ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart38b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial p... 209 4e-54
2CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial p... 206 4e-53
3CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial pr... 148 1e-35
4CY1_BOVIN (P00125) Cytochrome c1, heme protein, mitochondrial (C... 145 1e-34
5CY1_HUMAN (P08574) Cytochrome c1, heme protein, mitochondrial pr... 145 1e-34
6CY1_YEAST (P07143) Cytochrome c1, heme protein, mitochondrial pr... 124 2e-28
7CY1_KLULA (Q00988) Cytochrome c1, heme protein, mitochondrial pr... 123 5e-28
8CY1_NEUCR (P07142) Cytochrome c1, heme protein, mitochondrial pr... 119 7e-27
9CYBC_BRAJA (P51131) Cytochrome b/c1 [Contains: Cytochrome b; Cyt... 96 6e-20
10CY1_RHORU (P23135) Cytochrome c1 precursor 94 2e-19
11CY1_EUGGR (P20114) Cytochrome c1, heme protein 87 4e-17
12CY1_RHOVI (P81379) Cytochrome c1 precursor 67 3e-11
13CY1_RHOSH (Q02760) Cytochrome c1 precursor 53 6e-07
14CY1_PARDE (P13627) Cytochrome c1 precursor 51 3e-06
15CY1_RHOCA (P08501) Cytochrome c1 precursor 49 1e-05
16QCRC_MYCTU (P63887) Ubiquinol-cytochrome c reductase cytochrome ... 35 0.17
17QCRC_MYCBO (P63888) Ubiquinol-cytochrome c reductase cytochrome ... 35 0.17
18QCRC_MYCLE (O69583) Ubiquinol-cytochrome c reductase cytochrome ... 35 0.22
19CY1_CHRVI (O31216) Cytochrome c1 precursor 31 3.2
20SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding fact... 31 3.2
21MOAE_RHILO (Q984P0) Molybdopterin-converting factor subunit 2 (M... 30 5.4
22SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,... 30 5.4
23LAP2_MOUSE (Q80TH2) LAP2 protein (Erbb2-interacting protein) (Er... 30 7.0
24MIAA_STAAW (P65356) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0
25MIAA_STAAS (Q6G9R0) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0
26MIAA_STAAR (Q6GHD2) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0
27MIAA_STAAN (P65355) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0
28MIAA_STAAM (P65354) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0
29MIAA_STAAC (Q5HGC9) tRNA delta(2)-isopentenylpyrophosphate trans... 30 7.0

>CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC18I) (Fragment)
          Length = 260

 Score =  209 bits (533), Expect = 4e-54
 Identities = 98/107 (91%), Positives = 100/107 (93%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 451
           F T+ASADEAEHGL    YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL+SYRDL
Sbjct: 11  FATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSYRDL 70

Query: 452 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNE 592
           VGVAYTEEE KAMAAEIEV DGPNDEGEMFTRPGKLSDRFPQPYPNE
Sbjct: 71  VGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNE 117



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>CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC13III)
          Length = 320

 Score =  206 bits (524), Expect = 4e-53
 Identities = 98/107 (91%), Positives = 99/107 (92%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 451
           F TIA +DEAEHGL    YPWPH GILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL
Sbjct: 71  FATIAYSDEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 130

Query: 452 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNE 592
           VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPY NE
Sbjct: 131 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANE 177



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>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor|
           (Cytochrome c-1)
          Length = 325

 Score =  148 bits (373), Expect = 1e-35
 Identities = 69/103 (66%), Positives = 80/103 (77%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 466
           SA + E  L    YPW H G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR LVGV Y
Sbjct: 83  SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCY 140

Query: 467 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           TEEE KA+A E+EV DGPND+GEMF RPGKLSD FP+PYPN +
Sbjct: 141 TEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPE 183



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>CY1_BOVIN (P00125) Cytochrome c1, heme protein, mitochondrial (Cytochrome|
           c-1)
          Length = 241

 Score =  145 bits (365), Expect = 1e-34
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = +2

Query: 326 YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIE 505
           YPW H G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR LVGV YTE+E KA+A E+E
Sbjct: 10  YPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDEAKALAEEVE 69

Query: 506 VVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           V DGPN++GEMF RPGKLSD FP+PYPN +
Sbjct: 70  VQDGPNEDGEMFMRPGKLSDYFPKPYPNPE 99



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>CY1_HUMAN (P08574) Cytochrome c1, heme protein, mitochondrial precursor|
           (Cytochrome c-1)
          Length = 325

 Score =  145 bits (365), Expect = 1e-34
 Identities = 67/103 (65%), Positives = 79/103 (76%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 466
           SA + E  L    YPW H G+LSS DH SIRRG QVY+QVCASCHSM  ++YR LVGV Y
Sbjct: 83  SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCY 140

Query: 467 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           TE+E K +AAE+EV DGPN++GEMF RPGKL D FP+PYPN +
Sbjct: 141 TEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSE 183



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>CY1_YEAST (P07143) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 309

 Score =  124 bits (312), Expect = 2e-28
 Identities = 57/106 (53%), Positives = 74/106 (69%)
 Frame = +2

Query: 278 TIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVG 457
           T  +   AEHGL A  Y W H G   ++DHASIRRG+QVY++VCA+CHS+  +++R LVG
Sbjct: 58  TAEAMTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVG 117

Query: 458 VAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           V++T EE + MA E E  D P+++G    RPGKLSD  P PYPNEQ
Sbjct: 118 VSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQ 163



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>CY1_KLULA (Q00988) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 292

 Score =  123 bits (308), Expect = 5e-28
 Identities = 55/99 (55%), Positives = 73/99 (73%)
 Frame = +2

Query: 299 AEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEE 478
           AEHGL A  Y W H G L ++DH+SIRRG+QVY++VCA+CHS+  +++R +VGV++T  E
Sbjct: 50  AEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSHTNAE 109

Query: 479 TKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
            +AMA E E  D P+D+G    RPGKL+D  P PYPNEQ
Sbjct: 110 VRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQ 148



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>CY1_NEUCR (P07142) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 332

 Score =  119 bits (298), Expect = 7e-27
 Identities = 55/108 (50%), Positives = 73/108 (67%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 451
           +G  ++   AE GL A +YPW H   L ++DH ++RRG QVY++VCASCHS+S + YR L
Sbjct: 65  YGFASAMTPAEEGLHATKYPWVHEQWLKTFDHQALRRGFQVYREVCASCHSLSRVPYRAL 124

Query: 452 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           VG   T +E KA+A E E    PND+GE+  RPGKLSD  P PY N++
Sbjct: 125 VGTILTVDEAKALAEENEYDTEPNDQGEIEKRPGKLSDYLPDPYKNDE 172



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>CYBC_BRAJA (P51131) Cytochrome b/c1 [Contains: Cytochrome b; Cytochrome c1]|
          Length = 687

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 41/91 (45%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
 Frame = +2

Query: 332 WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMAAEI 502
           W  AG    +D  +++RG +VY++VCASCH +S I++R+L    G +Y+  +  A A++ 
Sbjct: 446 WSFAGPFGKFDRGALQRGLKVYKEVCASCHGLSYIAFRNLAEAGGPSYSVAQVAAFASDY 505

Query: 503 EVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           ++ DGPND G+MF RPG+ +D FP P+PNEQ
Sbjct: 506 KIKDGPNDAGDMFERPGRPADYFPSPFPNEQ 536



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>CY1_RHORU (P23135) Cytochrome c1 precursor|
          Length = 272

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 40/103 (38%), Positives = 64/103 (62%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 466
           +A   E G++  +  W   GI   YD   ++RG QV+ +VC++CH M  ++YR+L  + +
Sbjct: 21  AAQANEGGVSLHKQDWSWKGIFGRYDQPQLQRGFQVFHEVCSTCHGMKRVAYRNLSALGF 80

Query: 467 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQ 595
           +E+  K +AAE E   GP+D G+MFTRPG  +D  P P+ N++
Sbjct: 81  SEDGIKELAAEKEFPAGPDDNGDMFTRPGTPADHIPSPFANDK 123



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>CY1_EUGGR (P20114) Cytochrome c1, heme protein|
          Length = 243

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 44/90 (48%), Positives = 54/90 (60%)
 Frame = +2

Query: 329 PWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEV 508
           PWPH       D  S+RRG +VY+QV A CHS+S I YR       ++EE K MAA  EV
Sbjct: 10  PWPHFQWFQGLDWRSVRRGKEVYEQVFAPCHSLSFIKYRHFEAF-MSKEEVKNMAASFEV 68

Query: 509 VDGPNDEGEMFTRPGKLSDRFPQPYPNEQQ 598
            D P+++GE   RPGK  D   QPY NEQ+
Sbjct: 69  DDDPDEKGEARKRPGKRFDTVVQPYKNEQE 98



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>CY1_RHOVI (P81379) Cytochrome c1 precursor|
          Length = 282

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
 Frame = +2

Query: 308 GLAAAEYP-------------WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           GLAAA  P             W  AG    YD A +RRG QV+Q VC SCH++    +R+
Sbjct: 16  GLAAASVPAQASGGDTPHLQSWSFAGPFGQYDKAQLRRGFQVFQNVCVSCHTLENGGFRN 75

Query: 449 LVGVA---YTEEETKAMAAEIEV-VDGPNDEGEMFTRPGKLSDRFPQPYPNE 592
           L   A   +  +E + +AA   V V   ND+G+   R  KL DR P  Y NE
Sbjct: 76  LPSRAAPNWPLDEVRQLAASWPVQVKDINDKGDPMQRAPKLPDRIPSQYANE 127



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>CY1_RHOSH (Q02760) Cytochrome c1 precursor|
          Length = 285

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +2

Query: 323 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMA 493
           + P+   G   ++D   ++RG QVY +VCA+CH M  +  R L    G    E++ +A A
Sbjct: 30  DVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYA 89

Query: 494 AEIEVVDGPNDEGEMFTRPGKLSDRFP 574
            +  V D    E     R GK +D FP
Sbjct: 90  TQFTVTDEETGE----DREGKPTDHFP 112



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>CY1_PARDE (P13627) Cytochrome c1 precursor|
          Length = 450

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = +2

Query: 284 ASADEAEHGLAAA---EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV 454
           A+A EA    AAA   +  +   G    +D   ++RG QVY +VC++CH +  +  R L 
Sbjct: 201 AAAQEAGDSHAAAHIEDISFSFEGPFGKFDQHQLQRGLQVYTEVCSACHGLRYVPLRTLA 260

Query: 455 ---GVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFP 574
              G    E++ +A AA  ++ D   +E     RP   +D FP
Sbjct: 261 DEGGPQLPEDQVRAYAANFDITDPETEE----DRPRVPTDHFP 299



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>CY1_RHOCA (P08501) Cytochrome c1 precursor|
          Length = 279

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +2

Query: 323 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMA 493
           ++ +   GI   YD A +RRG QVY +VC++CH M  +  R L    G        +  A
Sbjct: 27  DHAFSFEGIFGKYDQAQLRRGFQVYNEVCSACHGMKFVPIRTLADDGGPQLDPTFVREYA 86

Query: 494 AEIEVVDGPNDEGEMFTRPGKLSDRFP 574
           A ++ +    D GE   R  K +D FP
Sbjct: 87  AGLDTII-DKDSGE--ERDRKETDMFP 110



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>QCRC_MYCTU (P63887) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 280

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 460
           GLAA   P P   +      A +R G Q++   C SCH  +L    D    L+GV
Sbjct: 40  GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94



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>QCRC_MYCBO (P63888) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 280

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 460
           GLAA   P P   +      A +R G Q++   C SCH  +L    D    L+GV
Sbjct: 40  GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94



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>QCRC_MYCLE (O69583) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 289

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 460
           GLAA   P P   +      A +R G Q++   C SCH  +L    D    L+GV
Sbjct: 49  GLAAVLTPTPQVAVADEDSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 103



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>CY1_CHRVI (O31216) Cytochrome c1 precursor|
          Length = 244

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDL 451
           D AS++RG + +   C  CHS+  + Y  L
Sbjct: 35  DQASLQRGAKYFMNYCTGCHSLQYMRYNRL 64



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>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
           (Transcription factor GATA-B) (dGATA-B) (Protein
           serpent)
          Length = 1264

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -2

Query: 386 VHGGLMRDRKS*GCQHAARGTLQLPNHARLHLQMLSYQNIKDQKHQLREEPMLSVQQRTL 207
           V+ G +  + + G Q+     +Q PN  + HLQ   +Q  + Q+HQ  ++  L  QQ+  
Sbjct: 502 VYAGSLLTQTANGIQYG----MQSPNQTQAHLQQQHHQQ-QQQQHQQHQQQQLQQQQQQH 556

Query: 206 H 204
           H
Sbjct: 557 H 557



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>MOAE_RHILO (Q984P0) Molybdopterin-converting factor subunit 2 (MPT synthase|
           subunit 2) (Molybdopterin synthase subunit 2)
           (Molybdenum cofactor biosynthesis protein E)
           (Molybdopterin-converting factor large subunit)
          Length = 159

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 296 EAEHGLAAAEYP--WPHAGILSSYDHASIRRGHQVYQQVCASCH 421
           EAE G  AAE    WP  G+   + H  IR G  +   V AS H
Sbjct: 62  EAEIGRIAAEAVERWPLQGLTVIHRHGKIRPGENIVLVVAASAH 105



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>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
           arginine/serine-rich 2-interacting protein)
           (SC35-interacting protein 1) (CTD-associated SR protein
           11) (Splicing regulatory protein 129) (SRrp129)
           (NY-REN-40 antigen)
          Length = 1148

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 267 KRPEAPTPRRANALSPAEDSSCFPRNEESR 178
           KRP++P+PRR       +  S  P+NE +R
Sbjct: 497 KRPQSPSPRRETGKESRKSQSPSPKNESAR 526



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>LAP2_MOUSE (Q80TH2) LAP2 protein (Erbb2-interacting protein) (Erbin)|
           (Densin-180-like protein)
          Length = 1402

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +2

Query: 434 ISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNE 592
           IS  +    A  EE+ K  A      D   DE E   R G L  R+P PYP+E
Sbjct: 439 ISDNESFNPALWEEQRKQRAQVAFECDEDKDEREAPPREGNLK-RYPTPYPDE 490



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>MIAA_STAAW (P65356) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254



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>MIAA_STAAS (Q6G9R0) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254



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>MIAA_STAAR (Q6GHD2) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254



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>MIAA_STAAN (P65355) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254



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>MIAA_STAAM (P65354) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254



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>MIAA_STAAC (Q5HGC9) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 460
           DH   R   Q+ +Q   SC SM  I Y++L+ V
Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,083,550
Number of Sequences: 219361
Number of extensions: 1278097
Number of successful extensions: 4253
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4249
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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