: 289 AAGDAATGPL--CDVCKERRGLVFCVEDRAILCADC-DEPIHSANDLTAKHSRFLLVGAK 459
            +   +   +  C   +     ++CV+ +  +C  C +E  HS++++ A  + + L  ++
Sbjct: 217 VSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQ 276

Query: 460 LS 465
           LS
Sbjct: 277 LS 278



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>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9|
          Length = 817

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
 Frame = +1

Query: 115 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLD 288
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR +   Q  
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGR 216

Query: 289 AAGDAATGPL--CDVCKERRGLVFCVEDRAILCADC-DEPIHSANDLTAKHSRFLLVGAK 459
            +   +   +  C   +     ++CV+ +  +C  C +E  HS++++ A  + + L  ++
Sbjct: 217 VSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQ 276

Query: 460 LS 465
           LS
Sbjct: 277 LS 278



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>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)|
          Length = 685

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
 Frame = +1

Query: 112 RRASRSIAMRVQCDVCGLEP---AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQ 282
           R +S   + R+ C  C  +P   A   C   E + C  C R  H   K    HR    L 
Sbjct: 107 RPSSAMSSERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHR----LV 162

Query: 283 LDAAGDAATGPLCDVCKERRGLVFCVEDRAILCADC-------DEPIHSAND 417
              +     G  C   +  +  ++CV D  ++CA C       D  + S ND
Sbjct: 163 EPVSDTHLRGITCLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLND 214



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>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog|
          Length = 539

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 115 RASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQ 282
           R S+   + ++CD      A + C   ++ LC  C+   H  N L+ KHRR+ L +
Sbjct: 97  RYSKERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVLS-KHRRIPLTE 151



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 319 CDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLL 447
           CD   E   +++C    + LC  C E  HS N L +KH R  L
Sbjct: 108 CDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPL 149



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>ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein 1 (Double|
           FYVE-containing protein 1) (Tandem FYVE fingers-1) (SR3)
          Length = 777

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
 Frame = +1

Query: 106 PARRASRSIAMRVQCDVCGLEPAAVLCCADEAAL-CSPCNRRVHRANKLAGKHRRLTLLQ 282
           PA +      M  +   C     A+  C +  +L C  C   +HR  +L   H R+ L  
Sbjct: 7   PAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRN-HERIRL-- 63

Query: 283 LDAAGDAATGPLCDVCK---------ERRGLVFCVEDRAILCADCDEPIHSAND 417
                     P CD+CK          +R +V C   +  LC +C +  HS  +
Sbjct: 64  -----KPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGN 112



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>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)|
          Length = 667

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = +1

Query: 127 SIAMRVQCDVCGLEPA---AVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAG 297
           S A +V C  C  +PA      C   E + C  C +  H   K    HR +  +      
Sbjct: 112 SSAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIP----D 167

Query: 298 DAATGPLCDVCKERRGLVFCVEDRAILCADC 390
               G +C   ++ +  ++CV D  ++CA C
Sbjct: 168 SHIRGLMCLEHEDEKVNMYCVTDDQLICALC 198



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>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)|
          Length = 667

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = +1

Query: 127 SIAMRVQCDVCGLEPA---AVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAG 297
           S A +V C  C  +PA      C   E + C  C +  H   K    HR +  +      
Sbjct: 112 SSAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIP----D 167

Query: 298 DAATGPLCDVCKERRGLVFCVEDRAILCADC 390
               G +C   ++ +  ++CV D  ++CA C
Sbjct: 168 SHIRGLMCLEHEDEKVNMYCVTDDQLICALC 198



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>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42|
          Length = 723

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
 Frame = +1

Query: 178 VLCCADEAALCSPCNRRVHRA-NKLAGKHRRLTLLQ---LDAAGDAATGP-LCDVCKERR 342
           ++C     + C P + ++H   N L G+  +  + Q   L    D ++GP LC VC+ RR
Sbjct: 186 LICPMCSRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQVCRTRR 245

Query: 343 -GLVFCVEDRAILCADCDEPIHS 408
                CV  R  LC DC +  HS
Sbjct: 246 IAYKRCVTCRLNLCNDCLKAFHS 268



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>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
 Frame = +1

Query: 178 VLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAG------DAATGP-LCDVCKE 336
           ++C   + + C P + ++         H RLT   +   G      D ++GP LC VC+ 
Sbjct: 186 LICPVCDRSHCMPYSNKMQLPENYL--HGRLTKRYMQEHGYLKWRFDRSSGPILCQVCRN 243

Query: 337 RR-GLVFCVEDRAILCADCDEPIHS 408
           RR     C+  R  LC DC +  HS
Sbjct: 244 RRIAYKRCITCRLNLCNDCLKAFHS 268



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>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)|
           (Midin)
          Length = 680

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = +1

Query: 127 SIAMRVQCDVCGLEPA---AVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAG 297
           S A +V C  C  +PA      C   E + C  C +  H   K    HR +  +      
Sbjct: 112 SSAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIP----D 167

Query: 298 DAATGPLCDVCKERRGLVFCVEDRAILCADC 390
               G +C   ++ +  ++CV D  ++CA C
Sbjct: 168 SHIRGLMCLEHEDEKVNMYCVTDDQLICALC 198



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>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)|
           (Midin-2) (RING finger protein 60)
          Length = 715

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
 Frame = +1

Query: 139 RVQCDVCGLEP---AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAAT 309
           R+ C  C  +P   A   C   E + C  C R  H   K    HR    L          
Sbjct: 116 RIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHR----LVEPVPDTHLR 171

Query: 310 GPLCDVCKERRGLVFCVEDRAILCADC-------DEPIHSAND 417
           G  C   +  +  ++CV D  ++CA C       D  + S ND
Sbjct: 172 GITCLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLND 214



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>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)|
           (Putative transcription factor XPRF) (Midin) (RING
           finger protein 59) (Midline 1 RING finger protein)
          Length = 667

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
 Frame = +1

Query: 133 AMRVQCDVCGLEPA---AVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDA 303
           A +V C  C  +PA      C   E + C  C +  H   K    HR +  +        
Sbjct: 114 AEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIP----DSH 169

Query: 304 ATGPLCDVCKERRGLVFCVEDRAILCADC 390
             G +C   ++ +  ++CV D  ++CA C
Sbjct: 170 IRGLMCLEHEDEKVNMYCVTDDQLICALC 198



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>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch|
           protein 5)
          Length = 493

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = +1

Query: 187 CADEAALCSPCNRRV-HRANKLAGKHRRLTLLQLDAAGDAATG-PLCDVCKERRGLV--F 354
           C D A   SP + R  H  N L  K     LL+ +A G   T      VC+  RG +  F
Sbjct: 60  CKDRA---SPADLRTNHTLNNLVEK-----LLREEAEGARWTSYRFSRVCRLHRGQLSLF 111

Query: 355 CVEDRAILCADCD-EPIHSAN 414
           C+ED+ +LC  C  +P H  +
Sbjct: 112 CLEDKELLCCSCQADPRHQGH 132



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>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23)
          Length = 574

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 142 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPL 168



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 319 CDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSR 438
           CD  +     V+C      LC+DC +  HS   L AKH R
Sbjct: 127 CDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTL-AKHRR 165



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>IE68_HHV11 (P04485) Immediate-early protein IE68|
          Length = 420

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
 Frame = +1

Query: 253 GKHRRLTLLQLDAAGDAATGPLCDV-CKERR--GLVFCVEDRAI-LCADCDEPIHSANDL 420
           G H R T+ +++A  DA   P+C + C E R  G    + +  I L A  D+ I  A DL
Sbjct: 252 GMHLRNTIREVEARFDATAEPVCKLPCLETRRYGPECDLSNLEIHLSATSDDEISDATDL 311

Query: 421 TAKHSRFLLVGAKLSAD---PVDQEIPSP 498
            A  S   L     + D   PV  E P P
Sbjct: 312 EAAGSDHTLASQSDTEDAPSPVTLETPEP 340



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>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (Fragment)
          Length = 554

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 142 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 148



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>TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (EC 2.4.2.18)|
          Length = 335

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 162 AAHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKEVEGNNARRTG 25
           A  V +  HG+RSA S+CG     EE  +R+D   E       RTG
Sbjct: 91  ACGVRVAKHGNRSASSACGSADVLEELGVRIDLGAEEAAACLDRTG 136



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>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (RING finger
           protein 46)
          Length = 574

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 142 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 276
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 168



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>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting|
           protein) (RING finger protein 90)
          Length = 511

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
 Frame = +1

Query: 85  LFSSFDLPA----RRASRSIAMRVQCDVCGL--EPAAVLCCADEAALCSPCNRRVHRANK 246
           L   F LPA       S++ A R     CG   EP  + C  D  A+C  C+R       
Sbjct: 102 LLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDR------- 154

Query: 247 LAGKHRRLTLLQLDAA 294
            A +HR   +L LD A
Sbjct: 155 -AREHREHAVLPLDEA 169



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>TRI45_HUMAN (Q9H8W5) Tripartite motif protein 45 (RING finger protein 99)|
          Length = 580

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 6/101 (5%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD+C        C   +A LC  C +  HR  K    H  + L  L          LC V
Sbjct: 135 CDLCNDREVEKRCQTCKANLCHFCCQ-AHRRQKKTTYHTMVDLKDLKGYSRIGKPILCPV 193

Query: 328 CKERRGLVFCVEDRAILCADC------DEPIHSANDLTAKH 432
                  +FC      +C DC      + P    +++  KH
Sbjct: 194 HPAEELRLFCEFCDRPVCQDCVVGEHREHPCDFTSNVIHKH 234



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>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 476

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 23/60 (38%), Positives = 25/60 (41%)
 Frame = -3

Query: 180 HGGRLEAAHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKEVEGNNARRTGKQAKQREE 1
           HG     AH   HTHGDR   SS  +    EEK +    RK   GN   R G    Q  E
Sbjct: 256 HGHGDRHAHGDSHTHGDRHECSSKEKPSTEEEKEVG-GLRKRRGGNTGPRDGPVKPQSPE 314



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>TRI36_MOUSE (Q80WG7) Tripartite motif protein 36 (Haprin) (Acrosome RBCC|
           protein)
          Length = 729

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +1

Query: 208 CSPCNRRVHRANK-LAGKHRRLTLLQL----DAAGDAATGPLCDVCK--ERRGLVFCVED 366
           C  C   V    + ++G  R  TL  +      A  AAT  +CD+CK   +     C++ 
Sbjct: 115 CPGCEHDVDLGERGVSGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDC 174

Query: 367 RAILCADCDEPIHSANDLTAKH 432
            A  C +C +  H    + A+H
Sbjct: 175 SASYCNECFKIYHPWGTVKAQH 196



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>EGF_MOUSE (P01132) Pro-epidermal growth factor precursor (EGF) [Contains:|
           Epidermal growth factor]
          Length = 1217

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = +1

Query: 316 LCDVCKERRGLVFCVEDRAILCADCDEPIHSANDLTAKHSRFLLVGAK----LSADPVDQ 483
           +C+V ++  GL     D  +L  D    + +  D+T K+SR LL   K    ++ DP+++
Sbjct: 118 VCNVERKVSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLSSLKHPSNIAVDPIER 177



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>YHJ2_YEAST (P38767) Hypothetical 64.2 kDa protein in SLT2-PUT2 intergenic|
           region
          Length = 581

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 495 GGDLLVHGVGGELGPDEEE 439
           GGD+  HG G  +GPDEEE
Sbjct: 120 GGDIESHGHGQAIGPDEEE 138



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>TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45|
          Length = 580

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 24/101 (23%), Positives = 34/101 (33%), Gaps = 6/101 (5%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 327
           CD+C        C   +A LC  C  + HR  K    H  + L  L          LC  
Sbjct: 135 CDLCSDREVEKRCQTCKANLCHFC-CQAHRRQKKTTYHTMVDLKDLKGYSQVGKPILCPS 193

Query: 328 CKERRGLVFCVEDRAILCADC------DEPIHSANDLTAKH 432
                  +FC      +C DC      + P    +++  KH
Sbjct: 194 HPAEELRLFCELCDRPVCRDCVVGEHREHPYDFTSNVIHKH 234



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>YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in chromosome II|
          Length = 250

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = +1

Query: 148 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLL---QLDAAGDAATGPL 318
           CD      A+  C   +A LC  C   +H  + LA   +++      Q       +   +
Sbjct: 106 CDENTNHHASNYCETCDADLCEECWTWIHSISTLAHHEKKMISTPDCQFHPGKSISLVCM 165

Query: 319 CDVCKERRGLVFCVEDRAILCADCDEPIHSA 411
            D CK+R+  + C E     C+D  E  HS+
Sbjct: 166 RDRCKKRQNRLMCSECFLDKCSDHFEHEHSS 196



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>Y855_TREPA (O83827) Hypothetical protein TP0855 precursor|
          Length = 1127

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 159 AHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKE 55
           AH+A H H   SA +   Q     E+ALR DA+ E
Sbjct: 628 AHMAFHQHSGVSALAEYAQQLTSAEEALRFDAKDE 662



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>PRDX3_BOVIN (P35705) Thioredoxin-dependent peroxide reductase, mitochondrial|
           precursor (EC 1.11.1.15) (Peroxiredoxin-3) (Antioxidant
           protein 1) (AOP-1) (SP-22 protein)
          Length = 257

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 488 ISWSTGSAESLAPTRRKRLCLAVRSLALWMGSSQS 384
           I W   ++ +L P   +R+CL   + ALW GS Q+
Sbjct: 20  IPWGISASAALRPAASRRMCL---TNALWSGSDQA 51



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>TRI36_HUMAN (Q9NQ86) Tripartite motif protein 36 (Zinc-binding protein Rbcc728)|
           (RING finger protein 98)
          Length = 728

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
 Frame = +1

Query: 208 CSPCNRRVHRANK-LAGKHRRLTLLQL----DAAGDAATGPLCDVCK--ERRGLVFCVED 366
           C  C   V    + + G  R  TL  +      A  AAT  +CD+CK   +     C++ 
Sbjct: 115 CPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDC 174

Query: 367 RAILCADCDEPIHSANDLTAKH 432
            A  C +C +  H    + A+H
Sbjct: 175 SASYCNECFKIHHPWGTIKAQH 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,588,682
Number of Sequences: 219361
Number of extensions: 738462
Number of successful extensions: 3251
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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