ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38d04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Plus Query: 144 caagaatggggagcaccgacgagactggaactccctatggcgagtacacctatgctgagc 203 |||||||||||||| | || ||| |||||| | ||||||||||||||||||||||| | Sbjct: 32 caagaatggggagctcggagaagaacggaactgcttatggcgagtacacctatgctgaac 91 Query: 204 tggagagggagttgtactggccatccgagaagctgagaatctcggttactggagctggtg 263 ||||||||||| ||||||||| || ||||||||||| || ||| | || |||||||||| Sbjct: 92 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 151 Query: 264 gtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcattgcct 323 |||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| |||| Sbjct: 152 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 211 Query: 324 ctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccaccttg 383 | |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 212 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 271 Query: 384 ctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtcttca 443 |||||| |||||||||||||||||||| |||||||||| | |||||||||||| |||| Sbjct: 272 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 331 Query: 444 atcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgt 503 | ||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 332 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 391 Query: 504 acaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaaga 563 |||| |||||||||||||||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 392 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 451 Query: 564 ggttcttctatgcctcgagcgcatgcatctaccctgaa 601 |||||||||||||||| || |||||||| ||||||||| Sbjct: 452 ggttcttctatgcctcaagtgcatgcatttaccctgaa 489
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Plus Query: 144 caagaatggggagcaccgacgagactggaactccctatggcgagtacacctatgctgagc 203 |||||||||||||| | || ||| |||||| | ||||||||||||||||||||||| | Sbjct: 117 caagaatggggagctcggagaagaacggaactgcttatggcgagtacacctatgctgaac 176 Query: 204 tggagagggagttgtactggccatccgagaagctgagaatctcggttactggagctggtg 263 ||||||||||| ||||||||| || ||||||||||| || ||| | || |||||||||| Sbjct: 177 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 236 Query: 264 gtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcattgcct 323 |||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| |||| Sbjct: 237 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 296 Query: 324 ctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccaccttg 383 | |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 297 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 356 Query: 384 ctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtcttca 443 |||||| |||||||||||||||||||| |||||||||| | |||||||||||| |||| Sbjct: 357 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 416 Query: 444 atcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgt 503 | ||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 417 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 476 Query: 504 acaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaaga 563 |||| |||||||||||||||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 477 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 536 Query: 564 ggttcttctatgcctcgagcgcatgcatctaccctgaa 601 |||||||||||||||| || |||||||| ||||||||| Sbjct: 537 ggttcttctatgcctcaagtgcatgcatttaccctgaa 574
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Plus Query: 144 caagaatggggagcaccgacgagactggaactccctatggcgagtacacctatgctgagc 203 |||||||||||||| | || ||| |||||| | ||||||||||||||||||||||| | Sbjct: 122 caagaatggggagctcggagaagaacggaactgcttatggcgagtacacctatgctgaac 181 Query: 204 tggagagggagttgtactggccatccgagaagctgagaatctcggttactggagctggtg 263 ||||||||||| ||||||||| || ||||||||||| || ||| | || |||||||||| Sbjct: 182 tggagagggagcagtactggccgtctgagaagctgaggatatcgatcaccggagctggtg 241 Query: 264 gtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcattgcct 323 |||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| |||| Sbjct: 242 gtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacatcatcgcct 301 Query: 324 ctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccaccttg 383 | |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 302 ccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagttccaccttg 361 Query: 384 ctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtcttca 443 |||||| |||||||||||||||||||| |||||||||| | |||||||||||| |||| Sbjct: 362 ttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgaccatgtgttca 421 Query: 444 atcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgt 503 | ||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 422 accttgccgctgatatgggtggtatggggttcattcagtccaaccactctgtgatcatgt 481 Query: 504 acaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaaga 563 |||| |||||||||||||||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 482 acaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatggtgtgaaga 541 Query: 564 ggttcttctatgcctcgagcgcatgcatctaccctgaa 601 |||||||||||||||| || |||||||| ||||||||| Sbjct: 542 ggttcttctatgcctcaagtgcatgcatttaccctgaa 579
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 523 bits (264), Expect = e-145 Identities = 390/432 (90%) Strand = Plus / Plus Query: 170 ggaactccctatggcgagtacacctatgctgagctggagagggagttgtactggccatcc 229 |||||| | ||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 22 ggaactgcttatggcgagtacacctatgctgaactggagagggagcagtactggccgtct 81 Query: 230 gagaagctgagaatctcggttactggagctggtggtttcattggatcccatattgctcgc 289 ||||||||||| || ||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 82 gagaagctgaggatatcgatcaccggagctggtggtttcattggatcccacattgctcgc 141 Query: 290 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 349 || |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 142 cgtctgaagagcgaggggcattacatcatcgcctccgactggaagaagaatgagcacatg 201 Query: 350 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 409 || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 202 actgaggacatgttctgccatgagttccaccttgttgaccttagggtcatggacaactgc 261 Query: 410 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 469 || |||||||||| | |||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 262 ctcaaggtcaccaacggcgtcgaccatgtgttcaaccttgccgctgatatgggtggtatg 321 Query: 470 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 529 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 322 gggttcattcagtccaaccactctgtgatcatgtacaacaacaccatgatcagtttcaac 381 Query: 530 atgcttgaggccgggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgc 589 ||||| ||||| | |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 382 atgctcgaggctgcacgtatcaatggtgtgaagaggttcttctatgcctcaagtgcatgc 441 Query: 590 atctaccctgaa 601 || ||||||||| Sbjct: 442 atttaccctgaa 453
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 478 bits (241), Expect = e-131 Identities = 358/397 (90%) Strand = Plus / Plus Query: 170 ggaactccctatggcgagtacacctatgctgagctggagagggagttgtactggccatcc 229 |||||| | ||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 66859 ggaactgcttatggcgagtacacctatgctgaactggagagggagcagtactggccgtct 66918 Query: 230 gagaagctgagaatctcggttactggagctggtggtttcattggatcccatattgctcgc 289 ||||||||||| || ||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 66919 gagaagctgaggatatcgatcaccggagctggtggtttcattggatcccacattgctcgc 66978 Query: 290 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 349 || |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 66979 cgtctgaagagcgaggggcattacatcatcgcctccgactggaagaagaatgagcacatg 67038 Query: 350 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 409 || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 67039 actgaggacatgttctgccatgagttccaccttgttgaccttagggtcatggacaactgc 67098 Query: 410 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 469 || |||||||||| | |||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 67099 ctcaaggtcaccaacggcgtcgaccatgtgttcaaccttgccgctgatatgggtggtatg 67158 Query: 470 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 529 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 67159 gggttcattcagtccaaccactctgtgatcatgtacaacaacaccatgatcagtttcaac 67218 Query: 530 atgcttgaggccgggcgtatcaacggtgtgaagaggt 566 ||||| ||||| | |||||||| ||||||||||||| Sbjct: 67219 atgctcgaggctgcacgtatcaatggtgtgaagaggt 67255 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 563 aggttcttctatgcctcgagcgcatgcatctaccctgaa 601 ||||||||||||||||| || |||||||| ||||||||| Sbjct: 67359 aggttcttctatgcctcaagtgcatgcatttaccctgaa 67397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 478 bits (241), Expect = e-131 Identities = 358/397 (90%) Strand = Plus / Plus Query: 170 ggaactccctatggcgagtacacctatgctgagctggagagggagttgtactggccatcc 229 |||||| | ||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 14127221 ggaactgcttatggcgagtacacctatgctgaactggagagggagcagtactggccgtct 14127280 Query: 230 gagaagctgagaatctcggttactggagctggtggtttcattggatcccatattgctcgc 289 ||||||||||| || ||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 14127281 gagaagctgaggatatcgatcaccggagctggtggtttcattggatcccacattgctcgc 14127340 Query: 290 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 349 || |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 14127341 cgtctgaagagcgaggggcattacatcatcgcctccgactggaagaagaatgagcacatg 14127400 Query: 350 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 409 || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 14127401 actgaggacatgttctgccatgagttccaccttgttgaccttagggtcatggacaactgc 14127460 Query: 410 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 469 || |||||||||| | |||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 14127461 ctcaaggtcaccaacggcgtcgaccatgtgttcaaccttgccgctgatatgggtggtatg 14127520 Query: 470 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 529 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 14127521 gggttcattcagtccaaccactctgtgatcatgtacaacaacaccatgatcagtttcaac 14127580 Query: 530 atgcttgaggccgggcgtatcaacggtgtgaagaggt 566 ||||| ||||| | |||||||| ||||||||||||| Sbjct: 14127581 atgctcgaggctgcacgtatcaatggtgtgaagaggt 14127617 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 563 aggttcttctatgcctcgagcgcatgcatctaccctgaa 601 ||||||||||||||||| || |||||||| ||||||||| Sbjct: 14127721 aggttcttctatgcctcaagtgcatgcatttaccctgaa 14127759 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccatcgccatcgccagtc 91 |||||||||||||||||||| Sbjct: 15262111 cgccatcgccatcgccagtc 15262130
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 478 bits (241), Expect = e-131 Identities = 358/397 (90%) Strand = Plus / Plus Query: 170 ggaactccctatggcgagtacacctatgctgagctggagagggagttgtactggccatcc 229 |||||| | ||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 143350 ggaactgcttatggcgagtacacctatgctgaactggagagggagcagtactggccgtct 143409 Query: 230 gagaagctgagaatctcggttactggagctggtggtttcattggatcccatattgctcgc 289 ||||||||||| || ||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 143410 gagaagctgaggatatcgatcaccggagctggtggtttcattggatcccacattgctcgc 143469 Query: 290 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 349 || |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 143470 cgtctgaagagcgaggggcattacatcatcgcctccgactggaagaagaatgagcacatg 143529 Query: 350 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 409 || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 143530 actgaggacatgttctgccatgagttccaccttgttgaccttagggtcatggacaactgc 143589 Query: 410 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 469 || |||||||||| | |||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 143590 ctcaaggtcaccaacggcgtcgaccatgtgttcaaccttgccgctgatatgggtggtatg 143649 Query: 470 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 529 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 143650 gggttcattcagtccaaccactctgtgatcatgtacaacaacaccatgatcagtttcaac 143709 Query: 530 atgcttgaggccgggcgtatcaacggtgtgaagaggt 566 ||||| ||||| | |||||||| ||||||||||||| Sbjct: 143710 atgctcgaggctgcacgtatcaatggtgtgaagaggt 143746 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 563 aggttcttctatgcctcgagcgcatgcatctaccctgaa 601 ||||||||||||||||| || |||||||| ||||||||| Sbjct: 143850 aggttcttctatgcctcaagtgcatgcatttaccctgaa 143888
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 478 bits (241), Expect = e-131 Identities = 358/397 (90%) Strand = Plus / Plus Query: 170 ggaactccctatggcgagtacacctatgctgagctggagagggagttgtactggccatcc 229 |||||| | ||||||||||||||||||||||| |||||||||||| ||||||||| || Sbjct: 14135463 ggaactgcttatggcgagtacacctatgctgaactggagagggagcagtactggccgtct 14135522 Query: 230 gagaagctgagaatctcggttactggagctggtggtttcattggatcccatattgctcgc 289 ||||||||||| || ||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 14135523 gagaagctgaggatatcgatcaccggagctggtggtttcattggatcccacattgctcgc 14135582 Query: 290 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 349 || |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 14135583 cgtctgaagagcgaggggcattacatcatcgcctccgactggaagaagaatgagcacatg 14135642 Query: 350 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 409 || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 14135643 actgaggacatgttctgccatgagttccaccttgttgaccttagggtcatggacaactgc 14135702 Query: 410 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 469 || |||||||||| | |||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 14135703 ctcaaggtcaccaacggcgtcgaccatgtgttcaaccttgccgctgatatgggtggtatg 14135762 Query: 470 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 529 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 14135763 gggttcattcagtccaaccactctgtgatcatgtacaacaacaccatgatcagtttcaac 14135822 Query: 530 atgcttgaggccgggcgtatcaacggtgtgaagaggt 566 ||||| ||||| | |||||||| ||||||||||||| Sbjct: 14135823 atgctcgaggctgcacgtatcaatggtgtgaagaggt 14135859 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 563 aggttcttctatgcctcgagcgcatgcatctaccctgaa 601 ||||||||||||||||| || |||||||| ||||||||| Sbjct: 14135963 aggttcttctatgcctcaagtgcatgcatttaccctgaa 14136001 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccatcgccatcgccagtc 91 |||||||||||||||||||| Sbjct: 15270352 cgccatcgccatcgccagtc 15270371
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 474 bits (239), Expect = e-130 Identities = 374/419 (89%) Strand = Plus / Plus Query: 182 ggcgagtacacctatgctgagctggagagggagttgtactggccatccgagaagctgaga 241 |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| Sbjct: 151 ggcgagtacacctacgctgagctggagagggagccctactggccgagtgagaagctgagg 210 Query: 242 atctcggttactggagctggtggtttcattggatcccatattgctcgccgcctgaagagt 301 || ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 211 atttcgattactggggctggtggtttcattggatcccacattgctcgccgtctgaagaac 270 Query: 302 gaggggcactacatcattgcctctgactggaagaagaacgagcatatgaccgaggacatg 361 ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 271 gagggccattacatcattgcctctgactggaagaagaacgagcacatgaccgaggacatg 330 Query: 362 ttctgccatgagttccaccttgctgacctcagggtcatggacaactgccttaaggtcacc 421 |||||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 331 ttctgccatgagttccacctcgttgatctcagggtcatggacaactgtctcaaggtcacc 390 Query: 422 accaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatggggttcattcag 481 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 391 catggtgtcgaccatgtcttcaatcttgctgcagatatgggtggcatggggttcatccag 450 Query: 482 tccaaccactctgttatcatgtacaataacaccatgatcagtttcaacatgcttgaggcc 541 || || |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 451 tcaaatcactctgtgatcatgtacaacaacaccatgatcagttttaacatgctggaggct 510 Query: 542 gggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgcatctaccctga 600 | |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 511 gcacgtatcaatggtgtgaagaggttcttctatgcctcgagtgcatgcatttaccctga 569
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 474 bits (239), Expect = e-130 Identities = 374/419 (89%) Strand = Plus / Plus Query: 182 ggcgagtacacctatgctgagctggagagggagttgtactggccatccgagaagctgaga 241 |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| Sbjct: 153 ggcgagtacacctacgctgagctggagagggagccctactggccgagtgagaagctgagg 212 Query: 242 atctcggttactggagctggtggtttcattggatcccatattgctcgccgcctgaagagt 301 || ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 213 atttcgattactggggctggtggtttcattggatcccacattgctcgccgtctgaagaac 272 Query: 302 gaggggcactacatcattgcctctgactggaagaagaacgagcatatgaccgaggacatg 361 ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 273 gagggccattacatcattgcctctgactggaagaagaacgagcacatgaccgaggacatg 332 Query: 362 ttctgccatgagttccaccttgctgacctcagggtcatggacaactgccttaaggtcacc 421 |||||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 333 ttctgccatgagttccacctcgttgatctcagggtcatggacaactgtctcaaggtcacc 392 Query: 422 accaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatggggttcattcag 481 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 393 catggtgtcgaccatgtcttcaatcttgctgcagatatgggtggcatggggttcatccag 452 Query: 482 tccaaccactctgttatcatgtacaataacaccatgatcagtttcaacatgcttgaggcc 541 || || |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 453 tcaaatcactctgtgatcatgtacaacaacaccatgatcagttttaacatgctggaggct 512 Query: 542 gggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgcatctaccctga 600 | |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 513 gcacgtatcaatggtgtgaagaggttcttctatgcctcgagtgcatgcatttaccctga 571
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 289 bits (146), Expect = 5e-75 Identities = 338/402 (84%) Strand = Plus / Plus Query: 200 gagctggagagggagttgtactggccatccgagaagctgagaatctcggttactggagct 259 |||||||||| |||| |||||||||| ||||||||| | |||||| |||| |||||| Sbjct: 106 gagctggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagct 165 Query: 260 ggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcatt 319 || || ||||| | |||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 166 ggcgggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcatt 225 Query: 320 gcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccac 379 || |||||||||||||| || ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 226 gcttctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccat 285 Query: 380 cttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtc 439 |||| ||| | ||||| |||||||||||||| ||||| |||||| || |||||||| Sbjct: 286 cttgttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgtt 345 Query: 440 ttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatc 499 ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 346 ttcaaccttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatc 405 Query: 500 atgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtg 559 |||||||| |||||||||||||| || |||||||||||||||| | || || ||||| Sbjct: 406 atgtacaacaacaccatgatcagctttaacatgcttgaggccgctaggattaatggtgtc 465 Query: 560 aagaggttcttctatgcctcgagcgcatgcatctaccctgaa 601 || |||||||| ||||| || || || || |||||||||||| Sbjct: 466 aaaaggttcttttatgcttcaagtgcttgtatctaccctgaa 507
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 283 bits (143), Expect = 3e-73 Identities = 293/343 (85%) Strand = Plus / Minus Query: 200 gagctggagagggagttgtactggccatccgagaagctgagaatctcggttactggagct 259 |||||||||| |||| |||||||||| ||||||||| | |||||| |||| |||||| Sbjct: 133141 gagctggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagct 133082 Query: 260 ggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcatt 319 || || ||||| | |||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 133081 ggcgggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcatt 133022 Query: 320 gcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccac 379 || |||||||||||||| || ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 133021 gcttctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccat 132962 Query: 380 cttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtc 439 |||| ||| | ||||| |||||||||||||| ||||| |||||| || |||||||| Sbjct: 132961 cttgttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgtt 132902 Query: 440 ttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatc 499 ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 132901 ttcaaccttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatc 132842 Query: 500 atgtacaataacaccatgatcagtttcaacatgcttgaggccg 542 |||||||| |||||||||||||| || |||||||||||||||| Sbjct: 132841 atgtacaacaacaccatgatcagctttaacatgcttgaggccg 132799
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 283 bits (143), Expect = 3e-73 Identities = 293/343 (85%) Strand = Plus / Minus Query: 200 gagctggagagggagttgtactggccatccgagaagctgagaatctcggttactggagct 259 |||||||||| |||| |||||||||| ||||||||| | |||||| |||| |||||| Sbjct: 21609622 gagctggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagct 21609563 Query: 260 ggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcatt 319 || || ||||| | |||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 21609562 ggcgggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcatt 21609503 Query: 320 gcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccac 379 || |||||||||||||| || ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 21609502 gcttctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccat 21609443 Query: 380 cttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtc 439 |||| ||| | ||||| |||||||||||||| ||||| |||||| || |||||||| Sbjct: 21609442 cttgttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgtt 21609383 Query: 440 ttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatc 499 ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 21609382 ttcaaccttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatc 21609323 Query: 500 atgtacaataacaccatgatcagtttcaacatgcttgaggccg 542 |||||||| |||||||||||||| || |||||||||||||||| Sbjct: 21609322 atgtacaacaacaccatgatcagctttaacatgcttgaggccg 21609280
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 283 bits (143), Expect = 3e-73 Identities = 293/343 (85%) Strand = Plus / Minus Query: 200 gagctggagagggagttgtactggccatccgagaagctgagaatctcggttactggagct 259 |||||||||| |||| |||||||||| ||||||||| | |||||| |||| |||||| Sbjct: 21919821 gagctggagaaggagccttactggccatttgagaagctgcggatctcgattacgggagct 21919762 Query: 260 ggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatcatt 319 || || ||||| | |||||| || || | ||||| ||||| ||||| |||||||||||| Sbjct: 21919761 ggcgggttcatcgcatcccacatcgcgaggcgcctcaagagcgagggccactacatcatt 21919702 Query: 320 gcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttccac 379 || |||||||||||||| || ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 21919701 gcttctgactggaagaaaaatgagcacatgactgaggatatgttctgccatgagttccat 21919642 Query: 380 cttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccatgtc 439 |||| ||| | ||||| |||||||||||||| ||||| |||||| || |||||||| Sbjct: 21919641 cttgttgatttgagggtgatggacaactgcctcaaggtgaccaccggggttgaccatgtt 21919582 Query: 440 ttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatc 499 ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 21919581 ttcaaccttgccgctgatatgggagggatgggattcattcaatccaatcactctgttatc 21919522 Query: 500 atgtacaataacaccatgatcagtttcaacatgcttgaggccg 542 |||||||| |||||||||||||| || |||||||||||||||| Sbjct: 21919521 atgtacaacaacaccatgatcagctttaacatgcttgaggccg 21919479
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 167 bits (84), Expect = 5e-38 Identities = 207/248 (83%) Strand = Plus / Plus Query: 281 attgctcgccgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaac 340 |||||||| || ||||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 151 attgctcgtcgtttgaagagcgagggccactacataattgcctccgattggaagaagaat 210 Query: 341 gagcatatgaccgaggacatgttctgccatgagttccaccttgctgacctcagggtcatg 400 ||||| ||||| ||||| |||||||| |||||||| || ||||| || || ||||| ||| Sbjct: 211 gagcacatgacagaggatatgttctgtcatgagtttcatcttgcggatcttagggttatg 270 Query: 401 gacaactgccttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatg 460 || || ||| | ||||| || | || ||||||||||||||||| |||||||||||| Sbjct: 271 gataattgcttgaaggtaacaaaaggtgttgaccatgtcttcaatctcgctgctgatatg 330 Query: 461 ggaggcatggggttcattcagtccaaccactctgttatcatgtacaataacaccatgatc 520 || |||||||| |||||||||||||||||||| |||||| | || || ||||| |||||| Sbjct: 331 ggtggcatgggtttcattcagtccaaccactcggttatcttctataacaacactatgatc 390 Query: 521 agtttcaa 528 || ||||| Sbjct: 391 agcttcaa 398
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 161 bits (81), Expect = 3e-36 Identities = 252/309 (81%) Strand = Plus / Plus Query: 293 ctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatgacc 352 ||||||| ||||||||| ||||| ||||| || |||||||||||||| ||||| ||| | Sbjct: 328 ctgaagactgaggggcattacattattgcttccgactggaagaagaatgagcacatgtct 387 Query: 353 gaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgcctt 412 ||||||||||| || ||||||||||| |||| ||| |||||||| ||||| ||||| | Sbjct: 388 gaggacatgttttgtcatgagttccatcttgttgatctcagggtgatggataactgtttg 447 Query: 413 aaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatgggg 472 || ||||| | || || ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 448 aaagtcacaaaaggagttgatcatgtgttcaatctcgctgctgatatgggaggtatgggc 507 Query: 473 ttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaacatg 532 ||||||||||| |||||||| || |||||||| || ||||| |||||||| || |||||| Sbjct: 508 ttcattcagtcgaaccactcggtgatcatgtataacaacactatgatcagctttaacatg 567 Query: 533 cttgaggccgggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgcatc 592 | ||||| | || || |||| ||||||||||| ||||| || || || |||||| Sbjct: 568 atggaggcttcaagaataaatagtgttaagaggttcttttatgcatccagtgcttgcatc 627 Query: 593 taccctgaa 601 ||||||||| Sbjct: 628 taccctgaa 636
>dbj|AB235855.1| Oryza sativa (japonica cultivar-group) OsGME mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1053 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 447 ttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtaca 506 ||||||| |||||||| || ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 230 ttgctgcagatatgggcggtatgggttttattcaatccaaccactctgttatcttgtaca 289 Query: 507 ataacaccatgatcagtttcaacatg 532 | || | |||||||| ||||||||| Sbjct: 290 acaatattatgatcagcttcaacatg 315
>dbj|AK109046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D11, full insert sequence Length = 1134 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 447 ttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtaca 506 ||||||| |||||||| || ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 250 ttgctgcagatatgggcggtatgggttttattcaatccaaccactctgttatcttgtaca 309 Query: 507 ataacaccatgatcagtttcaacatg 532 | || | |||||||| ||||||||| Sbjct: 310 acaatattatgatcagcttcaacatg 335
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 254 ggagctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactac 313 |||||||| |||||||||| ||| || |||||||| || ||||| || || || ||| Sbjct: 278 ggagctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattac 337 Query: 314 atcattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgag 373 | ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| Sbjct: 338 gtgattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgag 397 Query: 374 ttccaccttgctgacctcagggtcatgga 402 ||||| |||| ||| || ||||| ||||| Sbjct: 398 ttccatcttgttgatcttagggttatgga 426 Score = 48.1 bits (24), Expect = 0.034 Identities = 75/92 (81%) Strand = Plus / Plus Query: 449 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 508 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 473 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 532 Query: 509 aacaccatgatcagtttcaacatgcttgaggc 540 || || ||||| |||||||| ||| ||||||| Sbjct: 533 aatactatgattagtttcaatatgattgaggc 564
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 254 ggagctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactac 313 |||||||| |||||||||| ||| || |||||||| || ||||| || || || ||| Sbjct: 100 ggagctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattac 159 Query: 314 atcattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgag 373 | ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| Sbjct: 160 gtgattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgag 219 Query: 374 ttccaccttgctgacctcagggtcatgga 402 ||||| |||| ||| || ||||| ||||| Sbjct: 220 ttccatcttgttgatcttagggttatgga 248 Score = 48.1 bits (24), Expect = 0.034 Identities = 75/92 (81%) Strand = Plus / Plus Query: 449 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 508 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 295 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 354 Query: 509 aacaccatgatcagtttcaacatgcttgaggc 540 || || ||||| |||||||| ||| ||||||| Sbjct: 355 aatactatgattagtttcaatatgattgaggc 386
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 254 ggagctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactac 313 |||||||| |||||||||| ||| || |||||||| || ||||| || || || ||| Sbjct: 163 ggagctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattac 222 Query: 314 atcattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgag 373 | ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| Sbjct: 223 gtgattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgag 282 Query: 374 ttccaccttgctgacctcagggtcatgga 402 ||||| |||| ||| || ||||| ||||| Sbjct: 283 ttccatcttgttgatcttagggttatgga 311 Score = 48.1 bits (24), Expect = 0.034 Identities = 75/92 (81%) Strand = Plus / Plus Query: 449 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 508 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 358 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 417 Query: 509 aacaccatgatcagtttcaacatgcttgaggc 540 || || ||||| |||||||| ||| ||||||| Sbjct: 418 aatactatgattagtttcaatatgattgaggc 449
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 254 ggagctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactac 313 |||||||| |||||||||| ||| || |||||||| || ||||| || || || ||| Sbjct: 163 ggagctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattac 222 Query: 314 atcattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgag 373 | ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| Sbjct: 223 gtgattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgag 282 Query: 374 ttccaccttgctgacctcagggtcatgga 402 ||||| |||| ||| || ||||| ||||| Sbjct: 283 ttccatcttgttgatcttagggttatgga 311 Score = 48.1 bits (24), Expect = 0.034 Identities = 75/92 (81%) Strand = Plus / Plus Query: 449 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 508 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 358 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 417 Query: 509 aacaccatgatcagtttcaacatgcttgaggc 540 || || ||||| |||||||| ||| ||||||| Sbjct: 418 aatactatgattagtttcaatatgattgaggc 449
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 254 ggagctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactac 313 |||||||| |||||||||| ||| || |||||||| || ||||| || || || ||| Sbjct: 20111 ggagctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattac 20052 Query: 314 atcattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgag 373 | ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| Sbjct: 20051 gtgattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgag 19992 Query: 374 ttccaccttgctgacctcagggtcatgga 402 ||||| |||| ||| || ||||| ||||| Sbjct: 19991 ttccatcttgttgatcttagggttatgga 19963 Score = 48.1 bits (24), Expect = 0.034 Identities = 75/92 (81%) Strand = Plus / Minus Query: 449 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 508 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 19916 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 19857 Query: 509 aacaccatgatcagtttcaacatgcttgaggc 540 || || ||||| |||||||| ||| ||||||| Sbjct: 19856 aatactatgattagtttcaatatgattgaggc 19825
>ref|XM_467476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 58 gaccacgccgccatcgccatcgcca 82
>ref|XM_466916.1| Oryza sativa (japonica cultivar-group), mRNA Length = 414 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 26 gaccacgccgccatcgccatcgcca 2
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 24915438 gaccacgccgccatcgccatcgcca 24915414 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 agaagctgagaatctcggtt 250 |||||||||||||||||||| Sbjct: 21550808 agaagctgagaatctcggtt 21550789 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 20716109 cgccgccatcgccatcgcca 20716128
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 29754159 gaccacgccgccatcgccatcgcca 29754135 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 25447300 gaccacgccgccatcgccatcgcca 25447276
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 9993 gaccacgccgccatcgccatcgcca 9969
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 10504 gaccacgccgccatcgccatcgcca 10480
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 123138 gaccacgccgccatcgccatcgcca 123114
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 126521 gaccacgccgccatcgccatcgcca 126497
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||||||||||||| Sbjct: 102962 gaccacgccgccatcgccatcgcca 102938
>ref|XM_805671.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510391.10) partial mRNA Length = 10446 Score = 44.1 bits (22), Expect = 0.52 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgccagtcgccacctcccccgcc 106 |||||||||||||||||||| |||||||| || ||||| Sbjct: 4940 cgccgccatcgccatcgcca-tcgccaccgccaccgcc 4976
>gb|AE008798.1| Salmonella typhimurium LT2, section 102 of 220 of the complete genome Length = 20178 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 acgccgccatcgccatcgccag 89 |||||||||||||||||||||| Sbjct: 11198 acgccgccatcgccatcgccag 11177
>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete sequence Length = 196777 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 cacctatgctgagctggagag 210 ||||||||||||||||||||| Sbjct: 191405 cacctatgctgagctggagag 191425
>ref|NM_188289.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2106 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cacgccgccatcgccatcgcc 87 ||||||||||||||||||||| Sbjct: 215 cacgccgccatcgccatcgcc 195
>ref|XM_481148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 106 acgccgccatcgccatcgcca 86
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgccagtcgccacc 97 |||||||||||||||||||| |||||||| Sbjct: 10649 cgccgccatcgccatcgcca-tcgccacc 10676
>ref|XM_450618.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3331 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||| ||||||||||||||||| Sbjct: 497 gaccacgacgccatcgccatcgcca 473
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 gccgccatcgccatcgccagtcgcc 94 |||||||||||||||||||| |||| Sbjct: 3776183 gccgccatcgccatcgccagccgcc 3776207
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||| ||||||||| Sbjct: 14703296 gaccacgccgccatcaccatcgcca 14703320
>gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosome 15, complete sequence Length = 171980 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 cacctatgctgagctggagag 210 ||||||||||||||||||||| Sbjct: 142060 cacctatgctgagctggagag 142040
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 gccgccatcgccatcgccagtcgcc 94 |||||||||||||||||||| |||| Sbjct: 316287 gccgccatcgccatcgccagccgcc 316311
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 gccgccatcgccatcgccagtcgcc 94 |||||||||||||||||||| |||| Sbjct: 294590 gccgccatcgccatcgccagccgcc 294614
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||| ||||||||| Sbjct: 42208 gaccacgccgccatcaccatcgcca 42232
>dbj|AK143797.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430109O17 product:unclassifiable, full insert sequence Length = 922 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 cacctatgctgagctggagag 210 ||||||||||||||||||||| Sbjct: 715 cacctatgctgagctggagag 735
>gb|AF223462.1|AF223462 Synechococcus PCC7918 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 465 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 142 acgccgccatcgccatcgcca 162
>gb|AF223460.1|AF223460 Synechococcus PCC7009 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 162 acgccgccatcgccatcgcca 182
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||| ||||||||||||||||| Sbjct: 11827258 gaccacgacgccatcgccatcgcca 11827234 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caccgccgcctcctatcccg 41 |||||||||||||||||||| Sbjct: 3716552 caccgccgcctcctatcccg 3716533
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 10216458 acgccgccatcgccatcgcca 10216478 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 cgccatcgccatcgccagtcgcca 95 |||||||||||||||| ||||||| Sbjct: 15081648 cgccatcgccatcgcccgtcgcca 15081625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||||||||||| ||||||||| Sbjct: 14697830 gaccacgccgccatcaccatcgcca 14697854
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cacgccgccatcgccatcgcc 87 ||||||||||||||||||||| Sbjct: 5492603 cacgccgccatcgccatcgcc 5492583
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 22481 acgccgccatcgccatcgcca 22501
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cacgccgccatcgccatcgcc 87 ||||||||||||||||||||| Sbjct: 89443 cacgccgccatcgccatcgcc 89423
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||| ||||||||||||||||| Sbjct: 8748 gaccacgacgccatcgccatcgcca 8724
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||| ||||||||||||||||| Sbjct: 70076 gaccacgacgccatcgccatcgcca 70052
>dbj|AK107040.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C02, full insert sequence Length = 965 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 acgccgccatcgccatcgcca 88 ||||||||||||||||||||| Sbjct: 106 acgccgccatcgccatcgcca 86
>dbj|AK065958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D17, full insert sequence Length = 3330 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gaccacgccgccatcgccatcgcca 88 ||||||| ||||||||||||||||| Sbjct: 497 gaccacgacgccatcgccatcgcca 473
>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete sequence Length = 203546 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 69 cgccgccatcgccatcgccagtcgccacc 97 |||||||||||||||||||| |||||||| Sbjct: 168789 cgccgccatcgccatcgcca-tcgccacc 168762
>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete sequence Length = 165747 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 acctatgctgagctggagagg 211 ||||||||||||||||||||| Sbjct: 27022 acctatgctgagctggagagg 27042
>ref|XM_481736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 cgccatcgccatcgccagtcgcca 95 |||||||||||||||| ||||||| Sbjct: 936 cgccatcgccatcgcccgtcgcca 913
>ref|NM_204719.1| Gallus gallus chondroitin sulfate proteoglycan 5 (neuroglycan C) (CSPG5), mRNA Length = 2000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 accacgccgccatcgccatc 84 |||||||||||||||||||| Sbjct: 576 accacgccgccatcgccatc 557
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccatcgccatcgccagtc 91 |||||||||||||||||||| Sbjct: 178761 cgccatcgccatcgccagtc 178780
>gb|AY023264.1| Oryza sativa microsatellite MRG5589 containing (GGC)X8, closest to marker S11922, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 107 cgccgccatcgccatcgcca 88
>gb|AY804579.1| Drosophila yakuba strain Tai18 bangles and beads (bnb) gene, partial cds Length = 1250 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 171 cgccgccatcgccatcgcca 190
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 1594039 cgccgccatcgccatcgcca 1594058
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 135838 cgccgccatcgccatcgcca 135857
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 492 cgccgccatcgccatcgcca 511
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 2840607 cgccgccatcgccatcgcca 2840626 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 2512001 cgccgccatcgccatcgcca 2512020
>gb|AC102129.9| Mus musculus chromosome 7, clone RP23-220N19, complete sequence Length = 178200 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ctcagggtcatggacaactgcctt 412 ||||||||||||| |||||||||| Sbjct: 88988 ctcagggtcatggtcaactgcctt 88965
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.2 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 72 cgccatcgccatcgccagtcgccacctcccccgcct 107 ||||||||||||||||| |||||||| || |||||| Sbjct: 3018568 cgccatcgccatcgcca-tcgccaccaccaccgcct 3018602
>gb|AE004244.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 152 of 251 of the complete chromosome Length = 13634 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccacgccgccatcgccatcgccag 89 |||||||||||| ||||||||||| Sbjct: 1321 ccacgccgccattgccatcgccag 1298
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ctcagggtcatggacaactgcctt 412 ||||||||||||| |||||||||| Sbjct: 190033 ctcagggtcatggtcaactgcctt 190010
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 1992 cgccgccatcgccatcgcca 2011
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 130643 cgccgccatcgccatcgcca 130662
>emb|AJ292374.1|EMU292374 Echinococcus multilocularis mRNA for putative cyclin H (cych gene) Length = 2224 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 atcgccagtcgccacctcccccgc 105 |||| ||||||||||||||||||| Sbjct: 642 atcggcagtcgccacctcccccgc 619
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cctcgttaccgccgccggca 124 |||||||||||||||||||| Sbjct: 1420747 cctcgttaccgccgccggca 1420728
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cctcgttaccgccgccggca 124 |||||||||||||||||||| Sbjct: 2267381 cctcgttaccgccgccggca 2267400
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccatcgccatcgccagtc 91 |||||||||||||||||||| Sbjct: 115810 cgccatcgccatcgccagtc 115829
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 27478016 cgccgccatcgccatcgcca 27478035
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 23159016 cgccgccatcgccatcgcca 23159035
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 23932003 cgccgccatcgccatcgcca 23932022
>gb|AF292101.1|AF292101 Gallus gallus CALEB isoform b (CALEB) mRNA, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 accacgccgccatcgccatc 84 |||||||||||||||||||| Sbjct: 317 accacgccgccatcgccatc 298
>gb|AC158550.4| Mus musculus chromosome 7, clone RP24-192B7, complete sequence Length = 169846 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ctcagggtcatggacaactgcctt 412 ||||||||||||| |||||||||| Sbjct: 26468 ctcagggtcatggtcaactgcctt 26445
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cccgcctcgttaccgccgccggca 124 |||||||||| ||||||||||||| Sbjct: 4778280 cccgcctcgtcaccgccgccggca 4778303
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 agaagctgagaatctcggtt 250 |||||||||||||||||||| Sbjct: 107992 agaagctgagaatctcggtt 107973
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 138516 cgccgccatcgccatcgcca 138535
>emb|Y09264.1|GG09264 Gallus gallus mRNA for epidermal growth factor (CALEB gene) Length = 2000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 accacgccgccatcgccatc 84 |||||||||||||||||||| Sbjct: 576 accacgccgccatcgccatc 557
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caccgccgcctcctatcccg 41 |||||||||||||||||||| Sbjct: 124813 caccgccgcctcctatcccg 124794
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caccgccgcctcctatcccg 41 |||||||||||||||||||| Sbjct: 23854 caccgccgcctcctatcccg 23835
>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0683E12 Length = 165766 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 cgccatcgccatcgccagtcgcca 95 |||||||||||||||| ||||||| Sbjct: 71900 cgccatcgccatcgcccgtcgcca 71877
>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689D06 Length = 146551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 cgccatcgccatcgccagtcgcca 95 |||||||||||||||| ||||||| Sbjct: 80562 cgccatcgccatcgcccgtcgcca 80539
>dbj|AK101340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J18, full insert sequence Length = 2261 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 683 cgccgccatcgccatcgcca 664
>dbj|AK064335.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G09, full insert sequence Length = 1830 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 688 cgccgccatcgccatcgcca 669
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 agctggtggtttcattggat 275 |||||||||||||||||||| Sbjct: 47749 agctggtggtttcattggat 47730
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gccgccatcgccatcgccag 89 |||||||||||||||||||| Sbjct: 2324959 gccgccatcgccatcgccag 2324940
>dbj|AP003969.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-755E23, complete sequence Length = 163000 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 ctggagctggtggtttcattggatccca 279 |||||||||| |||||||||||||||| Sbjct: 111035 ctggagctggctgtttcattggatccca 111008
>dbj|AP003678.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-12O11, complete sequences Length = 153311 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 ctggagctggtggtttcattggatccca 279 |||||||||| |||||||||||||||| Sbjct: 26622 ctggagctggctgtttcattggatccca 26595
>gb|AF031552.1|AF031552 Vibrio cholerae magnesium transporter (mgtE) gene, partial cds; sensor kinase (vieS), response regulator (vieA), and response regulator (vieB) genes, complete cds; and collagenase (vcc) gene, partial cds Length = 9861 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccacgccgccatcgccatcgccag 89 |||||||||||| ||||||||||| Sbjct: 5 ccacgccgccattgccatcgccag 28
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 23087207 cgccgccatcgccatcgcca 23087226
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgccgccatcgccatcgcca 88 |||||||||||||||||||| Sbjct: 19381 cgccgccatcgccatcgcca 19362 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,601,263 Number of Sequences: 3902068 Number of extensions: 4601263 Number of successful extensions: 85504 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84141 Number of HSP's gapped (non-prelim): 1354 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
