Clone Name | bart38g09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YDTB_SCHPO (O14216) Hypothetical protein C6B12.11 in chromosome I | 30 | 3.2 | 2 | HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expr... | 30 | 5.5 |
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>YDTB_SCHPO (O14216) Hypothetical protein C6B12.11 in chromosome I| Length = 337 Score = 30.4 bits (67), Expect = 3.2 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = -2 Query: 183 INTNTSSTKIGSGTAVPTPLLLLPRPISTHTMVVSSTMPL*WRW*GY*TIEYMRVRAPC 7 I NTS S T +PT P P++ HT V T P +R Y + +RV APC Sbjct: 139 IKHNTSEI---SSTMIPTTPSKNPEPVAQHTPTVLET-PSSYRLQVYTSPNLLRVNAPC 193
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 29.6 bits (65), Expect = 5.5 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 Query: 156 IGSGTAVPTPLLLLPRPISTHTMVVSS 76 +G G A PTP LP P S+ T +VSS Sbjct: 39 LGRGPAAPTPTPTLPSPNSSFTSLVSS 65 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,686,595 Number of Sequences: 219361 Number of extensions: 480548 Number of successful extensions: 1445 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1420 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1444 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)