ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38g01 |
|---|---|
| Clone Library Name | barley_pub |
>EXOS8_MOUSE (Q9D753) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 43) (Exosome component 8) Length = 276 Score = 135 bits (340), Expect = 9e-32 Identities = 62/147 (42%), Positives = 96/147 (65%) Frame = +2 Query: 149 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 328 ++ + PL + R L+E+ RPD R L E R TTV +G++S+A GSALV+LG+T ++ +K Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64 Query: 329 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKEL 508 E +PP + PD+G V +PP+CS R G P E A V S+ + DV+ +S ++ ++L Sbjct: 65 EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDL 124 Query: 509 CLISGKASWVAYLDVYCLNADGSLFDA 589 C+ GK +WV Y D+ CL+ DG++ DA Sbjct: 125 CISPGKLAWVLYCDLICLDYDGNILDA 151
>EXOS8_HUMAN (Q96B26) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 43) (Exosome component 8) (p9) (Opa-interacting protein 2) Length = 276 Score = 132 bits (331), Expect = 1e-30 Identities = 61/147 (41%), Positives = 94/147 (63%) Frame = +2 Query: 149 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 328 ++ + PL + R L+E+ RPD R L E R TTV +G++S+A GSALV+LG+T ++ +K Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64 Query: 329 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKEL 508 E +P + PD+G V +PP+CS R G P E A V S+ + DV+ +S ++ ++L Sbjct: 65 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124 Query: 509 CLISGKASWVAYLDVYCLNADGSLFDA 589 C+ GK WV Y D+ CL+ DG++ DA Sbjct: 125 CISPGKLVWVLYCDLICLDYDGNILDA 151
>RRP43_SCHPO (Q10205) Putative exosome complex exonuclease RRP43 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 43) Length = 270 Score = 119 bits (299), Expect = 5e-27 Identities = 53/148 (35%), Positives = 87/148 (58%) Frame = +2 Query: 149 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 328 ++++ P +L L + VR D R ++E R + +S+A+GSA++R G+ + IK Sbjct: 17 FKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKA 76 Query: 329 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKEL 508 E+ P +P++G + + P+CS +PG P++ A V+S+ L L S ++NL+ L Sbjct: 77 EIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSL 136 Query: 509 CLISGKASWVAYLDVYCLNADGSLFDAA 592 C+ KA+WV Y D+ CLN DGS FD A Sbjct: 137 CIFEKKAAWVLYADIICLNYDGSAFDYA 164
>ECX2_METKA (Q8TYC2) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 267 Score = 116 bits (290), Expect = 6e-26 Identities = 59/149 (39%), Positives = 94/149 (63%), Gaps = 5/149 (3%) Frame = +2 Query: 167 LAFLERH-----LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLE 331 LA ++RH +R R D R E RP V G +S A+GSALVRLG+T ++ +KLE Sbjct: 6 LARIKRHEVLAAIRAGERIDGRDFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLE 65 Query: 332 VMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELC 511 V P ++P++G++AV + P+ P PG P E A +S+ ++ + S M++L+ELC Sbjct: 66 VGRPYPDSPNEGALAVNAELVPLADPSFEPGPPDENAIELSRVVDRGIRESEMIDLEELC 125 Query: 512 LISGKASWVAYLDVYCLNADGSLFDAALI 598 + G+ WV ++D++ L+ DG+LFDA++I Sbjct: 126 IEEGEHCWVTFVDIHVLDHDGNLFDASMI 154
>ECX2_METTH (O26778) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 271 Score = 100 bits (248), Expect = 4e-21 Identities = 45/132 (34%), Positives = 81/132 (61%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R L E R ++ G +S A GS+ V+LG+T ++ +K ++ P +TP+ G + Sbjct: 25 RIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDTPEMGVILTN 84 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + P+ SP PG P E + +S+ ++ + S M++L++LC+I G W+ +LD++ + Sbjct: 85 SELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHII 144 Query: 563 NADGSLFDAALI 598 + DG+LFDAA++ Sbjct: 145 DYDGNLFDAAVL 156
>ECX2_SULTO (Q975G9) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 275 Score = 100 bits (248), Expect = 4e-21 Identities = 51/137 (37%), Positives = 80/137 (58%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 L +R D R+ ++ RP +V L A GSALV+LGDT +LA +KLE P +TP+QG Sbjct: 23 LERGIRLDGRKNSDYRPISVTLNYAKKAEGSALVKLGDTMVLAGVKLEEEEPFPDTPNQG 82 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 ++ V + P+ PG P E A +++ ++ L S ++L +L +I GK W A++ Sbjct: 83 NLVVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKAVDLSKLVIIPGKKVWTAWV 142 Query: 548 DVYCLNADGSLFDAALI 598 DVY L+ G++ DA + Sbjct: 143 DVYVLDYGGNVLDACTL 159
>ECX2_AERPE (Q9YC05) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 276 Score = 97.8 bits (242), Expect = 2e-20 Identities = 49/137 (35%), Positives = 81/137 (59%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 LR+ RP R L R + G + A GSALV+LG T ++A +K V +P +TP+QG Sbjct: 23 LRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQG 82 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + V P+ SP+ PG P E A +++ ++ L G ++L+ L + G+ WV ++ Sbjct: 83 VLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLREVGAVDLESLVIRPGEKVWVLWV 142 Query: 548 DVYCLNADGSLFDAALI 598 D+Y ++ DG+LFDA+++ Sbjct: 143 DLYIIDHDGNLFDASML 159
>ECX2_SULSO (Q9UXC0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 275 Score = 96.7 bits (239), Expect = 5e-20 Identities = 49/135 (36%), Positives = 78/135 (57%) Frame = +2 Query: 194 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSV 373 + +R D R+L + RP ++ L A GSALV+LG T +LA KLE+ P +TP+QG++ Sbjct: 25 KGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNL 84 Query: 374 AVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDV 553 V + P+ PG P E A +++ ++ L S L+L +L + GK+ W +LDV Sbjct: 85 IVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDV 144 Query: 554 YCLNADGSLFDAALI 598 Y L+ G++ DA + Sbjct: 145 YVLDYGGNVLDACTL 159
>ECX2_METMA (Q8PTT7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 266 Score = 94.0 bits (232), Expect = 3e-19 Identities = 43/132 (32%), Positives = 77/132 (58%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R + R + +S A GSA V LG+T +L +KL+ +P ++ D+G + Sbjct: 25 RQDGRGFKDFRELKLETNVISKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + PI SP PG P E A +++ ++ + SG +++K+LC+ G++ W+ ++DV+ L Sbjct: 85 LELNPIASPEFEPGPPREDAIEMARVVDRGIRESGAIDIKKLCITVGESVWIVFIDVHIL 144 Query: 563 NADGSLFDAALI 598 N DG++ DA+ + Sbjct: 145 NNDGNIIDASCL 156
>ECX2_PYRAB (Q9V118) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/134 (35%), Positives = 76/134 (56%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 L+E R D R + RP + +G + A GSALV+LG T +L IK + P +TP+ G Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGIKTSLGEPFPDTPNMG 78 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + + P+ SP PG P E A +++ ++ + S LNL+++ ++ GK V ++ Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESKALNLEKMVIVPGKIVRVVFI 138 Query: 548 DVYCLNADGSLFDA 589 DV+ L+ DG+L DA Sbjct: 139 DVHVLDHDGNLMDA 152
>ECX2_PYRFU (Q8U0M0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 277 Score = 92.8 bits (229), Expect = 7e-19 Identities = 48/134 (35%), Positives = 76/134 (56%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 L+E R D R + RP V +G + A GSALV+LG+T +L IK + P +TP+ G Sbjct: 19 LKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPFPDTPNMG 78 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + + P+ SP PG P E A +++ ++ + S LNL+++ + GK V ++ Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVIAPGKIVRVVFI 138 Query: 548 DVYCLNADGSLFDA 589 DV+ L+ DG+L DA Sbjct: 139 DVHVLDHDGNLMDA 152
>ECX2_ARCFU (O29756) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 259 Score = 92.4 bits (228), Expect = 9e-19 Identities = 43/137 (31%), Positives = 79/137 (57%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 LR++ R D R E R + + A GSALV+LGDT ++ +K++ P +TPD+G Sbjct: 18 LRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPYPDTPDRG 77 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + V + P+ SP PG P E + +++ ++ + S ++L +L + G+ W+ ++ Sbjct: 78 VIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFV 137 Query: 548 DVYCLNADGSLFDAALI 598 D++ L+ DG+L DA+ + Sbjct: 138 DIHALDDDGNLLDASAL 154
>ECX2_METAC (Q8TGX5) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 266 Score = 92.0 bits (227), Expect = 1e-18 Identities = 42/132 (31%), Positives = 76/132 (57%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R + R + + A GSA V LG+T +L +KL+ +P ++ D+G + Sbjct: 25 RQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + PI SP PG P E A +++ ++ + SG +++K+LC+ G++ W+ ++DV+ L Sbjct: 85 LELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAIDIKKLCITVGESVWIVFIDVHVL 144 Query: 563 NADGSLFDAALI 598 N DG++ DA+ + Sbjct: 145 NDDGNIIDASCL 156
>ECX2_PYRHO (O59224) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 92.0 bits (227), Expect = 1e-18 Identities = 47/134 (35%), Positives = 75/134 (55%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 L+E R D R + RP + +G + A GSALV+LG T +L IK + P +TP+ G Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGIIEKAEGSALVKLGSTQVLVGIKTTLGEPFPDTPNMG 78 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + + P+ SP PG P E A +++ + + S LNL+++ ++ GK V ++ Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVTDRGIRESRALNLEKMVIVPGKIVRVVFI 138 Query: 548 DVYCLNADGSLFDA 589 DV+ L+ DG+L DA Sbjct: 139 DVHVLDHDGNLMDA 152
>ECX2_PYRKO (Q5JIR7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 272 Score = 89.0 bits (219), Expect = 1e-17 Identities = 46/135 (34%), Positives = 75/135 (55%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 367 LRE R D R + R + + + A GSA VRLGDT +L IK E+ P + PD+G Sbjct: 19 LREGKRIDGRSFEDYRDLEIKVNVIEKAEGSAWVRLGDTQVLVGIKAELGEPFPDLPDRG 78 Query: 368 SVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYL 547 + + P+ SP PG P E A +++ ++ + S ++L++L ++ GK V ++ Sbjct: 79 VITTNVELVPLASPTFEPGPPDENAIELARVVDRGIRESQAVDLEKLVIVPGKLVRVIFI 138 Query: 548 DVYCLNADGSLFDAA 592 DV+ L+ G+L DA+ Sbjct: 139 DVHVLDHGGNLLDAS 153
>ECX2_THEAC (Q9HIP1) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 260 Score = 84.7 bits (208), Expect = 2e-16 Identities = 45/132 (34%), Positives = 73/132 (55%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R E R T+ + A+GSA V LG+T ++A +K+E P +TPDQG + Sbjct: 26 RIDGRLPDEFRELTIIENYIPRANGSAYVALGNTRVVAGVKIEAGEPFPDTPDQGVLTTN 85 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + PI P G P + A +S+ ++ + S M++ ++L + GK W+ +LD+ L Sbjct: 86 VELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRESKMISPEKLVIEQGKKVWIVFLDINVL 145 Query: 563 NADGSLFDAALI 598 + DG+L DA+ I Sbjct: 146 DYDGNLIDASTI 157
>ECX2_THEVO (Q97BZ4) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 260 Score = 83.2 bits (204), Expect = 5e-16 Identities = 46/132 (34%), Positives = 70/132 (53%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R E R T+ V A+GSA V LG T ++A +K+E P +TPDQG + Sbjct: 26 RIDGRLPDEFREITIIENYVPRANGSAYVALGKTRVVAGVKIEAGEPFPDTPDQGVLTTN 85 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + PI P G P + A +S+ ++ + S M++ +L + GK W+ +LD+ L Sbjct: 86 VELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRESKMISPDKLVIEQGKKVWIVFLDINVL 145 Query: 563 NADGSLFDAALI 598 + DG+L DA I Sbjct: 146 DYDGNLIDACTI 157
>ECX2_PYRAE (Q8ZVN0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 79.7 bits (195), Expect = 6e-15 Identities = 45/139 (32%), Positives = 76/139 (54%) Frame = +2 Query: 176 LERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET 355 + R L R D R + R + +G V +A GSA V+LG T ++A +K+ + P + Sbjct: 20 IRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDA 79 Query: 356 PDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASW 535 PD+G + V + P SP G P E A +++ ++ + G ++ K+L + GKA + Sbjct: 80 PDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLAVEGGKA-Y 138 Query: 536 VAYLDVYCLNADGSLFDAA 592 V ++D+Y +N DG+L D A Sbjct: 139 VLWIDLYVINDDGNLIDVA 157
>EXOS9_MOUSE (Q9JHI7) Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome| component 9) (Polymyositis/scleroderma autoantigen 1) (Autoantigen PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa) (PM/Scl-75) (P75 polymyositis-scleroderma overlap syn Length = 438 Score = 76.6 bits (187), Expect = 5e-14 Identities = 40/142 (28%), Positives = 75/142 (52%) Frame = +2 Query: 173 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 352 FL R + E R D R+ + R ++ G + +G +V LG T +L + E++SP Sbjct: 13 FLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKLN 69 Query: 353 TPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKAS 532 +G + + + +P PGR ++ +++ LE L +S ++ + LC+++G+ Sbjct: 70 RATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKV 129 Query: 533 WVAYLDVYCLNADGSLFDAALI 598 W +D++ LN DG++ DAA I Sbjct: 130 WQIRVDLHLLNHDGNIIDAASI 151
>RRP45_SCHPO (O74918) Putative exosome complex exonuclease RRP45 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 45) Length = 291 Score = 73.9 bits (180), Expect = 3e-13 Identities = 42/142 (29%), Positives = 70/142 (49%) Frame = +2 Query: 173 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 352 F+ L + +R D R+L++ R + G +G V G T ++A I E+ P + Sbjct: 14 FVLNSLEKGLRLDGRQLSDFRSLEIQFG---KEYGQVDVSFGHTRVMARITTEITKPYTD 70 Query: 353 TPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKAS 532 P G ++ + P+ GR ++ VIS+ +E + S L+ + LC+ISG+ Sbjct: 71 RPFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLCIISGQKC 130 Query: 533 WVAYLDVYCLNADGSLFDAALI 598 W V+ +N DG+L DAA I Sbjct: 131 WHVRASVHFINHDGNLVDAACI 152
>EXOS9_HUMAN (Q06265) Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome| component 9) (Polymyositis/scleroderma autoantigen 1) (Autoantigen PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa) (PM/Scl-75) (P75 polymyositis-scleroderma overlap syn Length = 423 Score = 70.1 bits (170), Expect = 5e-12 Identities = 35/132 (26%), Positives = 70/132 (53%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 382 R D R+ + R ++ G + +G +V LG T +L + E++SP +G + Sbjct: 7 RLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFN 63 Query: 383 FHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAYLDVYCL 562 + + +P PGR ++ +++ +E L +S ++ + LC+++G+ W +D++ L Sbjct: 64 LELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLL 123 Query: 563 NADGSLFDAALI 598 N DG++ DAA I Sbjct: 124 NHDGNIIDAASI 135
>EXOS7_HUMAN (Q15024) Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 42) (Exosome component 7) (p8) Length = 291 Score = 68.2 bits (165), Expect = 2e-11 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%) Frame = +2 Query: 173 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 352 ++ ++E +R D R + R V VS+ GSA V+LG T +L +K E+ +P E Sbjct: 13 YIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLE 72 Query: 353 TPDQGSVAVEFHMPPICSPLVRP---GRPA-EAAPVISKALEDVLMSSGMLNLKELCLIS 520 P++G +EF + CS P GR + I+ L + + ++LK LC+ Sbjct: 73 KPNEG--YLEFFVD--CSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISP 128 Query: 521 GKASWVAYLDVYCLNADGSLFDAALI 598 + WV Y+DV L G+LFDA I Sbjct: 129 REHCWVLYVDVLLLECGGNLFDAISI 154
>RRP45_YEAST (Q05636) Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 45) Length = 305 Score = 62.8 bits (151), Expect = 7e-10 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%) Frame = +2 Query: 122 LAGEMEVEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGD 301 +A ++E+ A F L LR++ R D R + R + G G V++G+ Sbjct: 1 MAKDIEISASESKFIL----EALRQNYRLDGRSFDQFRDVEITFG---KEFGDVSVKMGN 53 Query: 302 TAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSPLVRPGR-PAEAAPVISKALEDVLM 478 T + I ++ P + P +G + + P+ G E + S+ +E + Sbjct: 54 TKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIEKSVR 113 Query: 479 SSGMLNLKELCLISGKASWVAYLDVYCLNADGSLFDAALI 598 SG L+++ LC+++G W DV+ L+ DG DA+ I Sbjct: 114 RSGALDVEGLCIVAGSKCWAVRADVHFLDCDGGFIDASCI 153
>EXOS7_MOUSE (Q9D0M0) Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 42) (Exosome component 7) Length = 291 Score = 61.6 bits (148), Expect = 2e-09 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 9/151 (5%) Frame = +2 Query: 173 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 352 ++ ++E +R D R R V VS+ GSA V+LG T +L +K E+ +P E Sbjct: 13 YIVHGVQEDLRVDGRGCEVYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLE 72 Query: 353 TPDQGSVAVEFHMPPICSPLVRP---GRPAEAAPVISKALEDVLMSSGMLN------LKE 505 P++G +EF + CS P GR + E + S+G+ N L+ Sbjct: 73 KPNEG--YLEFFVD--CSANATPEFEGRGGD-----DLGTEMLTPSTGIFNNKSSVDLRS 123 Query: 506 LCLISGKASWVAYLDVYCLNADGSLFDAALI 598 LC+ + WV Y+DV L G+LFDA I Sbjct: 124 LCISPREHCWVLYVDVLLLECGGNLFDAISI 154
>ECX1_SULAC (Q4JB27) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 243 Score = 59.7 bits (143), Expect = 6e-09 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 361 L +R D R+L E RP + LG + +A GSA+ +G+T ++A++ E+ PD Sbjct: 11 LENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPD 70 Query: 362 QGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNL 499 + S+ V +HM P + + P+ +SK + + L S+ +LNL Sbjct: 71 KASLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNL 116
>ECX1_SULTO (Q975G8) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 247 Score = 49.7 bits (117), Expect = 6e-06 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 361 L +R D R+ E RP + LG + +A GSA+ +G+T ++A++ E+ PD Sbjct: 15 LDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPD 74 Query: 362 QGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNL 499 + + V +HM P + + P+ +SK + + L S+ ++ L Sbjct: 75 RAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVEL 120
>ECX1_PYRAE (Q8ZVM9) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 49.3 bits (116), Expect = 8e-06 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 361 L+ VR D R + R +A+G VS+A GSA+V G T +A++ E+ PD Sbjct: 9 LQNGVRADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPD 68 Query: 362 QGSVAVEFHMPPICSPLVRPG-----RPAEAAPVISKALEDVLM 478 +G + V +HM P + R R E + ++ +ALE ++ Sbjct: 69 RGVMRVRYHMAPFSTKDERKSPTPSRREIEISKILREALEPAIV 112
>ECX1_SULSO (Q9UXC2) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 248 Score = 47.0 bits (110), Expect = 4e-05 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 361 L + R D R+ E R + LG + +A GSA+ +G+T +A++ E+ PD Sbjct: 14 LDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPD 73 Query: 362 QGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNL 499 + + V +HM P + + P+ +SK + + L S+ ++ L Sbjct: 74 RAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVEL 119
>ECX1_AERPE (Q9YC03) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 46.6 bits (109), Expect = 5e-05 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 361 +R+ R D R + RP + +G + +A GSALV G T +LA++ E PD Sbjct: 12 IRDGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQRFYVLPD 71 Query: 362 QGSVAVEFHMPPICSPLVRPGRPA----EAAPVISKALEDVLMS 481 + ++ V +HM P + + P+ E + V+ +ALE V+++ Sbjct: 72 RAALRVRYHMAPFSTDERKSPAPSRREIELSKVVREALEPVVLA 115
>RNPH_BRAJA (Q89WK4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 45.4 bits (106), Expect = 1e-04 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R E RP T+ G V A GS LV+ GDT +L + LE PP + +G V Sbjct: 1 MRPSRRAPDELRPVTLERGVVKYAEGSCLVKFGDTHVLVTATLEDRLPPWLKGQGRGWVT 60 Query: 377 VEFHMPP---------ICSPLVRPGRPAEAAPVISKALEDVL 475 E+ M P S + GR E +I ++L ++ Sbjct: 61 AEYGMLPRATSERTRREASAGKQSGRTVEIQRLIGRSLRTII 102
>ECX1_PYRKO (Q5JIR6) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 249 Score = 43.1 bits (100), Expect = 6e-04 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPDQGSVA 376 R D R+ E RP + +G + +A GSA V G +LA++ E+ + PD+ + Sbjct: 17 RIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHLQRPDRAILR 76 Query: 377 VEFHMPPI-CSPLVRPG---RPAEAAPVISKALEDVLM 478 V ++M P +PG R E + VI ALE L+ Sbjct: 77 VRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALL 114
>ECX1_PYRHO (O59223) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 249 Score = 43.1 bits (100), Expect = 6e-04 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPDQGSVA 376 R D R+ E RP + +G + +A+GSA + G ++A++ E+ S + PD+ + Sbjct: 17 RIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELHSKHLQRPDRAILR 76 Query: 377 VEFHMPPI-CSPLVRPG---RPAEAAPVISKALEDVLM 478 V ++M P +PG R E + VI ALE L+ Sbjct: 77 VRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALI 114
>RNPH_RHOPA (Q6NCY8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 42.4 bits (98), Expect = 0.001 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R E R ++ G V A GS LV+ GDT +L + LE PP + +G V Sbjct: 1 MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE 466 E+ M P + L R R A A + +E Sbjct: 61 AEYGMLPRAT-LERTRREASAGKQNGRTVE 89
>RNPH_RICPR (Q9ZCT5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 42.0 bits (97), Expect = 0.001 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R R+ + RP ++ L + +A GS L+++G+T ++ S E PP +QG + Sbjct: 1 MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWIT 60 Query: 377 VEFHM-PPICSPLVR--------PGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P S ++ GR E +I +A+ V +NL++L G+ Sbjct: 61 AEYGMIPGSTSHRIKREAALGKQGGRTQEIQRLIGRAMRCV------INLQKL----GER 110 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 + DV +NADG AA+ Sbjct: 111 QIIIDCDV--INADGGTRTAAI 130
>RNPH_CLOPE (Q8XI67) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 40.4 bits (93), Expect = 0.004 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 2/127 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R R+ + RP + A GS L+ +GDT +L + +E PP + +G + Sbjct: 1 MRSSGRKKEQIRPVKITRNFTKYAEGSVLIEVGDTKVLCTASIEEKVPPFLKGSGEGWIT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E++M P S R R + + +E L+ + + ++ + K W+ D Sbjct: 61 AEYNMLP-RSTQSRKQRDINKLKIDGRTMEIQRLIGRALRSAVDMKALGEKTIWI---DC 116 Query: 554 YCLNADG 574 L ADG Sbjct: 117 DVLQADG 123
>RNPH_BORPA (Q7W6C1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 250 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +2 Query: 191 RESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQG 367 R SVRP R + RP ++ G A GS LVR G+T +L + LE + P + +G Sbjct: 11 RPSVRPAGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEG 70 Query: 368 SVAVEFHMPP 397 V E+ M P Sbjct: 71 WVTAEYGMLP 80
>RNPH_RICCN (Q92GZ7) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 39.7 bits (91), Expect = 0.007 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R R+ + RP ++ L + +A GS L+++G+T ++ S E PP +QG + Sbjct: 1 MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWIT 60 Query: 377 VEFHM-PPICSPLVR--------PGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P S ++ GR E +I +A+ V+ + L E +I Sbjct: 61 AEYGMLPGSTSQRIKREAALGKQGGRTQEIQRLIGRAMRCVI---DVRKLGERQII---- 113 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 +D +NADG AA+ Sbjct: 114 -----IDCDVINADGGTRTAAI 130
>RNPH_PHOPR (Q6LVN8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R ++ RP T+ + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPSGRSTSQVRPITITRNFTAHAEGSVLVEFGDTKVICTASVEENVPRWLKGKGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BACHD (Q9K8D8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 257 Score = 39.7 bits (91), Expect = 0.007 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R+ E RP ++ + + GS L+ +G+T ++ + LE PP +G + Sbjct: 1 MRMDERKADELRPISIEINYLHHPEGSVLISIGNTKVICTASLEDRVPPFLRGQGKGWIT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + ++ +L I + W+ D Sbjct: 61 AEYSMLPRATE-QRNMRESTRGKVSGRTMEIQRLIGRALRSIIDLDKIGERTVWI---DC 116 Query: 554 YCLNADG 574 + ADG Sbjct: 117 DVIQADG 123
>RNPH_THETN (Q8RC30) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 261 Score = 38.5 bits (88), Expect = 0.015 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 6/137 (4%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET-PDQGSVAV 379 R D R E RP + A GS L+ +G+T ++ + +E PP + +G + Sbjct: 3 RIDGREFNELRPIKITRNFNKFAEGSVLIEMGETKVICTASIEDKVPPFQKGTGKGWITS 62 Query: 380 EFHMPPICSPLVRP-----GRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASWVAY 544 E+ M P + + P GRP+ I + L+ + + +L + + W+ Sbjct: 63 EYGMLPRATEVRNPREVTKGRPSGRTMEIQR-----LIGRSLRAVVDLEALGERTIWI-- 115 Query: 545 LDVYCLNADGSLFDAAL 595 D + ADG A++ Sbjct: 116 -DCDVIQADGGTRTASI 131
>RNPH_AGRT5 (Q8UIG8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 38.1 bits (87), Expect = 0.020 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R+ + R + A GS LV+ GDT +L + LE +PP +G V Sbjct: 1 MRPSGRKTDQMRKVSFERNFSKHAEGSCLVKFGDTHVLVTASLEEKTPPWLRNSGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_PHOLL (Q7MAX2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 37.7 bits (86), Expect = 0.026 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPTGRAAEQVRPITITRHYTKHAEGSVLVEFGDTKVLCNASVEEGVPRFLKGQGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_SALTY (P0A2C3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_SALTI (P0A2C4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BACSU (P28619) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 37.0 bits (84), Expect = 0.044 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R+ E RP T L +S GS L+ G+T ++ + +E PP +G + Sbjct: 1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWIT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + + + +E L+ + + +L + + W+ D Sbjct: 61 AEYSMLPRATN-QRTIRESSKGKISGRTMEIQRLIGRALRAVVDLEKLGERTIWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_IDILO (Q5QYL5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 37.0 bits (84), Expect = 0.044 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPSGRTAQQIRPVTITRNFTKHAEGSVLIEFGETKVLCNASVERGVPRFLKGKGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYSMLP 67
>RNPH_SHIFL (Q83PN2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P + + GR E +I++AL ++LK L Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALR------AAVDLKAL------G 108 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 + LD L ADG A++ Sbjct: 109 EFTITLDCDVLQADGGTRTASI 130
>RNPH_RHILO (Q98DN6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R+ E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRQFDEMRAISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNSGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RALSO (Q8XXF5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R+ + RP T+ A GS LV GDT +L + + PP + +G V Sbjct: 1 MRPSGRQPDQLRPVTLTRHYTRHAEGSVLVCFGDTHVLCTASVLPKVPPHKKGSGEGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P S R R A + E L+ M ++ +L S +LD Sbjct: 61 AEYGMLP-RSTHTRSDREAARGKQSGRTQEIQRLIGRAMRSVFDL---SALGEHTIHLDC 116 Query: 554 YCLNADGSLFDAAL 595 L ADG A++ Sbjct: 117 DVLQADGGTRTASI 130
>RNPH_ECOLI (P03842) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P + + GR E +I++AL ++LK L Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALR------AAVDLKAL------G 108 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 + LD L ADG A++ Sbjct: 109 EFTITLDCDVLQADGGTRTASI 130
>RNPH_ECOL6 (P66679) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P + + GR E +I++AL ++LK L Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALR------AAVDLKAL------G 108 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 + LD L ADG A++ Sbjct: 109 EFTITLDCDVLQADGGTRTASI 130
>RNPH_ECO57 (P66680) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.044 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P + + GR E +I++AL ++LK L Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALR------AAVDLKAL------G 108 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 + LD L ADG A++ Sbjct: 109 EFTITLDCDVLQADGGTRTASI 130
>RNPH_OCEIH (Q8EPJ5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 36.6 bits (83), Expect = 0.057 Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R + + R + +S GS L+ +G+T ++ + +E PP +G + Sbjct: 1 MRNDQREVNQLRNINITTNYISHPEGSVLIEMGNTKVICNASIEDRVPPFMRGQGKGWIT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + ++ +L I + W+ D Sbjct: 61 AEYAMLPRAT-AQRNIRESSKGKVSGRTMEIQRLIGRALRSVVDLDQIGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_GEOKA (Q5KWI5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 256 Score = 36.2 bits (82), Expect = 0.074 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E RP + + A GS L+ +GDT ++ + +E P +G + Sbjct: 1 MRADGRSSCELRPVHIHPHYMKHAEGSVLIEVGDTKVICTATVEEKVPSFMRGGGKGWIT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R A V + +E L+ + ++ +L + + W+ D Sbjct: 61 AEYGMLPRATE-QRNVREASKGKVSGRTMEIQRLIGRALRSVVDLEQLGERTIWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACSK (Q5WEM3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 250 Score = 36.2 bits (82), Expect = 0.074 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R+ + R + A GS L+ +GDT ++ + +E PP ++G +A Sbjct: 1 MRQDGRKQNQLREVEIIPHFTKHAEGSVLISVGDTKVICTASIENRVPPFLRGQNKGWLA 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R A + + +E L+ + + +L + K W+ D Sbjct: 61 AEYSMLPRATG-QRTIREAAKGKLSGRTMEIQRLIGRALRAVVDLEKLGEKTIWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACHK (Q6HD42) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 35.8 bits (81), Expect = 0.097 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W+ D Sbjct: 61 AEYAMIPRATE-QRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACCZ (Q633V4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 35.8 bits (81), Expect = 0.097 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W+ D Sbjct: 61 AEYAMIPRATE-QRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACCR (Q817P3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 35.8 bits (81), Expect = 0.097 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W+ D Sbjct: 61 AEYAMIPRATE-QRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACC1 (Q72ZT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 35.8 bits (81), Expect = 0.097 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W+ D Sbjct: 61 AEYAMIPRATE-QRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_BACAN (Q81LA9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 35.8 bits (81), Expect = 0.097 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W+ D Sbjct: 61 AEYAMIPRATE-QRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWI---DC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_YERPS (Q66GE1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.097 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_YERPE (Q8ZJP8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.097 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ERWCT (Q6DAW2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.097 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + RP T A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPTGRSAQQVRPLTFTRHYTKHAEGSVLVEFGDTKVLCNATVEEGVPRFLKGQGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BRUSU (Q8G2Y5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.097 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRAADEMRAISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNTGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BRUME (Q8YEV2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.097 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRAADEMRTISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNTGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BORPE (Q7VXY3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 35.8 bits (81), Expect = 0.097 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 379 RP R + RP ++ G A GS LVR G+T +L + LE + P + +G V Sbjct: 11 RPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEGWVTA 70 Query: 380 EFHMPP 397 E+ M P Sbjct: 71 EYGMLP 76
>RNPH_BORBR (Q7WI90) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 35.8 bits (81), Expect = 0.097 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 379 RP R + RP ++ G A GS LVR G+T +L + LE + P + +G V Sbjct: 11 RPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEGWVTA 70 Query: 380 EFHMPP 397 E+ M P Sbjct: 71 EYGMLP 76
>RNPH_MANSM (Q65W01) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 35.8 bits (81), Expect = 0.097 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + E RP + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPNNRAVNEPRPIKITRHYTKHAEGSVLVEFGDTKVICTATVEDSVPRFLKGQGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ZYMMO (Q5NRL6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 35.8 bits (81), Expect = 0.097 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R + R ++ G A GS L+ GDT +L + LE P QG V Sbjct: 1 MRPSGRTPDQLRSLSIETGFTRHAEGSCLISFGDTRVLVTASLEERLPSWLRGKGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_PASMU (Q9CJW5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.4 bits (80), Expect = 0.13 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + RP + A GS LV GDT +L + +E P + +QG V Sbjct: 1 MRPNERANNQPRPIKITRHYTKHAEGSVLVEFGDTKVLCTATVEESVPRFLKGQNQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>PNP_BUCBP (Q89AF8) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 693 Score = 35.0 bits (79), Expect = 0.17 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = +2 Query: 182 RHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 328 R L+ +R D R E R V G + HGSAL G+T L S+ L Sbjct: 308 RVLKNRIRIDGRNKDEIRTLDVRTGVLPRVHGSALFTRGETQSLVSVTL 356
>RNPH_GEOSL (Q74C79) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 34.7 bits (78), Expect = 0.22 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 10/142 (7%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R A R + + A GS LV GDT +L + +E PP G V Sbjct: 1 MRSDGRNPASLRNIRITRKYLKHAEGSVLVEFGDTKVLCTASVEESVPPFLRGKGGGWVT 60 Query: 377 VEFHMPPICSPLVRP---------GRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKA 529 E+ M P + P GR E +I ++L V +L L+ ++ Sbjct: 61 AEYSMLPRATHTRSPREAAKGKLGGRTHEIQRLIGRSLRAV---------TDLTLLGERS 111 Query: 530 SWVAYLDVYCLNADGSLFDAAL 595 +D L ADG A++ Sbjct: 112 ---VLIDCDVLQADGGTRTASI 130
>RNPH_SHEON (Q8E9L4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 34.7 bits (78), Expect = 0.22 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R A+ RP T+ + A GS LV G+T +L + P + QG V Sbjct: 1 MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_DESPS (Q6ANS2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 236 Score = 34.7 bits (78), Expect = 0.22 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 8/140 (5%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R + R RP ++ G A S L+R+G+T ++ + +E PP +G + Sbjct: 3 MRQNNRTAESLRPISIERGVQLHADASVLIRMGNTHVICGVSVEESVPPFMRGSGKGWIT 62 Query: 377 VEFHMPPICSPL-------VRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKASW 535 E+ M P + R GR E +I ++L M++L+ + G+ + Sbjct: 63 AEYGMLPCATDSRYRRETNGRSGRTMEIQRLIGRSLR------MMVDLETI----GERTL 112 Query: 536 VAYLDVYCLNADGSLFDAAL 595 DV LNADG A++ Sbjct: 113 RVDCDV--LNADGGTRTASI 130
>PNP_RICPR (Q9ZD43) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 745 Score = 34.3 bits (77), Expect = 0.28 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 319 L +++R D R + R +G + SAHGSAL G+T L S Sbjct: 311 LEKNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVS 354
>RNPH_METCA (Q602N9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 34.3 bits (77), Expect = 0.28 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP RR + R A GS LV GDT ++ + +E PP + G + Sbjct: 1 MRPSGRRPDQLRRIAFTCNYTKHAEGSVLVEFGDTRVICTASVEERVPPFLKGKGSGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RHIME (Q92SK2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 34.3 bits (77), Expect = 0.28 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R+ + R + A GS LVR GDT +L + LE P +G + Sbjct: 1 MRPSGRKTDQMRKVSFERSFSKHAEGSCLVRFGDTHVLCTASLEEKVPAWLRNGGKGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>PNP_BACSU (P50849) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15) Length = 704 Score = 33.9 bits (76), Expect = 0.37 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +2 Query: 194 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLA 316 E VRPD R + + RP + +G + HGS L G T L+ Sbjct: 312 EKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALS 352
>RNPH_VIBPA (Q87T93) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.37 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R+ + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRKADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGRGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_VIBCH (Q9KVD6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.37 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RPD R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_HAEDU (Q7VP10) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.37 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + RP + A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPNHRENNQIRPVKITRHYTRYAEGSVLIEFGETKVLCNASIEESVPRFLKGQQQGWVT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVL 475 E+ M P + + GR E +I++AL V+ Sbjct: 61 AEYGMLPRATHSRNQREAAKGKQSGRTMEIQRLIARALRAVV 102
>RNPH_RHOBA (Q7URE2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 33.9 bits (76), Expect = 0.37 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Frame = +2 Query: 197 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 373 S AR + RP + G + S S L + G T +L + +E PP E +G V Sbjct: 3 SATDSARPHDQIRPVEIECGYLESNPASVLYKSGKTIVLCTASVETNVPPWMEGRGKGWV 62 Query: 374 AVEFHM-PPICSPLVR-------PGRPAEAAPVISKALEDVL 475 E++M P SP R GR E +I ++L ++ Sbjct: 63 TAEYNMLPGSTSPRKRRDRSGKVDGRTTEIQRLIGRSLRAIV 104
>RNPH_PSEAE (P50597) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 33.5 bits (75), Expect = 0.48 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R + RP + A GS LV GDT ++ ++ E P + QG + Sbjct: 3 RPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTA 62 Query: 380 EFHMPP 397 E+ M P Sbjct: 63 EYGMLP 68
>RNPH_XANCP (Q8P5T5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 33.5 bits (75), Expect = 0.48 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R + RP + A GS LV GDT +L + +E P +G V Sbjct: 5 RPSGRTADQLRPVRIERAFTRHAEGSVLVSFGDTRVLCTASVENRVPNFLRGKGEGWVTA 64 Query: 380 EFHMPP 397 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_XANAC (Q8PH63) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 33.5 bits (75), Expect = 0.48 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R + RP + A GS LV GDT +L + +E P +G V Sbjct: 5 RPSGRTADQLRPVRIERSFTRHAEGSVLVSFGDTRVLCTASVENRVPGFLRGKGEGWVTA 64 Query: 380 EFHMPP 397 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_STRCO (Q9S2H7) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.1 bits (74), Expect = 0.63 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 R D R + RP T+ G A GS LV GDT +L + + P + +G V Sbjct: 3 RIDGRTPQQLRPVTIERGWSKHAEGSVLVSFGDTKVLCNASVTEGVPRWRKGSGEGWVTA 62 Query: 380 EFHMPP 397 E+ M P Sbjct: 63 EYAMLP 68
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 33.1 bits (74), Expect = 0.63 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +2 Query: 206 PDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP--AETPDQGSVAV 379 P A P T AL V + A + T + + E ++PP AETP+ SVAV Sbjct: 287 PVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEPETIAPPVVAETPEVASVAV 346 Query: 380 EFHMPPICSPLVRPGRPAEAAPVIS 454 PP+ P+ P APV++ Sbjct: 347 AETTPPVVPPVAAESIP---APVVA 368
>IF2_GEOSL (Q74CT3) Translation initiation factor IF-2| Length = 883 Score = 33.1 bits (74), Expect = 0.63 Identities = 27/82 (32%), Positives = 37/82 (45%) Frame = +2 Query: 215 RRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMP 394 RR+AEA P + AV+ SA L A+ ++ V +PP P VA E Sbjct: 72 RRVAEAAPAETPVEAVAPPVESAPAPLEVEAVEEAV---VQAPPVVEPP---VARESEAA 125 Query: 395 PICSPLVRPGRPAEAAPVISKA 460 P P+ +PA PV+ KA Sbjct: 126 PAEEPVAAAVKPASEPPVVQKA 147
>COBB_STRCO (Q9RJ16) Cobyrinic acid A,C-diamide synthase| Length = 486 Score = 32.7 bits (73), Expect = 0.82 Identities = 37/106 (34%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Frame = +2 Query: 152 RRLFPLAFLERHLRESVRPDARRLAEARPTTVALGA--VSSAHGSALVRLG-DTAMLASI 322 RR P+ RHL + P A R ++A A+GA ALV L T L+ Sbjct: 186 RRAAPVETPSRHL--GLVPVAERGSDAVDAVAAMGARVADGCDLEALVGLARSTGALSCA 243 Query: 323 KLE-----VMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAP 445 + V SPP P A PP PLVRPGRP AP Sbjct: 244 AWDAGEALVSSPPPPLPVPSPGAA----PP--DPLVRPGRPRPQAP 283
>RNPH_VIBVY (Q7MPT3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.7 bits (73), Expect = 0.82 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRAADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_VIBVU (Q8DDX4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.7 bits (73), Expect = 0.82 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRAADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPN (Q9X528) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 376 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPL (Q5WV28) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 376 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPH (Q5ZTZ6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 376 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPA (Q5X3P0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 376 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>VGLH_BHV1C (P27599) Glycoprotein H precursor| Length = 842 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = +1 Query: 385 PHAAYLLPACKTRTASGGCAGYLQGPGGRPHELWDAKFEGALFDQWEGFVGS 540 P A LL A A+G A G GGR E DA++E ++WE VG+ Sbjct: 4 PLCAALLAAAVLALAAGAPAAARGGAGGRSREHRDARYE---IEEWEMVVGA 52
>RNPH_HAEIN (P44444) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + R + A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPNNRENNQPRQIKITRNYTKHAEGSVLVEFGDTKVLCTATVEDAVPRFLKGQGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_PSESM (Q88BE0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 32.0 bits (71), Expect = 1.4 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 10/141 (7%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R + R + A GS LV GDT ++ ++ +E P + QG + Sbjct: 3 RPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTA 62 Query: 380 EFHMPP---------ICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKAS 532 E+ M P S + GR E +I ++L L M L ++ L Sbjct: 63 EYGMLPRATGERNQREASRGKQGGRTLEIQRLIGRSLRAAL---DMSKLGDVTL------ 113 Query: 533 WVAYLDVYCLNADGSLFDAAL 595 Y+D + ADG A++ Sbjct: 114 ---YVDCDVIQADGGTRTASI 131
>RNPH_XYLFA (Q9PD74) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R+ RP + A GS LV G+T ++ + +E P +G V Sbjct: 5 RPSGRQADALRPVRIERAFTCHAEGSVLVSFGNTLVVCTASVEAKVPVFLRNKGEGWVTA 64 Query: 380 EFHMPP 397 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_LEIXX (Q6AEK9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 251 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 188 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQ 364 + +++R D R + RP T+ A GSALV G T +L + P + Sbjct: 1 MTDTIRADGRTADQLRPVTIERAWNRKAEGSALVSFGGTRVLCTASFTNGVPRWMSGKGR 60 Query: 365 GSVAVEFHMPP 397 G V E+ M P Sbjct: 61 GWVTAEYAMLP 71
>RNPH_BURPS (Q63RV5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 197 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 373 S+RP RR + R + A G+ LV GDT ++ + + P QG + Sbjct: 5 SLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWL 64 Query: 374 AVEFHMPP 397 E+ M P Sbjct: 65 TAEYGMLP 72
>RNPH_BURMA (Q62HZ8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +2 Query: 197 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 373 S+RP RR + R + A G+ LV GDT ++ + + P QG + Sbjct: 5 SLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWL 64 Query: 374 AVEFHMPP 397 E+ M P Sbjct: 65 TAEYGMLP 72
>RNPH_PSEPK (Q88C89) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 31.6 bits (70), Expect = 1.8 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 10/141 (7%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R + R + A GS LV GDT ++ ++ +E P + QG + Sbjct: 3 RPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTA 62 Query: 380 EFHMPP---------ICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLISGKAS 532 E+ M P S + GR E +I ++L L M L ++ L Sbjct: 63 EYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAAL---DMSKLGDITL------ 113 Query: 533 WVAYLDVYCLNADGSLFDAAL 595 Y+D + ADG A++ Sbjct: 114 ---YVDCDVIQADGGTRTASI 131
>RNPH_XYLFT (Q87DG3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 379 RP R+ RP + A GS LV G+T ++ + +E P +G + Sbjct: 5 RPSGRQADALRPVRIERAFTCHAEGSVLVSFGNTLVVCTASVEAKVPVFLRNKGEGWITA 64 Query: 380 EFHMPP 397 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_NITEU (Q82XJ4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 10/101 (9%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 379 R + R A+ RP + V A GS L+ G+T ++ + +E + P + QG + Sbjct: 3 RCNNRAPAQMRPVRIIRHYVRHAEGSVLIEYGETRVICTASVIEKVPPFLKGAGQGWLTA 62 Query: 380 EFHMPP---------ICSPLVRPGRPAEAAPVISKALEDVL 475 E+ M P + + GR E +I +AL +L Sbjct: 63 EYGMLPRSTGERMQREAAKGKQSGRTMEIQRLIGRALRSIL 103
>RNPH_SYMTH (Q67SL5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 273 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R E RP + A GS L+ +G T ++ + LE PP +G + Sbjct: 1 MRQDGRLPHEMRPVRITRHYNIHAEGSVLIEVGRTRVICTATLEDRVPPFLRGRGEGWIT 60 Query: 377 VEFHMPPICSPL---------VRPGRPAEAAPVISKALEDVL 475 E+ M P + + GR E +I +AL V+ Sbjct: 61 AEYGMLPRATGQRTAREAARGRQGGRTMEIQRLIGRALRSVI 102
>RNPH_COXBU (Q83EL9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 376 +RP R E RP + A GS LV LG+T ++ + + E + + +QG + Sbjct: 1 MRPSKRAANELRPLSFTTQFTRYAEGSVLVTLGNTKVICNASIVEGVPRFLKNSEQGWLT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>RRP41_SCHPO (O42872) Putative exosome complex exonuclease RRP41 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 41) Length = 242 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 194 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 322 E +R D RR E R +G S +GSA + LG+T +L + Sbjct: 10 EGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIV 52
>EXOS4_HUMAN (Q9NPD3) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) (p12A) Length = 244 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +2 Query: 170 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 322 A LE + R D RR E R +G + A GSA + G+T LA + Sbjct: 1 AGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVV 51
>RNPH_ANASP (Q8Z0M2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 8/99 (8%) Frame = +2 Query: 203 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET-PDQGSVAV 379 RPD R+ E RP A GS L G+T +L ++ + P T +G + Sbjct: 5 RPDGRKPYELRPINFHTKFTRFAPGSVLTICGETKVLCTVSVAESVPKFLTGSGKGWLTA 64 Query: 380 EFHMPPICSP-------LVRPGRPAEAAPVISKALEDVL 475 E+ M P + L GR E +I ++L L Sbjct: 65 EYRMLPSATQQRHERELLKLSGRTQEIQRLIGRSLRAAL 103
>SOX11_HUMAN (P35716) Transcription factor SOX-11| Length = 441 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +2 Query: 245 VALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSP 409 ++L SAH ++ +LG A ++ L ++ ++ +GS+ F P C+P Sbjct: 365 LSLNFSQSAHSASEQQLGGGAAAGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTP 419
>RNPH_LISMO (Q8Y7N6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 31.2 bits (69), Expect = 2.4 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R R V + GS L+ G+T ++ S +E PP +G ++ Sbjct: 1 MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWIS 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W LD Sbjct: 61 AEYSMLPRATN-TRNIRESSKGKVTGRTMEIQRLIGRALRAVVDLDALGERTIW---LDC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>RNPH_LISMF (Q720J1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 31.2 bits (69), Expect = 2.4 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R R V + GS L+ G+T ++ S +E PP +G ++ Sbjct: 1 MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWIS 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W LD Sbjct: 61 AEYSMLPRATN-TRNIRESSKGKVTGRTMEIQRLIGRALRAVVDLDALGERTIW---LDC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>MYO5A_RAT (Q9QYF3) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) Length = 1828 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -1 Query: 531 EAFPLIKQSSFKFSIPELMRTSSRALEITGAASAGRPGLT 412 E ++K S FK +PEL + +A+ T A S+GR LT Sbjct: 575 EQIKVLKSSKFKM-LPELFQDDEKAISPTSATSSGRTPLT 613
>EXOS4_MOUSE (Q921I9) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) Length = 244 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +2 Query: 170 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 322 A LE + R D RR E R +G + A GSA + G+T LA + Sbjct: 1 AGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVV 51
>RNPH_CHRVO (Q7MBD4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP R R + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPSQRSADAMRVVRLTRSYTKHAEGSVLVEFGDTKVICTASVEETVPSFLKGKGQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 30.8 bits (68), Expect = 3.1 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +2 Query: 227 EARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVM--SPPAETPDQGSVAVEFHMPPI 400 E++P TVA SSA + LG A L ++ V +PPA++ Sbjct: 492 ESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQS--------------- 536 Query: 401 CSPLVRPGRPAEAAPV 448 +P + PG PA +APV Sbjct: 537 LNPFLAPGAPANSAPV 552
>MYO5A_HUMAN (Q9Y4I1) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) (Myosin heavy chain 12) (Myoxin) Length = 1855 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -1 Query: 531 EAFPLIKQSSFKFSIPELMRTSSRALEITGAASAGRPGLT 412 E ++K S FK +PEL + +A+ T A S+GR LT Sbjct: 575 EQIKVLKSSKFKM-LPELFQDDEKAISPTSATSSGRTPLT 613
>PNP_BUCAI (P57454) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 707 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +2 Query: 134 MEVE-AYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAM 310 +E+E ++++ +R L R D R R V G + HGSAL G+T Sbjct: 291 LEIEDIFQKIEKKVVRKRILSNQTRIDGREKDMIRALDVRTGILPRTHGSALFTRGETQS 350 Query: 311 LASIKL 328 L S+ L Sbjct: 351 LVSVTL 356
>RNPH_LISIN (Q92CH1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 30.8 bits (68), Expect = 3.1 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R D R R V + GS L+ G+T ++ S +E PP +G ++ Sbjct: 1 MRFDGREKNALREIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWIS 60 Query: 377 VEFHMPPICSPLVRPGRPAEAAPVISKALE-DVLMSSGMLNLKELCLISGKASWVAYLDV 553 E+ M P + R R + V + +E L+ + + +L + + W LD Sbjct: 61 AEYSMLPRATN-TRNIRESSKGKVTGRTMEIQRLIGRALRAVVDLDALGERTIW---LDC 116 Query: 554 YCLNADGSLFDAAL 595 + ADG A++ Sbjct: 117 DVIQADGGTRTASI 130
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -3 Query: 466 LQGLGDNRRSLRWPSWSYKRGADRRHVELHS 374 L GL + R L W W YK G + LHS Sbjct: 563 LNGLNEGTRDLTWQKWFYKVGLKGEALSLHS 593
>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| (hNotch4) [Contains: Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 2003 Score = 30.8 bits (68), Expect = 3.1 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Frame = +1 Query: 343 PRRDPGPRISRCGVPHAAYLLPACKTRTASGGCAGYLQGPGGRPHELWD-AKFEGALFDQ 519 P PGPR + G C+ R+ G C GPGG WD + D Sbjct: 1162 PHSSPGPRCQKPGAK-------GCEGRSGDGACDAGCSGPGGN----WDGGDCSLGVPDP 1210 Query: 520 WEGFVGSILGCLLFECRWISFR 585 W+ GC W+ FR Sbjct: 1211 WK-------GCPSHSRCWLLFR 1225
>MYO5A_MOUSE (Q99104) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) Length = 1853 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -1 Query: 531 EAFPLIKQSSFKFSIPELMRTSSRALEITGAASAGRPGLT 412 E ++K S FK +PEL + +A+ T A S+GR LT Sbjct: 575 EQIKVLKSSKFKM-LPELFQDDEKAISPTSATSSGRTPLT 613
>RNPH_TROWT (Q83FT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R ++R E RP + G A GSAL+ G+T +L + + PP G + Sbjct: 11 LRKNSRAHDEIRPVKIIRGWNIYAEGSALIAFGNTRVLCNATFQRGVPPFLRGQRSGWIT 70 Query: 377 VEFHMPP 397 E+ M P Sbjct: 71 AEYAMLP 77
>RNPH_TROW8 (Q83HF6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +R ++R E RP + G A GSAL+ G+T +L + + PP G + Sbjct: 11 LRKNSRAHDEIRPVKIIRGWNIYAEGSALIAFGNTRVLCNATFQRGVPPFLRGQRSGWIT 70 Query: 377 VEFHMPP 397 E+ M P Sbjct: 71 AEYAMLP 77
>RNPH_DEIRA (Q9RU11) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +2 Query: 209 DARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVAVEF 385 + R RP +V G A GSA +++G T +LA++ L + +P +G + E+ Sbjct: 10 EGRDALTPRPVSVQRGVNPHAPGSAHLKMGRTEILATVTLDDKPAPHMRGKKEGWLTAEY 69 Query: 386 HMPP 397 M P Sbjct: 70 SMLP 73
>PATR_MYCTU (P72039) Putative phenylalanine aminotransferase (EC 2.6.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 170 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLG 298 A++E ++R+ +RPD+ L A V L S A+G A +R+G Sbjct: 186 AYVE-YIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIG 227
>PATR_MYCBO (Q7TVQ0) Putative phenylalanine aminotransferase (EC 2.6.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 4.1 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 170 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLG 298 A++E ++R+ +RPD+ L A V L S A+G A +R+G Sbjct: 186 AYVE-YIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIG 227
>K2C5_RAT (Q6P6Q2) Keratin, type II cytoskeletal 5 (Cytokeratin-5) (CK-5)| (Keratin-5) (K5) Length = 576 Score = 30.4 bits (67), Expect = 4.1 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -1 Query: 426 RPGLTSGEQIGGMWNSTATDPWSGVSAGGDITSSLIDASMAVSPRRT 286 R GL SG +GG S ++ G S+GG +SS+ S S RR+ Sbjct: 527 RRGLGSGLSVGGSGFSASSGQGGGFSSGGGSSSSVKFVSTTSSSRRS 573
>EFG_THIDA (Q3SLQ2) Elongation factor G (EF-G)| Length = 696 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +2 Query: 176 LERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET 355 + ++L E P+A +A R T+A V G+A G AML + +E+M P + Sbjct: 234 MNKYLEEGDLPEADIIAALRARTIASEIVPMMCGTAFKNKGVQAMLDKV-IELMPAPTDI 292 Query: 356 P 358 P Sbjct: 293 P 293
>PCYA_NOSPU (Q93TM9) Phycocyanobilin:ferredoxin oxidoreductase (EC 1.3.7.5)| Length = 245 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 302 TAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALE 466 T LA + + S P E P+ G++ +F + VRPG P E A +S+ E Sbjct: 131 TTALAQLPVLNFSQPRELPEWGNIFSDFCI------FVRPGSPEEEAMFLSRVRE 179
>RNPH_PASHA (Q9AES0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 200 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 376 +RP+ R + R + A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVEESVPRFLKGQQQGWVT 60 Query: 377 VEFHMPP 397 E+ M P Sbjct: 61 AEYGMLP 67
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +2 Query: 206 PDARRLAEARPTTVALGA----VSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSV 373 P R + P T+ + SSA G+ + +A A+ + + PPA P GS Sbjct: 1016 PSLRGSSTTAPGTITTDSGPAVASSASGTGSTTIATSANSAASTVNALGPPATGPSGGSP 1075 Query: 374 AVEFHMPP 397 A H+PP Sbjct: 1076 AQ--HLPP 1081
>Y5071_PSESM (Q87V70) UPF0312 protein PSPTO5071 precursor| Length = 192 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -1 Query: 513 KQSSFKFSIPELMRTSSRALEITGAASAGRPGLTSGEQIGGMWNSTATDPWSGVSAGGDI 334 K KF + T + ++TG + G+T I +N DPW G AG + Sbjct: 102 KYPEAKFVSTAVKSTGEKTADVTGDLTLH--GVTKPIVIKATFNGEGKDPWGGYRAGFNG 159 Query: 333 TSSL 322 TS+L Sbjct: 160 TSTL 163
>Y457_PSEU2 (Q4ZZ95) UPF0312 protein Psyr_0457 precursor| Length = 192 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -1 Query: 513 KQSSFKFSIPELMRTSSRALEITGAASAGRPGLTSGEQIGGMWNSTATDPWSGVSAGGDI 334 K KF + T + ++TG + G+T I +N DPW G AG + Sbjct: 102 KYPEAKFVSTAVKSTGEKTADVTGDLTLH--GVTKPIVIKATFNGEGKDPWGGYRAGFNG 159 Query: 333 TSSL 322 TS+L Sbjct: 160 TSTL 163
>Y448_PSE14 (Q48PB8) UPF0312 protein PSPPH_0448 precursor| Length = 192 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -1 Query: 513 KQSSFKFSIPELMRTSSRALEITGAASAGRPGLTSGEQIGGMWNSTATDPWSGVSAGGDI 334 K KF + T + ++TG + G+T I +N DPW G AG + Sbjct: 102 KYPEAKFVSTAVKSTGEKTADVTGDLTLH--GVTKPIVIKATFNGEGKDPWGGYRAGFNG 159 Query: 333 TSSL 322 TS+L Sbjct: 160 TSTL 163
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +2 Query: 224 AEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL--EVMSPPAE 352 AEA TT G S HGS +++M ++I L E MSPP E Sbjct: 411 AEAGSTTSVSGHGGSGHGSGAAFSANSSMKSAINLGNEKMSPPEE 455
>SSG1_MANES (Q43784) Granule-bound starch synthase 1, chloroplast precursor (EC| 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) Length = 608 Score = 30.0 bits (66), Expect = 5.3 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 9/71 (12%) Frame = -1 Query: 477 MRTSSRALEITGAASAGRPG--LTSGEQIGGMWNSTATDPWSGVSAGGDITSSLIDAS-- 310 M+T S+A++ A GRP + G + ++ PWS GD+ L A Sbjct: 54 MKTQSKAVKKVSATGNGRPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMAA 113 Query: 309 -----MAVSPR 292 M VSPR Sbjct: 114 RGHRVMTVSPR 124
>NLGN3_MOUSE (Q8BYM5) Neuroligin-3 precursor (Gliotactin homolog)| Length = 825 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/79 (27%), Positives = 31/79 (39%) Frame = +2 Query: 341 PPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVISKALEDVLMSSGMLNLKELCLIS 520 PP P + H PP+C + P PV A D+ +++ + E CL Sbjct: 83 PPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTANLDI-VATYIQEPNEDCL-- 139 Query: 521 GKASWVAYLDVYCLNADGS 577 YL+VY DGS Sbjct: 140 -------YLNVYVPTEDGS 151
>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) Length = 783 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +2 Query: 140 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 319 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNVVAKEVFRNIILNEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 320 IKLE 331 + + Sbjct: 397 VTFD 400
>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +2 Query: 140 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 319 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNVVAKEVFRSIVLNEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 320 IKLE 331 + + Sbjct: 397 VTFD 400
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney| disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 6.9 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +2 Query: 239 TTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSPLVR 418 T A +S+A+ SALV + + ++ SIK+ GS+ +E P + S + R Sbjct: 1444 TVTASNNISAANDSALVEVQEPVLVTSIKV-----------NGSLGLELQQPYLFSAVGR 1492 Query: 419 PGRPA 433 GRPA Sbjct: 1493 -GRPA 1496
>MRAW_XANC5 (Q3BXF9) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 337 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +2 Query: 83 GMAAETDATAPGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAV 262 G+ A DA PGG + + F+ R+ + P RRL EA+P L V Sbjct: 221 GLDAALDALKPGGRLAVISFHSLEDRIVKQFMARYAKAP--PSNRRLPEAQPFVPTLQLV 278 Query: 263 SSA 271 S A Sbjct: 279 SGA 281
>SNPC3_BOVIN (Q5E9M5) snRNA-activating protein complex subunit 3 (SNAPc subunit| 3) (snRNA-activating protein complex 50 kDa subunit) (SNAPc 50 kDa subunit) (Small nuclear RNA-activating complex polypeptide 3) Length = 412 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/60 (33%), Positives = 23/60 (38%) Frame = +1 Query: 325 ARGDVAPRRDPGPRISRCGVPHAAYLLPACKTRTASGGCAGYLQGPGGRPHELWDAKFEG 504 A G + R+DP P CG P Y LP TR G G ELW + G Sbjct: 10 ACGRMEDRQDPAPSSGGCGFPE--YELPELNTRAFHVGAFG----------ELWRCRLRG 57
>PNP_PSEPU (O87792) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 701 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +2 Query: 182 RHLRESV-----RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAML 313 R +RE++ R D R RP + +G + HGSAL G+T L Sbjct: 304 RTVRENIVNGKPRIDGRDNKTVRPLNIEVGVLPKTHGSALFTRGETQAL 352
>PSAF_PORPU (P51193) Photosystem I reaction center subunit III (PSI-F)| Length = 185 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%) Frame = +1 Query: 415 KTRTASGGCAGYLQGPGGRPHELWDAK--------FEGALF---DQWEGFVG 537 KTR A+ G AG L G G PH + D + F G LF W G+VG Sbjct: 74 KTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVG 125
>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 29.3 bits (64), Expect = 9.1 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +2 Query: 140 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 319 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNIVAKEVFRSIILNEYKRCDGRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 320 IKLE 331 + + Sbjct: 397 VTFD 400
>Y4981_PSEPK (Q88D47) UPF0312 protein PP4981 precursor| Length = 192 Score = 29.3 bits (64), Expect = 9.1 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = -1 Query: 513 KQSSFKFSIPELMRTSSRALEITGAASAGRPGLTSGEQIGGMWNSTATDPWSGVSAGGDI 334 K KF + T + ++TG + G+T +N DPW G AG + Sbjct: 102 KYPDAKFVSTSVKSTGDKTADVTGDLTMH--GVTKPVTFKATFNGEGKDPWGGERAGFNA 159 Query: 333 TSSL 322 T++L Sbjct: 160 TTTL 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,523,715 Number of Sequences: 219361 Number of extensions: 1043949 Number of successful extensions: 4682 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 4478 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4672 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
