ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 505 bits (255), Expect = e-140 Identities = 436/495 (88%), Gaps = 1/495 (0%) Strand = Plus / Plus Query: 109 aatggctgccggcagggccattaaccagcttctgaagaaaacttttcagagccagtcttc 168 ||||||||||| |||| |||||||||||| ||||||| |||| | | | ||||||| | Sbjct: 121 aatggctgccgcaaggggcattaaccagctcctgaagagaactctctacaaccagtctgc 180 Query: 169 tggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgag 228 ||| || || | ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 181 tggttcgtcgccgcttttctcatttcggggaaagcatgaagaatcctctgctggactgag 240 Query: 229 agcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatc 288 ||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||||| Sbjct: 241 agcattggctcttcttggagttggtgcctctggtcttttgagtttttctacaatagcatc 300 Query: 289 tgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcat 348 ||| |||||||| |||||||| |||||||| |||| || |||||||| ||||||||||| Sbjct: 301 tgctgatgaagctgagcatggcttggcagccccagattatccctggccacatgctggcat 360 Query: 349 ccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttaccagcaagtgtg 408 | | ||||| || |||||||||||||| || ||||| |||||||||||| |||||| || Sbjct: 361 catgagctcgtatgatcacgcatcaattcggcgtgggcatcaagtttacacgcaagtttg 420 Query: 409 tgcatcttgtcactccatgtcattgatttcataccgtgatttggttggggtggcctatac 468 ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 421 tgcctcttgtcactccatgtccttgatttcataccgtgatttggttggcgtggcctatac 480 Query: 469 tgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtcctaatgatga 528 |||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 481 tgaagaggaaacaaaggcaatggctgctgagattgaggtagttgatggtcctaatgatga 540 Query: 529 gggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagccttatccaaa 588 ||||||||||||||| || ||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 541 gggtgaaatgttcacccgccctggtaaactgagcgatcgcttcccacagccttatgcaaa 600 Query: 589 tgagc-agcagcccg 602 |||| ||||||||| Sbjct: 601 cgagcaagcagcccg 615 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 cccgcgccgccgctcgtcggagccccgc 73 |||||||||||||||| |||||| |||| Sbjct: 64 cccgcgccgccgctcgccggagctccgc 91
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 490 bits (247), Expect = e-135 Identities = 434/495 (87%), Gaps = 1/495 (0%) Strand = Plus / Plus Query: 110 atggctgccggcagggccattaaccagcttctgaagaaaacttttcagagccagtcttct 169 |||||||||| |||| |||||||||||||||||||| || | | || | |||||| || Sbjct: 166 atggctgccgcaaggggcattaaccagcttctgaagagaattctccacaaccagtccgct 225 Query: 170 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 229 || ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 226 ggtccatggctgctttcttcatttcggggaaatcatgaagagtcctctgctggattgaga 285 Query: 230 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 289 |||||||| ||||| ||||||||||| || |||||||| |||||| ||| ||||||||| Sbjct: 286 gcattggcgcttcttggagttggtgcctccggtcttttgagttttgctacaatagcatct 345 Query: 290 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 349 || |||||||| ||||||||||||||||| |||| || || ||||| |||||||||||| Sbjct: 346 gctgatgaagctgagcatggtttggcagccccagattatccgtggccacatgctggcatc 405 Query: 350 cttagctcttacgatcacgcatcaatccgccgtggacatcaagtttaccagcaagtgtgt 409 | |||||||| ||||| |||||||| ||||| || |||||||||||| ||||| ||| Sbjct: 406 atgagctcttatgatcatgcatcaattcgccgagggcatcaagtttacacacaagtttgt 465 Query: 410 gcatcttgtcactccatgtcattgatttcataccgtgatttggttggggtggcctatact 469 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 466 gcttcttgtcactccatgtccttgatttcataccgtgatttggttggggtggcctatact 525 Query: 470 gaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgag 529 || |||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 526 gaggaggaaacaaaggcaatggctgctgagattgaggtcgttgatggtcctaatgatgag 585 Query: 530 ggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagccttatccaaat 589 |||||||||||||| || ||||| || || || |||||||| || ||||||||| ||||| Sbjct: 586 ggtgaaatgttcacccgccctggtaaactcagcgatcgctttccacagccttatgcaaat 645 Query: 590 gagc-agcagcccga 603 |||| |||||||||| Sbjct: 646 gagcaagcagcccga 660
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 426 bits (215), Expect = e-116 Identities = 387/443 (87%), Gaps = 1/443 (0%) Strand = Plus / Plus Query: 161 cagtcttctggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgct 220 ||||| || |||||||||||||| || || || ||| |||||||||||| ||||| ||| Sbjct: 256 cagtcctcaggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgct 315 Query: 221 ggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggtacg 280 ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||| Sbjct: 316 ggactgagagcattggctcttcttggagttggtgcttctggtcttttaagctttgctaca 375 Query: 281 atagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcat 340 ||||| |||||||||||||| ||||||||||||||||| || || || |||||||| ||| Sbjct: 376 atagcttctgcagatgaagctgagcatggtttggcagcagctgaatatccctggccacat 435 Query: 341 gctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttaccag 400 |||||||| ||||||||||| || || ||||| || || ||||||||||||||||| Sbjct: 436 gctggcattcttagctcttatgaccatgcatctattcggcgtggacatcaagtttataca 495 Query: 401 caagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttggggtg 460 ||||||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| ||| Sbjct: 496 caagtgtgtgcctcttgccattccatgtcattaatttcgtaccgagatttggttggtgtg 555 Query: 461 gcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtcct 520 ||||| |||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 556 gcctacactgaagaagaaacaaaggctatggctgctgagattgaggtggttgatggtcct 615 Query: 521 aatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagcct 580 ||||||||||||||||||||||| |||||||| ||| | ||||| || ||||| || || Sbjct: 616 aatgatgagggtgaaatgttcacacgtcctggtaagttaagtgaccggttcccacaacca 675 Query: 581 tatccaaatgagc-agcagcccg 602 ||||||||||||| ||||||||| Sbjct: 676 tatccaaatgagcaagcagcccg 698
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 341 bits (172), Expect = 2e-90 Identities = 325/376 (86%) Strand = Plus / Plus Query: 219 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 278 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 110 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 169 Query: 279 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 338 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 170 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 229 Query: 339 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 398 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 230 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 289 Query: 399 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 458 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 290 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 349 Query: 459 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 518 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 350 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 409 Query: 519 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 578 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 410 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 469 Query: 579 cttatccaaatgagca 594 | || |||||||||| Sbjct: 470 cctacgcaaatgagca 485
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 341 bits (172), Expect = 2e-90 Identities = 325/376 (86%) Strand = Plus / Plus Query: 219 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 278 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 334 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 393 Query: 279 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 338 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 394 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 453 Query: 339 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 398 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 454 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 513 Query: 399 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 458 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 514 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 573 Query: 459 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 518 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 574 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 633 Query: 519 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 578 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 634 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 693 Query: 579 cttatccaaatgagca 594 | || |||||||||| Sbjct: 694 cctacgcaaatgagca 709
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 341 bits (172), Expect = 2e-90 Identities = 325/376 (86%) Strand = Plus / Plus Query: 219 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 278 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 258 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 317 Query: 279 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 338 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 318 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 377 Query: 339 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 398 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 378 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 437 Query: 399 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 458 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 438 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 497 Query: 459 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 518 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 498 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 557 Query: 519 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 578 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 558 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 617 Query: 579 cttatccaaatgagca 594 | || |||||||||| Sbjct: 618 cctacgcaaatgagca 633
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 222 bits (112), Expect = 1e-54 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 94714 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 94655 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 94654 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 94595 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 94594 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 94535 Query: 560 agtgatcgcttcccgcagccttatccaaatgagc-agcagcccg 602 ||||| || ||||| || || ||||||||||||| ||||||||| Sbjct: 94534 agtgaccggttcccacaaccatatccaaatgagcaagcagcccg 94491 Score = 212 bits (107), Expect = 1e-51 Identities = 170/191 (89%) Strand = Plus / Minus Query: 170 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 229 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 95193 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 95134 Query: 230 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 289 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 95133 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 95074 Query: 290 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 349 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 95073 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 95014 Query: 350 cttagctctta 360 ||||||||||| Sbjct: 95013 cttagctctta 95003
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 222 bits (112), Expect = 1e-54 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 13411251 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 13411192 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 13411191 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 13411132 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 13411131 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 13411072 Query: 560 agtgatcgcttcccgcagccttatccaaatgagc-agcagcccg 602 ||||| || ||||| || || ||||||||||||| ||||||||| Sbjct: 13411071 agtgaccggttcccacaaccatatccaaatgagcaagcagcccg 13411028 Score = 212 bits (107), Expect = 1e-51 Identities = 170/191 (89%) Strand = Plus / Minus Query: 170 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 229 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 13411730 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 13411671 Query: 230 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 289 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 13411670 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 13411611 Query: 290 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 349 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 13411610 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 13411551 Query: 350 cttagctctta 360 ||||||||||| Sbjct: 13411550 cttagctctta 13411540
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 212 bits (107), Expect = 1e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 41069204 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 41069263 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 41069264 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 41069323 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 41069324 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 41069383 Query: 560 agtgatcgcttcccgcagccttatccaaatgagca 594 || || || ||||| || || || |||||||||| Sbjct: 41069384 agcgaccgtttcccacaaccctacgcaaatgagca 41069418 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 219 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 278 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 41068724 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 41068783 Query: 279 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 338 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 41068784 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 41068843 Query: 339 atgctggcatccttagctcttacgatcacgcatc 372 ||||||||||||||||||| || ||||| ||||| Sbjct: 41068844 atgctggcatccttagctcatatgatcatgcatc 41068877
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 212 bits (107), Expect = 1e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 106134 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 106193 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 106194 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 106253 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 106254 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 106313 Query: 560 agtgatcgcttcccgcagccttatccaaatgagca 594 || || || ||||| || || || |||||||||| Sbjct: 106314 agcgaccgtttcccacaaccctacgcaaatgagca 106348 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 219 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 278 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 105654 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 105713 Query: 279 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 338 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 105714 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 105773 Query: 339 atgctggcatccttagctcttacgatcacgcatc 372 ||||||||||||||||||| || ||||| ||||| Sbjct: 105774 atgctggcatccttagctcatatgatcatgcatc 105807
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 386 catcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgt 445 ||||| |||||||||||||||||||| || || ||||| ||||| | ||||| |||||| Sbjct: 494 catcaggtttaccagcaagtgtgtgcgtcctgccactcaatgtcgctaatttcctaccgt 553 Query: 446 gatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaa 505 ||| | ||||| || || || |||||||| ||||||||||| ||||| || |||||||| Sbjct: 554 gatcttgttggtgttgcatacactgaagaagaaactaaggccatggcagcagaaattgag 613 Query: 506 gtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgat 565 ||||||||||| ||||||||||||||||| |||||||| || ||||| ||| |||||||| Sbjct: 614 gtggttgatggccctaatgatgagggtgagatgttcacccgccctgggaagttgagtgat 673 Query: 566 cgcttcccgcagccttatccaaatga 591 || || || |||||||| |||||||| Sbjct: 674 cgttttccacagccttacccaaatga 699
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 159 bits (80), Expect = 1e-35 Identities = 215/260 (82%) Strand = Plus / Plus Query: 332 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 391 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 93 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 152 Query: 392 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 451 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 153 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 212 Query: 452 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 511 || |||||||| ||||| || |||||| ||||| ||||| ||||| ||||| |||| Sbjct: 213 gtcggggtggcatatacagaggaggaagtaaaggctatggcagctgagattgaggtggag 272 Query: 512 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 571 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 273 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 332 Query: 572 ccgcagccttatccaaatga 591 || ||||| ||||||||||| Sbjct: 333 cctcagccatatccaaatga 352
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Plus Query: 332 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 391 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 390 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 449 Query: 392 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 451 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 450 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 509 Query: 452 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 511 || |||||||| ||||| || || ||| ||||| ||||| ||||| ||||| |||| Sbjct: 510 gtcggggtggcatatacagaggaagaagtaaaggctatggcagctgagattgaggtggcg 569 Query: 512 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 571 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 570 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 629 Query: 572 ccgcagccttatccaaatga 591 || ||||| ||||||||||| Sbjct: 630 cctcagccatatccaaatga 649
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 135 bits (68), Expect = 2e-28 Identities = 176/212 (83%) Strand = Plus / Plus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||| ||||||||||| |||||| ||||| || || || |||||||| ||||| ||| Sbjct: 77041 cgtggtcatcaagtttatacgcaagtctgtgcttcctgccattccatgtctttgatatca 77100 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||||||||||||||| || || || || |||| ||| |||||||||||| |||| Sbjct: 77101 taccgtgatttggttggtgttgcttacacagaagcggaggtaaaggcaatggctactgag 77160 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 ||||| ||||||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77161 attgaggtggttgatggccctaatgatgagggtgagatgtttacacgacccggcaaactc 77220 Query: 560 agtgatcgcttcccgcagccttatccaaatga 591 ||||||||||| || ||||| ||| ||||||| Sbjct: 77221 agtgatcgctttcctcagccatattcaaatga 77252 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 105587 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 105646 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 105647 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 105706 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 105707 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 105766 Query: 560 agtgatcgcttcccgcagccttatccaaatga 591 ||||||||||| || ||||| ||| ||||||| Sbjct: 105767 agtgatcgctttcctcagccatatgcaaatga 105798
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 392 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 451 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 4150 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 4209 Query: 452 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 511 |||||||| || ||||| || || || || ||||| ||||| || |||||||| |||||| Sbjct: 4210 gttggggttgcgtataccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 4269 Query: 512 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 571 ||||| ||||||||||| ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 4270 gatgggcctaatgatgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 4329 Query: 572 ccgcagccttatccaaatga 591 || ||||||||| ||||||| Sbjct: 4330 cctcagccttatgcaaatga 4349
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 596 gtgaccggtttcctcagccatatgcaaatga 626
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 322 cagagtacccgtggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 381 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 382 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 441 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 442 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 501 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 502 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 561 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 562 gtgaccggtttcctcagccatatgcaaatga 592
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 423 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 543 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 544 gtgaccggtttcctcagccatatgcaaatga 574
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 334 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 393 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 394 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 453 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 454 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 513 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 514 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 573 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 574 gtgaccggtttcctcagccatatgcaaatga 604
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 127 bits (64), Expect = 5e-26 Identities = 166/200 (83%) Strand = Plus / Plus Query: 392 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 451 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 443 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 502 Query: 452 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 511 |||||||| ||||| || || || || || ||||| ||||| || |||||||| |||||| Sbjct: 503 gttggggttgcctacaccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 562 Query: 512 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 571 ||||| |||||||| || ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 563 gatgggcctaatgacgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 622 Query: 572 ccgcagccttatccaaatga 591 || ||||||||| ||||||| Sbjct: 623 cctcagccttatgcaaatga 642
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 125 bits (63), Expect = 2e-25 Identities = 219/271 (80%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 221 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 280 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 281 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 340 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 341 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 400 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 401 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 460 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 461 gtgaccggtttcctcagccatatgcaaatga 491
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 125 bits (63), Expect = 2e-25 Identities = 219/271 (80%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 560 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 561 gtgatcgcttcccgcagccttatccaaatga 591 |||| || || || ||||| ||| ||||||| Sbjct: 596 gtgaccggtttcctcagccatatgcaaatga 626
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 380 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 439 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 9195 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 9254 Query: 440 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 499 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 9255 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 9314 Query: 500 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 9315 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 9374 Query: 560 agtgatcgcttcccgcagccttatccaaatga 591 ||||||||||| || ||||| ||| ||||||| Sbjct: 9375 agtgatcgctttcctcagccatatgcaaatga 9406
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 119 bits (60), Expect = 1e-23 Identities = 220/272 (80%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 279 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 338 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 339 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 398 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 399 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 458 Query: 501 ttgaagt-ggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 559 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 459 tcgaggtaagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactc 518 Query: 560 agtgatcgcttcccgcagccttatccaaatga 591 ||||| || || || ||||| ||| ||||||| Sbjct: 519 agtgaccggtttcctcagccatatgcaaatga 550
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 117 bits (59), Expect = 4e-23 Identities = 182/223 (81%) Strand = Plus / Plus Query: 321 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 380 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 381 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 440 |||| ||||||||||| |||||||| ||| |||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgttcatcatgccattcaatgtctctgatctcat 423 Query: 441 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 500 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 501 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcac 543 | || || || ||||| ||||||||||||||||| |||||||| Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcac 526
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Minus Query: 374 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 433 ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || Sbjct: 21228 atccgtcgtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctg 21169 Query: 434 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 493 || |||||||| || ||||| || || ||||| || || || || | ||||||||||| Sbjct: 21168 atctcataccgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggca 21109 Query: 494 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 553 |||||||| || || || ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 21108 gctgaaatcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggt 21049 Query: 554 aagctgagtgatcgcttcccgcagccttatccaaatga 591 || || ||||| || || || ||||| ||| ||||||| Sbjct: 21048 aaactcagtgaccggtttcctcagccatatgcaaatga 21011
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 101 bits (51), Expect = 3e-18 Identities = 137/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 431 ttgatttcataccgtgatttggttggg-gtggcctatactgaagaggaaactaaggcaat 489 ||||| |||||||||||||||||||| || || ||||| ||||| ||| ||||| || Sbjct: 23 ttgatatcataccgtgatttggttggctgttgcttatacagaagatgaagtaaaggccat 82 Query: 490 gg-ctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtc 548 || | ||||| ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 83 ggacagctgagattgaggtggttgacggtcctaatgatgagggtgaaatgttcactcgcc 142 Query: 549 ctggcaagctgagtgatcgcttcccgcagccttatccaaatga 591 | || || || ||||||||||| || ||||| ||| ||||||| Sbjct: 143 ccggtaaactcagtgatcgctttcctcagccatatgcaaatga 185
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 374 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 433 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 434 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 493 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 494 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 553 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 554 aagctgagtgatcg 567 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 374 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 433 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 434 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 493 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 494 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 553 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 554 aagctgagtgatcg 567 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 374 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 433 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 15356 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 15415 Query: 434 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 493 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 15416 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 15475 Query: 494 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 553 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 15476 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 15535 Query: 554 aagctgagtgatcg 567 || || |||||||| Sbjct: 15536 aaactcagtgatcg 15549
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 75.8 bits (38), Expect = 1e-10 Identities = 57/62 (91%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 482 aaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttc 541 ||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 16 aaggccatggctgctgaaattgaggtggt-gatggtcctaatgatgaaggtgagatgttc 74 Query: 542 ac 543 || Sbjct: 75 ac 76
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 21 cctccctcccacccgctccccacctccc 48 ||||||||||||||||| |||||||||| Sbjct: 163143 cctccctcccacccgcttcccacctccc 163170
>gb|DQ228959.1| Toxoplasma gondii mitochondrial cytochrome c1 protein (Cytc1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1191 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 515 ggtcctaatgatgagggtgaaatgttcacgcgtcctgg 552 ||||| |||||| |||| ||||||| |||||||||||| Sbjct: 676 ggtccaaatgatcagggcgaaatgtacacgcgtcctgg 713
>ref|XM_472861.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 cccgcgccgccgctcgtcggag 67 |||||||||||||||||||||| Sbjct: 47 cccgcgccgccgctcgtcggag 68
>gb|AC125042.4| Mus musculus BAC clone RP23-339G10 from chromosome 9, complete sequence Length = 219183 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cctccctcccacccgctcccca 42 |||||||||||||||||||||| Sbjct: 165620 cctccctcccacccgctcccca 165641
>gb|AC125318.4| Mus musculus BAC clone RP24-301F13 from chromosome 8, complete sequence Length = 152405 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 aacttttcagagccagtcttct 169 |||||||||||||||||||||| Sbjct: 73898 aacttttcagagccagtcttct 73919
>gb|AC130837.4| Mus musculus BAC clone RP24-157P23 from chromosome 8, complete sequence Length = 155270 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 aacttttcagagccagtcttct 169 |||||||||||||||||||||| Sbjct: 15606 aacttttcagagccagtcttct 15627
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cccgcgccgccgctcgtcggag 67 |||||||||||||||||||||| Sbjct: 89081 cccgcgccgccgctcgtcggag 89060
>gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome 9, complete sequence Length = 177728 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cctccctcccacccgctcccca 42 |||||||||||||||||||||| Sbjct: 47507 cctccctcccacccgctcccca 47528
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cccgcgccgccgctcgtcggag 67 |||||||||||||||||||||| Sbjct: 23768169 cccgcgccgccgctcgtcggag 23768148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctccatccacctccctccc 30 |||||||||||||||||||| Sbjct: 33086094 cctccatccacctccctccc 33086075 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccccacctcccgcgccgccgctcgtcggagcc 69 |||| ||||||||||||||| ||| ||||||| Sbjct: 23507512 cccctcctcccgcgccgccgatcgccggagcc 23507543
>gb|AC019201.6| Homo sapiens BAC clone RP11-383I5 from 2, complete sequence Length = 168011 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 472 agaggaaactaaggcaatggctgctg 497 ||||||||| |||||||||||||||| Sbjct: 158675 agaggaaaccaaggcaatggctgctg 158700
>gb|AC151975.1| Mus musculus BAC clone RP24-423F11 from 8, complete sequence Length = 198686 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 aacttttcagagccagtcttct 169 |||||||||||||||||||||| Sbjct: 164544 aacttttcagagccagtcttct 164565
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 tgcttctggtcttttatgtttt 274 |||||||||||||||||||||| Sbjct: 137042 tgcttctggtcttttatgtttt 137063
>ref|NM_197016.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055P24.5), mRNA Length = 1383 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ccacctcccgcgccgccgctc 60 ||||||||||||||||||||| Sbjct: 291 ccacctcccgcgccgccgctc 311
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 gatggtcctaatgatgagggtgaaatgtt 540 |||||||| |||||||| ||||||||||| Sbjct: 331697 gatggtccaaatgatgacggtgaaatgtt 331725
>ref|XM_422081.1| PREDICTED: Gallus gallus similar to hypothetical protein MGC10993 (LOC424232), mRNA Length = 2751 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgccgctcgtcggagccccgcctcg 77 |||||| |||||||||||||||||| Sbjct: 1132 cgccgcccgtcggagccccgcctcg 1156
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgccgccgctcgtcggag 67 ||||||||||||||||||||| Sbjct: 14995163 ccgcgccgccgctcgtcggag 14995183
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgccgccgctcgtcggag 67 ||||||||||||||||||||| Sbjct: 47599 ccgcgccgccgctcgtcggag 47579
>emb|AL445286.12| Human DNA sequence from clone RP5-1005L2 on chromosome 20 Contains STSs, GSSs and CpG islands, complete sequence Length = 11118 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ctccctcccacccgctccccacctc 46 ||||||||||||| ||||||||||| Sbjct: 9059 ctccctcccaccccctccccacctc 9083
>gb|AC133796.2| Homo sapiens 3 BAC RP11-10I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 tactgaagaggaaactaaggc 486 ||||||||||||||||||||| Sbjct: 23879 tactgaagaggaaactaaggc 23899
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 40 ccacctcccgcgccgccgctcgtcggagccccgcctc 76 |||||| |||||||||||| |||||| || ||||||| Sbjct: 226574 ccacctgccgcgccgccgcccgtcggcgcgccgcctc 226538
>emb|AJ235271.1|RPXX02 Rickettsia prowazekii strain Madrid E, complete genome; segment 2/4 Length = 312430 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 gatggtcctaatgatgagggtgaaatgtt 540 |||||||| |||||||| ||||||||||| Sbjct: 50796 gatggtccaaatgatgatggtgaaatgtt 50824
>gb|AC165069.2| Phakopsora pachyrhizi clone JGIAFNA-645A6, complete sequence Length = 40445 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 atgatgagggtgaaatgttca 542 ||||||||||||||||||||| Sbjct: 1063 atgatgagggtgaaatgttca 1083
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ggagccccgcctcgccgtgcc 84 ||||||||||||||||||||| Sbjct: 4324329 ggagccccgcctcgccgtgcc 4324349
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ccacctcccgcgccgccgctc 60 ||||||||||||||||||||| Sbjct: 17425277 ccacctcccgcgccgccgctc 17425257
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgccgccgctcgtcggag 67 ||||||||||||||||||||| Sbjct: 14989697 ccgcgccgccgctcgtcggag 14989717
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ccacctcccgcgccgccgctc 60 ||||||||||||||||||||| Sbjct: 54272 ccacctcccgcgccgccgctc 54252
>gb|AF117812.1|AF117812 Oryctolagus cuniculus glucose transporter 3 (GLUT3) mRNA, partial cds Length = 1396 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 tgcgcctccatccacctccctccca 31 ||||||||| ||||||||||||||| Sbjct: 1206 tgcgcctccttccacctccctccca 1230
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ccacctcccgcgccgccgctc 60 ||||||||||||||||||||| Sbjct: 17434317 ccacctcccgcgccgccgctc 17434297
>ref|XM_629511.1| Dictyostelium discoideum hypothetical protein (DDB0184465), partial mRNA Length = 828 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 362 gatcacgcatcaatccgccgtggacatcaagtttac 397 ||||||||| |||| || ||||| |||||||||||| Sbjct: 172 gatcacgcagcaattcgtcgtggtcatcaagtttac 207
>ref|XM_472828.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1758 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccccacctcccgcgccgccgctcgtcggagcc 69 |||| ||||||||||||||| ||| ||||||| Sbjct: 1577 cccctcctcccgcgccgccgatcgccggagcc 1608
>gb|AF461092.1| Mus musculus chondroitin sulfate proteoglycan 5-III (Cspg5) mRNA, complete cds Length = 3864 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 1650 ctccccgcctcccgcgccgccgct 1627
>gb|AF461090.1| Mus musculus chondroitin sulfate proteoglycan 5-I (Cspg5) mRNA, complete cds Length = 3783 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 1650 ctccccgcctcccgcgccgccgct 1627
>gb|AF461089.1| Homo sapiens chondroitin sulfate proteoglycan 5-III (CSPG5) mRNA, complete cds Length = 4161 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 1929 ctccccgcctcccgcgccgccgct 1906
>gb|AF461087.1| Homo sapiens chondroitin sulfate proteoglycan 5-I (CSPG5) mRNA, complete cds Length = 4080 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 1929 ctccccgcctcccgcgccgccgct 1906
>ref|XM_741478.1| Aspergillus fumigatus Af293 DNA repair protein Rhp26 (Afu4g03840) partial mRNA Length = 3645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gctgaaattgaagtggttga 513 |||||||||||||||||||| Sbjct: 37 gctgaaattgaagtggttga 56
>gb|AF285607.2| Bos taurus fatty acid synthase (FASN) gene, complete cds Length = 19760 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctccatccacctccctccc 30 |||||||||||||||||||| Sbjct: 1402 cctccatccacctccctccc 1383
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gtcctggcaagctgagtgat 565 |||||||||||||||||||| Sbjct: 8614 gtcctggcaagctgagtgat 8633
>emb|AL773524.13| Human DNA sequence from clone RP11-250H24 on chromosome 9 Contains a calponin 2 (CNN2) pseudogene and a novel pseudogene, complete sequence Length = 125622 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 taatgatgagggtgaaatgt 539 |||||||||||||||||||| Sbjct: 104070 taatgatgagggtgaaatgt 104089
>gb|AC131952.1| Homo sapiens BAC clone RP11-617H11 from 4, complete sequence Length = 108700 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 5713 catccacctccctcccaccc 5694
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cccacctcccgcgccgccgc 58 |||||||||||||||||||| Sbjct: 232925 cccacctcccgcgccgccgc 232944
>gb|BC054574.1| Danio rerio aminolevulinate, delta-, synthetase 1, mRNA (cDNA clone MGC:63935 IMAGE:6791081), complete cds Length = 2186 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcttctggctcatctctgct 183 |||||||||||||||||||| Sbjct: 432 tcttctggctcatctctgct 413
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ctcatctctgctttcttcat 191 |||||||||||||||||||| Sbjct: 59026 ctcatctctgctttcttcat 59007
>gb|AC093742.3| Homo sapiens BAC clone RP11-24M8 from 4, complete sequence Length = 114455 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 actccatgtcattgatttca 439 |||||||||||||||||||| Sbjct: 112262 actccatgtcattgatttca 112281
>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence Length = 186076 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 tccatgtcattgatttcata 441 |||||||||||||||||||| Sbjct: 113972 tccatgtcattgatttcata 113991
>gb|AC016902.4|AC016902 Homo sapiens BAC clone RP11-217B19 from 11, complete sequence Length = 184841 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cacctccctcccacccgctc 38 |||||||||||||||||||| Sbjct: 37031 cacctccctcccacccgctc 37012
>gb|AC004847.3|AC004847 Homo sapiens clone RP4-647J21, complete sequence Length = 122280 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 97540 catccacctccctcccaccc 97559
>gb|AC138466.12| Homo sapiens 12 BAC RP13-977J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129492 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gtcggagccccgcctcgccg 80 |||||||||||||||||||| Sbjct: 82745 gtcggagccccgcctcgccg 82726
>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence Length = 171391 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 12737 ctccccgcctcccgcgccgccgct 12760
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 115062 ctccccgcctcccgcgccgccgct 115085
>emb|AL731780.6| Mouse DNA sequence from clone RP23-365D10 on chromosome 4, complete sequence Length = 78870 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tctgaagaaaacttttcaga 158 |||||||||||||||||||| Sbjct: 35183 tctgaagaaaacttttcaga 35164
>dbj|BS000123.1| Pan troglodytes chromosome 22 clone:PTB-109N23, map 22, complete sequences Length = 216200 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 124334 catccacctccctcccaccc 124353
>emb|Z80771.1|HS253J14 Human DNA sequence from clone RP1-253J14 on chromosome X, complete sequence Length = 82225 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 57627 catccacctccctcccaccc 57646
>gb|AY107216.1| Zea mays PCO114058 mRNA sequence Length = 1442 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 tggtcctaatgatgagggtg 533 |||||||||||||||||||| Sbjct: 104 tggtcctaatgatgagggtg 123
>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete sequence Length = 43586 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctccatccacctccctccc 30 |||||||||||||||||||| Sbjct: 11595 cctccatccacctccctccc 11576
>dbj|AP003100.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-27G22, complete sequence Length = 200276 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cacctccctcccacccgctc 38 |||||||||||||||||||| Sbjct: 190882 cacctccctcccacccgctc 190863
>dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, section 73/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 127793 catccacctccctcccaccc 127812
>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence Length = 173710 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gtcctggcaagctgagtgat 565 |||||||||||||||||||| Sbjct: 8815 gtcctggcaagctgagtgat 8796
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctccatccacctccctccc 30 |||||||||||||||||||| Sbjct: 95675 cctccatccacctccctccc 95656
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccccacctcccgcgccgccgctcgtcggagcc 69 |||| ||||||||||||||| ||| ||||||| Sbjct: 63415 cccctcctcccgcgccgccgatcgccggagcc 63446
>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592, complete sequence Length = 96561 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gaagaggaaactaaggcaat 489 |||||||||||||||||||| Sbjct: 91895 gaagaggaaactaaggcaat 91876
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gaagaggaaactaaggcaat 489 |||||||||||||||||||| Sbjct: 52406 gaagaggaaactaaggcaat 52387
>dbj|AP006649.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320b, complete sequence Length = 32128 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gaagaggaaactaaggcaat 489 |||||||||||||||||||| Sbjct: 3937 gaagaggaaactaaggcaat 3956
>ref|NM_201287.1| Danio rerio aminolevulinate, delta-, synthetase 1 (alas1), mRNA Length = 2186 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tcttctggctcatctctgct 183 |||||||||||||||||||| Sbjct: 432 tcttctggctcatctctgct 413
>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence Length = 194160 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ctccccacctcccgcgccgccgct 59 |||||| ||||||||||||||||| Sbjct: 10612 ctccccgcctcccgcgccgccgct 10635
>dbj|AP000155.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 7/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 36210 catccacctccctcccaccc 36229
>dbj|AP000013.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 6/13 Length = 100000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 71791 catccacctccctcccaccc 71810
>dbj|AP001414.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:D30, LB7T-ERG region, complete sequence Length = 17740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catccacctccctcccaccc 34 |||||||||||||||||||| Sbjct: 3515 catccacctccctcccaccc 3534 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,608,340 Number of Sequences: 3902068 Number of extensions: 5608340 Number of successful extensions: 122309 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121616 Number of HSP's gapped (non-prelim): 674 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
