ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38g10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 300 cgccgccaccgggccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgt 359 ||||||| ||| |||||| |||||||| |||| ||||| |||||| |||||||||||||| Sbjct: 29680558 cgccgccgccgcgccgctgtgcgacgtgtgcagggagaagaggggcctcgtgttctgcgt 29680617 Query: 360 ggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccacagcgccaacgacct 419 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 29680618 cgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccactccgccaacgacct 29680677 Query: 420 cacggccaagcacagccgcttcctcctcgtcggggccaagctctcc 465 ||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 29680678 caccgccaagcacacccgcttcctcctcgtcggcgccaagctctcc 29680723 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 133 gccatgcgtgtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgcc 192 |||||||| |||||||||||||| |||| | |||||||||||| ||||||||||||||| Sbjct: 29680379 gccatgcgggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgcc 29680438 Query: 193 gacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgcc 252 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 29680439 gacgaggccgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgcc 29680498 Query: 253 ggcaagcaccgccgcctc 270 ||||||||||||||||| Sbjct: 29680499 agcaagcaccgccgcctc 29680516 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 2694588 gtgctgtgctgcgccgacgaggcagcgctctgc 2694620 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 2694647 cgccaacaagctcgccgggaagcacc 2694672
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 300 cgccgccaccgggccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgt 359 ||||||| ||| |||||| |||||||| |||| ||||| |||||| |||||||||||||| Sbjct: 53672 cgccgccgccgcgccgctgtgcgacgtgtgcagggagaagaggggcctcgtgttctgcgt 53731 Query: 360 ggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccacagcgccaacgacct 419 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53732 cgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccactccgccaacgacct 53791 Query: 420 cacggccaagcacagccgcttcctcctcgtcggggccaagctctcc 465 ||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 53792 caccgccaagcacacccgcttcctcctcgtcggcgccaagctctcc 53837 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 133 gccatgcgtgtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgcc 192 |||||||| |||||||||||||| |||| | |||||||||||| ||||||||||||||| Sbjct: 53493 gccatgcgggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgcc 53552 Query: 193 gacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgcc 252 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 53553 gacgaggccgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgcc 53612 Query: 253 ggcaagcaccgccgcctc 270 ||||||||||||||||| Sbjct: 53613 agcaagcaccgccgcctc 53630
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 300 cgccgccaccgggccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgt 359 ||||||| ||| |||||| |||||||| |||| ||||| |||||| |||||||||||||| Sbjct: 124143 cgccgccgccgcgccgctgtgcgacgtgtgcagggagaagaggggcctcgtgttctgcgt 124202 Query: 360 ggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccacagcgccaacgacct 419 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124203 cgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccactccgccaacgacct 124262 Query: 420 cacggccaagcacagccgcttcctcctcgtcggggccaagctctcc 465 ||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 124263 caccgccaagcacacccgcttcctcctcgtcggcgccaagctctcc 124308 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 133 gccatgcgtgtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgcc 192 |||||||| |||||||||||||| |||| | |||||||||||| ||||||||||||||| Sbjct: 123964 gccatgcgggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgcc 124023 Query: 193 gacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgcc 252 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 124024 gacgaggccgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgcc 124083 Query: 253 ggcaagcaccgccgcctc 270 ||||||||||||||||| Sbjct: 124084 agcaagcaccgccgcctc 124101
>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full insert sequence Length = 1380 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 300 cgccgccaccgggccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgt 359 ||||||| ||| |||||| |||||||| |||| ||||| |||||| |||||||||||||| Sbjct: 357 cgccgccgccgcgccgctgtgcgacgtgtgcagggagaagaggggcctcgtgttctgcgt 416 Query: 360 ggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccacagcgccaacgacct 419 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 417 cgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccactccgccaacgacct 476 Query: 420 cacggccaagcacagccgcttcctcctcgtcggggccaagctctcc 465 ||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 477 caccgccaagcacacccgcttcctcctcgtcggcgccaagctctcc 522 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 133 gccatgcgtgtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgcc 192 |||||||| |||||||||||||| |||| | |||||||||||| ||||||||||||||| Sbjct: 178 gccatgcgggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgcc 237 Query: 193 gacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgcc 252 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 238 gacgaggccgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgcc 297 Query: 253 ggcaagcaccgccgcctc 270 ||||||||||||||||| Sbjct: 298 agcaagcaccgccgcctc 315
>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1479 Length = 1223 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 300 cgccgccaccgggccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgt 359 ||||||| ||| |||||| |||||||| |||| ||||| |||||| |||||||||||||| Sbjct: 200 cgccgccgccgcgccgctgtgcgacgtgtgcagggagaagaggggcctcgtgttctgcgt 259 Query: 360 ggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccacagcgccaacgacct 419 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 260 cgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccactccgccaacgacct 319 Query: 420 cacggccaagcacagccgcttcctcctcgtcggggccaagctctcc 465 ||| |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 320 caccgccaagcacacccgcttcctcctcgtcggcgccaagctctcc 365 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 133 gccatgcgtgtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgcc 192 |||||||| |||||||||||||| |||| | |||||||||||| ||||||||||||||| Sbjct: 21 gccatgcgggtgcagtgcgacgtctgcgccgccgagccggccgcggtgctctgctgcgcc 80 Query: 193 gacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgcc 252 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 81 gacgaggccgcgctctgctccgcctgcgaccgccgcgtccaccgcgccaaccgcctcgcc 140 Query: 253 ggcaagcaccgccgcctc 270 ||||||||||||||||| Sbjct: 141 agcaagcaccgccgcctc 158
>ref|XM_473353.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 182 tctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcca 241 ||||||||||||||||||||||||| ||| | | ||| |||||||||||||| |||| | Sbjct: 47 tctgctgcgccgacgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcga 106 Query: 242 acaagctcgccggcaagcaccgccgcctcaccctcctcca 281 ||||||||||||| ||||||||||| || |||||||||| Sbjct: 107 acaagctcgccgggaagcaccgccgattctccctcctcca 146 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 313 ccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggcg 372 |||||||||||| |||| |||||| ||||||| || |||||||| ||||||| ||||| Sbjct: 181 ccgctctgcgacatctgtcaggagaagagggggttcttgttctgcaaggaggacagggcg 240 Query: 373 atcctgtgc 381 ||||||||| Sbjct: 241 atcctgtgc 249
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 182 tctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcca 241 ||||||||||||||||||||||||| ||| | | ||| |||||||||||||| |||| | Sbjct: 68641 tctgctgcgccgacgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcga 68700 Query: 242 acaagctcgccggcaagcaccgccgcctcaccctcctcca 281 ||||||||||||| ||||||||||| || |||||||||| Sbjct: 68701 acaagctcgccgggaagcaccgccgattctccctcctcca 68740 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 332 aggagaggagggggctcgtgttctgcgtggaggaccgggcgatcctgtgc 381 |||||| ||||||| || |||||||| ||||||| |||||||||||||| Sbjct: 68887 aggagaagagggggttcttgttctgcaaggaggacagggcgatcctgtgc 68936
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 182 tctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcca 241 ||||||||||||||||||||||||| ||| | | ||| |||||||||||||| |||| | Sbjct: 27000940 tctgctgcgccgacgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcga 27000999 Query: 242 acaagctcgccggcaagcaccgccgcctcaccctcctcca 281 ||||||||||||| ||||||||||| || |||||||||| Sbjct: 27001000 acaagctcgccgggaagcaccgccgattctccctcctcca 27001039 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 332 aggagaggagggggctcgtgttctgcgtggaggaccgggcgatcctgtgc 381 |||||| ||||||| || |||||||| ||||||| |||||||||||||| Sbjct: 27001186 aggagaagagggggttcttgttctgcaaggaggacagggcgatcctgtgc 27001235 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||| ||||| || | ||| ||||||||||||||||||||| Sbjct: 24624116 ttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccac 24624063 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 24624348 cgccaacaagctcgccagcaagcacc 24624323 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccggcaagcaccgccgcc 268 |||||||||||||||||||| Sbjct: 22119798 cgccggcaagcaccgccgcc 22119779
>dbj|AK061333.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A11, full insert sequence Length = 1220 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 182 tctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcca 241 ||||||||||||||||||||||||| ||| | | ||| |||||||||||||| |||| | Sbjct: 244 tctgctgcgccgacgaggccgcgctgtgcgacgcgtgcgaccgccgcgtccacagcgcga 303 Query: 242 acaagctcgccggcaagcaccgccgcctcaccctcctcca 281 ||||||||||||| ||||||||||| || |||||||||| Sbjct: 304 acaagctcgccgggaagcaccgccgattctccctcctcca 343 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 313 ccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggcg 372 |||||||||||| |||| |||||| ||||||| || |||||||| ||||||| ||||| Sbjct: 378 ccgctctgcgacatctgtcaggagaagagggggttcttgttctgcaaggaggacagggcg 437 Query: 373 atcctgtgc 381 ||||||||| Sbjct: 438 atcctgtgc 446
>ref|XM_467034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 142 gtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgccgacgaggcc 201 ||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||| Sbjct: 178 gtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgacgaggcc 237 Query: 202 gcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgccggcaagcac 261 ||||| ||| | | ||| ||| ||| || ||||| ||||||||||||||||| |||||| Sbjct: 238 gcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccgggaagcac 297 Query: 262 cgccg 266 ||||| Sbjct: 298 cgccg 302 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 312 gccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggc 371 ||||||||||||| ||||| |||||| |||||| || |||||||| |||||||||||| Sbjct: 357 gccgctctgcgacatctgccaggagaagaggggtttcctgttctgcaaggaggaccgggc 416 Query: 372 gatcctgtgcgccgactgcgacg 394 |||||||||| ||| ||||||| Sbjct: 417 gatcctgtgccgcgagtgcgacg 439
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 142 gtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgccgacgaggcc 201 ||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||| Sbjct: 26046454 gtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgacgaggcc 26046513 Query: 202 gcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgccggcaagcac 261 ||||| ||| | | ||| ||| ||| || ||||| ||||||||||||||||| |||||| Sbjct: 26046514 gcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccgggaagcac 26046573 Query: 262 cgccg 266 ||||| Sbjct: 26046574 cgccg 26046578 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 23778970 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 23779023 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 332 aggagaggagggggctcgtgttctgcgtggaggaccgggcgatcctgtgcgccgactgcg 391 |||||| |||||| || |||||||| |||||||||||||||||||||| ||| |||| Sbjct: 26046752 aggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgcg 26046811 Query: 392 acg 394 ||| Sbjct: 26046812 acg 26046814
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 142 gtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgccgacgaggcc 201 ||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||| Sbjct: 53900 gtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgacgaggcc 53959 Query: 202 gcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgccggcaagcac 261 ||||| ||| | | ||| ||| ||| || ||||| ||||||||||||||||| |||||| Sbjct: 53960 gcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccgggaagcac 54019 Query: 262 cgccg 266 ||||| Sbjct: 54020 cgccg 54024 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 332 aggagaggagggggctcgtgttctgcgtggaggaccgggcgatcctgtgcgccgactgcg 391 |||||| |||||| || |||||||| |||||||||||||||||||||| ||| |||| Sbjct: 54198 aggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgcg 54257 Query: 392 acg 394 ||| Sbjct: 54258 acg 54260
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 142 gtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgccgacgaggcc 201 ||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||| Sbjct: 110327 gtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgacgaggcc 110386 Query: 202 gcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgccggcaagcac 261 ||||| ||| | | ||| ||| ||| || ||||| ||||||||||||||||| |||||| Sbjct: 110387 gcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccgggaagcac 110446 Query: 262 cgccg 266 ||||| Sbjct: 110447 cgccg 110451 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 332 aggagaggagggggctcgtgttctgcgtggaggaccgggcgatcctgtgcgccgactgcg 391 |||||| |||||| || |||||||| |||||||||||||||||||||| ||| |||| Sbjct: 110625 aggagaagaggggtttcctgttctgcaaggaggaccgggcgatcctgtgccgcgagtgcg 110684 Query: 392 acg 394 ||| Sbjct: 110685 acg 110687
>dbj|AK071507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D24, full insert sequence Length = 1200 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 142 gtgcagtgcgacgtgtgcggcctcgagccggccgccgtgctctgctgcgccgacgaggcc 201 ||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||| Sbjct: 178 gtgcagtgcgacgtgtgcgcggccgaggcggcgtcggtgttctgctgcgccgacgaggcc 237 Query: 202 gcgctctgctccccctgcaaccgccgcgtccaccgcgccaacaagctcgccggcaagcac 261 ||||| ||| | | ||| ||| ||| || ||||| ||||||||||||||||| |||||| Sbjct: 238 gcgctgtgcgacgcgtgcgaccaccgggtgcaccgggccaacaagctcgccgggaagcac 297 Query: 262 cgccg 266 ||||| Sbjct: 298 cgccg 302 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 312 gccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggc 371 ||||||||||||| ||||| |||||| |||||| || |||||||| |||||||||||| Sbjct: 357 gccgctctgcgacatctgccaggagaagaggggtttcctgttctgcaaggaggaccgggc 416 Query: 372 gatcctgtgcgccgactgcgacg 394 |||||||||| ||| ||||||| Sbjct: 417 gatcctgtgccgcgagtgcgacg 439
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 83.8 bits (42), Expect = 5e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgc 237 |||||||||||||||||||| ||||| |||||| | | |||| ||| || ||||||| | Sbjct: 43 gtgctctgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgcc 102 Query: 238 gccaacaagctcgccggcaagcaccgccgcctcaccctcctc 279 |||||| |||||||||||||||| ||||||| |||||||| Sbjct: 103 gccaaccgcctcgccggcaagcaccaccgcctccccctcctc 144
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 5e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgc 237 |||||||||||||||||||| ||||| |||||| | | |||| ||| || ||||||| | Sbjct: 5638869 gtgctctgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgcc 5638928 Query: 238 gccaacaagctcgccggcaagcaccgccgcctcaccctcctc 279 |||||| |||||||||||||||| ||||||| |||||||| Sbjct: 5638929 gccaaccgcctcgccggcaagcaccaccgcctccccctcctc 5638970 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 37689499 ccggcaagcaccgccgccccaccc 37689522 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 36724109 ccggcaagcaccgccgccccaccc 36724132 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tgctctgctgcgccgacgaggccg 202 |||||| ||||||||||||||||| Sbjct: 9277516 tgctctactgcgccgacgaggccg 9277493
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 83.8 bits (42), Expect = 5e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgc 237 |||||||||||||||||||| ||||| |||||| | | |||| ||| || ||||||| | Sbjct: 104342 gtgctctgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgcc 104401 Query: 238 gccaacaagctcgccggcaagcaccgccgcctcaccctcctc 279 |||||| |||||||||||||||| ||||||| |||||||| Sbjct: 104402 gccaaccgcctcgccggcaagcaccaccgcctccccctcctc 104443
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 5e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccg-cgtccaccg 236 ||||| ||||||||||||||||||||||||||| || |||| | ||||| ||||||| Sbjct: 5698894 gtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactc 5698952 Query: 237 cgccaacaagctcgccggcaagcac 261 |||||||| |||||||||||||||| Sbjct: 5698953 cgccaacaggctcgccggcaagcac 5698977
>dbj|AK067820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117D12, full insert sequence Length = 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccg-cgtccaccg 236 ||||| ||||||||||||||||||||||||||| || |||| | ||||| ||||||| Sbjct: 107 gtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactc 165 Query: 237 cgccaacaagctcgccggcaagcac 261 |||||||| |||||||||||||||| Sbjct: 166 cgccaacaggctcgccggcaagcac 190
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 5e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccg-cgtccaccg 236 ||||| ||||||||||||||||||||||||||| || |||| | ||||| ||||||| Sbjct: 5698887 gtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactc 5698945 Query: 237 cgccaacaagctcgccggcaagcac 261 |||||||| |||||||||||||||| Sbjct: 5698946 cgccaacaggctcgccggcaagcac 5698970
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 73.8 bits (37), Expect = 5e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccg-cgtccaccg 236 ||||| ||||||||||||||||||||||||||| || |||| | ||||| ||||||| Sbjct: 53417 gtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcga-cgccgccgtccactc 53475 Query: 237 cgccaacaagctcgccggcaagcac 261 |||||||| |||||||||||||||| Sbjct: 53476 cgccaacaggctcgccggcaagcac 53500
>ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 326 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 379
>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25 mRNA Length = 1078 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 326 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 379
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA sequence Length = 1225 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 |||||||| |||||||||||| || | ||| |||||||||||||||||||||| Sbjct: 278 ttctgcgtcgaggaccgggcgctcttctgccgcgactgcgacgagcccatccac 331
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 636 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 689
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 89554 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 89607
>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full insert sequence Length = 1065 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 326 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 379
>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full insert sequence Length = 1078 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 326 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 379
>gb|AY109441.1| Zea mays CL359_1 mRNA sequence Length = 1551 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||||||| || | ||| ||||||||||||||||||||| Sbjct: 295 ttctgcgtggaggaccgggcgctcttctgccgggactgcgacgagcccatccac 348 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 184 tgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcg-tccaccgcgccaa 242 ||||||||||||||||||||||| ||| | | |||| | || || | ||||| |||||| Sbjct: 142 tgctgcgccgacgaggccgcgctgtgcgcgcgctgcga-cgtcgagatccacgccgccaa 200 Query: 243 caagctcgccggcaagcacc 262 |||||||||| ||||||||| Sbjct: 201 caagctcgccagcaagcacc 220
>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1577 Length = 1197 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||||| ||| || | ||| |||||||||||||||||||||| Sbjct: 321 ttctgcgtggaggaccgcgcgctcttctgccgcgactgcgacgagcccatccac 374
>ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 313 ccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggcg 372 |||| ||||||||||||| |||||| | || | || | ||||||||||||||| ||||| Sbjct: 166 ccgcgctgcgacgtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcg 225 Query: 373 atcctgtgcgccgactgcgacgagcccatccac 405 || | ||| ||||||||||||||||||||| Sbjct: 226 ctcttctgccgggactgcgacgagcccatccac 258 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 102 cgccaacaagctcgccagcaagcacc 127
>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:E10707 Length = 987 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 313 ccgctctgcgacgtctgcaaggagaggagggggctcgtgttctgcgtggaggaccgggcg 372 |||| ||||||||||||| |||||| | || | || | ||||||||||||||| ||||| Sbjct: 188 ccgcgctgcgacgtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcg 247 Query: 373 atcctgtgcgccgactgcgacgagcccatccac 405 || | ||| ||||||||||||||||||||| Sbjct: 248 ctcttctgccgggactgcgacgagcccatccac 280 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 124 cgccaacaagctcgccagcaagcacc 149
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 181 ctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcc 240 ||||||||||||||||||||||| || ||| | | |||| ||||| | ||||| |||| Sbjct: 134849 ctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgcc 134908 Query: 241 aacaagctcgccggcaagcaccgccgcctcaccctcctc 279 ||| |||||||| ||||||| ||||||| | |||||| Sbjct: 134909 aaccgcctcgccgggaagcacctccgcctccctctcctc 134947
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 181 ctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcc 240 ||||||||||||||||||||||| || ||| | | |||| ||||| | ||||| |||| Sbjct: 6433110 ctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgcc 6433169 Query: 241 aacaagctcgccggcaagcaccgccgcctcaccctcctc 279 ||| |||||||| ||||||| ||||||| | |||||| Sbjct: 6433170 aaccgcctcgccgggaagcacctccgcctccctctcctc 6433208
>dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C11, full insert sequence Length = 2055 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 181 ctctgctgcgccgacgaggccgcgctctgctccccctgcaaccgccgcgtccaccgcgcc 240 ||||||||||||||||||||||| || ||| | | |||| ||||| | ||||| |||| Sbjct: 278 ctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgcc 337 Query: 241 aacaagctcgccggcaagcaccgccgcctcaccctcctc 279 ||| |||||||| ||||||| ||||||| | |||||| Sbjct: 338 aaccgcctcgccgggaagcacctccgcctccctctcctc 376
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||| ||||| || | ||| ||||||||||||||||||||| Sbjct: 79261 ttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccac 79208 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 79493 cgccaacaagctcgccagcaagcacc 79468
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||| ||||| || | ||| ||||||||||||||||||||| Sbjct: 62907 ttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccac 62854 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 63142 cgccaacaagctcgccagcaagcacc 63117
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 352 ttctgcgtggaggaccgggcgatcctgtgcgccgactgcgacgagcccatccac 405 ||||||||||||||| ||||| || | ||| ||||||||||||||||||||| Sbjct: 13639 ttctgcgtggaggacagggcgctcttctgccgggactgcgacgagcccatccac 13586 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||| ||||||||| Sbjct: 13871 cgccaacaagctcgccagcaagcacc 13846
>ref|XM_550653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1339 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 105 gtgctgtgctgcgccgacgaggcagcgctctgc 137 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 164 cgccaacaagctcgccgggaagcacc 189
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 149929 gtgctgtgctgcgccgacgaggcagcgctctgc 149961 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 149988 cgccaacaagctcgccgggaagcacc 150013
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 106335 gtgctgtgctgcgccgacgaggcagcgctctgc 106367 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 106394 cgccaacaagctcgccgggaagcacc 106419
>dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D01, full insert sequence Length = 1339 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 105 gtgctgtgctgcgccgacgaggcagcgctctgc 137 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 164 cgccaacaagctcgccgggaagcacc 189
>dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E21, full insert sequence Length = 1450 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 138 gtgctgtgctgcgccgacgaggcagcgctctgc 170 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 197 cgccaacaagctcgccgggaagcacc 222
>dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R2931 Length = 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 gtgctctgctgcgccgacgaggccgcgctctgc 210 ||||| ||||||||||||||||| ||||||||| Sbjct: 113 gtgctgtgctgcgccgacgaggcagcgctctgc 145 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cgccaacaagctcgccggcaagcacc 262 |||||||||||||||||| ||||||| Sbjct: 172 cgccaacaagctcgccgggaagcacc 197
>gb|AC117228.2| Mus musculus BAC clone RP23-380J24 from chromosome 2, complete sequence Length = 179980 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 ctttgcttgctttcctgttcttc 35 ||||||||||||||||||||||| Sbjct: 103159 ctttgcttgctttcctgttcttc 103137
>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part of a novel gene, complete sequence Length = 173828 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 gctttctcttctcctcctttgac 102 ||||||||||||||||||||||| Sbjct: 33275 gctttctcttctcctcctttgac 33297
>emb|BX546441.10| Mouse DNA sequence from clone RP23-366I14 on chromosome 2, complete sequence Length = 114325 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 13 ctttgcttgctttcctgttcttc 35 ||||||||||||||||||||||| Sbjct: 90331 ctttgcttgctttcctgttcttc 90353
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 1207 tgcgccgacgaggccgcgctgtgcgccccc 1236
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 35256087 tgcgccgacgaggccgcgctgtgcgccccc 35256058 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgccgacgaggccgcgctc 207 |||||||||||||||||||| Sbjct: 33921118 gcgccgacgaggccgcgctc 33921099
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 134848 tgcgccgacgaggccgcgctgtgcgccccc 134819
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 35346159 tgcgccgacgaggccgcgctgtgcgccccc 35346130 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgccgacgaggccgcgctc 207 |||||||||||||||||||| Sbjct: 34011590 gcgccgacgaggccgcgctc 34011571
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 112367 tgcgccgacgaggccgcgctgtgcgccccc 112396
>dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H05, full insert sequence Length = 1631 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 tgcgccgacgaggccgcgctctgctccccc 216 |||||||||||||||||||| ||| ||||| Sbjct: 1207 tgcgccgacgaggccgcgctgtgcgccccc 1236
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ccctgcaaccgccgcgtccacc 235 |||||||||||||||||||||| Sbjct: 948273 ccctgcaaccgccgcgtccacc 948252
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tgtgcgccgactgcgacgagc 397 ||||||||||||||||||||| Sbjct: 97145 tgtgcgccgactgcgacgagc 97125
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 ccgtgctctgctgcgccgacg 196 ||||||||||||||||||||| Sbjct: 398073 ccgtgctctgctgcgccgacg 398093
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 tcgccggcaagcaccgccgcc 268 ||||||||||||||||||||| Sbjct: 2874830 tcgccggcaagcaccgccgcc 2874810
>ref|NM_137318.2| Drosophila melanogaster CG5859-RA (CG5859), mRNA Length = 3269 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 1575 gatgctgcaggcgacgccgcc 1595
>gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53F-54X, BAC clone BACR09M08, complete sequence Length = 179283 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 1389 gatgctgcaggcgacgccgcc 1409
>gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53E-54X, BAC clone BACR03E17, complete sequence Length = 160338 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 106038 gatgctgcaggcgacgccgcc 106058
>gb|AY058406.1| Drosophila melanogaster GH18129 full length cDNA Length = 3298 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 1575 gatgctgcaggcgacgccgcc 1595
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 gccgacgaggccgcgctctgc 210 ||||||||||||||||||||| Sbjct: 20348281 gccgacgaggccgcgctctgc 20348261
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 ctcgagccggccgccgtgctc 183 ||||||||||||||||||||| Sbjct: 2373695 ctcgagccggccgccgtgctc 2373715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 accgccgcgtccaccgcgcc 240 |||||||||||||||||||| Sbjct: 4565269 accgccgcgtccaccgcgcc 4565288 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gctgcgccgacgaggccgcg 204 |||||||||||||||||||| Sbjct: 1809160 gctgcgccgacgaggccgcg 1809141
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 gccgacgaggccgcgctctgc 210 ||||||||||||||||||||| Sbjct: 127408 gccgacgaggccgcgctctgc 127388
>dbj|AK122172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148H23, full insert sequence Length = 1249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 gccgacgaggccgcgctctgc 210 ||||||||||||||||||||| Sbjct: 312 gccgacgaggccgcgctctgc 332
>dbj|AK061664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E12, full insert sequence Length = 765 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 gactgcgacgagcccatccac 405 ||||||||||||||||||||| Sbjct: 19 gactgcgacgagcccatccac 39
>gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45 of 73 of the complete sequence Length = 272948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 119886 gatgctgcaggcgacgccgcc 119906
>gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, complete sequence Length = 212662 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 gcttgctttcctgttcttctt 37 ||||||||||||||||||||| Sbjct: 53441 gcttgctttcctgttcttctt 53461
>gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s DS07321 (D175), DS05993 (D241), and DS06306 (D173)), complete sequence Length = 154985 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 gatgctgcaggcgacgccgcc 306 ||||||||||||||||||||| Sbjct: 104408 gatgctgcaggcgacgccgcc 104388
>ref|NM_188036.1| Oryza sativa (japonica cultivar-group), Ozsa8456 predicted mRNA Length = 1593 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tgctctgctgcgccgacgaggccg 202 |||||| ||||||||||||||||| Sbjct: 380 tgctctactgcgccgacgaggccg 403
>ref|XM_470097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5247 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgccgacgaggccgcgctc 207 |||||||||||||||||||| Sbjct: 485 gcgccgacgaggccgcgctc 504
>ref|NM_190783.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 77 ccggcaagcaccgccgccccaccc 100
>ref|NM_185551.1| Oryza sativa (japonica cultivar-group), mRNA Length = 246 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgcctcaccctcctcca 281 |||||||||||||||||||| Sbjct: 162 cgccgcctcaccctcctcca 143
>ref|XM_472635.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccggcaagcaccgccgcc 268 |||||||||||||||||||| Sbjct: 322 cgccggcaagcaccgccgcc 303
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gtgcggcctcgagccggccg 175 |||||||||||||||||||| Sbjct: 2293636 gtgcggcctcgagccggccg 2293655
>ref|XM_588755.2| PREDICTED: Bos taurus similar to Collagen alpha 1(VI) chain precursor, transcript variant 1 (LOC511422), mRNA Length = 3936 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgcgctctgctccccctgc 219 |||||||||||||||||||| Sbjct: 105 ccgcgctctgctccccctgc 124
>ref|XM_871557.1| PREDICTED: Bos taurus similar to Collagen alpha 1(VI) chain precursor, transcript variant 2 (LOC511422), mRNA Length = 1145 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgcgctctgctccccctgc 219 |||||||||||||||||||| Sbjct: 105 ccgcgctctgctccccctgc 124
>ref|XM_451708.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B03916g predicted mRNA Length = 744 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctttcctgttcttcttgcat 41 |||||||||||||||||||| Sbjct: 710 ctttcctgttcttcttgcat 691
>emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AWN gene, AQN-1 gene, PSP-II gene, PSP-I gene, AQN-3 gene and C10ORF120 gene Length = 270148 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 46 tccctccacctccttcctcgcatccagccgca 77 ||||||| ||||||| |||| ||||||||||| Sbjct: 106309 tccctcctcctcctttctcgaatccagccgca 106278
>ref|XM_533033.2| PREDICTED: Canis familiaris similar to ankyrin repeat domain 35 (LOC475825), mRNA Length = 3233 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gctccccctgcaaccgccgc 228 |||||||||||||||||||| Sbjct: 1936 gctccccctgcaaccgccgc 1917
>emb|CR956364.13| Pig DNA sequence from clone PigI-52G3 on chromosome 7, complete sequence Length = 105198 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ttcttgcattatttccctccacct 56 |||||||||| ||||||||||||| Sbjct: 25813 ttcttgcattttttccctccacct 25790
>gb|AC121931.2| Mus musculus BAC clone RP24-205H14 from 2, complete sequence Length = 188664 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctttgctttgcttgctttcc 27 |||||||||||||||||||| Sbjct: 178745 ctttgctttgcttgctttcc 178764
>emb|AL158143.14| Human DNA sequence from clone RP5-1074I8 on chromosome X, complete sequence Length = 27063 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gtggaccaggagatcccctc 494 |||||||||||||||||||| Sbjct: 6367 gtggaccaggagatcccctc 6348
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctttcctgttcttcttgcat 41 |||||||||||||||||||| Sbjct: 357346 ctttcctgttcttcttgcat 357365
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccggcaagcaccgccgcc 268 |||||||||||||||||||| Sbjct: 18279 cgccggcaagcaccgccgcc 18260
>gb|AC087468.11| Homo sapiens chromosome 15, clone RP11-255M6, complete sequence Length = 168693 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 attatttccctccacctccttcct 63 ||||||||||||| |||||||||| Sbjct: 164038 attatttccctccccctccttcct 164061
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 agcaccgccgcctcaccctc 276 |||||||||||||||||||| Sbjct: 795488 agcaccgccgcctcaccctc 795469
>gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complete sequence Length = 198586 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 cccgtggaccaggagatcccctcc 495 |||||||| ||||||||||||||| Sbjct: 128985 cccgtggatcaggagatcccctcc 129008
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aggagaggagggggctcgtg 351 |||||||||||||||||||| Sbjct: 121540 aggagaggagggggctcgtg 121521
>gb|AC162390.6| Mus musculus 6 BAC RP23-233J7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229971 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tttgcttgctttcctgttcttctt 37 |||||||||||||||||| ||||| Sbjct: 19421 tttgcttgctttcctgtttttctt 19444
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgcctcaccctcctcca 281 |||||||||||||||||||| Sbjct: 29360050 cgccgcctcaccctcctcca 29360031
>gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, complete sequence Length = 147226 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcttctctttgctttgcttg 21 |||||||||||||||||||| Sbjct: 122578 tcttctctttgctttgcttg 122559
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgccgacgaggccgcgctc 207 |||||||||||||||||||| Sbjct: 136573 gcgccgacgaggccgcgctc 136592
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 149973 ccggcaagcaccgccgccccaccc 149996
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 50424 ccggcaagcaccgccgccccaccc 50447
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccggcaagcaccgccgcctcaccc 274 |||||||||||||||||| ||||| Sbjct: 17800 ccggcaagcaccgccgccccaccc 17823
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tgctctgctgcgccgacgaggccg 202 |||||| ||||||||||||||||| Sbjct: 54110 tgctctactgcgccgacgaggccg 54087
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgcctcaccctcctcca 281 |||||||||||||||||||| Sbjct: 148739 cgccgcctcaccctcctcca 148720
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cggcctcgagccggccgccgtgct 182 |||||||||||||| ||||||||| Sbjct: 2944015 cggcctcgagccggtcgccgtgct 2944038
>gb|AC158643.3| Mus musculus BAC RP23-477A19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193831 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tttgcttgctttcctgttcttctt 37 |||||||||||||||||| ||||| Sbjct: 172930 tttgcttgctttcctgtttttctt 172953
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctcttctctttgctttgctt 20 |||||||||||||||||||| Sbjct: 103079 ctcttctctttgctttgctt 103060
>gb|AC154823.2| Mus musculus BAC clone RP24-538J1 from 17, complete sequence Length = 187746 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tctttgctttgcttgctttc 26 |||||||||||||||||||| Sbjct: 28126 tctttgctttgcttgctttc 28107
>dbj|AK067610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112F12, full insert sequence Length = 2264 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tgctctgctgcgccgacgaggccg 202 |||||| ||||||||||||||||| Sbjct: 517 tgctctactgcgccgacgaggccg 540
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgcctcaccctcctcca 281 |||||||||||||||||||| Sbjct: 22972 cgccgcctcaccctcctcca 22953
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgccggcaagcaccgccgcc 268 |||||||||||||||||||| Sbjct: 44303 cgccggcaagcaccgccgcc 44284
>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete sequence Length = 230151 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctttgctttgcttgctttcc 27 |||||||||||||||||||| Sbjct: 6448 ctttgctttgcttgctttcc 6467
>gb|AC122387.3| Mus musculus BAC clone RP24-76F22 from 6, complete sequence Length = 191058 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tttgcttgctttcctgttct 33 |||||||||||||||||||| Sbjct: 101566 tttgcttgctttcctgttct 101547
>emb|AL603843.15| Mouse DNA sequence from clone RP23-412D17 on chromosome 15, complete sequence Length = 203649 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tctttgctttgcttgctttc 26 |||||||||||||||||||| Sbjct: 24754 tctttgctttgcttgctttc 24773 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,561,024 Number of Sequences: 3902068 Number of extensions: 4561024 Number of successful extensions: 112715 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110261 Number of HSP's gapped (non-prelim): 2436 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
