ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 603 bits (304), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 19 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 78 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 79 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 138 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 139 tccgatgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggac 198 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| Sbjct: 199 gctgcgctgctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgag 258 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 aagatcgctgatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 318 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || ||||||||||||||||| |||||||| || ||||| || ||||||| |||| Sbjct: 319 aaatcgttgtatttcataagggttggagagaaggagaaggcactagaacagcttaaagtt 378 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||||||| Sbjct: 379 actgaaggaaaaactgtagctgttgggcaaaagatggaccttgttttccacactttacag 438 Query: 517 attggccttttccatatggattttgatctcatctc 551 ||||| ||||| |||||||||||||||||||||| Sbjct: 439 attgggtttttctatatggattttgatctcatctc 473
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full insert sequence Length = 1510 Score = 603 bits (304), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 140 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 199 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 200 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 259 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 260 tccgatgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggac 319 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| Sbjct: 320 gctgcgctgctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgag 379 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 aagatcgctgatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 439 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || ||||||||||||||||| |||||||| || ||||| || ||||||| |||| Sbjct: 440 aaatcgttgtatttcataagggttggagagaaggagaaggcactagaacagcttaaagtt 499 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||||||| Sbjct: 500 actgaaggaaaaactgtagctgttgggcaaaagatggaccttgttttccacactttacag 559 Query: 517 attggccttttccatatggattttgatctcatctc 551 ||||| ||||| |||||||||||||||||||||| Sbjct: 560 attgggtttttctatatggattttgatctcatctc 594
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full insert sequence Length = 1515 Score = 603 bits (304), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 145 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 204 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 205 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 264 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 265 tccgatgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggac 324 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| Sbjct: 325 gctgcgctgctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgag 384 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 aagatcgctgatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 444 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || ||||||||||||||||| |||||||| || ||||| || ||||||| |||| Sbjct: 445 aaatcgttgtatttcataagggttggagagaaggagaaggcactagaacagcttaaagtt 504 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||||||| Sbjct: 505 actgaaggaaaaactgtagctgttgggcaaaagatggaccttgttttccacactttacag 564 Query: 517 attggccttttccatatggattttgatctcatctc 551 ||||| ||||| |||||||||||||||||||||| Sbjct: 565 attgggtttttctatatggattttgatctcatctc 599
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome regulatory particle non-ATPase subunit7, complete cds Length = 1547 Score = 603 bits (304), Expect = e-169 Identities = 417/455 (91%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 103 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 162 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 163 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 222 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 223 tccgatgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggac 282 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| Sbjct: 283 gctgcgctgctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgag 342 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 aagatcgctgatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 402 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || ||||||||||||||||| |||||||| || ||||| || ||||||| |||| Sbjct: 403 aaatcgttgtatttcataagggttggagagaaggagaaggcactagaacagcttaaagtt 462 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||||||| Sbjct: 463 actgaaggaaaaactgtagctgttgggcaaaagatggaccttgttttccacactttacag 522 Query: 517 attggccttttccatatggattttgatctcatctc 551 ||||| ||||| |||||||||||||||||||||| Sbjct: 523 attgggtttttctatatggattttgatctcatctc 557
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence Length = 1443 Score = 523 bits (264), Expect = e-145 Identities = 407/455 (89%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 63 gaggacgggaagcagcagccgcacctggtactggcgcacaagctgttcctcctgtcgcac 122 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||||||||||||||||||||||| ||| |||| ||||| |||| ||||| ||| Sbjct: 123 cccgacgtcgacgacctcgccaaggtcgacctacgcgctgacgtgttcgcagcagtcaaa 182 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||||||||| || |||||||||||| ||||||| |||||||| ||||||| |||| Sbjct: 183 tccgatgacatggcagctctgtacgagtcgttggcggcggacggcgtactggagacggac 242 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 ||||||||||| || |||||||||| ||||||||| ||||||| ||| ||| |||||||| Sbjct: 243 gcggcgctgctggccgagatgcgcgccaggatcgacgaggagatccggaagctcgacgag 302 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 |||||||| ||||| || ||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 303 aagattgctgatgcagaggagaacttgggtgagagtgaagtgcgtgaggcccatctcgcc 362 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||| Sbjct: 363 aaatccttatatttcataagggttggggagaaggagaaagcactggagcagcttaaagtt 422 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 423 actgaaggaaaaactgtagctgttgggcaaaagatggaccttgttttctacacactacaa 482 Query: 517 attggccttttccatatggattttgatctcatctc 551 ||||| | ||| ||||||| |||||||||||||| Sbjct: 483 attggattgttctatatggactttgatctcatctc 517
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full insert sequence Length = 1371 Score = 418 bits (211), Expect = e-114 Identities = 378/434 (87%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 73 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 132 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 133 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 192 Query: 241 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 300 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 193 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 252 Query: 301 ggcaggatcgaggaggagacccgcaagttcgacgagaagattgcggatgctgaagagaat 360 | ||||||| |||||| ||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 253 gcgcggatcgacgaggaggtccgcaagctcgacgagaaaattgctgatgctgaagagaat 312 Query: 361 ttgggtgagagtgaagtgcgtgaagcccatctagccaaatccttatatttcataagggtt 420 ||||||||||| ||||||||||| |||||||| || |||||||| || ||||| |||||| Sbjct: 313 ttgggtgagagcgaagtgcgtgaggcccatctggcgaaatccttgtacttcatgagggtt 372 Query: 421 ggcgagaaggaaaaagcactggagcagcttanagttactgaaggcaagactgtagctgtc 480 || |||||||||||||||||||||||||||| |||||||||||| || ||||||||||| Sbjct: 373 ggagagaaggaaaaagcactggagcagcttaaagttactgaagggaaaactgtagctgtt 432 Query: 481 gggcagaagatggaccttgttttctacactttacagattggccttttccatatggatttt 540 || ||||| ||||| ||||| ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 433 ggccagaaaatggatcttgtgttctacactttgcaaataggccttttccacatggacttt 492 Query: 541 gatctcatctcaaa 554 |||||||||||||| Sbjct: 493 gatctcatctcaaa 506
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence Length = 1636 Score = 283 bits (143), Expect = 3e-73 Identities = 379/458 (82%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||| ||||||||| ||| ||| ||||||||||| |||||||| ||||| || || || Sbjct: 142 gaggaggggaagcaggagcggcacctggtgctggcccacaagctcttccttctatcccac 201 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||| || |||||| ||||||||| |||||||| ||| ||||||| | | |||||| Sbjct: 202 ccctccgttgatgacctctccaaggtcgccctccgcgccgaagtcctcgacaccgtgaaa 261 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| |||||| |||||||||| |||| || ||||||||| |||| Sbjct: 262 tccgatgatatggcgacgctgtttgagtcgctggtcgccgcgggtgtgctggagggggac 321 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||| || |||||||| || ||||| || ||||||| ||||||| | || ||| Sbjct: 322 gccgcgctgctggccgagatgcgtgggaggattgacgaggagatccgcaagctagatgag 381 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 || ||||| ||||| || ||||| ||||||||||| ||||| |||||||| ||||| ||| Sbjct: 382 aaaattgctgatgcggaggagaacttgggtgagagcgaagtccgtgaagcacatcttgcc 441 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || || || |||||||| || ||||||||||| || ||||| ||||||| ||| Sbjct: 442 aaatctttgtactttataagggtcggtgagaaggaaaaggccctggaacagcttaaagtc 501 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| || || |||||||| ||||| ||| ||||||| ||| Sbjct: 502 actgaaggaaaaactgtagctgttggccaaaagatggatcttgtgttccacactttgcag 561 Query: 517 attggccttttccatatggattttgatctcatctcaaa 554 ||||| ||||| | |||||||||||||| || ||||| Sbjct: 562 attggttttttctacatggattttgatctgatatcaaa 599
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence Length = 1631 Score = 283 bits (143), Expect = 3e-73 Identities = 379/458 (82%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||| ||||||||| ||| ||| ||||||||||| |||||||| ||||| || || || Sbjct: 157 gaggaggggaagcaggagcggcacctggtgctggcccacaagctcttccttctatcccac 216 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||| || |||||| ||||||||| |||||||| ||| ||||||| | | |||||| Sbjct: 217 ccctccgttgatgacctctccaaggtcgccctccgcgccgaagtcctcgacaccgtgaaa 276 Query: 217 tccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggac 276 |||||||| |||||| |||||| |||||||||| |||| || ||||||||| |||| Sbjct: 277 tccgatgatatggcgacgctgtttgagtcgctggtcgccgcgggtgtgctggagggggac 336 Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgag 336 || |||||||| || |||||||| || ||||| || ||||||| ||||||| | || ||| Sbjct: 337 gccgcgctgctggccgagatgcgtgggaggattgacgaggagatccgcaagctagatgag 396 Query: 337 aagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagcc 396 || ||||| ||||| || ||||| ||||||||||| ||||| |||||||| ||||| ||| Sbjct: 397 aaaattgctgatgcggaggagaacttgggtgagagcgaagtccgtgaagcacatcttgcc 456 Query: 397 aaatccttatatttcataagggttggcgagaaggaaaaagcactggagcagcttanagtt 456 ||||| || || || |||||||| || ||||||||||| || ||||| ||||||| ||| Sbjct: 457 aaatctttgtactttataagggtcggtgagaaggaaaaggccctggaacagcttaaagtc 516 Query: 457 actgaaggcaagactgtagctgtcgggcagaagatggaccttgttttctacactttacag 516 |||||||| || ||||||||||| || || |||||||| ||||| ||| ||||||| ||| Sbjct: 517 actgaaggaaaaactgtagctgttggccaaaagatggatcttgtgttccacactttgcag 576 Query: 517 attggccttttccatatggattttgatctcatctcaaa 554 ||||| ||||| | |||||||||||||| || ||||| Sbjct: 577 attggttttttctacatggattttgatctgatatcaaa 614
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 38714 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 38773 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 38774 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 38833 Query: 217 tccgatg 223 ||||||| Sbjct: 38834 tccgatg 38840 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 285 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 39045 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 39104 Query: 286 ctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 |||||||||||||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 39105 ctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgagaag 39158 Score = 145 bits (73), Expect = 2e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 436 gcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcagaagatggac 495 ||||| || ||||||| |||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 39913 gcactagaacagcttaaagttactgaaggaaaaactgtagctgttgggcaaaagatggac 39972 Query: 496 cttgttttctacactttacagattggccttttccatatggattttgatctcatctc 551 ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 39973 cttgttttccacactttacagattgggtttttctatatggattttgatctcatctc 40028 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 346 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcctta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 39740 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcgttg 39799 Query: 406 tatttcataagggttggcgagaagg 430 ||||||||||||||||| ||||||| Sbjct: 39800 tatttcataagggttggagagaagg 39824
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 105527 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 105586 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 105587 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 105646 Query: 217 tccgatg 223 ||||||| Sbjct: 105647 tccgatg 105653 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 285 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 105858 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 105917 Query: 286 ctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 |||||||||||||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 105918 ctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgagaag 105971 Score = 145 bits (73), Expect = 2e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 436 gcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcagaagatggac 495 ||||| || ||||||| |||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 106726 gcactagaacagcttaaagttactgaaggaaaaactgtagctgttgggcaaaagatggac 106785 Query: 496 cttgttttctacactttacagattggccttttccatatggattttgatctcatctc 551 ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 106786 cttgttttccacactttacagattgggtttttctatatggattttgatctcatctc 106841 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 346 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcctta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106553 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcgttg 106612 Query: 406 tatttcataagggttggcgagaagg 430 ||||||||||||||||| ||||||| Sbjct: 106613 tatttcataagggttggagagaagg 106637
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 24216302 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 24216361 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 24216362 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 24216421 Query: 217 tccgatg 223 ||||||| Sbjct: 24216422 tccgatg 24216428 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 285 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 24216633 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 24216692 Query: 286 ctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 |||||||||||||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 24216693 ctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgagaag 24216746 Score = 145 bits (73), Expect = 2e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 436 gcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcagaagatggac 495 ||||| || ||||||| |||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 24217501 gcactagaacagcttaaagttactgaaggaaaaactgtagctgttgggcaaaagatggac 24217560 Query: 496 cttgttttctacactttacagattggccttttccatatggattttgatctcatctc 551 ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 24217561 cttgttttccacactttacagattgggtttttctatatggattttgatctcatctc 24217616 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 346 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcctta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 24217328 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcgttg 24217387 Query: 406 tatttcataagggttggcgagaagg 430 ||||||||||||||||| ||||||| Sbjct: 24217388 tatttcataagggttggagagaagg 24217412
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 97 gaggaagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcag 156 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 10777 gaggaagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcac 10836 Query: 157 ccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaa 216 || ||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||| Sbjct: 10837 ccggacgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaa 10896 Query: 217 tccgatg 223 ||||||| Sbjct: 10897 tccgatg 10903 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 285 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 11091 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 11150 Query: 286 ctcgcggagatgcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 |||||||||||||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 11151 ctcgcggagatgcgcggcaggatcgaggaggagatccggaagcttgacgagaag 11204 Score = 145 bits (73), Expect = 2e-31 Identities = 105/116 (90%) Strand = Plus / Plus Query: 436 gcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcagaagatggac 495 ||||| || ||||||| |||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 11956 gcactagaacagcttaaagttactgaaggaaaaactgtagctgttgggcaaaagatggac 12015 Query: 496 cttgttttctacactttacagattggccttttccatatggattttgatctcatctc 551 ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 12016 cttgttttccacactttacagattgggtttttctatatggattttgatctcatctc 12071 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 346 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcctta 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 11786 gatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaatcgttg 11845 Query: 406 tatttcataagggttggcgagaagg 430 ||||||||||||||||| ||||||| Sbjct: 11846 tatttcataagggttggagagaagg 11870
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 172 bits (87), Expect = 8e-40 Identities = 186/219 (84%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 23480969 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 23481028 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 23481029 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 23481088 Query: 241 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 300 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 23481089 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 23481148 Query: 301 ggcaggatcgaggaggagacccgcaagttcgacgagaag 339 | ||||||| |||||| ||||||| ||||||||||| Sbjct: 23481149 gcgcggatcgacgaggaggtccgcaagctcgacgagaag 23481187 Score = 151 bits (76), Expect = 3e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 428 aggaaaaagcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcaga 487 |||||||||||||||||||||||| |||||||||||| || ||||||||||| || |||| Sbjct: 23483788 aggaaaaagcactggagcagcttaaagttactgaagggaaaactgtagctgttggccaga 23483847 Query: 488 agatggaccttgttttctacactttacagattggccttttccatatggattttgatctca 547 | ||||| ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 23483848 aaatggatcttgtgttctacactttgcaaataggccttttccacatggactttgatctca 23483907 Query: 548 tctcaaa 554 ||||||| Sbjct: 23483908 tctcaaa 23483914 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 23483616 attgctgatgctgaagagaatttgggtgagagcgaagtgcgtgaggcccatctggcgaaa 23483675 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || ||||| |||||||| ||||||| Sbjct: 23483676 tccttgtacttcatgagggttggagagaagg 23483706 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| || ||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 23452756 attgctgacgctgaagagaatttgggtgaggttgaagtgcgtgaggcccatatagccaaa 23452815 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || |||||||||||||| ||||||| Sbjct: 23452816 tccttgtacttcataagggttggggagaagg 23452846 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/223 (81%), Gaps = 4/223 (1%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 23410925 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 23410984 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 23410985 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 23411044 Query: 241 gagtcgctggcggccgacggcgtgctg---gagatggacg-cggcgctgctcgcggagat 296 ||||||||||| ||| ||||||||| || ||||| || ||||||||| ||||| Sbjct: 23411045 gagtcgctggccaccgcgggcgtgctgctcaagccggacgacgcagctgctcgccgagat 23411104 Query: 297 gcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 ||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 23411105 gcgcgcgcggatcgacgaggaggtccgcaagctcgacgagaag 23411147 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 339 gattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaa 398 |||||| || ||||||||||||||||||| || |||||||||||| ||||||||||| | Sbjct: 23472162 gattgctgacgctgaagagaatttgggtgggattgaagtgcgtgaggcccatctagctga 23472221 Query: 399 atccttatatttcataag 416 |||||| || |||||||| Sbjct: 23472222 atccttgtacttcataag 23472239 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctccgcgacgacgtcctcgccgc 209 |||||||||||||| ||||||||| Sbjct: 32437097 cctccgcgacgacgacctcgccgc 32437074
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 172 bits (87), Expect = 8e-40 Identities = 186/219 (84%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 46652 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 46711 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 46712 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 46771 Query: 241 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 300 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 46772 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 46831 Query: 301 ggcaggatcgaggaggagacccgcaagttcgacgagaag 339 | ||||||| |||||| ||||||| ||||||||||| Sbjct: 46832 gcgcggatcgacgaggaggtccgcaagctcgacgagaag 46870 Score = 151 bits (76), Expect = 3e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 428 aggaaaaagcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcaga 487 |||||||||||||||||||||||| |||||||||||| || ||||||||||| || |||| Sbjct: 49471 aggaaaaagcactggagcagcttaaagttactgaagggaaaactgtagctgttggccaga 49530 Query: 488 agatggaccttgttttctacactttacagattggccttttccatatggattttgatctca 547 | ||||| ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 49531 aaatggatcttgtgttctacactttgcaaataggccttttccacatggactttgatctca 49590 Query: 548 tctcaaa 554 ||||||| Sbjct: 49591 tctcaaa 49597 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 49299 attgctgatgctgaagagaatttgggtgagagcgaagtgcgtgaggcccatctggcgaaa 49358 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || ||||| |||||||| ||||||| Sbjct: 49359 tccttgtacttcatgagggttggagagaagg 49389 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| || ||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 18439 attgctgacgctgaagagaatttgggtgaggttgaagtgcgtgaggcccatatagccaaa 18498 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || |||||||||||||| ||||||| Sbjct: 18499 tccttgtacttcataagggttggggagaagg 18529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 339 gattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaa 398 |||||| || ||||||||||||||||||| || |||||||||||| ||||||||||| | Sbjct: 37845 gattgctgacgctgaagagaatttgggtgggattgaagtgcgtgaggcccatctagctga 37904 Query: 399 atccttatatttcataag 416 |||||| || |||||||| Sbjct: 37905 atccttgtacttcataag 37922
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 172 bits (87), Expect = 8e-40 Identities = 186/219 (84%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 99644 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 99703 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 99704 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 99763 Query: 241 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 300 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 99764 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 99823 Query: 301 ggcaggatcgaggaggagacccgcaagttcgacgagaag 339 | ||||||| |||||| ||||||| ||||||||||| Sbjct: 99824 gcgcggatcgacgaggaggtccgcaagctcgacgagaag 99862 Score = 151 bits (76), Expect = 3e-33 Identities = 114/127 (89%) Strand = Plus / Plus Query: 428 aggaaaaagcactggagcagcttanagttactgaaggcaagactgtagctgtcgggcaga 487 |||||||||||||||||||||||| |||||||||||| || ||||||||||| || |||| Sbjct: 102463 aggaaaaagcactggagcagcttaaagttactgaagggaaaactgtagctgttggccaga 102522 Query: 488 agatggaccttgttttctacactttacagattggccttttccatatggattttgatctca 547 | ||||| ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 102523 aaatggatcttgtgttctacactttgcaaataggccttttccacatggactttgatctca 102582 Query: 548 tctcaaa 554 ||||||| Sbjct: 102583 tctcaaa 102589 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 102291 attgctgatgctgaagagaatttgggtgagagcgaagtgcgtgaggcccatctggcgaaa 102350 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || ||||| |||||||| ||||||| Sbjct: 102351 tccttgtacttcatgagggttggagagaagg 102381 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| || ||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 71431 attgctgacgctgaagagaatttgggtgaggttgaagtgcgtgaggcccatatagccaaa 71490 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || |||||||||||||| ||||||| Sbjct: 71491 tccttgtacttcataagggttggggagaagg 71521 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/223 (81%), Gaps = 4/223 (1%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 29600 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 29659 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 29660 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 29719 Query: 241 gagtcgctggcggccgacggcgtgctg---gagatggacg-cggcgctgctcgcggagat 296 ||||||||||| ||| ||||||||| || ||||| || ||||||||| ||||| Sbjct: 29720 gagtcgctggccaccgcgggcgtgctgctcaagccggacgacgcagctgctcgccgagat 29779 Query: 297 gcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 ||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 29780 gcgcgcgcggatcgacgaggaggtccgcaagctcgacgagaag 29822 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 339 gattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaa 398 |||||| || ||||||||||||||||||| || |||||||||||| ||||||||||| | Sbjct: 90837 gattgctgacgctgaagagaatttgggtgggattgaagtgcgtgaggcccatctagctga 90896 Query: 399 atccttatatttcataag 416 |||||| || |||||||| Sbjct: 90897 atccttgtacttcataag 90914
>dbj|AK068044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132L02, full insert sequence Length = 1103 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 305 ggatcgaggaggagacccgcaagttcgacgagaagattgcggatgctgaagagaatttgg 364 ||||||| |||||| ||||||| |||||| ||||||||| || |||||||||||||||| Sbjct: 278 ggatcgacgaggaggtccgcaagctcgacgggaagattgctgacgctgaagagaatttgg 337 Query: 365 gtgagagtgaagtgcgtgaagcccatctagccaaatccttatatttcataag 416 ||| || |||||||||||| ||||||||||| ||||||| || |||||||| Sbjct: 338 gtgggattgaagtgcgtgaggcccatctagctgaatccttgtacttcataag 389
>dbj|AK065211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F23, full insert sequence Length = 3196 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 340 attgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatctagccaaa 399 ||||| || ||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 183 attgctgacgctgaagagaatttgggtgaggttgaagtgcgtgaggcccatatagccaaa 242 Query: 400 tccttatatttcataagggttggcgagaagg 430 ||||| || |||||||||||||| ||||||| Sbjct: 243 tccttgtacttcataagggttggggagaagg 273
>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0038P01 Length = 148506 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/223 (81%), Gaps = 4/223 (1%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 124000 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 124059 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 124060 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 124119 Query: 241 gagtcgctggcggccgacggcgtgctg---gagatggacg-cggcgctgctcgcggagat 296 ||||||||||| ||| ||||||||| || ||||| || ||||||||| ||||| Sbjct: 124120 gagtcgctggccaccgcgggcgtgctgctcaagccggacgacgcagctgctcgccgagat 124179 Query: 297 gcgcggcaggatcgaggaggagacccgcaagttcgacgagaag 339 ||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 124180 gcgcgcgcggatcgacgaggaggtccgcaagctcgacgagaag 124222
>ref|XM_466567.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/222 (81%), Gaps = 4/222 (1%) Strand = Plus / Plus Query: 121 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 180 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 1984 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 2043 Query: 181 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 240 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 2044 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 2103 Query: 241 gagtcgctggcggccgacggcgtgctg---gagatggacg-cggcgctgctcgcggagat 296 ||||||||||| ||| ||||||||| || ||||| || ||||||||| ||||| Sbjct: 2104 gagtcgctggccaccgcgggcgtgctgctcaagccggacgacgcagctgctcgccgagat 2163 Query: 297 gcgcggcaggatcgaggaggagacccgcaagttcgacgagaa 338 ||||| ||||||| |||||| ||||||| |||||||||| Sbjct: 2164 gcgcgcgcggatcgacgaggaggtccgcaagctcgacgagaa 2205
>ref|NM_189491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 89.7 bits (45), Expect = 9e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 105 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 164 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 366 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 425 Query: 165 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 224 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 426 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 485 Query: 225 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 284 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 486 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 545 Query: 285 gctcgcggagatgcgcg 301 ||||| |||||||||| Sbjct: 546 gctcgtcgagatgcgcg 562
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 105 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 164 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 43069764 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 43069823 Query: 165 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 224 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 43069824 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 43069883 Query: 225 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 284 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 43069884 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 43069943 Query: 285 gctcgcggagatgcgcg 301 ||||| |||||||||| Sbjct: 43069944 gctcgtcgagatgcgcg 43069960 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ctccgcgacgacgtcctcgcc 207 ||||||||||||||||||||| Sbjct: 35646719 ctccgcgacgacgtcctcgcc 35646739 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gtcggcctccgcgacgacgtcctc 204 ||||||||||||| |||||||||| Sbjct: 40133092 gtcggcctccgcggcgacgtcctc 40133069 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ccgcgacgacgtcctcgccg 208 |||||||||||||||||||| Sbjct: 3958527 ccgcgacgacgtcctcgccg 3958546
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 89.7 bits (45), Expect = 9e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 105 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 164 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 66793 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 66852 Query: 165 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 224 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 66853 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 66912 Query: 225 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 284 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 66913 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 66972 Query: 285 gctcgcggagatgcgcg 301 ||||| |||||||||| Sbjct: 66973 gctcgtcgagatgcgcg 66989
>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.1 mRNA, complete cds Length = 1595 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 368 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 427 Query: 389 atct 392 |||| Sbjct: 428 atct 431
>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.2 mRNA, complete cds Length = 1462 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 368 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 427 Query: 389 atct 392 |||| Sbjct: 428 atct 431
>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA, complete cds Length = 1421 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 278 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 337 Query: 389 atct 392 |||| Sbjct: 338 atct 341
>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence Length = 1161 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 242 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 301 Query: 389 atct 392 |||| Sbjct: 302 atct 305
>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1443 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 295 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 354 Query: 389 atct 392 |||| Sbjct: 355 atct 358
>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1446 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 245 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 304 Query: 389 atct 392 |||| Sbjct: 305 atct 308
>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820; F6I7.30) mRNA, complete cds Length = 1595 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 368 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 427 Query: 389 atct 392 |||| Sbjct: 428 atct 431
>emb|BX829044.1|CNS0A4HJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL63ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 244 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 303 Query: 389 atct 392 |||| Sbjct: 304 atct 307
>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 265 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 324 Query: 389 atct 392 |||| Sbjct: 325 atct 328
>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence Length = 1482 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagccc 388 |||||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct: 348 tcgacgagaagattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctc 407 Query: 389 atct 392 |||| Sbjct: 408 atct 411
>ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 63.9 bits (32), Expect = 5e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 154 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 213 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 467 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 408 Query: 214 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 273 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 407 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 348 Query: 274 gacgcggcgctgctcgcggagatgcgcg 301 |||| ||||||||| | |||||||||| Sbjct: 347 gacgacgcgctgctcaccgagatgcgcg 320
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 154 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 213 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 24130452 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 24130393 Query: 214 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 273 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 24130392 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 24130333 Query: 274 gacgcggcgctgctcgcggagatgcgcg 301 |||| ||||||||| | |||||||||| Sbjct: 24130332 gacgacgcgctgctcaccgagatgcgcg 24130305
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 63.9 bits (32), Expect = 5e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 154 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 213 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 83938 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 83879 Query: 214 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 273 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 83878 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 83819 Query: 274 gacgcggcgctgctcgcggagatgcgcg 301 |||| ||||||||| | |||||||||| Sbjct: 83818 gacgacgcgctgctcaccgagatgcgcg 83791
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 339 gattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatct 392 |||||| ||||| ||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 66210 gattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctcatct 66157
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 339 gattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagcccatct 392 |||||| ||||| ||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 36786 gattgcagatgcagaagaaaatttgggtgaaagtgaagttcgtgaagctcatct 36733
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09, complete sequence Length = 171861 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 246 gctggcggccgacggcgtgctggagatggacg 277 ||||||||| ||||||||||||| |||||||| Sbjct: 113122 gctggcggcggacggcgtgctggtgatggacg 113091
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence Length = 36615 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 273 ggacgcggcgctgctcgcggagatgcgcggca 304 |||||||||| ||||||||||| ||||||||| Sbjct: 916 ggacgcggcggtgctcgcggagctgcgcggca 947
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 246 gctggcggccgacggcgtgctggagatggacg 277 ||||||||| ||||||||||||| |||||||| Sbjct: 15703441 gctggcggcggacggcgtgctggtgatggacg 15703410 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 164 tcgacgacctcgccaaggtcggcctcc 190 |||||||||||||||||| |||||||| Sbjct: 18930410 tcgacgacctcgccaaggacggcctcc 18930384
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 246 gctggcggccgacggcgtgctggagatggacg 277 ||||||||| ||||||||||||| |||||||| Sbjct: 15790818 gctggcggcggacggcgtgctggtgatggacg 15790787 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 164 tcgacgacctcgccaaggtcggcctcc 190 |||||||||||||||||| |||||||| Sbjct: 19089232 tcgacgacctcgccaaggacggcctcc 19089206
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 164 tcgacgacctcgccaaggtcggcctcc 190 |||||||||||||||||| |||||||| Sbjct: 194426 tcgacgacctcgccaaggacggcctcc 194400
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 164 tcgacgacctcgccaaggtcggcctcc 190 |||||||||||||||||| |||||||| Sbjct: 33781 tcgacgacctcgccaaggacggcctcc 33755
>gb|AY022264.1| Oryza sativa microsatellite MRG4589 containing (TG)X33, closest to marker S10585, genomic sequence Length = 266 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgt 263 |||||| | |||||||||||||||| ||||| |||||| Sbjct: 229 atggcgtctctgtacgagtcgctgggggccggcggcgt 266 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 tcctcgccgcagtgaaatccgatg 223 ||||||||||||| |||||||||| Sbjct: 1 tcctcgccgcagtcaaatccgatg 24
>gb|AY019832.1| Oryza sativa microsatellite MRG2157 containing (CA)X33, closest to marker S10585, genomic sequence Length = 266 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 226 atggcggcgctgtacgagtcgctggcggccgacggcgt 263 |||||| | |||||||||||||||| ||||| |||||| Sbjct: 38 atggcgtctctgtacgagtcgctgggggccggcggcgt 1 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 tcctcgccgcagtgaaatccgatg 223 ||||||||||||| |||||||||| Sbjct: 266 tcctcgccgcagtcaaatccgatg 243
>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence Length = 1278 Score = 44.1 bits (22), Expect = 0.48 Identities = 49/58 (84%) Strand = Plus / Plus Query: 329 tcgacgagaagattgcggatgctgaagagaatttgggtgagagtgaagtgcgtgaagc 386 |||| ||||||||||| ||||| ||||| ||| | ||||| |||||||| || ||||| Sbjct: 202 tcgatgagaagattgctgatgcagaagaaaatcttggtgaaagtgaagttcgagaagc 259
>gb|AC146613.3| Mus musculus BAC clone RP23-36P1 from chromosome 18, complete sequence Length = 197939 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 gctctctcttcccccatctctt 33 |||||||||||||||||||||| Sbjct: 19610 gctctctcttcccccatctctt 19589
>gb|AC131736.2| Mus musculus BAC clone RP23-104E2 from 18, complete sequence Length = 180201 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 gctctctcttcccccatctctt 33 |||||||||||||||||||||| Sbjct: 151461 gctctctcttcccccatctctt 151440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 gcagcagccgcagctggtgctg 129 |||||||||||||||||||||| Sbjct: 20713297 gcagcagccgcagctggtgctg 20713276
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 gcagcagccgcagctggtgctg 129 |||||||||||||||||||||| Sbjct: 135704 gcagcagccgcagctggtgctg 135683
>ref|NM_190458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2334 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ctccgcgacgacgtcctcgcc 207 ||||||||||||||||||||| Sbjct: 343 ctccgcgacgacgtcctcgcc 363
>gb|AY580296.1| Priapulus caudatus fructose-bisphosphate aldolase mRNA, partial cds Length = 588 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ctccgcgacgacgtcctcgcc 207 ||||||||||||||||||||| Sbjct: 117 ctccgcgacgacgtcctcgcc 97
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 cggccgacggcgtgctggagatggacgcg 279 |||||||||||||||||| ||| |||||| Sbjct: 292966 cggccgacggcgtgctggtgatcgacgcg 292994
>gb|AC087063.20| Mus musculus strain C57BL/6J clone rp23-20o47 map 7, complete sequence Length = 241381 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ctctgctctctcttcccccatctct 32 |||| |||||||||||||||||||| Sbjct: 106935 ctcttctctctcttcccccatctct 106959
>gb|AC118543.30| Mus musculus strain C57BL/6J clone rp23-254b17 map 17, complete sequence Length = 241570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 gcagaagatggaccttgtttt 503 ||||||||||||||||||||| Sbjct: 67096 gcagaagatggaccttgtttt 67076
>gb|AC162857.5| Mus musculus chromosome 15, clone RP23-333C11, complete sequence Length = 224913 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctctt 33 ||||||||||||||||||||| Sbjct: 150039 ctctctcttcccccatctctt 150059
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 3123313 acgacctcgccaaggtcggcc 3123293
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 991 acgacctcgccaaggtcggcc 1011
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cgtgctggagatggacgcggc 281 ||||||||||||||||||||| Sbjct: 5409982 cgtgctggagatggacgcggc 5409962
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 tccgcgacgacgtcctcgccg 208 ||||||||||||||||||||| Sbjct: 3291309 tccgcgacgacgtcctcgccg 3291289
>gb|AC102408.10| Mus musculus chromosome 15, clone RP24-351C14, complete sequence Length = 190773 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctctt 33 ||||||||||||||||||||| Sbjct: 135212 ctctctcttcccccatctctt 135192
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ctccgcgacgacgtcctcgcc 207 ||||||||||||||||||||| Sbjct: 50056 ctccgcgacgacgtcctcgcc 50076
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cgtgctggagatggacgcggc 281 ||||||||||||||||||||| Sbjct: 8908611 cgtgctggagatggacgcggc 8908591
>dbj|AK068489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B12, full insert sequence Length = 2694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ctccgcgacgacgtcctcgcc 207 ||||||||||||||||||||| Sbjct: 276 ctccgcgacgacgtcctcgcc 296
>emb|AM181565.1| Microbacterium arborescens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20754 Length = 1080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 458 acgacctcgccaaggtcggcc 478
>emb|AM181564.1| Microbacterium aerolatum partial rpoB gene for RNA polymerase subunit B, type strain DSM 14217 Length = 1172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 465 acgacctcgccaaggtcggcc 485
>emb|AM181580.1| Microbacterium laevaniformans partial rpoB gene for RNA polymerase subunit B, type strain DSM 20140 Length = 1086 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 462 acgacctcgccaaggtcggcc 482
>emb|AM181574.1| Microbacterium imperiale partial rpoB gene for RNA polymerase subunit B, type strain DSM 20530 Length = 1085 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 461 acgacctcgccaaggtcggcc 481
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 gaagcagcagccgcagctggtgctg 129 |||||| |||||||||||||||||| Sbjct: 97932 gaagcaccagccgcagctggtgctg 97956
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gcagccgcagctggtgctggc 131 ||||||||||||||||||||| Sbjct: 4431749 gcagccgcagctggtgctggc 4431729
>gb|AY623104.1| Nonomuraea sp. ATCC 39727 rifampicin-resistant RNA polymerase beta chain (rpoB) gene, rpoB-R allele, complete cds Length = 3450 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 acgacctcgccaaggtcggcc 187 ||||||||||||||||||||| Sbjct: 866 acgacctcgccaaggtcggcc 886
>gb|AC158530.2| Mus musculus BAC clone RP23-255H12 from chromosome 17, complete sequence Length = 154287 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 gcagaagatggaccttgtttt 503 ||||||||||||||||||||| Sbjct: 99431 gcagaagatggaccttgtttt 99411
>emb|AL669910.15| Mouse DNA sequence from clone RP23-119H5 on chromosome 2, complete sequence Length = 158275 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtg 126 |||||||||||||| |||||||||| Sbjct: 6177 agggaagcagcagcagcagctggtg 6153
>ref|XM_550315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ccgcgacgacgtcctcgccg 208 |||||||||||||||||||| Sbjct: 906 ccgcgacgacgtcctcgccg 925
>ref|XM_467988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 869 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctccgcgacgacgtcctcgccgc 209 |||||||||||||| ||||||||| Sbjct: 112 cctccgcgacgacgacctcgccgc 89
>ref|XM_463173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gcagccagacgtcgacgacctcgc 176 |||||| ||||||||||||||||| Sbjct: 284 gcagccggacgtcgacgacctcgc 307
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 277 gcggcgctgctcgcggagatgcgcggcaggatcgag 312 |||||||||||||||| || ||||| | |||||||| Sbjct: 3126016 gcggcgctgctcgcggtgacgcgcgcccggatcgag 3125981
>ref|XM_463623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gtcggcctccgcgacgacgtcctc 204 ||||||||||||| |||||||||| Sbjct: 901 gtcggcctccgcggcgacgtcctc 924
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 121766 ctctctcttcccccatctct 121785 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 121702 ctctctcttcccccatctct 121721
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 10152 ctctctcttcccccatctct 10171 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 10088 ctctctcttcccccatctct 10107
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tctcctctgctctctcttccccca 27 |||||||| ||||||||||||||| Sbjct: 113284 tctcctctcctctctcttccccca 113261
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 acgcggcgctgctcgcggag 294 |||||||||||||||||||| Sbjct: 2449644 acgcggcgctgctcgcggag 2449625
>gb|BC079702.1| Xenopus laevis MGC81785 protein, mRNA (cDNA clone MGC:81785 IMAGE:6866603), complete cds Length = 4439 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctttctcctctgctctctct 20 |||||||||||||||||||| Sbjct: 110 ctttctcctctgctctctct 91
>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence Length = 195286 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 191030 ctctctcttcccccatctct 191011
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cgctggcggccgacggcgtgctgg 268 |||||||||||| ||||||||||| Sbjct: 1188387 cgctggcggccggcggcgtgctgg 1188410
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 ccgcgacgacgtcctcgccg 208 |||||||||||||||||||| Sbjct: 1992136 ccgcgacgacgtcctcgccg 1992117
>ref|XM_593416.2| PREDICTED: Bos taurus similar to stromal antigen 3 (LOC515399), partial mRNA Length = 3164 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gtgctggagatggacgcggc 281 |||||||||||||||||||| Sbjct: 1786 gtgctggagatggacgcggc 1805
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 acgcggcgctgctcgcggag 294 |||||||||||||||||||| Sbjct: 3734965 acgcggcgctgctcgcggag 3734984
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 479149 agggaagcagcagctgcagcaggtgctg 479122
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 agcagccgcagctggtgctggcgc 133 ||||||||| |||||||||||||| Sbjct: 4778097 agcagccgctgctggtgctggcgc 4778120
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gcagccagacgtcgacgacctcgc 176 |||||| ||||||||||||||||| Sbjct: 22935273 gcagccggacgtcgacgacctcgc 22935296
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 144013 ctctctcttcccccatctct 144032
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tctcctctgctctctcttcc 23 |||||||||||||||||||| Sbjct: 103313 tctcctctgctctctcttcc 103332
>emb|CR730818.2|CNS0GQUF Tetraodon nigroviridis full-length cDNA Length = 1083 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 298 agcagcagcagcagctggtgctgg 321
>emb|CR730314.2|CNS0GQGF Tetraodon nigroviridis full-length cDNA Length = 1038 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 277 agcagcagcagcagctggtgctgg 300
>emb|CR727137.2|CNS0GO07 Tetraodon nigroviridis full-length cDNA Length = 1104 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 321 agcagcagcagcagctggtgctgg 344
>emb|CR726105.2|CNS0GN7J Tetraodon nigroviridis full-length cDNA Length = 1037 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 267 agcagcagcagcagctggtgctgg 290
>emb|CR724518.2|CNS0GLZG Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 322 agcagcagcagcagctggtgctgg 345
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gcagccagacgtcgacgacctcgc 176 |||||| ||||||||||||||||| Sbjct: 137803 gcagccggacgtcgacgacctcgc 137826
>emb|CR700026.2|CNS0G33A Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 268 agcagcagcagcagctggtgctgg 291
>emb|CR692243.2|CNS0FX33 Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 268 agcagcagcagcagctggtgctgg 291
>emb|CR677350.2|CNS0FLLU Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 313 agcagcagcagcagctggtgctgg 336
>emb|CR675886.2|CNS0FKHG Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 291 agcagcagcagcagctggtgctgg 314
>emb|CR670220.2|CNS0FG42 Tetraodon nigroviridis full-length cDNA Length = 1093 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 311 agcagcagcagcagctggtgctgg 334
>emb|CR666358.2|CNS0FD4S Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 agcagcagccgcagctggtgctgg 130 ||||||||| |||||||||||||| Sbjct: 309 agcagcagcagcagctggtgctgg 332
>gb|AC110920.10| Mus musculus chromosome 12, clone RP23-328I23, complete sequence Length = 223308 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 220055 ctctctcttcccccatctct 220036
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgacgacgtcctcgccgcag 211 |||||||||||||||||||| Sbjct: 3402909 cgacgacgtcctcgccgcag 3402890
>gb|AC138435.2| Artibeus jamaicensis clone 21H16, complete sequence Length = 95559 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 33345 ctctctcttcccccatctct 33364
>gb|AC118477.14| Mus musculus chromosome 1, clone RP24-178B14, complete sequence Length = 191518 Score = 40.1 bits (20), Expect = 7.5 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 1 ctttctcctctgctctctcttcccccatctct 32 ||||||||||| |||||||||||||| ||||| Sbjct: 15226 ctttctcctct-ctctctcttcccccttctct 15256
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cgctggcggccgacggcgtgctgg 268 |||||||||||| ||||||||||| Sbjct: 154554 cgctggcggccggcggcgtgctgg 154577
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 282 gctgctcgcggagatgcgcggcaggatcgaggagga 317 |||| |||| |||||||||||| ||||| ||||||| Sbjct: 349447 gctggtcgccgagatgcgcggccggatcaaggagga 349412
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 acgcggcgctgctcgcggag 294 |||||||||||||||||||| Sbjct: 3475284 acgcggcgctgctcgcggag 3475303
>emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 12/17 Length = 348505 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gtgctggagatggacgcggcgctg 285 |||||||||||||| ||||||||| Sbjct: 9031 gtgctggagatggaggcggcgctg 9008
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cgctggcggccgacggcgtgctgg 268 |||||||||||| ||||||||||| Sbjct: 201789 cgctggcggccggcggcgtgctgg 201812
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 cgcagccagacgtcgacgacctcg 175 ||||||||| |||||||||||||| Sbjct: 273575 cgcagccagccgtcgacgacctcg 273552 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgtcgacgacctcgccaagg 181 |||||||||||||||||||| Sbjct: 270855 cgtcgacgacctcgccaagg 270836
>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence Length = 229633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 216304 ctctctcttcccccatctct 216323
>gb|AC148590.12| Amia calva clone uoaca-5d5-1, complete sequence Length = 41968 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttctcctctgctctctcttccccc 26 ||||||||||||||||||| |||| Sbjct: 6011 ttctcctctgctctctcttgcccc 5988
>gb|AE012498.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 406 of 460 of the complete genome Length = 12898 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gccgacggcgtgctggagat 272 |||||||||||||||||||| Sbjct: 7724 gccgacggcgtgctggagat 7743
>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence Length = 178395 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 aagagaatttgggtgagagtgaag 376 ||||||| |||||||||||||||| Sbjct: 84848 aagagaagttgggtgagagtgaag 84825
>gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, complete sequence Length = 194855 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttttccatatggattttgat 543 |||||||||||||||||||| Sbjct: 73838 ttttccatatggattttgat 73819
>gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, complete sequence Length = 151265 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gaaaaagcactggagcagct 449 |||||||||||||||||||| Sbjct: 28426 gaaaaagcactggagcagct 28445
>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence Length = 144356 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tctcctctgctctctcttcc 23 |||||||||||||||||||| Sbjct: 2480 tctcctctgctctctcttcc 2499
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 acgcggcgctgctcgcggag 294 |||||||||||||||||||| Sbjct: 2155116 acgcggcgctgctcgcggag 2155135
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 522595 ctctctcttcccccatctct 522614
>gb|AF165627.1|AF165627 Lama glama tumor necrosis factor-alpha gene, partial sequence Length = 486 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 121 ctctctcttcccccatctct 102
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gccgacggcgtgctggagat 272 |||||||||||||||||||| Sbjct: 4548245 gccgacggcgtgctggagat 4548264
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 tcggcctccgcgacgacgtcctcg 205 |||||||| ||||||||||||||| Sbjct: 2460419 tcggcctctgcgacgacgtcctcg 2460396
>emb|CR378098.1| Pinus pinaster SSR, clone PPB2E08 Length = 400 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 185 ctctctcttcccccatctct 166
>emb|CR378038.1| Pinus pinaster SSR, clone PPB1F06 Length = 563 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 459 ctctctcttcccccatctct 478
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tctcctctgctctctcttccccca 27 |||||||| ||||||||||||||| Sbjct: 21767264 tctcctctcctctctcttccccca 21767241 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 249909 ctctctcttcccccatctct 249928
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 16797656 ctctctcttcccccatctct 16797675 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 16797592 ctctctcttcccccatctct 16797611
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gcagccagacgtcgacgacctcgc 176 |||||| ||||||||||||||||| Sbjct: 22928301 gcagccggacgtcgacgacctcgc 22928324
>gb|AC022841.4|AC022841 Homo sapiens chromosome 15, clone RP11-213C21, complete sequence Length = 157657 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 aagagaatttgggtgagagtgaag 376 ||||||| |||||||||||||||| Sbjct: 128800 aagagaagttgggtgagagtgaag 128823
>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence Length = 128950 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tcctctgctctctcttcccc 25 |||||||||||||||||||| Sbjct: 57988 tcctctgctctctcttcccc 58007
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 44935 ctctctcttcccccatctct 44954
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 163367 ctctctcttcccccatctct 163386
>gb|AC092824.13| Homo sapiens 12 BAC RP11-158N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40182 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tttctcctctgctctctctt 21 |||||||||||||||||||| Sbjct: 32861 tttctcctctgctctctctt 32880
>gb|AC110926.5| Homo sapiens BAC clone RP11-313N8 from 2, complete sequence Length = 193648 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcagccgcagctggtgctgg 130 |||||||||||||||||||| Sbjct: 81266 gcagccgcagctggtgctgg 81247
>gb|AC092207.4| Homo sapiens BAC clone RP11-321M15 from 2, complete sequence Length = 89871 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gcagccgcagctggtgctgg 130 |||||||||||||||||||| Sbjct: 49454 gcagccgcagctggtgctgg 49435
>gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, complete sequence Length = 207818 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 149190 ctctctcttcccccatctct 149171
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gtcggcctccgcgacgacgtcctc 204 ||||||||||||| |||||||||| Sbjct: 76176 gtcggcctccgcggcgacgtcctc 76153
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ccgcgacgacgtcctcgccg 208 |||||||||||||||||||| Sbjct: 80431 ccgcgacgacgtcctcgccg 80450
>gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q28, complete sequence Length = 187411 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gctctctcttcccccatctc 31 |||||||||||||||||||| Sbjct: 137448 gctctctcttcccccatctc 137467
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 gcagcagccgcagctggtgctggc 131 |||||||||| ||||||||||||| Sbjct: 231732 gcagcagccggagctggtgctggc 231755
>gb|AC091248.6| Mus musculus Strain C57BL6/J chromosome 1 BAC, RP23-93D12, complete sequence Length = 220602 Score = 40.1 bits (20), Expect = 7.5 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 1 ctttctcctctgctctctcttcccccatctct 32 ||||||||||| |||||||||||||| ||||| Sbjct: 184727 ctttctcctct-ctctctcttcccccttctct 184757
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 476791 agggaagcagcagctgcagcaggtgctg 476764
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 145407 ctctctcttcccccatctct 145426
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctccgcgacgacgtcctcgccgc 209 |||||||||||||| ||||||||| Sbjct: 98610 cctccgcgacgacgacctcgccgc 98587
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctccgcgacgacgtcctcgccgc 209 |||||||||||||| ||||||||| Sbjct: 40490 cctccgcgacgacgacctcgccgc 40467
>dbj|AK107987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F02, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctccgcgacgacgtcctcgccgc 209 |||||||||||||| ||||||||| Sbjct: 112 cctccgcgacgacgacctcgccgc 89
>dbj|AK066552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K05, full insert sequence Length = 1419 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gtcggcctccgcgacgacgtcctc 204 ||||||||||||| |||||||||| Sbjct: 1017 gtcggcctccgcggcgacgtcctc 1040
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 acgcggcgctgctcgcggag 294 |||||||||||||||||||| Sbjct: 1387645 acgcggcgctgctcgcggag 1387626
>gb|AY884127.1| Chlamydia trachomatis strain 404 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884126.1| Chlamydia trachomatis strain TW-396 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884125.1| Chlamydia trachomatis strain 434 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884124.1| Chlamydia trachomatis strain 440 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884123.1| Chlamydia trachomatis strain UW-31 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884122.1| Chlamydia trachomatis strain UW-92 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884121.1| Chlamydia trachomatis strain UW-36 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884119.1| Chlamydia trachomatis strain UW-12 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884118.1| Chlamydia trachomatis strain UW-4 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884117.1| Chlamydia trachomatis strain UW-57 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884116.1| Chlamydia trachomatis strain IC-Cal3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884115.1| Chlamydia trachomatis strain Bour polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884114.1| Chlamydia trachomatis strain TW-448 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884113.1| Chlamydia trachomatis strain UW-3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884112.1| Chlamydia trachomatis strain TW-3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884111.1| Chlamydia trachomatis strain Apache-2 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884110.1| Chlamydia trachomatis strain TW-5 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884109.1| Chlamydia trachomatis strain HAR-13 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 agggaagcagcagccgcagctggtgctg 129 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete sequence Length = 203805 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 168905 ctctctcttcccccatctct 168924
>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctctctcttcccccatctct 32 |||||||||||||||||||| Sbjct: 134472 ctctctcttcccccatctct 134491 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,511,160 Number of Sequences: 3902068 Number of extensions: 4511160 Number of successful extensions: 106808 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 103192 Number of HSP's gapped (non-prelim): 3616 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
