ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38d03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor complex, complete cds Length = 1828 Score = 517 bits (261), Expect = e-143 Identities = 435/493 (88%) Strand = Plus / Plus Query: 116 gctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcctacgggga 175 |||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgctgctgctcgtgtcgctcgccgcggcggcggacatgtcgatcgtgtcctacgggga 207 Query: 176 gcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacggcagtac 235 ||| ||||| ||||||| |||||||||||||| ||||||||||||| ||||||| | || Sbjct: 208 gcgcagcgacgaggaggcgcggcggatgtacgcggagtggatggcggcgcacggccggac 267 Query: 236 gtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacctccgcta 295 ||||||||| |||||||||||||||| || | | ||| ||||||||||||||||||||| Sbjct: 268 ctacaacgccgtcggcgaggaggagcggcggtaccaggtgttccgggacaacctccgcta 327 Query: 296 catcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcggcctcaa 355 ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 328 catcgacgcgcacaacgccgccgccgacgcgggcgtccactccttccgcctcggcctcaa 387 Query: 356 ccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgcccgcactaa 415 |||||||||||||||||||||||| ||||||||| |||||||||||||||| | || | Sbjct: 388 ccgcttcgccgacctcaccaacgacgagtaccgcgccacctacctcggcgccaggaccag 447 Query: 416 gcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacgagctgcc 475 ||| | ||||| |||||||| ||||||||||||| |||||||||||||| || ||||| Sbjct: 448 gccgcagagggagaggaagctcggcgccaggtaccacgccgccgacaacgaggacctgcc 507 Query: 476 cgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctg 535 |||||||||||||||||| |||||||| || | | ||||||||||||||| ||| Sbjct: 508 ggagtccgtcgactggagggccaagggcgccgtcgccgaggtcaaggaccagggcagcta 567 Query: 536 tgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagattgtcac 595 |||||||| | |||||||||| ||||||||||||| |||||||||||||||||||| || Sbjct: 568 cgggagctgttgggctttctcaacaatagcagctgtggaaggcatcaaccagattgttac 627 Query: 596 aggcgacatgatc 608 ||||||| ||||| Sbjct: 628 aggcgacttgatc 640
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 450 bits (227), Expect = e-123 Identities = 416/479 (86%) Strand = Plus / Plus Query: 130 tgtcgctggcggcggcggcggacatgtcgatcgtgtcctacggggagcggagcgaggagg 189 ||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 198 tgtcgctcgccgcggcggcggacatgtcgatcgtgtcctacggggagcgcagcgacgagg 257 Query: 190 aggtccggcggatgtacgccgagtggatggcggagcacggcagtacgtacaacgccatcg 249 ||| |||||||||||||| ||||||||||||| ||||||| | || ||||||||| ||| Sbjct: 258 aggcgcggcggatgtacgcggagtggatggcggcgcacggccggacctacaacgccgtcg 317 Query: 250 gcgaggaggagcgccgcttcgaggcgttccgggacaacctccgctacatcgaccagcaca 309 ||||||||||||| || | | ||| |||||||||||||||||||||||||||| ||||| Sbjct: 318 gcgaggaggagcggcggtaccaggtgttccgggacaacctccgctacatcgacgcgcaca 377 Query: 310 acgccgccgccgacgccggggtccactccttccgcctcggcctcaaccgcttcgccgacc 369 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acgccgccgccgacgcgggcgtccactccttccgcctcggcctcaaccgcttcgccgacc 437 Query: 370 tcaccaacgaggagtaccgcagcacctacctcggcgcccgcactaagcccgaccgggagc 429 |||||||||| ||||||||| |||||||||||||| | | | | ||| | ||||| Sbjct: 438 tcaccaacgacgagtaccgcgccacctacctcggcgtcaggagcaggccgcagagggaga 497 Query: 430 ggaagctcagcgccaggtaccaggccgccgacaacgacgagctgcccgagtccgtcgact 489 ||| |||| | | |||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 498 ggaggctcggtgacaggtacctggccggcgacaacgaggacctgccggagtccgtcgact 557 Query: 490 ggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtgggagctgctagg 549 || || |||||||| || | | ||||||||||||||| |||| ||||| |||| || Sbjct: 558 ggcgggccaagggcgccgtcgcggaggtcaaggaccagggcagctgcgggagttgctggg 617 Query: 550 ctttctcagcaatagcagctgtcgaaggcatcaaccagattgtcacaggcgacatgatc 608 |||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| Sbjct: 618 ctttctcaacaatagcggctgtggaaggcatcaaccagattgttactggcgacatgatc 676
>dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A11, full insert sequence Length = 752 Score = 438 bits (221), Expect = e-120 Identities = 430/499 (86%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 91 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 147 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 148 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 207 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 208 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 267 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 327 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 328 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 387 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 388 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 447 Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagg 528 |||||| |||||||| |||||||||| ||||| || || | || |||||||||||| Sbjct: 448 cgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccagg 507 Query: 529 gcggctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccaga 588 | || || || || |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 508 gaggttgcggaagttgctgggctttctcagcaatagcagctgtagaaggcatcaaccaga 567 Query: 589 ttgtcacaggcgacatgat 607 |||| || |||||| |||| Sbjct: 568 ttgttactggcgacctgat 586
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 438 bits (221), Expect = e-120 Identities = 430/499 (86%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 91 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 147 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 148 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 207 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 208 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 267 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 327 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 328 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 387 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 388 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 447 Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagg 528 |||||| |||||||| |||||||||| ||||| || || | || |||||||||||| Sbjct: 448 cgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccagg 507 Query: 529 gcggctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccaga 588 | || || || || |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 508 gaggttgcggaagttgctgggctttctcagcaatagcagctgtagaaggcatcaaccaga 567 Query: 589 ttgtcacaggcgacatgat 607 |||| || |||||| |||| Sbjct: 568 ttgttactggcgacctgat 586
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 438 bits (221), Expect = e-120 Identities = 430/499 (86%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 91 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 147 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 148 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 207 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 208 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 267 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 327 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 328 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 387 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 388 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 447 Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagg 528 |||||| |||||||| |||||||||| ||||| || || | || |||||||||||| Sbjct: 448 cgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccagg 507 Query: 529 gcggctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccaga 588 | || || || || |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 508 gaggttgcggaagttgctgggctttctcagcaatagcagctgtagaaggcatcaaccaga 567 Query: 589 ttgtcacaggcgacatgat 607 |||| || |||||| |||| Sbjct: 568 ttgttactggcgacctgat 586
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 430 bits (217), Expect = e-117 Identities = 429/499 (85%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 71 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 127 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 128 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 187 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 188 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 247 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 307 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 308 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 367 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 368 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 427 Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagg 528 |||||| |||||||| |||||||||| ||||| || || | || |||||||||||| Sbjct: 428 cgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggaccagg 487 Query: 529 gcggctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccaga 588 | || || || || |||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 488 gaggttgcggaagttgctgggctttctcagcaatagcagctgtagaagacatcaaccaga 547 Query: 589 ttgtcacaggcgacatgat 607 |||| || |||||| |||| Sbjct: 548 ttgttactggcgacctgat 566
>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds Length = 1830 Score = 426 bits (215), Expect = e-116 Identities = 407/470 (86%), Gaps = 2/470 (0%) Strand = Plus / Plus Query: 141 gcggcggcggac--atgtcgatcgtgtcctacggggagcggagcgaggaggaggtccggc 198 |||||||||||| |||||||||||||||||||||||||| | ||| ||||||| |||| Sbjct: 172 gcggcggcggactaatgtcgatcgtgtcctacggggagcgcaccgacgaggaggcgcggc 231 Query: 199 ggatgtacgccgagtggatggcggagcacggcagtacgtacaacgccatcggcgaggagg 258 |||||||||| ||||||||||||| ||||||| | || ||||||||| |||||| ||||| Sbjct: 232 ggatgtacgcggagtggatggcggcgcacggccggacctacaacgccgtcggcgcggagg 291 Query: 259 agcgccgcttcgaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccg 318 |||| || | | ||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 292 agcggcggtaccaggtgttccgggacaacctccgctacatcgacgcgcacaacgccgccg 351 Query: 319 ccgacgccggggtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacg 378 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ccgacgcgggcgtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacg 411 Query: 379 aggagtaccgcagcacctacctcggcgcccgcactaagcccgaccgggagcggaagctca 438 | ||||||| |||||||||||||||| | || | ||| | |||| |||||||| Sbjct: 412 acgagtacccggccacctacctcggcgccaggaccaggccgcagagggacaggaagctcg 471 Query: 439 gcgccaggtaccaggccgccgacaacgacgagctgcccgagtccgtcgactggaggaaga 498 ||||||||||||| |||||||||||||| || ||||| |||||||||||||||||| | Sbjct: 472 gcgccaggtaccacgccgccgacaacgaggacctgccggagtccgtcgactggagggcca 531 Query: 499 agggcgcagttggtgccgtcaaggaccagggcggctgtgggagctgctaggctttctcag 558 ||||||| || | | ||||||||||||||| |||| |||| || | |||||||||| Sbjct: 532 agggcgccgtcgcggaggtcaaggaccagggcagctgcgggacgtgttgggctttctcaa 591 Query: 559 caatagcagctgtcgaaggcatcaaccagattgtcacaggcgacatgatc 608 ||||||||||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 592 caatagcagctgtggaaggcatcaaccagattgttacaggtgacttgatc 641
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 416 bits (210), Expect = e-113 Identities = 430/500 (86%), Gaps = 5/500 (1%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 26 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 82 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 83 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 142 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 143 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 202 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 262 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 263 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 322 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 323 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 382 Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagg 528 |||||| |||||||| |||||||||| ||||| || || | || |||||||||| | Sbjct: 383 cgctgccggagtccgttgactggaggaccaagggggccgtggctgagatcaaggacca-g 441 Query: 529 gcggctgtggg-agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccag 587 | || || ||| || |||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 442 gaggttgcgggaagttgctgggctttctcagcaatagcagctgtagaaggcatcaaccag 501 Query: 588 attgtcacaggcgacatgat 607 ||||| || |||||| |||| Sbjct: 502 attgttactggcgacctgat 521
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 367 bits (185), Expect = 3e-98 Identities = 337/387 (87%), Gaps = 3/387 (0%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 33160796 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 33160740 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 33160739 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 33160680 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 33160679 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 33160620 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33160619 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 33160560 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 33160559 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 33160500 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 33160499 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 33160440 Query: 469 agctgcccgagtccgtcgactggagga 495 |||||| |||||||| |||||||||| Sbjct: 33160439 cgctgccggagtccgttgactggagga 33160413 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 543 tgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagattgtcacaggcgac 602 |||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 33159324 tgctgggctttctcagcaatagcagctgtagaaggcatcaaccagattgttactggcgac 33159265 Query: 603 atgat 607 |||| Sbjct: 33159264 ctgat 33159260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | ||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 34240246 ttccgcctcgggatgaaccgcttcgccgacctcaccaacggcgagttccgcgccacctac 34240305 Query: 399 ctcggc 404 |||||| Sbjct: 34240306 ctcggc 34240311 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 34210145 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 34210086 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 34210085 ctcggcgcc 34210077 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 34210019 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 34209960 Query: 528 ggc 530 ||| Sbjct: 34209959 ggc 34209957 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 431 gaagctcagcgccaggtaccaggccgccgacaa 463 |||||| |||||||| |||||||||||| |||| Sbjct: 22958915 gaagctgagcgccagataccaggccgcccacaa 22958947 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 25163326 cgccgccgccgacgccgggg 25163345 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaa 376 |||||| |||||| ||||||||||||||||| Sbjct: 6971124 ctcggcgtcaaccagttcgccgacctcaccaa 6971155
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 367 bits (185), Expect = 3e-98 Identities = 337/387 (87%), Gaps = 3/387 (0%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 51186 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 51130 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 51129 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 51070 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 51069 gcaagaactacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 51010 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51009 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 50950 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 50949 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 50890 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 50889 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 50830 Query: 469 agctgcccgagtccgtcgactggagga 495 |||||| |||||||| |||||||||| Sbjct: 50829 cgctgccggagtccgttgactggagga 50803 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 543 tgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagattgtcacaggcgac 602 |||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 49717 tgctgggctttctcagcaatagcagctgtagaaggcatcaaccagattgttactggcgac 49658 Query: 603 atgat 607 |||| Sbjct: 49657 ctgat 49653
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 367 bits (185), Expect = 3e-98 Identities = 337/387 (87%), Gaps = 3/387 (0%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 43445 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 43389 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 43388 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 43329 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 43328 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 43269 Query: 289 tccgctacatcgaccagcacaacgccgccgccgacgccggggtccactccttccgcctcg 348 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43268 tccggtacatcgacgagcacaacgccgccgccgacgccggggtccactccttccgcctcg 43209 Query: 349 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctacctcggcgccc 408 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 43208 gcctcaaccgcttcgccgacctcaccaacgaggagtaccgggacacctacctcggcctca 43149 Query: 409 gcactaagcccgaccgggagcggaagctcagcgccaggtaccaggccgccgacaacgacg 468 | | ||||| ||||| ||||| |||||| |||||||| |||||||||||||| | Sbjct: 43148 ggaacaagccgcggagggagaggaaggtcagcgacaggtacctcgccgccgacaacgagg 43089 Query: 469 agctgcccgagtccgtcgactggagga 495 |||||| |||||||| |||||||||| Sbjct: 43088 cgctgccggagtccgttgactggagga 43062 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 543 tgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagattgtcacaggcgac 602 |||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 41974 tgctgggctttctcagcaatagcagctgtagaaggcatcaaccagattgttactggcgac 41915 Query: 603 atgat 607 |||| Sbjct: 41914 ctgat 41910
>dbj|AK071619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100M05, full insert sequence Length = 1867 Score = 204 bits (103), Expect = 2e-49 Identities = 186/213 (87%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtgtcgctggcggcggcggcggacatgtcgatcgtgtcct 168 |||| |||||||||||| || |||||||||| ||||||| |||||||||||||||| | Sbjct: 91 cggccgcgctgctgctgctgctgtcgctggcagcggcgg---acatgtcgatcgtgtcgt 147 Query: 169 acggggagcggagcgaggaggaggtccggcggatgtacgccgagtggatggcggagcacg 228 |||||||| ||||||||||||||| |||||| ||||||| ||||||| ||| ||||||| Sbjct: 148 acggggagaggagcgaggaggaggcgcggcggctgtacgcggagtggaaggccgagcacg 207 Query: 229 gcagtacgtacaacgccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacc 288 ||| | ||||||||| |||||||||||||||| || | || ||||||| ||||||||| Sbjct: 208 gcaagagctacaacgccgtcggcgaggaggagcggcggtacgcggcgttcagggacaacc 267 Query: 289 tccgctacatcgaccagcacaacgccgccgccg 321 |||| ||||||||| |||||||||||||||||| Sbjct: 268 tccggtacatcgacgagcacaacgccgccgccg 300
>gb|AF019146.1|AF019146 Zea mays cysteine proteinase Mir2 (mir2) mRNA, complete cds Length = 1761 Score = 103 bits (52), Expect = 7e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| ||||||||||||||||||||| ||||||||| | || ||||| ||| Sbjct: 335 gaggtgttccgcgacaacctccgctacatcgacgcgcacaacgcggaggcggacgcgggg 394 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcac 373 ||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 395 ctccacggcttccgcctcggcctcacccgcttcgccgacctcac 438
>gb|DQ147253.1| Zea diploperennis isolate d8 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 221
>gb|DQ147249.1| Zea diploperennis isolate d4_116 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 221
>gb|DQ147248.1| Zea diploperennis isolate d4 cysteine protease Mir1 gene, partial cds Length = 1018 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 221
>gb|DQ147246.1| Zea diploperennis isolate d2 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 221
>gb|DQ147234.1| Zea mays subsp. parviglumis isolate p3 cysteine protease Mir1 (mir1) gene, partial cds Length = 1031 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 106 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 165 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 166 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 224
>gb|DQ147244.1| Zea mays subsp. parviglumis isolate p15 cysteine protease Mir1 (mir1) gene, partial cds Length = 1014 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 100 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 159 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 160 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 204
>gb|DQ147243.1| Zea mays subsp. parviglumis isolate p14 cysteine protease Mir1 (mir1) gene, partial cds Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 207
>gb|DQ147242.1| Zea mays subsp. parviglumis isolate p13 cysteine protease Mir1 (mir1) gene, partial cds Length = 994 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 207
>gb|DQ147241.1| Zea mays subsp. parviglumis isolate p12 cysteine protease Mir1 (mir1) gene, partial cds Length = 1006 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 207
>gb|DQ147240.1| Zea mays subsp. parviglumis isolate p11 cysteine protease Mir1 (mir1) gene, partial cds Length = 1038 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 109 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 168 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 169 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 213
>gb|DQ147238.1| Zea mays subsp. parviglumis isolate p8 cysteine protease Mir1 (mir1) gene, partial cds Length = 1036 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 109 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 168 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 169 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 213
>gb|DQ147236.1| Zea mays subsp. parviglumis isolate p5 cysteine protease Mir1 (mir1) gene, partial cds Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 100 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 159 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 160 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 204
>gb|DQ147235.1| Zea mays subsp. parviglumis isolate p4 cysteine protease Mir1 (mir1) gene, partial cds Length = 997 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 112 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 171 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 172 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 216
>gb|DQ147233.1| Zea mays subsp. parviglumis isolate p2 cysteine protease Mir1 (mir1) gene, partial cds Length = 987 Score = 97.6 bits (49), Expect = 4e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | || ||||| ||| Sbjct: 100 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggcggacgctggg 159 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 160 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 204
>gb|AF019145.2|AF019145 Zea mays cysteine protease Mir1 (mir1) mRNA, complete cds Length = 1463 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 311 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 370 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 371 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 429
>gb|DQ147252.1| Zea diploperennis isolate d7 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 221
>gb|DQ147250.1| Zea diploperennis isolate d5 cysteine protease Mir1 gene, partial cds Length = 1013 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 102 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 161 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 162 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 220
>gb|DQ147239.1| Zea mays subsp. parviglumis isolate p9 cysteine protease Mir1 (mir1) gene, partial cds Length = 1023 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 106 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 165 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 166 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 224
>gb|DQ147237.1| Zea mays subsp. parviglumis isolate p6 cysteine protease Mir1 (mir1) gene, partial cds Length = 1045 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 109 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 168 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| |||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 169 ctccacaccttccgcctcggcctcacccccttcgccgacctcaccctggaggagtaccg 227
>gb|DQ147251.1| Zea diploperennis isolate d6 cysteine protease Mir1 gene, partial cds Length = 1029 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 103 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 162 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 163 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 207
>gb|DQ147247.1| Zea diploperennis isolate d3 cysteine protease Mir1 gene, partial cds Length = 1015 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 106 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 165 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 166 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 210
>gb|DQ147245.1| Zea diploperennis isolate d1 cysteine protease Mir1 (mir1) gene, partial cds Length = 1019 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| ||||||||| | || ||||| ||| Sbjct: 106 gaggtgttccgcgacaaccttcggtacatcgacgcgcacaacgcggaggcggacgctggg 165 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 166 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 210
>gb|DQ147232.1| Zea mays subsp. parviglumis isolate p1 cysteine protease Mir1 (mir1) gene, partial cds Length = 1021 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgaccagcacaacgccgccgccgacgccggg 329 |||| |||||| |||||||| || ||||||||| |||||||||| | | ||||| ||| Sbjct: 106 gaggtgttccgcgacaaccttcggtacatcgacaagcacaacgcggaggtggacgctggg 165 Query: 330 gtccactccttccgcctcggcctcaaccgcttcgccgacctcacc 374 ||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 166 ctccacaccttccgcctcggcctcacccccttcgccgacctcacc 210
>gb|AY251055.1| Anthurium andraeanum senescence-associated cysteine protease mRNA, complete cds Length = 1703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgc 389 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 312 ctcggcctcacccgcttcgccgacctcaccaacgaggagtaccgc 356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 517 tcaaggaccagggcggctgtgggagctgctaggctttctcagcaatagcagctgtcgaag 576 ||||||| |||||||||||||||||||||| ||| ||||| | | || || || |||| Sbjct: 499 tcaaggatcagggcggctgtgggagctgctgggccttctccactgtggctgcagtggaag 558 Query: 577 gcatcaaccagat 589 ||||||||||||| Sbjct: 559 gcatcaaccagat 571 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 256 aggagcgccgcttcgaggcgttccgggacaacctccgctacatcgaccagcacaac 311 |||| |||||||||||| ||| ||||||||||||||||||||||| | |||||| Sbjct: 229 aggaacgccgcttcgagatcttctgggacaacctccgctacatcgacgaccacaac 284
>ref|XM_474296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | ||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 334 ttccgcctcgggatgaaccgcttcgccgacctcaccaacggcgagttccgcgccacctac 393 Query: 399 ctcggc 404 |||||| Sbjct: 394 ctcggc 399
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | ||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 151628 ttccgcctcgggatgaaccgcttcgccgacctcaccaacggcgagttccgcgccacctac 151687 Query: 399 ctcggc 404 |||||| Sbjct: 151688 ctcggc 151693 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 121527 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 121468 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 121467 ctcggcgcc 121459 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 121401 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 121342 Query: 528 ggc 530 ||| Sbjct: 121341 ggc 121339
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full insert sequence Length = 1722 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | ||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 445 ttccgcctcgggatgaaccgcttcgccgacctcaccaacggcgagttccgcgccacctac 504 Query: 399 ctcggc 404 |||||| Sbjct: 505 ctcggc 510
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | ||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 22885 ttccgcctcgggatgaaccgcttcgccgacctcaccaacggcgagttccgcgccacctac 22944 Query: 399 ctcggc 404 |||||| Sbjct: 22945 ctcggc 22950
>gb|AY700586.1| Zingiber officinale cysteine protease gp2b mRNA, complete cds Length = 1358 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 304 agcacaacgccgccgccgacgccggggtccactccttccgcctcggcctcaaccgcttcg 363 ||||||| || || |||||| ||||| ||| |||| |||||||| | ||||| |||| Sbjct: 278 agcacaatgcagcggccgaccgcggggagcacacctttcgcctcgggatgaaccggttcg 337 Query: 364 ccgacctcaccaacgaggagtaccg 388 ||||||||||||||||||||||||| Sbjct: 338 ccgacctcaccaacgaggagtaccg 362
>ref|XM_474291.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 292 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 351 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 352 ctcggcgcc 360 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 418 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 477 Query: 528 ggc 530 ||| Sbjct: 478 ggc 480
>dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E09, full insert sequence Length = 1766 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 396 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 455 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 456 ctcggcgcc 464 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 522 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 581 Query: 528 ggc 530 ||| Sbjct: 582 ggc 584
>dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H07, full insert sequence Length = 754 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 396 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 455 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 456 ctcggcgcc 464 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 522 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 581 Query: 528 ggc 530 ||| Sbjct: 582 ggc 584
>dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I21, full insert sequence Length = 1742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 372 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 431 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 432 ctcggcgcc 440 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 498 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 557 Query: 528 ggc 530 ||| Sbjct: 558 ggc 560
>gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, partial cds Length = 439 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 559 caatagcagctgtcgaaggcatcaaccagattgtcacaggcgacatgat 607 ||||||||||||| |||||||||||||||||||| || |||||| |||| Sbjct: 1 caatagcagctgtagaaggcatcaaccagattgttactggcgacctgat 49
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 60845 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 60786 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 60785 ctcggcgcc 60777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 60719 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 60660 Query: 528 ggc 530 ||| Sbjct: 60659 ggc 60657
>dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA for oryzain beta, complete cds Length = 1675 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcacctac 398 ||||||||||| | |||||||||||||| |||||||||||||||| |||| |||| | Sbjct: 308 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttc 367 Query: 399 ctcggcgcc 407 ||||||||| Sbjct: 368 ctcggcgcc 376 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 434 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 493 Query: 528 ggc 530 ||| Sbjct: 494 ggc 496
>gb|AY111799.1| Zea mays CL872_-2 mRNA sequence Length = 1761 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 338 cttccgcctcggcctcaaccgcttcgccgacctcac 373 ||||||||||||||||| |||||||||||||||||| Sbjct: 403 cttccgcctcggcctcacccgcttcgccgacctcac 438 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 270 gaggcgttccgggacaacctccgctacatcgac 302 |||| |||||| ||||||||||||||||||||| Sbjct: 335 gaggtgttccgcgacaacctccgctacatcgac 367
>gb|AY700585.1| Zingiber officinale cysteine protease gp2a mRNA, complete cds Length = 1359 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 354 aaccgcttcgccgacctcaccaacgaggagtaccg 388 ||||| ||||||||||||||||||||||||||||| Sbjct: 334 aaccggttcgccgacctcaccaacgaggagtaccg 368
>dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D09, full insert sequence Length = 1753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccag 527 |||||||| |||||||||||||||||| |||||||||| || | |||||||| ||||| Sbjct: 523 gagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccag 582 Query: 528 ggc 530 ||| Sbjct: 583 ggc 585 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 339 ttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 ||||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 397 ttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagt 442
>emb|X66061.1|PSTHIOL P.sativum mRNA for thiolprotease Length = 1820 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 532 gctgtgggagctgctaggctttctcagcaatagcagctgtcgaagg 577 |||||||||| || | ||| |||||||||||||||||||| ||||| Sbjct: 475 gctgtgggagttgttgggcattctcagcaatagcagctgtggaagg 520
>gb|AY106278.1| Zea mays PCO137999 mRNA sequence Length = 1382 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 338 cttccgcctcggcctcaaccgcttcgccgacctcaccaacgaggagtaccgcagcaccta 397 |||||||||||| | |||| |||||||||||||||||||| |||| |||| | | || Sbjct: 49 cttccgcctcgggatgaaccagttcgccgacctcaccaacgacgagttccgcgccgcgta 108 Query: 398 cctcggcgcc 407 |||||||||| Sbjct: 109 cctcggcgcc 118 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 468 gagctgcccgagtccgtcgactggaggaagaagggcgc 505 |||||||| ||| ||||||||||||| |||||||||| Sbjct: 185 gagctgccggagagcgtcgactggagggagaagggcgc 222
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence Length = 1422 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 464 cgacgagctgcccgagtccgtcgactggaggaagaagggcgc 505 ||||||| |||||| |||||| |||||| ||||||||||||| Sbjct: 481 cgacgaggtgcccgcgtccgtggactggcggaagaagggcgc 522
>gb|AY700588.1| Zingiber officinale cysteine protease gp3b mRNA, complete cds Length = 1575 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagtaccg 388 ||||| ||||||||||||||||||||||| Sbjct: 313 ttcgctgacctcaccaacgaggagtaccg 341
>gb|AY700587.1| Zingiber officinale cysteine protease gp3a mRNA, complete cds Length = 1597 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagtaccg 388 ||||| ||||||||||||||||||||||| Sbjct: 342 ttcgctgacctcaccaacgaggagtaccg 370
>gb|DQ123922.1| Coffea arabica x Coffea canephora clone HT-SSH1-B04 mRNA sequence Length = 364 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 532 gctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagattg 591 |||||||||| |||| ||| ||||||||| | || || || ||||| ||||||||||||| Sbjct: 209 gctgtgggagttgctgggccttctcagcagttgctgccgtggaagggatcaaccagattg 150 Query: 592 t 592 | Sbjct: 149 t 149
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 ||||||||||||||||||||||||| Sbjct: 3247850 ggcggcctcggcggcgctgctgctg 3247874 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 ctcggcctcaaccgcttcgccgacctca 372 ||||||||||| ||||||||||||||| Sbjct: 2311779 ctcggcctcaagggcttcgccgacctca 2311752
>gb|AY504967.1| Iris hollandica putative cysteine protease 2 (CYS2) mRNA, complete cds Length = 1282 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Plus Query: 514 ccgtcaaggaccagggcggctgtgggagctgctaggctttctcagcaatagcagctgtcg 573 ||||||||||||| ||| ||||||||||||| ||| ||||| ||||||| |||| | Sbjct: 425 ccgtcaaggaccaaggccagtgtgggagctgctgggcattctccacaatagcctctgtgg 484 Query: 574 aaggcatcaaccagat 589 | ||||||||| |||| Sbjct: 485 agggcatcaacaagat 500
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 123 ctgatggtgtcgctggcggcggcggcgg 150 |||||||||||| ||||||||||||||| Sbjct: 1256680 ctgatggtgtcgttggcggcggcggcgg 1256653
>ref|NM_185593.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2970 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 128 ggtgtcgctggcggcggcggcgg 150 ||||||||||||||||||||||| Sbjct: 459 ggtgtcgctggcggcggcggcgg 481
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggc 530 ||||||||||||||| |||||||||| || | |||||||||||||||| Sbjct: 577 tccgtcgactggaggcagaagggcgccgtcaccgacgtcaaggaccagggc 627
>dbj|AB252653.1| Platycodon grandiflorus PgCP1 mRNA for cysteine proteinase, complete cds Length = 1676 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 281 ggacaacctccgctacatcgaccagcacaacgccg 315 |||||| ||||||| ||||||| |||||||||||| Sbjct: 242 ggacaatctccgcttcatcgacgagcacaacgccg 276
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatggtg 131 ||||||||||||||||||||||| Sbjct: 11323664 cggcggcgctgctgctgatggtg 11323642 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 agcacaacgccgccgccgacgccg 327 |||||||||||||||||| ||||| Sbjct: 29063021 agcacaacgccgccgccgccgccg 29062998 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tggcggcggcggcggacatg 155 |||||||||||||||||||| Sbjct: 5288606 tggcggcggcggcggacatg 5288587 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggcggcgctgctgctgatgg 129 |||||||||||||||||||| Sbjct: 5059591 ggcggcgctgctgctgatgg 5059610 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 atggtgtcgctggcggcggcggcg 149 |||||||||| ||||||||||||| Sbjct: 2319264 atggtgtcgccggcggcggcggcg 2319241
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcgg 150 ||||||||||||||||||||||| Sbjct: 2982823 ggtgtcgctggcggcggcggcgg 2982801 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcggac 152 |||||||||||||||||||| |||| Sbjct: 1143158 ggtgtcgctggcggcggcggaggac 1143134 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcggac 152 |||||||||||||||||||| |||| Sbjct: 1128332 ggtgtcgctggcggcggcggaggac 1128308
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcgg 150 ||||||||||||||||||||||| Sbjct: 142969 ggtgtcgctggcggcggcggcgg 142947
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcgg 150 ||||||||||||||||||||||| Sbjct: 70772 ggtgtcgctggcggcggcggcgg 70750
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatggtg 131 ||||||||||||||||||||||| Sbjct: 24175 cggcggcgctgctgctgatggtg 24153
>dbj|AB177386.1| Dianthus caryophyllus DC-CP2 mRNA for cysteine proteinase, complete cds Length = 1564 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 532 gctgtgggagctgctaggctttctcagcaatagcagctgtcgaaggc 578 |||||||||| |||| ||| || |||||||||||||| || |||||| Sbjct: 467 gctgtgggagttgctgggcattttcagcaatagcagccgtagaaggc 513
>dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B09, full insert sequence Length = 4008 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 cggcggcgctgctgctgatggtg 131 ||||||||||||||||||||||| Sbjct: 541 cggcggcgctgctgctgatggtg 563
>dbj|AB034970.1| Melaleuca cajuputi DNA, microsatellite at the locus Eco-1 Length = 229 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcggcggcgg 150 ||||||||| ||||||||||||||||| Sbjct: 117 tgatggtgttgctggcggcggcggcgg 143
>ref|NM_119701.2| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.1 mRNA, complete cds Length = 1244 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 465 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 524 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 525 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 574
>ref|NM_202958.1| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.2 mRNA, complete cds Length = 1340 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 465 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 524 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 525 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 574
>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence Length = 129414 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 552 ttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||||||| | |||||||| |||||||||||| |||| Sbjct: 92675 ttctcagcagtggcagctgtagaaggcatcaacaagat 92638
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagtaccgc 389 ||||||||||||||| ||||||||| |||| Sbjct: 3660 ttcgccgacctcaccgacgaggagttccgc 3689
>emb|X99936.1|ZMSEE1 Z.mays mRNA for cysteine proteinase, See1 Length = 1412 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 ctccttccgcctcggcctcaaccgcttcgc 364 ||||| |||||||||| ||||||||||||| Sbjct: 356 ctcctaccgcctcggcatcaaccgcttcgc 385
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 gccgccgacaacgacgagctgc 474 |||||||||||||||||||||| Sbjct: 76386 gccgccgacaacgacgagctgc 76365
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 gccgccgacaacgacgagctgc 474 |||||||||||||||||||||| Sbjct: 80339 gccgccgacaacgacgagctgc 80318
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 453 gccgccgacaacgacgagctgc 474 |||||||||||||||||||||| Sbjct: 232597 gccgccgacaacgacgagctgc 232618
>gb|AF417109.1|AF417109 Carica candamarcensis cysteine proteinase precursor, mRNA, partial cds Length = 540 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 gacatgtcgatcgtgtcctacg 171 |||||||||||||||||||||| Sbjct: 153 gacatgtcgatcgtgtcctacg 174
>gb|AY244511.1| Triticum monococcum cultivar G2528 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagtaccgc 389 ||||||||||||||| ||||||||| |||| Sbjct: 671 ttcgccgacctcaccgacgaggagttccgc 642
>gb|AY244510.1| Triticum monococcum cultivar G1777 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagtaccgc 389 ||||||||||||||| ||||||||| |||| Sbjct: 671 ttcgccgacctcaccgacgaggagttccgc 642
>emb|BX828945.1|CNS0A2LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 452 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 511 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 512 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 561
>gb|BT005179.1| Arabidopsis thaliana clone U50467 unknown protein (At4g35350) mRNA, complete cds Length = 1099 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 418 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 477 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 478 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 527
>gb|AF191027.1|AF191027 Arabidopsis thaliana papain-type cysteine endopeptidase XCP1 mRNA, complete cds Length = 1214 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 418 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 477 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 478 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 527
>dbj|AK117394.1| Arabidopsis thaliana At4g35350 mRNA for putative cysteine proteinase, complete cds, clone: RAFL16-98-B02 Length = 1244 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 480 tccgtcgactggaggaagaagggcgcagttggtgccgtcaaggaccagggcggctgtggg 539 ||||| |||||||| ||||| ||||| || | | | |||||||||||||| ||||| Sbjct: 465 tccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccagggtcaatgtggt 524 Query: 540 agctgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagat 589 ||||| | ||| || ||| || | ||||||||||| || ||||||||||| Sbjct: 525 agctgttgggcattttcaacagttgcagctgtcgaggggatcaaccagat 574
>ref|XM_317286.2| Anopheles gambiae str. PEST ENSANGP00000006832 (ENSANGG00000005143), partial mRNA Length = 3216 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 catcgaccagcacaacgccgccgccg 321 |||||||||||||| ||||||||||| Sbjct: 853 catcgaccagcacaccgccgccgccg 828
>gb|AY106223.1| Zea mays PCO114759 mRNA sequence Length = 1532 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 ctccttccgcctcggcctcaaccgcttcgc 364 ||||| |||||||||| ||||||||||||| Sbjct: 378 ctcctaccgcctcggcatcaaccgcttcgc 407
>dbj|D45403.1|MZECYPA Corn mRNA for cysteine proteinase, clone CCP2, complete cds Length = 1382 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 ctccttccgcctcggcctcaaccgcttcgc 364 ||||| |||||||||| ||||||||||||| Sbjct: 345 ctcctaccgcctcggcatcaaccgcttcgc 374
>ref|NM_101938.2| Arabidopsis thaliana XCP2 (XYLEM CYSTEINE PEPTIDASE 2); cysteine-type peptidase/ peptidase AT1G20850 (XCP2) mRNA, complete cds Length = 1285 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 562 tagcagctgtcgaaggcatcaaccagattgtcacagg 598 |||||||||||||||| || ||| ||||||| ||||| Sbjct: 527 tagcagctgtcgaaggtataaacaagattgtgacagg 563
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 268 ttcgccgacctcaccaacgacgagt 292
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 271 ttcgccgacctcaccaacgacgagt 295
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 274 ttcgccgacctcaccaacgacgagt 298
>gb|AY336798.1| Rhipicephalus haemaphysaloides haemaphysaloides cathepsin L-like cysteine proteinase B (CysB) mRNA, complete cds Length = 1153 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 469 agctgcccgagtccgtcgactggaggaagaagggcgc 505 |||||||| || | ||||||||||||||||| ||||| Sbjct: 395 agctgcccaagactgtcgactggaggaagaaaggcgc 431
>ref|NM_184874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 331 cgctggcggcggcggcggaca 311
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 72467 cgctggcggcggcggcggaca 72447
>gb|AC093098.2| Drosophila melanogaster clone BACR29G22, complete sequence Length = 153749 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 55412 tggtggcgctggcggcggcggcgga 55436
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcgaggaggaggtccggcgga 201 ||||||||||||||||||||| Sbjct: 35742 gcgaggaggaggtccggcgga 35722
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 cgaccagcacaacgccgccgccgac 323 |||||||||| |||||||||||||| Sbjct: 3269694 cgaccagcaccacgccgccgccgac 3269670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 26761745 cgctggcggcggcggcggaca 26761765 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ggcggcggcggcggacatgt 156 |||||||||||||||||||| Sbjct: 26460962 ggcggcggcggcggacatgt 26460943 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 acaacgccgccgccgacgccgggg 330 |||||||||||||||||| ||||| Sbjct: 5427825 acaacgccgccgccgacgacgggg 5427848
>gb|BT011330.1| Drosophila melanogaster SD21550 full insert cDNA Length = 1815 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 1137 tggtggcgctggcggcggcggcgga 1113
>ref|XM_502282.1| Yarrowia lipolytica CLIB122, YALI0D01353g predicted mRNA Length = 2514 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 gctgctgatggtgtcgctggcggcggcgg 147 ||||||| |||||||||||||||| |||| Sbjct: 288 gctgctgctggtgtcgctggcggccgcgg 260
>gb|BT010018.1| Drosophila melanogaster RE15062 full insert cDNA Length = 2082 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 1412 tggtggcgctggcggcggcggcgga 1388
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gcggcctcggcggcgctgctg 122 ||||||||||||||||||||| Sbjct: 68169 gcggcctcggcggcgctgctg 68189
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 431 gaagctcagcgccaggtaccaggccgccgacaa 463 |||||| |||||||| |||||||||||| |||| Sbjct: 53371 gaagctgagcgccagataccaggccgcccacaa 53403
>emb|BX470126.27| Zebrafish DNA sequence from clone CH211-15L13 in linkage group 4 Contains a novel gene and seven CpG islands, complete sequence Length = 153182 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 tttctcagcaatagcagctgt 571 ||||||||||||||||||||| Sbjct: 139505 tttctcagcaatagcagctgt 139485
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ctggcggcctcggcggcgctg 119 ||||||||||||||||||||| Sbjct: 3039997 ctggcggcctcggcggcgctg 3040017
>emb|BX088697.9| Zebrafish DNA sequence from clone CH211-224C7 in linkage group 14, complete sequence Length = 198147 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 tttctcagcaatagcagctgt 571 ||||||||||||||||||||| Sbjct: 40903 tttctcagcaatagcagctgt 40923
>ref|NM_165827.1| Drosophila melanogaster CG13204-RB, transcript variant B (CG13204), mRNA Length = 1801 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 1144 tggtggcgctggcggcggcggcgga 1120
>ref|NM_136834.1| Drosophila melanogaster CG13204-RA, transcript variant A (CG13204), mRNA Length = 2070 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 1413 tggtggcgctggcggcggcggcgga 1389
>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin biosynthetic gene cluster, complete sequence Length = 95700 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 47309 tgatggtgtcgctggcggcgg 47329
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ggcctcggcggcgctgctgct 124 ||||||||||||||||||||| Sbjct: 1549238 ggcctcggcggcgctgctgct 1549258 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgctggcggcctcggcggcg 116 |||||||||||||||||||| Sbjct: 3995709 tgctggcggcctcggcggcg 3995728 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 atcgaccagcacaacgccgc 316 |||||||||||||||||||| Sbjct: 2726700 atcgaccagcacaacgccgc 2726681 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctgctgctgatggtgtcgctggcg 140 ||||||||||||||||||| |||| Sbjct: 2715776 ctgctgctgatggtgtcgccggcg 2715799
>emb|CR353641.1| Gallus gallus finished cDNA, clone ChEST933i14 Length = 957 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 474 cccgagtccgtcgactggaggaagaaggg 502 |||||| |||| ||||||||||||||||| Sbjct: 364 cccgaggccgtggactggaggaagaaggg 392
>gb|AF259983.1|AF259983 Ipomoea batatas putative cysteine protease mRNA, complete cds Length = 1751 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagtaccg 388 ||||| || |||||||||||||||||||| Sbjct: 322 ttcgctgatctcaccaacgaggagtaccg 350
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 |||||| |||||||||||||||||| Sbjct: 26190443 ggcggcgtcggcggcgctgctgctg 26190467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcgg 150 ||||||||||||||||||||| Sbjct: 23444393 tgtcgctggcggcggcggcgg 23444373
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcgaggaggaggtccggcgga 201 ||||||||||||||||||||| Sbjct: 2166513 gcgaggaggaggtccggcgga 2166493
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 26853068 cgctggcggcggcggcggaca 26853088 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ggcggcggcggcggacatgt 156 |||||||||||||||||||| Sbjct: 26552271 ggcggcggcggcggacatgt 26552252 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 acaacgccgccgccgacgccgggg 330 |||||||||||||||||| ||||| Sbjct: 5427040 acaacgccgccgccgacgacgggg 5427063
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 27041932 cgctggcggcggcggcggaca 27041952
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 13831711 ttcgccgacctcaccaacgacgagt 13831687 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 13825545 ttcgccgacctcaccaacgacgagt 13825569 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 6396027 ttcgccgacctcaccaacgacgagt 6396003 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 ||||||||||||| ||| ||||||||||| |||| |||| Sbjct: 24340991 ctcggcctcaaccagttctccgacctcaccgacgacgagt 24340952 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 1395105 tgatggtgacgctggcggcggcgg 1395128 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 1381018 tgatggtgacgctggcggcggcgg 1380995
>dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes for type I polyketide synthase, type I polyketide synthase, type I polyketide synthase, complete and partial cds Length = 45102 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 2816 tgatggtgtcgctggcggcgg 2836
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 3579479 tgatggtgtcgctggcggcgg 3579459 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 3574895 tgatggtgtcgctggcggcgg 3574875 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 3570335 tgatggtgtcgctggcggcgg 3570315 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 3565348 tgatggtgtcgctggcggcgg 3565328 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcctcggcggcgctgctgctg 125 ||||||||||||||||||||| Sbjct: 1537273 gcctcggcggcgctgctgctg 1537293 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cgagctgcccgagtccgtcg 486 |||||||||||||||||||| Sbjct: 8587785 cgagctgcccgagtccgtcg 8587804 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcg 143 |||||||||||||||||||| Sbjct: 3544087 tgatggtgtcgctggcggcg 3544106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcg 143 |||||||||||||||||||| Sbjct: 2888569 tgatggtgtcgctggcggcg 2888550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcg 143 |||||||||||||||||||| Sbjct: 2883220 tgatggtgtcgctggcggcg 2883201
>gb|BT004822.1| Arabidopsis thaliana At1g20850 gene, complete cds Length = 1071 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 562 tagcagctgtcgaaggcatcaaccagattgtcacagg 598 |||||||||||||||| || ||| ||||||| ||||| Sbjct: 503 tagcagctgtcgaaggtataaacaagattgtgacagg 539
>gb|AF191028.1|AF191028 Arabidopsis thaliana papain-type cysteine endopeptidase XCP2 mRNA, complete cds Length = 1219 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 562 tagcagctgtcgaaggcatcaaccagattgtcacagg 598 |||||||||||||||| || ||| ||||||| ||||| Sbjct: 508 tagcagctgtcgaaggtataaacaagattgtgacagg 544
>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I, complete sequence Length = 143879 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 562 tagcagctgtcgaaggcatcaaccagattgtcacagg 598 |||||||||||||||| || ||| ||||||| ||||| Sbjct: 143253 tagcagctgtcgaaggtataaacaagattgtgacagg 143289
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 18422 ttcgccgacctcaccaacgacgagt 18398
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 167093 ttcgccgacctcaccaacgacgagt 167069
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcggac 152 |||||||||||||||||||| |||| Sbjct: 119381 ggtgtcgctggcggcggcggaggac 119357 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcggcggac 152 |||||||||||||||||||| |||| Sbjct: 104555 ggtgtcgctggcggcggcggaggac 104531
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 69114 ttcgccgacctcaccaacgacgagt 69090 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 |||||||||||||||||||| |||| Sbjct: 62948 ttcgccgacctcaccaacgacgagt 62972
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 13581 cgctggcggcggcggcggaca 13601
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 95134 cgctggcggcggcggcggaca 95154
>dbj|AK120141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028D07, full insert sequence Length = 2904 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 2473 cgctggcggcggcggcggaca 2453
>dbj|AK106830.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F07, full insert sequence Length = 1132 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 |||||| |||||||||||||||||| Sbjct: 758 ggcggcgtcggcggcgctgctgctg 782
>dbj|AK073914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N24, full insert sequence Length = 3037 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgctggcggcggcggcggaca 153 ||||||||||||||||||||| Sbjct: 2603 cgctggcggcggcggcggaca 2583
>dbj|AK068276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136G04, full insert sequence Length = 1027 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcgg 150 ||||||||||||||||||||| Sbjct: 700 tgtcgctggcggcggcggcgg 680
>dbj|AK064715.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D11, full insert sequence Length = 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ggtgtcgctggcggcggcggcggac 152 |||||||||||||||||||| |||| Sbjct: 478 ggtgtcgctggcggcggcggaggac 502
>gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24 of 73 of the complete sequence Length = 310108 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 tggtgtcgctggcggcggcggcgga 151 ||||| ||||||||||||||||||| Sbjct: 214370 tggtggcgctggcggcggcggcgga 214346
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttcgccgacctcaccaacgaggagt 384 ||||||||||||||| ||||||||| Sbjct: 313 ttcgccgacctcacccacgaggagt 337
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 |||||| |||||||||||||||||| Sbjct: 26118619 ggcggcgtcggcggcgctgctgctg 26118643 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcgg 150 ||||||||||||||||||||| Sbjct: 23372584 tgtcgctggcggcggcggcgg 23372564
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 tgtcgctggcggcggcggcgg 150 ||||||||||||||||||||| Sbjct: 57766 tgtcgctggcggcggcggcgg 57786
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 |||||| |||||||||||||||||| Sbjct: 80681 ggcggcgtcggcggcgctgctgctg 80705
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 gctgctgatggtgtcgctggcggcggcgg 147 ||||||| |||||||||||||||| |||| Sbjct: 155074 gctgctgctggtgtcgctggcggccgcgg 155046
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 562 tagcagctgtcgaaggcatcaaccagattgtcacagg 598 |||||||||||||||| || ||| ||||||| ||||| Sbjct: 95076 tagcagctgtcgaaggtataaacaagattgtgacagg 95040
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 72457 tgatggtgtcgctggcggcgg 72477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 67470 tgatggtgtcgctggcggcgg 67490 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 62910 tgatggtgtcgctggcggcgg 62930 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcgg 144 ||||||||||||||||||||| Sbjct: 58326 tgatggtgtcgctggcggcgg 58346 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcg 143 |||||||||||||||||||| Sbjct: 93718 tgatggtgtcgctggcggcg 93699
>dbj|AB071808.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF8, partial cds Length = 1403 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgctgctg 125 |||||| |||||||||||||||||| Sbjct: 949 ggcggcgtcggcggcgctgctgctg 973
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ggcggcggcggcggacatgt 156 |||||||||||||||||||| Sbjct: 109002 ggcggcggcggcggacatgt 108983
>ref|NM_100508.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G06260 mRNA, complete cds Length = 1032 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 543 tgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagatt 590 |||| ||| ||||| ||| |||||||| | |||||||||||| ||||| Sbjct: 451 tgctgggcattctctgcagtagcagctattgaaggcatcaacaagatt 498
>ref|NM_001035421.1| Bos taurus potassium channel tetramerisation domain containing 11 (KCTD11), mRNA Length = 2609 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 cagggcggctgtgggagctg 544 |||||||||||||||||||| Sbjct: 839 cagggcggctgtgggagctg 820
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cggagcgaggaggaggtccg 196 |||||||||||||||||||| Sbjct: 1980885 cggagcgaggaggaggtccg 1980904
>ref|XM_549986.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 880 tgatggtgacgctggcggcggcgg 857
>ref|XM_549987.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 1030 tgatggtgacgctggcggcggcgg 1007
>ref|XM_480420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 423 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 325 cgccgccgccgacgccgggg 306
>ref|XM_474825.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaa 376 |||||| |||||| ||||||||||||||||| Sbjct: 238 ctcggcgtcaaccagttcgccgacctcaccaa 269
>ref|NM_197751.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein hox1 (OSJNBb0089A17.12), mRNA Length = 936 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 441 gtcgctggcggcggcggcgg 422
>ref|NM_192771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 ||||||||||||| ||| ||||||||||| |||| |||| Sbjct: 262 ctcggcctcaaccagttctccgacctcaccgacgacgagt 301
>ref|XM_469267.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ggcggcggcggcggacatgt 156 |||||||||||||||||||| Sbjct: 309 ggcggcggcggcggacatgt 328
>ref|XM_479587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2104 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 agcacaacgccgccgccgacgccg 327 |||||||||||||||||| ||||| Sbjct: 1563 agcacaacgccgccgccgccgccg 1586
>ref|NM_186285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 atggtgtcgctggcggcggcggcg 149 |||||||||| ||||||||||||| Sbjct: 251 atggtgtcgccggcggcggcggcg 228
>ref|XM_473085.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 216 cgccgccgccgacgccgggg 235
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcg 143 |||||||||||||||||||| Sbjct: 72733 tgatggtgtcgctggcggcg 72752
>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence Length = 171000 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gctgctgctgatggtgtcgctggc 139 ||||||||||||||||| |||||| Sbjct: 21941 gctgctgctgatggtgttgctggc 21964
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cggcgctgctgctgatggtg 131 |||||||||||||||||||| Sbjct: 1083513 cggcgctgctgctgatggtg 1083494
>gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcggcctcggcggcgctgct 121 |||||||||||||||||||| Sbjct: 18406 gcggcctcggcggcgctgct 18387
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 tcgaaggcatcaaccagatt 590 |||||||||||||||||||| Sbjct: 3749481 tcgaaggcatcaaccagatt 3749462
>ref|XM_656916.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4404.2), mRNA Length = 1347 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cggcgctgctgctgatggtg 131 |||||||||||||||||||| Sbjct: 141 cggcgctgctgctgatggtg 160
>ref|NM_213272.1| Danio rerio zgc:77377 (zgc:77377), mRNA Length = 3862 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gctggcggcggcggcggaca 153 |||||||||||||||||||| Sbjct: 448 gctggcggcggcggcggaca 467
>gb|AY566280.1| Takifugu rubripes forkhead box protein K1 isoform gamma (foxk1) mRNA, partial cds, alternatively spliced Length = 1868 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccactccttccgcctcggcc 351 |||||||||||||||||||| Sbjct: 521 ccactccttccgcctcggcc 540
>gb|AY566279.1| Takifugu rubripes forkhead box protein K1 isoform beta (foxk1) mRNA, partial cds, alternatively spliced Length = 2105 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccactccttccgcctcggcc 351 |||||||||||||||||||| Sbjct: 521 ccactccttccgcctcggcc 540
>gb|AY566278.1| Takifugu rubripes forkhead box protein K1 isoform alpha (foxk1) mRNA, partial cds, alternatively spliced Length = 1676 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccactccttccgcctcggcc 351 |||||||||||||||||||| Sbjct: 521 ccactccttccgcctcggcc 540
>gb|AC113495.15| Mus musculus chromosome 9, clone RP23-361O11, complete sequence Length = 195356 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 102229 gtcgctggcggcggcggcgg 102210
>ref|XM_983854.1| PREDICTED: Mus musculus doublecortin and CaM kinase-like 3 (Dcamkl3), mRNA Length = 2437 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 228 gtcgctggcggcggcggcgg 209
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcggaca 153 ||||||||||||||||| |||||| Sbjct: 25523 tgtcgctggcggcggcgccggaca 25500
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcggaca 153 ||||||||||||||||| |||||| Sbjct: 24358 tgtcgctggcggcggcgccggaca 24335
>ref|XM_539995.2| PREDICTED: Canis familiaris similar to dual specificity phosphatase 4 (LOC482880), mRNA Length = 2600 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gctggcggcctcggcggcgc 117 |||||||||||||||||||| Sbjct: 1284 gctggcggcctcggcggcgc 1265
>ref|XM_546631.2| PREDICTED: Canis familiaris similar to heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1 (LOC489512), mRNA Length = 1246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggcctcggcggcgctgctgc 123 |||||||||||||||||||| Sbjct: 423 ggcctcggcggcgctgctgc 404
>gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete sequence Length = 135684 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gcggcctcggcggcgctgct 121 |||||||||||||||||||| Sbjct: 32739 gcggcctcggcggcgctgct 32758
>ref|XM_533672.2| PREDICTED: Canis familiaris similar to translocase of inner mitochondrial membrane 50 homolog (LOC476461), mRNA Length = 1665 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tggcggcctcggcggcgctg 119 |||||||||||||||||||| Sbjct: 2 tggcggcctcggcggcgctg 21
>gb|AY060699.1| Drosophila melanogaster GH14092 full insert cDNA Length = 2865 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gctgctgctgatggtgtcgctggc 139 ||||||||||||||||| |||||| Sbjct: 1992 gctgctgctgatggtgttgctggc 1969
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 acaacgccgccgccgacgccgggg 330 |||||||||||||||||| ||||| Sbjct: 133993 acaacgccgccgccgacgacgggg 134016
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tgctggcggcctcggcggcgctgc 120 |||| ||||||||||||||||||| Sbjct: 887717 tgctcgcggcctcggcggcgctgc 887740
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 atcgaccagcacaacgccgc 316 |||||||||||||||||||| Sbjct: 3428189 atcgaccagcacaacgccgc 3428208
>gb|AY342388.1| Caenorhabditis elegans putative RNA-binding protein (unc-75) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 ccagcacaacgccgccgccg 321 |||||||||||||||||||| Sbjct: 1182 ccagcacaacgccgccgccg 1201
>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0033E08, complete sequence Length = 149241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggcggcgctgctgctgatgg 129 |||||||||||||||||||| Sbjct: 66524 ggcggcgctgctgctgatgg 66543
>gb|BC053714.1| Mus musculus cDNA clone IMAGE:30032035, partial cds Length = 2216 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gctggcggcggcggcggaca 153 |||||||||||||||||||| Sbjct: 1995 gctggcggcggcggcggaca 2014
>ref|XM_963896.1| PREDICTED: Tribolium castaneum similar to CG13467-PA (LOC657436), mRNA Length = 705 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 163 cgccgccgccgacgccgggg 144
>emb|X96681.2|OSHOX1 Oryza sativa mRNA for DNA-binding protein (Oshox1 gene) Length = 1332 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 514 gtcgctggcggcggcggcgg 495
>gb|BC068186.1| Danio rerio zgc:77377, mRNA (cDNA clone MGC:77377 IMAGE:6969157), complete cds Length = 3862 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gctggcggcggcggcggaca 153 |||||||||||||||||||| Sbjct: 448 gctggcggcggcggcggaca 467
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cggcgctgctgctgatggtg 131 |||||||||||||||||||| Sbjct: 49713 cggcgctgctgctgatggtg 49694
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cggcgctgctgctgatggtg 131 |||||||||||||||||||| Sbjct: 96939 cggcgctgctgctgatggtg 96920
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cggcctcggcggcgctgctg 122 |||||||||||||||||||| Sbjct: 91261 cggcctcggcggcgctgctg 91280
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 44993 cgccgccgccgacgccgggg 45012
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaa 376 |||||| |||||| ||||||||||||||||| Sbjct: 133995 ctcggcgtcaaccagttcgccgacctcaccaa 134026
>emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease (pCYSPROT gene) Length = 412 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 catcaaccagattgtcacaggcga 601 |||||||||||||||||| ||||| Sbjct: 1 catcaaccagattgtcactggcga 24
>gb|BC041883.1| Homo sapiens cDNA clone IMAGE:5298232 Length = 1189 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gcggcctcggcggcgctgct 121 |||||||||||||||||||| Sbjct: 152 gcggcctcggcggcgctgct 171
>gb|DQ118575.1| Isochrysis galbana isolate 13 chloroplast light harvesting protein isoform 3 mRNA, complete cds; nuclear gene for chloroplast product Length = 718 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ggcggcctcggcggcgctgc 120 |||||||||||||||||||| Sbjct: 607 ggcggcctcggcggcgctgc 626
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence Length = 189479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 cagggcggctgtgggagctg 544 |||||||||||||||||||| Sbjct: 146185 cagggcggctgtgggagctg 146166
>gb|DQ116386.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA, complete cds Length = 1937 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tggcggcggcggcggacatg 155 |||||||||||||||||||| Sbjct: 135 tggcggcggcggcggacatg 116
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cggcggcgctgctgctgatg 128 |||||||||||||||||||| Sbjct: 62269 cggcggcgctgctgctgatg 62250
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgctggcggcctcggcggcg 116 |||||||||||||||||||| Sbjct: 4554481 tgctggcggcctcggcggcg 4554500
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggctctgctggcggcctcgg 111 |||||||||||||||||||| Sbjct: 1603585 ggctctgctggcggcctcgg 1603604
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 acaacgccgccgccgacgccgggg 330 |||||||||||||||||| ||||| Sbjct: 24419 acaacgccgccgccgacgacgggg 24442
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ggaccagggcggctgtggga 540 |||||||||||||||||||| Sbjct: 92165 ggaccagggcggctgtggga 92146
>ref|NM_134787.2| Drosophila melanogaster CG31670-PA (CG31670) mRNA, complete cds Length = 2851 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gctgctgctgatggtgtcgctggc 139 ||||||||||||||||| |||||| Sbjct: 1992 gctgctgctgatggtgttgctggc 1969
>dbj|AB074972.2| Oryza sativa (japonica cultivar-group) OsEIL2 mRNA for ethylene-insensitive-3-like protein, complete cds Length = 1934 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 agcacaacgccgccgccgacgccg 327 |||||||||||||||||| ||||| Sbjct: 1502 agcacaacgccgccgccgccgccg 1525
>dbj|AK135010.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430541I17 product:hypothetical Doublecortin/Protein kinase-like containing protein, full insert sequence Length = 3484 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 217 gtcgctggcggcggcggcgg 198
>gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22C-22C, BAC clone BACR11F10, complete sequence Length = 175115 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gctgctgctgatggtgtcgctggc 139 ||||||||||||||||| |||||| Sbjct: 31515 gctgctgctgatggtgttgctggc 31492
>gb|AY069788.1| Drosophila melanogaster SD02996 full length cDNA Length = 7107 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gctgctgctgatggtgtcgctggc 139 |||||||||| ||||||||||||| Sbjct: 460 gctgctgctgctggtgtcgctggc 437
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgtcgctggcggcggcggcggaca 153 ||||||||||||||||| |||||| Sbjct: 24762 tgtcgctggcggcggcgccggaca 24739
>gb|AC161113.2| Mus musculus BAC clone RP24-362N9 from chromosome 9, complete sequence Length = 171642 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 37019 gtcgctggcggcggcggcgg 37000
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 65611 gtcgctggcggcggcggcgg 65592
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcggcggcgctgctgctgat 127 |||||||||||||||||||| Sbjct: 2008499 tcggcggcgctgctgctgat 2008480
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccagcacaacgccgccgccg 321 |||||||||||||||||||| Sbjct: 156557 ccagcacaacgccgccgccg 156538
>dbj|AK012921.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810047M21 product:ODAG PROTEIN homolog [Mus musculus], full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 gccgccgccgacgccggggtccac 335 |||||||||| ||||||||||||| Sbjct: 25 gccgccgccgccgccggggtccac 2
>dbj|AK050312.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730036H08 product:hypothetical Eukaryotic protein kinase containing protein, full insert sequence Length = 2968 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 197 gtcgctggcggcggcggcgg 178
>ref|NM_060557.3| Caenorhabditis elegans UNCoordinated family member (unc-75) (unc-75) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 ccagcacaacgccgccgccg 321 |||||||||||||||||||| Sbjct: 1182 ccagcacaacgccgccgccg 1201
>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence Length = 193960 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 cagggcggctgtgggagctg 544 |||||||||||||||||||| Sbjct: 20615 cagggcggctgtgggagctg 20596
>gb|AF372832.1|AF372832 Oryza sativa hexokinase II mRNA, complete cds Length = 1904 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tggcggcggcggcggacatg 155 |||||||||||||||||||| Sbjct: 69 tggcggcggcggcggacatg 50
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggcggcgctgctgctgatgg 129 |||||||||||||||||||| Sbjct: 5730967 ggcggcgctgctgctgatgg 5730986
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 21633707 gtcgctggcggcggcggcgg 21633688
>gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, region 22A-22B, BAC clone BACR18A24, complete sequence Length = 160551 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gctgctgctgatggtgtcgctggc 139 ||||||||||||||||| |||||| Sbjct: 139730 gctgctgctgatggtgttgctggc 139753
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 |||||||||||| ||| ||||||||||| ||||||||| Sbjct: 22137822 ctcggcctcaacaagttctccgacctcacctacgaggagt 22137783
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.3 Identities = 59/72 (81%) Strand = Plus / Minus Query: 244 ccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacctccgctacatcgacc 303 |||||| |||||||||| |||| | || || |||| |||| | || |||| | |||||| Sbjct: 9495570 ccatcgccgaggaggagtgccggtacgcggtgttcagggagacccgccgcgccgtcgacc 9495511 Query: 304 agcacaacgccg 315 |||||||||||| Sbjct: 9495510 agcacaacgccg 9495499 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 5026632 cgccgccgccgacgccgggg 5026613
>dbj|AB029373.1| Thermus thermophilus genes for DNA-3-methyladenine glycosidase, ORF, 5,10-methylenetetrahydrofolate reductase, partial and complete cds Length = 1861 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 gcctcggcctcaaccgcttcgccgacctcacc 374 ||||||||||||||| | ||||| |||||||| Sbjct: 1380 gcctcggcctcaaccccctcgcccacctcacc 1411
>gb|AC017080.8| Homo sapiens BAC clone RP11-469G4 from 2, complete sequence Length = 184012 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 aggaccagggcggctgtggg 539 |||||||||||||||||||| Sbjct: 157506 aggaccagggcggctgtggg 157487
>gb|AY973616.1| Manihot esculenta cysteine protease CP1 mRNA, complete cds Length = 1831 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 gacctcaccaacgaggagtaccgc 389 ||||| |||||||||||||||||| Sbjct: 342 gaccttaccaacgaggagtaccgc 365
>ref|XM_238042.3| PREDICTED: Rattus norvegicus similar to hedgehog-interacting protein (LOC291936), mRNA Length = 4560 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gggagcggagcgaggaggag 191 |||||||||||||||||||| Sbjct: 586 gggagcggagcgaggaggag 605
>gb|AC009531.11|AC009531 Homo sapiens chromosome 7 clone RP11-178P2, complete sequence Length = 168799 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggtgtcgctggcggcggcgg 147 |||||||||||||||||||| Sbjct: 48018 ggtgtcgctggcggcggcgg 48037
>gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 48872 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 543 tgctaggctttctcagcaatagcagctgtcgaaggcatcaaccagatt 590 |||| ||| ||||| ||| |||||||| | |||||||||||| ||||| Sbjct: 42035 tgctgggcattctctgcagtagcagctattgaaggcatcaacaagatt 42082
>gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15, complete sequence Length = 177585 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggtgtcgctggcggcggcgg 147 |||||||||||||||||||| Sbjct: 160218 ggtgtcgctggcggcggcgg 160237
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgccgccgacgccgggg 330 |||||||||||||||||||| Sbjct: 64189 cgccgccgccgacgccgggg 64170
>gb|AC007076.3|AC007076 Homo sapiens PAC clone RP4-698F7 from 7p15.1-p13, complete sequence Length = 95477 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggtgtcgctggcggcggcgg 147 |||||||||||||||||||| Sbjct: 88211 ggtgtcgctggcggcggcgg 88192
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 gcctcggcctcaaccgcttcgccgacctcacc 374 ||||||||||||||| | ||||| |||||||| Sbjct: 314877 gcctcggcctcaaccccctcgcccacctcacc 314846
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 |||||||||||| ||| ||||||||||| ||||||||| Sbjct: 59315 ctcggcctcaacaagttctccgacctcacctacgaggagt 59276
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 ||||||||||||| ||| ||||||||||| |||| |||| Sbjct: 86895 ctcggcctcaaccagttctccgacctcaccgacgacgagt 86856
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 93156 tgatggtgacgctggcggcggcgg 93179 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 tgatggtgtcgctggcggcggcgg 147 |||||||| ||||||||||||||| Sbjct: 79069 tgatggtgacgctggcggcggcgg 79046
>dbj|AB097904.1| Streptomyces carzinostaticus DNA, biosynthetic gene cluster for antitumor antibiotic Neocarzilin, complete and partial cds Length = 33079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gcacctacctcggcgcccgc 410 |||||||||||||||||||| Sbjct: 1289 gcacctacctcggcgcccgc 1308
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggcggcgctgctgctgatgg 129 |||||||||||||||||||| Sbjct: 101280 ggcggcgctgctgctgatgg 101299
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 atggtgtcgctggcggcggcggcg 149 |||||||||| ||||||||||||| Sbjct: 22272 atggtgtcgccggcggcggcggcg 22249
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggcggcgctgctgctgatgg 129 |||||||||||||||||||| Sbjct: 15758 ggcggcgctgctgctgatgg 15777
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tggcggcggcggcggacatg 155 |||||||||||||||||||| Sbjct: 22970 tggcggcggcggcggacatg 22951
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tggcggcggcggcggacatg 155 |||||||||||||||||||| Sbjct: 87369 tggcggcggcggcggacatg 87350
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 agcacaacgccgccgccgacgccg 327 |||||||||||||||||| ||||| Sbjct: 10978 agcacaacgccgccgccgccgccg 10955
>dbj|AK121042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I24, full insert sequence Length = 3060 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 acaacgccgccgccgacgccgggg 330 |||||||||||||||||| ||||| Sbjct: 1450 acaacgccgccgccgacgacgggg 1473
>gb|BT021640.1| Bos taurus potassium channel tetramerisation domain containing 11 (KCTD11), mRNA, complete cds Length = 2609 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 cagggcggctgtgggagctg 544 |||||||||||||||||||| Sbjct: 839 cagggcggctgtgggagctg 820
>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0005L24 Length = 155365 Score = 40.1 bits (20), Expect = 8.3 Identities = 59/72 (81%) Strand = Plus / Minus Query: 244 ccatcggcgaggaggagcgccgcttcgaggcgttccgggacaacctccgctacatcgacc 303 |||||| |||||||||| |||| | || || |||| |||| | || |||| | |||||| Sbjct: 25600 ccatcgccgaggaggagtgccggtacgcggtgttcagggagacccgccgcgccgtcgacc 25541 Query: 304 agcacaacgccg 315 |||||||||||| Sbjct: 25540 agcacaacgccg 25529
>emb|Y14681.1|AVPTSP Azotobacter vinelandii ptsP gene Length = 3000 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 cctcggcggcgctgctgctgatgg 129 ||||||||||| |||||||||||| Sbjct: 2292 cctcggcggcggtgctgctgatgg 2315
>dbj|AK109228.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-E12, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ggcggcggcggcggacatgt 156 |||||||||||||||||||| Sbjct: 393 ggcggcggcggcggacatgt 412
>gb|AF211193.1|AF211193 Oryza sativa homeodomain-leucine zipper transcription factor (Hox1) gene, complete cds Length = 3108 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcgctggcggcggcggcgg 150 |||||||||||||||||||| Sbjct: 2125 gtcgctggcggcggcggcgg 2106
>dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F12, full insert sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 345 ctcggcctcaaccgcttcgccgacctcaccaacgaggagt 384 ||||||||||||| ||| ||||||||||| |||| |||| Sbjct: 294 ctcggcctcaaccagttctccgacctcaccgacgacgagt 333
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cggcgctgctgctgatggtg 131 |||||||||||||||||||| Sbjct: 1592283 cggcgctgctgctgatggtg 1592264 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,454,393 Number of Sequences: 3902068 Number of extensions: 5454393 Number of successful extensions: 281775 Number of sequences better than 10.0: 273 Number of HSP's better than 10.0 without gapping: 280 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 262526 Number of HSP's gapped (non-prelim): 19229 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
