ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart38f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 203 cggccgcgctggtgccggccgcg 225 ||||||||||||||||||||||| Sbjct: 2636076 cggccgcgctggtgccggccgcg 2636098
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 169 ttcgccgccgtcatgctcctggccgcc 195 |||||||||||| |||||||||||||| Sbjct: 1860609 ttcgccgccgtcctgctcctggccgcc 1860583 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 ttcgccgccgtcatgctcctggccgc 87 |||||||||||| ||||||||||||| Sbjct: 1860609 ttcgccgccgtcctgctcctggccgc 1860584
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 ctgcgccgccaggtgccgctgc 351 |||||||||||||||||||||| Sbjct: 1062912 ctgcgccgccaggtgccgctgc 1062891
>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3 Contains the 5' end of one variant of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2) and a CpG island, complete sequence Length = 133394 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 480 tgtgcgtgtgtttgtgtggtaa 501 |||||||||||||||||||||| Sbjct: 4274 tgtgcgtgtgtttgtgtggtaa 4253
>gb|AE004987.1| Halobacterium sp. NRC-1 section 18 of 170 of the complete genome Length = 10016 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 216 gccggccgcgtcggggcagccgatgg 241 |||||||||||||||| ||||||||| Sbjct: 3595 gccggccgcgtcggggtagccgatgg 3620
>ref|NM_173159.1| Homo sapiens neuronal PAS domain protein 3 (NPAS3), transcript variant 2, mRNA Length = 2763 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2428 ccctctgcgcggccgtgctggtggcggcc 2400
>ref|NM_022123.1| Homo sapiens neuronal PAS domain protein 3 (NPAS3), transcript variant 1, mRNA Length = 3428 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2446 ccctctgcgcggccgtgctggtggcggcc 2418
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 ggccgcgctggtgccggccgc 224 ||||||||||||||||||||| Sbjct: 2906034 ggccgcgctggtgccggccgc 2906014 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gctggtgccggccgcgtcgg 229 |||||||||||||||||||| Sbjct: 3381917 gctggtgccggccgcgtcgg 3381936
>emb|CR597514.1| full-length cDNA clone CS0DF037YG05 of Fetal brain of Homo sapiens (human) Length = 1759 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 190 ccctctgcgcggccgtgctggtggcggcc 162
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 215 tgccggccgcgtcggggcagccgat 239 |||||||||||||| |||||||||| Sbjct: 1759955 tgccggccgcgtcgcggcagccgat 1759931 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctgcgccgccaggtgccgct 349 |||||||||||||||||||| Sbjct: 447407 ctgcgccgccaggtgccgct 447426
>dbj|D70898.1| Oryza sativa (indica cultivar-group) DNA for RiLim15, complete cds Length = 6952 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ttcgccgccgtcatgctcctggccg 86 |||||||||||| |||||||||||| Sbjct: 6884 ttcgccgccgtcgtgctcctggccg 6860 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 ttcgccgccgtcatgctcctggccg 193 |||||||||||| |||||||||||| Sbjct: 6884 ttcgccgccgtcgtgctcctggccg 6860
>gb|AF164438.1|AF164438 Homo sapiens basic-helix-loop-helix-PAS protein (MOP6) mRNA, complete cds Length = 3428 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2446 ccctctgcgcggccgtgctggtggcggcc 2418
>gb|AY157302.1| Homo sapiens neuronal PAS3 transcript variant 1 (NPAS3) mRNA, complete cds Length = 3404 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2435 ccctctgcgcggccgtgctggtggcggcc 2407
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gccgcgctggtgccggccgcg 225 ||||||||||||||||||||| Sbjct: 3606782 gccgcgctggtgccggccgcg 3606762
>emb|AL157689.3|CNS01RG1 Human chromosome 14 DNA sequence BAC R-1075M22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216457 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 91385 ccctctgcgcggccgtgctggtggcggcc 91357
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence Length = 337658 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 catcttgctctactctagttt 139 ||||||||||||||||||||| Sbjct: 142707 catcttgctctactctagttt 142727
>dbj|AB055962.1| Homo sapiens NPAS3 mRNA, complete cds Length = 2802 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2467 ccctctgcgcggccgtgctggtggcggcc 2439
>dbj|AB054576.1| Homo sapiens NPAS3v mRNA for NPAS3 variant, complete cds Length = 2763 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2428 ccctctgcgcggccgtgctggtggcggcc 2400
>dbj|AB054575.1| Homo sapiens mRNA for NPAS3 (MOP6), complete cds Length = 2926 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 ccctctgcgcggccgcgctggtgccggcc 222 ||||||||||||||| ||||||| ||||| Sbjct: 2422 ccctctgcgcggccgtgctggtggcggcc 2394
>gb|AC167169.2| Mus musculus BAC clone RP24-257G14 from chromosome 16, complete sequence Length = 150549 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 tgtgcgtgtgtttgtgtggt 499 |||||||||||||||||||| Sbjct: 125915 tgtgcgtgtgtttgtgtggt 125934
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ctgtgcgtgtgtttgtgtgg 498 |||||||||||||||||||| Sbjct: 410212 ctgtgcgtgtgtttgtgtgg 410231
>gb|AF412432.1| Dendrobates ventrimaculatus clone DiShap cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 487 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 gtatccatgtaatgtattgcctgt 482 ||||||||||||||||| |||||| Sbjct: 464 gtatccatgtaatgtatagcctgt 441
>gb|BT025208.1| Drosophila melanogaster FI01108 full insert cDNA Length = 2827 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 251 cctgtgcgtgtgtttgtgtg 232
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgcgctggtgccggccgcgt 226 |||||||||||||||||||| Sbjct: 2236390 cgcgctggtgccggccgcgt 2236409 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gccgcgctggtgccggccgc 224 |||||||||||||||||||| Sbjct: 1053931 gccgcgctggtgccggccgc 1053950
>gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome 3, complete sequence Length = 195731 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gtgcgtgtgtttgtgtggta 500 |||||||||||||||||||| Sbjct: 27288 gtgcgtgtgtttgtgtggta 27269
>gb|AC093620.3| Homo sapiens BAC clone RP13-901C16 from 7, complete sequence Length = 71183 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ctgtgcgtgtgtttgtgtgg 498 |||||||||||||||||||| Sbjct: 32725 ctgtgcgtgtgtttgtgtgg 32706
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 tgccggccgcgtcggggcagccga 238 |||||||||||||| ||||||||| Sbjct: 34979 tgccggccgcgtcgcggcagccga 35002
>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the 3' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for macrophage galactose N-acetyl-galactosamine specific lectin 1, the gene for a novel RNA polymerase Rpb1 C-terminal repeat domain containing protein, three novel genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12 gene for arachidonate 12-lipoxygenase and four CpG islands, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 471 tgtattgcctgtgcgtgtgtttgtgtgg 498 |||||| |||||| |||||||||||||| Sbjct: 165661 tgtattacctgtgtgtgtgtttgtgtgg 165634
>emb|AL954726.31| Zebrafish DNA sequence from clone CH211-274A9 in linkage group 23, complete sequence Length = 164507 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tgtgcgtgtgtttgtgtggt 499 |||||||||||||||||||| Sbjct: 162629 tgtgcgtgtgtttgtgtggt 162610
>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete sequence Length = 212982 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 471 tgtattgcctgtgcgtgtgtttgtgtgg 498 |||||| |||||| |||||||||||||| Sbjct: 145641 tgtattacctgtgtgtgtgtttgtgtgg 145614
>emb|CR394527.6| Zebrafish DNA sequence from clone CH211-254P11 in linkage group 5, complete sequence Length = 75514 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tgtgcgtgtgtttgtgtggt 499 |||||||||||||||||||| Sbjct: 36549 tgtgcgtgtgtttgtgtggt 36530
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tgtattgcctgtgcgtgtgt 490 |||||||||||||||||||| Sbjct: 1611 tgtattgcctgtgcgtgtgt 1630
>gb|AC023718.4| Drosophila melanogaster X BAC RP98-7P15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164415 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 attgcctgtgcgtgtgtttgtgtg 497 ||||||||||||||||| |||||| Sbjct: 87361 attgcctgtgcgtgtgtgtgtgtg 87338
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tgtattgcctgtgcgtgtgt 490 |||||||||||||||||||| Sbjct: 40890 tgtattgcctgtgcgtgtgt 40871
>gb|AC106708.7| Homo sapiens 3 BAC RP11-392A22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127109 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 tctgttggggatgttggtca 540 |||||||||||||||||||| Sbjct: 68821 tctgttggggatgttggtca 68840
>gb|AY118309.1| Drosophila melanogaster GH14362 full insert cDNA Length = 3181 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 attgcctgtgcgtgtgtttgtgtg 497 ||||||||||||||||| |||||| Sbjct: 178 attgcctgtgcgtgtgtgtgtgtg 201
>ref|NM_169080.1| Drosophila melanogaster Regena CG2161-RA, transcript variant A (Rga), mRNA Length = 2830 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 275 cctgtgcgtgtgtttgtgtg 256
>ref|NM_167285.2| Drosophila melanogaster CG11727-RA, transcript variant A (CG11727), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 attgcctgtgcgtgtgtttgtgtg 497 ||||||||||||||||| |||||| Sbjct: 178 attgcctgtgcgtgtgtgtgtgtg 201
>gb|AY094772.1| Drosophila melanogaster GM14102 full insert cDNA Length = 2824 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 251 cctgtgcgtgtgtttgtgtg 232
>ref|NM_132488.3| Drosophila melanogaster CG11727-RB, transcript variant B (CG11727), mRNA Length = 3166 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 attgcctgtgcgtgtgtttgtgtg 497 ||||||||||||||||| |||||| Sbjct: 178 attgcctgtgcgtgtgtgtgtgtg 201
>ref|NM_079515.2| Drosophila melanogaster Regena CG2161-RB, transcript variant B (Rga), mRNA Length = 2812 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 275 cctgtgcgtgtgtttgtgtg 256
>gb|AF265548.1| Oryza sativa meiotic protein Dmc1A (DMC1A) gene, complete cds Length = 7054 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 tcgccgccgtcatgctcctggccg 86 ||||||||||| |||||||||||| Sbjct: 6697 tcgccgccgtcgtgctcctggccg 6674 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 tcgccgccgtcatgctcctggccg 193 ||||||||||| |||||||||||| Sbjct: 6697 tcgccgccgtcgtgctcctggccg 6674
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 cgcggccgcgctggtgccggccgc 224 |||||||| ||||||||||||||| Sbjct: 2604580 cgcggccgggctggtgccggccgc 2604557
>dbj|AK172680.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830228D02 product:toll-like receptor 7, full insert sequence Length = 4936 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 atgtattgcctgtgcgtgtgtttgtgtg 497 |||||||||||||| |||||| |||||| Sbjct: 1936 atgtattgcctgtgtgtgtgtgtgtgtg 1963
>gb|AC092717.2| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR05N10, complete sequence Length = 169600 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 45653 cctgtgcgtgtgtttgtgtg 45672
>gb|AC007173.6|AC007173 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR01A03, complete sequence Length = 155254 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 18739 cctgtgcgtgtgtttgtgtg 18758
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 tcgccgccgtcatgctcctggccg 193 ||||||||||| |||||||||||| Sbjct: 2151950 tcgccgccgtcgtgctcctggccg 2151973 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcgccgccgtcatgctcctggccg 86 ||||||||||| |||||||||||| Sbjct: 2151950 tcgccgccgtcgtgctcctggccg 2151973
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 157161 cctgtgcgtgtgtttgtgtg 157180
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tgcatcgagcgctgcggctg 275 |||||||||||||||||||| Sbjct: 478959 tgcatcgagcgctgcggctg 478978
>gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, region 83A-83B, BAC clone BACR03P13, complete sequence Length = 168448 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 42151 cctgtgcgtgtgtttgtgtg 42170
>gb|U75467.1|DMU75467 Drosophila melanogaster Rga and Atu genes, complete cds Length = 8741 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 3114 cctgtgcgtgtgtttgtgtg 3095
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 cgccgtcatgctcctggccgccctctgc 201 ||||||| |||||||||||||| ||||| Sbjct: 3806551 cgccgtcctgctcctggccgccgtctgc 3806524
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcgccgccaggtgccgctgc 351 |||||||||||||||||||| Sbjct: 5709861 gcgccgccaggtgccgctgc 5709842
>dbj|AK110435.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-C04, full insert sequence Length = 2306 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gcggccgcgctggtgccggc 221 |||||||||||||||||||| Sbjct: 1525 gcggccgcgctggtgccggc 1506
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 caagccgagtagcctgtacatgct 582 ||||||| |||||||||||||||| Sbjct: 3578777 caagccgtgtagcctgtacatgct 3578754
>gb|AC005810.3|AC005810 Drosophila melanogaster, chromosome 2R, region 36E1-36E3, P1 clone DS07089, complete sequence Length = 32772 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 23206 cctgtgcgtgtgtttgtgtg 23187
>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete sequence Length = 262745 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 119388 cctgtgcgtgtgtttgtgtg 119407
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tgtattgcctgtgcgtgtgt 490 |||||||||||||||||||| Sbjct: 18732 tgtattgcctgtgcgtgtgt 18751
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 attgcctgtgcgtgtgtttgtgtg 497 ||||||||||||||||| |||||| Sbjct: 84589 attgcctgtgcgtgtgtgtgtgtg 84566
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete sequence Length = 326091 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 202222 cctgtgcgtgtgtttgtgtg 202241
>gb|AC005578.1|AC005578 Homo sapiens chromosome 19, cosmid F20887, complete sequence Length = 43297 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 tgctcctggccgccctctgc 201 |||||||||||||||||||| Sbjct: 15898 tgctcctggccgccctctgc 15917
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 tcgccgccgtcatgctcctggccg 193 ||||||||||| |||||||||||| Sbjct: 2151894 tcgccgccgtcgtgctcctggccg 2151917 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcgccgccgtcatgctcctggccg 86 ||||||||||| |||||||||||| Sbjct: 2151894 tcgccgccgtcgtgctcctggccg 2151917
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 tcgccgccgtcatgctcctggccg 193 ||||||||||| |||||||||||| Sbjct: 34174 tcgccgccgtcgtgctcctggccg 34197 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcgccgccgtcatgctcctggccg 86 ||||||||||| |||||||||||| Sbjct: 34174 tcgccgccgtcgtgctcctggccg 34197
>emb|AJ845083.2| Streptomyces tenjimariensis istamycin biosynthesis cluster, strain ATCC 31603 Length = 67904 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ggccgcgctggtgccggccg 223 |||||||||||||||||||| Sbjct: 48574 ggccgcgctggtgccggccg 48555
>gb|AC161495.3| Mus musculus chromosome 5, clone RP23-393A24, complete sequence Length = 194459 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgtgcgtgtgtttgtgtg 497 |||||||||||||||||||| Sbjct: 148518 cctgtgcgtgtgtttgtgtg 148499
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ggccgcgctggtgccggccg 223 |||||||||||||||||||| Sbjct: 43329 ggccgcgctggtgccggccg 43348
>emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on chromosome X, complete sequence Length = 201223 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 atgtattgcctgtgcgtgtgtttgtgtg 497 |||||||||||||| |||||| |||||| Sbjct: 130472 atgtattgcctgtgtgtgtgtgtgtgtg 130445
>gb|DQ243232.1| Bombyx mori chromosome 23 microsatellite S2306-R sequence Length = 385 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 478 cctgtgcgtgtgtttgtgtggtaataaa 505 |||||| |||||| |||||||||||||| Sbjct: 163 cctgtgtgtgtgtgtgtgtggtaataaa 190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,186,557 Number of Sequences: 3902068 Number of extensions: 4186557 Number of successful extensions: 147841 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 146683 Number of HSP's gapped (non-prelim): 1158 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
