Clone Name | bart38f08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment) | 30 | 5.2 | 2 | EC2_ARATH (Q42377) EC protein homolog 2 | 30 | 6.8 | 3 | FBLN1_MOUSE (Q08879) Fibulin-1 precursor (Basement-membrane prot... | 29 | 8.9 |
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>FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment)| Length = 598 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 5/32 (15%) Frame = +1 Query: 226 SGQPMDALATCIERCGCV-----PCPTGKVCI 306 +G DALA CI+ C+ PCPTG CI Sbjct: 212 NGFIQDALANCIDINECLSIVSAPCPTGHTCI 243
>EC2_ARATH (Q42377) EC protein homolog 2| Length = 85 Score = 29.6 bits (65), Expect = 6.8 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = +1 Query: 244 ALATCIERCGC-VPCPTGKVC 303 A A+C +RCGC PCP G+ C Sbjct: 9 ASASCNDRCGCPSPCPGGESC 29
>FBLN1_MOUSE (Q08879) Fibulin-1 precursor (Basement-membrane protein 90) (BM-90)| Length = 705 Score = 29.3 bits (64), Expect = 8.9 Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 4/73 (5%) Frame = +1 Query: 100 HACPGIPSCSTLVSSHMAAPALKFXXXXXXXXXXXXXXXXXXSGQPMDALATCIERCGCV 279 H CP C + S P L+ SG DAL CI+ C+ Sbjct: 273 HNCPPDFICQNTLGSFRCRPKLQCK-----------------SGFIQDALGNCIDINECL 315 Query: 280 ----PCPTGKVCI 306 PCP G+ CI Sbjct: 316 SISAPCPVGQTCI 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,979,078 Number of Sequences: 219361 Number of extensions: 1016134 Number of successful extensions: 2447 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2335 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2441 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)