ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 345 bits (174), Expect = 1e-91 Identities = 333/386 (86%) Strand = Plus / Plus Query: 154 agctacccggtcatcggctgcctcgtcgccttctacgagaaccggcggcgcctccttgac 213 ||||||||||| ||||| ||||| || || |||||| ||||||||||| || || ||| Sbjct: 35860 agctacccggtgatcgggtgcctggtggcgttctaccgcaaccggcggcggctgctggac 35919 Query: 214 tggtacaccgagatgctgtcggcctcgcccacccagacgatcgtcgttgaccgcctgggc 273 |||||||| ||||||||| |||| ||||| | |||||||||||||||||||| |||||| Sbjct: 35920 tggtacacggagatgctggcggcgtcgccgtcgcagacgatcgtcgttgaccggctgggc 35979 Query: 274 gcgcgccggaccgtggtgaccgcgaacccggccaacgtcgagtacatcctcctgggcaac 333 ||||| || || |||||||| ||||||||||| ||||||||| ||||||||| || | Sbjct: 35980 gcgcggcgcacggtggtgacggcgaacccggcgaacgtcgagcacatcctccgggcgagg 36039 Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 36040 ttcgccaactaccccaaggggaagccgttcaccgacgtgctcggcgacctgctcggcatg 36099 Query: 394 ggcatcttcaacgtcgacggcgacaagtggtacgcccagcggaagctggtcagccacgag 453 ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||| Sbjct: 36100 ggcatcttcaacgtcgacggcgagctctggcacgcccagcgcaagctcgtcagccacgag 36159 Query: 454 ttctcggcgcgcacgctccgtgaactggagattgccgtgctcgaggcagaggcgctcgac 513 ||||| |||||| ||||||| || || ||| | ||||||||||||| ||||||| ||| Sbjct: 36160 ttctccgcgcgcgcgctccgggacctcgaggtcaccgtgctcgaggccgaggcgcgggac 36219 Query: 514 cgcctcgtcccggcgctggacgcggc 539 ||||||||||||||||| | |||||| Sbjct: 36220 cgcctcgtcccggcgctcgccgcggc 36245
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 345 bits (174), Expect = 1e-91 Identities = 333/386 (86%) Strand = Plus / Plus Query: 154 agctacccggtcatcggctgcctcgtcgccttctacgagaaccggcggcgcctccttgac 213 ||||||||||| ||||| ||||| || || |||||| ||||||||||| || || ||| Sbjct: 135685 agctacccggtgatcgggtgcctggtggcgttctaccgcaaccggcggcggctgctggac 135744 Query: 214 tggtacaccgagatgctgtcggcctcgcccacccagacgatcgtcgttgaccgcctgggc 273 |||||||| ||||||||| |||| ||||| | |||||||||||||||||||| |||||| Sbjct: 135745 tggtacacggagatgctggcggcgtcgccgtcgcagacgatcgtcgttgaccggctgggc 135804 Query: 274 gcgcgccggaccgtggtgaccgcgaacccggccaacgtcgagtacatcctcctgggcaac 333 ||||| || || |||||||| ||||||||||| ||||||||| ||||||||| || | Sbjct: 135805 gcgcggcgcacggtggtgacggcgaacccggcgaacgtcgagcacatcctccgggcgagg 135864 Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135865 ttcgccaactaccccaaggggaagccgttcaccgacgtgctcggcgacctgctcggcatg 135924 Query: 394 ggcatcttcaacgtcgacggcgacaagtggtacgcccagcggaagctggtcagccacgag 453 ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||| Sbjct: 135925 ggcatcttcaacgtcgacggcgagctctggcacgcccagcgcaagctcgtcagccacgag 135984 Query: 454 ttctcggcgcgcacgctccgtgaactggagattgccgtgctcgaggcagaggcgctcgac 513 ||||| |||||| ||||||| || || ||| | ||||||||||||| ||||||| ||| Sbjct: 135985 ttctccgcgcgcgcgctccgggacctcgaggtcaccgtgctcgaggccgaggcgcgggac 136044 Query: 514 cgcctcgtcccggcgctggacgcggc 539 ||||||||||||||||| | |||||| Sbjct: 136045 cgcctcgtcccggcgctcgccgcggc 136070
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 345 bits (174), Expect = 1e-91 Identities = 333/386 (86%) Strand = Plus / Plus Query: 154 agctacccggtcatcggctgcctcgtcgccttctacgagaaccggcggcgcctccttgac 213 ||||||||||| ||||| ||||| || || |||||| ||||||||||| || || ||| Sbjct: 16395250 agctacccggtgatcgggtgcctggtggcgttctaccgcaaccggcggcggctgctggac 16395309 Query: 214 tggtacaccgagatgctgtcggcctcgcccacccagacgatcgtcgttgaccgcctgggc 273 |||||||| ||||||||| |||| ||||| | |||||||||||||||||||| |||||| Sbjct: 16395310 tggtacacggagatgctggcggcgtcgccgtcgcagacgatcgtcgttgaccggctgggc 16395369 Query: 274 gcgcgccggaccgtggtgaccgcgaacccggccaacgtcgagtacatcctcctgggcaac 333 ||||| || || |||||||| ||||||||||| ||||||||| ||||||||| || | Sbjct: 16395370 gcgcggcgcacggtggtgacggcgaacccggcgaacgtcgagcacatcctccgggcgagg 16395429 Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 16395430 ttcgccaactaccccaaggggaagccgttcaccgacgtgctcggcgacctgctcggcatg 16395489 Query: 394 ggcatcttcaacgtcgacggcgacaagtggtacgcccagcggaagctggtcagccacgag 453 ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||| Sbjct: 16395490 ggcatcttcaacgtcgacggcgagctctggcacgcccagcgcaagctcgtcagccacgag 16395549 Query: 454 ttctcggcgcgcacgctccgtgaactggagattgccgtgctcgaggcagaggcgctcgac 513 ||||| |||||| ||||||| || || ||| | ||||||||||||| ||||||| ||| Sbjct: 16395550 ttctccgcgcgcgcgctccgggacctcgaggtcaccgtgctcgaggccgaggcgcgggac 16395609 Query: 514 cgcctcgtcccggcgctggacgcggc 539 ||||||||||||||||| | |||||| Sbjct: 16395610 cgcctcgtcccggcgctcgccgcggc 16395635 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 2374755 ttcgacaacttccccaaggggaggcccttcgccgcgctcctcggcgacctcctcggcgac 2374696 Query: 394 ggcatcttcaacgtcgacggc 414 ||||||||||||||||||||| Sbjct: 2374695 ggcatcttcaacgtcgacggc 2374675
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 345 bits (174), Expect = 1e-91 Identities = 333/386 (86%) Strand = Plus / Plus Query: 154 agctacccggtcatcggctgcctcgtcgccttctacgagaaccggcggcgcctccttgac 213 ||||||||||| ||||| ||||| || || |||||| ||||||||||| || || ||| Sbjct: 16486265 agctacccggtgatcgggtgcctggtggcgttctaccgcaaccggcggcggctgctggac 16486324 Query: 214 tggtacaccgagatgctgtcggcctcgcccacccagacgatcgtcgttgaccgcctgggc 273 |||||||| ||||||||| |||| ||||| | |||||||||||||||||||| |||||| Sbjct: 16486325 tggtacacggagatgctggcggcgtcgccgtcgcagacgatcgtcgttgaccggctgggc 16486384 Query: 274 gcgcgccggaccgtggtgaccgcgaacccggccaacgtcgagtacatcctcctgggcaac 333 ||||| || || |||||||| ||||||||||| ||||||||| ||||||||| || | Sbjct: 16486385 gcgcggcgcacggtggtgacggcgaacccggcgaacgtcgagcacatcctccgggcgagg 16486444 Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 16486445 ttcgccaactaccccaaggggaagccgttcaccgacgtgctcggcgacctgctcggcatg 16486504 Query: 394 ggcatcttcaacgtcgacggcgacaagtggtacgcccagcggaagctggtcagccacgag 453 ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||| Sbjct: 16486505 ggcatcttcaacgtcgacggcgagctctggcacgcccagcgcaagctcgtcagccacgag 16486564 Query: 454 ttctcggcgcgcacgctccgtgaactggagattgccgtgctcgaggcagaggcgctcgac 513 ||||| |||||| ||||||| || || ||| | ||||||||||||| ||||||| ||| Sbjct: 16486565 ttctccgcgcgcgcgctccgggacctcgaggtcaccgtgctcgaggccgaggcgcgggac 16486624 Query: 514 cgcctcgtcccggcgctggacgcggc 539 ||||||||||||||||| | |||||| Sbjct: 16486625 cgcctcgtcccggcgctcgccgcggc 16486650 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 2382537 ttcgacaacttccccaaggggaggcccttcgccgcgctcctcggcgacctcctcggcgac 2382478 Query: 394 ggcatcttcaacgtcgacggc 414 ||||||||||||||||||||| Sbjct: 2382477 ggcatcttcaacgtcgacggc 2382457
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 186 bits (94), Expect = 5e-44 Identities = 181/210 (86%) Strand = Plus / Minus Query: 247 cagacgatcgtcgttgaccgcctgggcgcgcgccggaccgtggtgaccgcgaacccggcc 306 ||||| |||||||| |||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 14911844 cagaccatcgtcgtcgaccgcctcggcgcgcgccgcaccgtggtcacggcgaacccggtg 14911785 Query: 307 aacgtcgagtacatcctcctgggcaacttcggcaactaccccaaggggaagcctttcacc 366 ||||||||| || ||||| || |||||||| |||||||||||||||||| | ||||| Sbjct: 14911784 aacgtcgagcacgtcctcagggcgaacttcgggaactaccccaaggggaaggcgttcacg 14911725 Query: 367 gacgtgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtac 426 |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| | Sbjct: 14911724 gacgtgctcggcgatctgctcggcggcggcatcttcaacgccgacggcgagcggtggttc 14911665 Query: 427 gcccagcggaagctggtcagccacgagttc 456 || |||||||||||||| |||||||||||| Sbjct: 14911664 gcgcagcggaagctggtgagccacgagttc 14911635 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 333 cttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaa 392 ||||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 2468340 cttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcga 2468281 Query: 393 tggcatcttcaacgtcgacggcgac 417 |||||||||||||||||||||||| Sbjct: 2468280 cggcatcttcaacgtcgacggcgac 2468256 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ccgggcggcggcgccgtcgac 567 ||||||||||||||||||||| Sbjct: 4253026 ccgggcggcggcgccgtcgac 4253046
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 186 bits (94), Expect = 5e-44 Identities = 181/210 (86%) Strand = Plus / Minus Query: 247 cagacgatcgtcgttgaccgcctgggcgcgcgccggaccgtggtgaccgcgaacccggcc 306 ||||| |||||||| |||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 14866127 cagaccatcgtcgtcgaccgcctcggcgcgcgccgcaccgtggtcacggcgaacccggtg 14866068 Query: 307 aacgtcgagtacatcctcctgggcaacttcggcaactaccccaaggggaagcctttcacc 366 ||||||||| || ||||| || |||||||| |||||||||||||||||| | ||||| Sbjct: 14866067 aacgtcgagcacgtcctcagggcgaacttcgggaactaccccaaggggaaggcgttcacg 14866008 Query: 367 gacgtgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtac 426 |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| | Sbjct: 14866007 gacgtgctcggcgatctgctcggcggcggcatcttcaacgccgacggcgagcggtggttc 14865948 Query: 427 gcccagcggaagctggtcagccacgagttc 456 || |||||||||||||| |||||||||||| Sbjct: 14865947 gcgcagcggaagctggtgagccacgagttc 14865918 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 333 cttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaa 392 ||||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 2468284 cttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcga 2468225 Query: 393 tggcatcttcaacgtcgacggcgac 417 |||||||||||||||||||||||| Sbjct: 2468224 cggcatcttcaacgtcgacggcgac 2468200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ccgggcggcggcgccgtcgac 567 ||||||||||||||||||||| Sbjct: 4253013 ccgggcggcggcgccgtcgac 4253033
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 186 bits (94), Expect = 5e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 247 cagacgatcgtcgttgaccgcctgggcgcgcgccggaccgtggtgaccgcgaacccggcc 306 ||||| |||||||| |||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 8042 cagaccatcgtcgtcgaccgcctcggcgcgcgccgcaccgtggtcacggcgaacccggtg 8101 Query: 307 aacgtcgagtacatcctcctgggcaacttcggcaactaccccaaggggaagcctttcacc 366 ||||||||| || ||||| || |||||||| |||||||||||||||||| | ||||| Sbjct: 8102 aacgtcgagcacgtcctcagggcgaacttcgggaactaccccaaggggaaggcgttcacg 8161 Query: 367 gacgtgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtac 426 |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| | Sbjct: 8162 gacgtgctcggcgatctgctcggcggcggcatcttcaacgccgacggcgagcggtggttc 8221 Query: 427 gcccagcggaagctggtcagccacgagttc 456 || |||||||||||||| |||||||||||| Sbjct: 8222 gcgcagcggaagctggtgagccacgagttc 8251
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 186 bits (94), Expect = 5e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 247 cagacgatcgtcgttgaccgcctgggcgcgcgccggaccgtggtgaccgcgaacccggcc 306 ||||| |||||||| |||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 170003 cagaccatcgtcgtcgaccgcctcggcgcgcgccgcaccgtggtcacggcgaacccggtg 170062 Query: 307 aacgtcgagtacatcctcctgggcaacttcggcaactaccccaaggggaagcctttcacc 366 ||||||||| || ||||| || |||||||| |||||||||||||||||| | ||||| Sbjct: 170063 aacgtcgagcacgtcctcagggcgaacttcgggaactaccccaaggggaaggcgttcacg 170122 Query: 367 gacgtgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtac 426 |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| | Sbjct: 170123 gacgtgctcggcgatctgctcggcggcggcatcttcaacgccgacggcgagcggtggttc 170182 Query: 427 gcccagcggaagctggtcagccacgagttc 456 || |||||||||||||| |||||||||||| Sbjct: 170183 gcgcagcggaagctggtgagccacgagttc 170212
>dbj|AK064287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H01, full insert sequence Length = 1772 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 333 cttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaa 392 ||||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 411 cttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcga 470 Query: 393 tggcatcttcaacgtcgacggcgac 417 |||||||||||||||||||||||| Sbjct: 471 cggcatcttcaacgtcgacggcgac 495
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 333 cttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaa 392 ||||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 75152 cttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcga 75211 Query: 393 tggcatcttcaacgtcgacggcgac 417 |||||||||||||||||||||||| Sbjct: 75212 cggcatcttcaacgtcgacggcgac 75236
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 150754 ttcgacaacttccccaaggggaggcccttcgccgcgctcctcggcgacctcctcggcgac 150695 Query: 394 ggcatcttcaacgtcgacggc 414 ||||||||||||||||||||| Sbjct: 150694 ggcatcttcaacgtcgacggc 150674
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 26898 ttcgacaacttccccaaggggaggcccttcgccgcgctcctcggcgacctcctcggcgac 26839 Query: 394 ggcatcttcaacgtcgacggc 414 ||||||||||||||||||||| Sbjct: 26838 ggcatcttcaacgtcgacggc 26818
>dbj|AK106404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G11, full insert sequence Length = 1871 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 334 ttcggcaactaccccaaggggaagcctttcaccgacgtgctcggcgacctgctcggcaat 393 |||| ||||| ||||||||||| ||| ||| ||| | ||||||||||| |||||| | Sbjct: 376 ttcgacaacttccccaaggggaggcccttcgccgcgctcctcggcgacctcctcggcgac 435 Query: 394 ggcatcttcaacgtcgacggc 414 ||||||||||||||||||||| Sbjct: 436 ggcatcttcaacgtcgacggc 456
>ref|XM_466535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaagggg 354 ||||||||||||||| || | ||| || ||||||||||||||||||||||||| Sbjct: 131 ccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaagggg 184
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaagggg 354 ||||||||||||||| || | ||| || ||||||||||||||||||||||||| Sbjct: 23173892 ccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaagggg 23173839 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtacgcccagcgga 436 |||||||||||||| | |||||||||||| ||||||||| | |||| ||| ||||||| Sbjct: 27083259 gcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcgga 27083200 Query: 437 ag 438 || Sbjct: 27083199 ag 27083198 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 accgcctcgtcccggcgctg 531 |||||||||||||||||||| Sbjct: 18159325 accgcctcgtcccggcgctg 18159306
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaagggg 354 ||||||||||||||| || | ||| || ||||||||||||||||||||||||| Sbjct: 31123 ccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaagggg 31070
>dbj|AK109775.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B04, full insert sequence Length = 1746 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaagggg 354 ||||||||||||||| || | ||| || ||||||||||||||||||||||||| Sbjct: 131 ccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaagggg 184
>ref|NM_197440.1| Oryza sativa (japonica cultivar-group) cytochrome P450-like protein (OSJNBb0005J14.27), mRNA Length = 1548 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 350 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 396
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 19894751 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 19894705 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 18891183 ctcggccatggcatcttcaactccgacggcga 18891152
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 91292 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 91338
>dbj|AK104799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A06, full insert sequence Length = 1916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 457 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 503
>dbj|AK099925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M22, full insert sequence Length = 1934 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 449 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 495
>dbj|AK069358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012I12, full insert sequence Length = 1933 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 460 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 506
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 19906027 gcgacctgttcggggatggcatcttcgccgtcgacggcgacaagtgg 19905981 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 18902437 ctcggccatggcatcttcaactccgacggcga 18902406
>ref|NM_190973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| || ||||| || |||||||||||| Sbjct: 253 accgccaacccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaag 312 Query: 352 gg 353 || Sbjct: 313 gg 314
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| || ||||| || |||||||||||| Sbjct: 34108612 accgccaacccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaag 34108671 Query: 352 gg 353 || Sbjct: 34108672 gg 34108673 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 331 aacttcggcaactaccccaagggg 354 |||||||||||||||||||||||| Sbjct: 4420681 aacttcggcaactaccccaagggg 4420704 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| | ||||| | ||||||||||||| Sbjct: 34088131 accgccaacccggccaacgtcgagcacattctcaagactaactttgacaactaccccaag 34088190 Query: 352 gggaagc 358 || |||| Sbjct: 34088191 ggcaagc 34088197 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 379 gacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||||||||| | |||||||||||| ||||||||| Sbjct: 35186239 gacctgctcggcgacggcatcttcaactccgacggcga 35186202 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 371 tgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||| | |||||| |||||||||||||| ||||||||| Sbjct: 34078349 tgctcgtcgacttcctcggccatggcatcttcaactccgacggcga 34078394 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 34068437 ctcggccatggcatcttcaactccgacggcga 34068468
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| || ||||| || |||||||||||| Sbjct: 105090 accgccaacccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaag 105149 Query: 352 gg 353 || Sbjct: 105150 gg 105151 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| | ||||| | ||||||||||||| Sbjct: 84609 accgccaacccggccaacgtcgagcacattctcaagactaactttgacaactaccccaag 84668 Query: 352 gggaagc 358 || |||| Sbjct: 84669 ggcaagc 84675 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 371 tgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||| | |||||| |||||||||||||| ||||||||| Sbjct: 74827 tgctcgtcgacttcctcggccatggcatcttcaactccgacggcga 74872 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 64915 ctcggccatggcatcttcaactccgacggcga 64946
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtacgcccagcgga 436 |||||||||||||| | |||||||||||| ||||||||| | |||| ||| ||||||| Sbjct: 54908 gcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcgga 54849 Query: 437 ag 438 || Sbjct: 54848 ag 54847
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtacgcccagcgga 436 |||||||||||||| | |||||||||||| ||||||||| | |||| ||| ||||||| Sbjct: 136461 gcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcgga 136402 Query: 437 ag 438 || Sbjct: 136401 ag 136400
>dbj|AK070931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B22, full insert sequence Length = 1757 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| || ||||| || |||||||||||| Sbjct: 354 accgccaacccggccaacgtcgagcacattctcaaggctaactttggtaactaccccaag 413 Query: 352 gg 353 || Sbjct: 414 gg 415
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 377 gcgacctgctcggcaatggcatcttcaacgtcgacggcgacaagtggtacgcccagcgga 436 |||||||||||||| | |||||||||||| ||||||||| | |||| ||| ||||||| Sbjct: 469 gcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcgga 528 Query: 437 ag 438 || Sbjct: 529 ag 530
>gb|BT018678.1| Zea mays clone EL01N0511B03.d mRNA sequence Length = 1945 Score = 50.1 bits (25), Expect = 0.008 Identities = 94/117 (80%) Strand = Plus / Plus Query: 298 aacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaaggggaag 357 |||||||||||||| |||||||| ||| | |||||||| ||||| ||||||||| ||| Sbjct: 398 aacccggccaacgtggagtacatgctcaagaccaacttcgacaacttccccaagggcaag 457 Query: 358 cctttcaccgacgtgctcggcgacctgctcggcaatggcatcttcaacgtcgacggc 414 | ||| | | | ||||| ||||| |||||| |||||||||||||| |||||| Sbjct: 458 accttcgcggcgctcctcggggacctcctcggccgcggcatcttcaacgtggacggc 514
>ref|NM_189587.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1788 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 331 aacttcggcaactaccccaagggg 354 |||||||||||||||||||||||| Sbjct: 364 aacttcggcaactaccccaagggg 387
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 331 aacttcggcaactaccccaagggg 354 |||||||||||||||||||||||| Sbjct: 80763 aacttcggcaactaccccaagggg 80786
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 tgccgagccgggcggcggcgccgtcgac 567 ||||||||| |||||||||||||||||| Sbjct: 2028624 tgccgagccaggcggcggcgccgtcgac 2028597
>dbj|AK110852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C07, full insert sequence Length = 1788 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 331 aacttcggcaactaccccaagggg 354 |||||||||||||||||||||||| Sbjct: 364 aacttcggcaactaccccaagggg 387
>ref|NM_190969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 292 accgcgaacccggccaacgtcgagtacatcctcctgggcaacttcggcaactaccccaag 351 ||||| |||||||||||||||||| |||| ||| | ||||| | ||||||||||||| Sbjct: 265 accgccaacccggccaacgtcgagcacattctcaagactaactttgacaactaccccaag 324 Query: 352 gggaagc 358 || |||| Sbjct: 325 ggcaagc 331
>ref|XM_312327.2| Anopheles gambiae str. PEST ENSANGP00000010594 (ENSANGG00000008105), partial mRNA Length = 912 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 536 cggctgccgagccgggcggcggc 558 ||||||||||||||||||||||| Sbjct: 164 cggctgccgagccgggcggcggc 142
>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete sequence Length = 34644 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcggcggcgcc 561 |||||||||||||||||||||| |||| Sbjct: 18905 gcggctgccgagccgggcggcgacgcc 18931
>ref|NM_190387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 379 gacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||||||||| | |||||||||||| ||||||||| Sbjct: 776 gacctgctcggcgacggcatcttcaactccgacggcga 739
>ref|NM_190966.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 371 tgctcggcgacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||| | |||||| |||||||||||||| ||||||||| Sbjct: 335 tgctcgtcgacttcctcggccatggcatcttcaactccgacggcga 380
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 atggcatcttcaacgtcgacggcgac 417 |||||||||||||||| ||||||||| Sbjct: 2152337 atggcatcttcaacgtggacggcgac 2152362 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 ggcaatggcatcttcaacgtcgacggcga 416 ||||| ||||||||||||| ||||||||| Sbjct: 2193956 ggcaacggcatcttcaacgccgacggcga 2193984 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 2205467 caacttcgacaactaccccaaggg 2205490 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 2097314 caacttcgccaactaccccaaggg 2097337
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 atggcatcttcaacgtcgacggcgac 417 |||||||||||||||| ||||||||| Sbjct: 42631 atggcatcttcaacgtggacggcgac 42656 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 ggcaatggcatcttcaacgtcgacggcga 416 ||||| ||||||||||||| ||||||||| Sbjct: 84250 ggcaacggcatcttcaacgccgacggcga 84278 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 95761 caacttcgacaactaccccaaggg 95784
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 atggcatcttcaacgtcgacggcgac 417 |||||||||||||||| ||||||||| Sbjct: 2152349 atggcatcttcaacgtggacggcgac 2152374 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 ggcaatggcatcttcaacgtcgacggcga 416 ||||| ||||||||||||| ||||||||| Sbjct: 2193968 ggcaacggcatcttcaacgccgacggcga 2193996 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 2205479 caacttcgacaactaccccaaggg 2205502 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 2097326 caacttcgccaactaccccaaggg 2097349
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 379 gacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||||||||| | |||||||||||| ||||||||| Sbjct: 65323 gacctgctcggcgacggcatcttcaactccgacggcga 65286
>dbj|AK108946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B12, full insert sequence Length = 1667 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 379 gacctgctcggcaatggcatcttcaacgtcgacggcga 416 |||||||||||| | |||||||||||| ||||||||| Sbjct: 268 gacctgctcggcgacggcatcttcaactccgacggcga 231
>gb|AC092094.19| Mus musculus strain C57BL/6J chromosome 3 clone rp23-261m19, complete sequence Length = 133659 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 agctggtcagccacgagttctc 458 |||||||||||||||||||||| Sbjct: 96926 agctggtcagccacgagttctc 96947
>ref|XM_473579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 241 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 285
>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete sequence Length = 155876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 80458 gccgagccgggcggcggcgcc 80438
>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete sequence Length = 181509 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 6545 gccgagccgggcggcggcgcc 6565
>gb|BC048415.1| Mus musculus bromodomain adjacent to zinc finger domain, 2A, mRNA (cDNA clone IMAGE:6491361), partial cds Length = 2282 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 27 gccgagccgggcggcggcgcc 7
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 gctgccgagccgggcggcggc 558 ||||||||||||||||||||| Sbjct: 4371960 gctgccgagccgggcggcggc 4371940
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 gggcggcggcgccgtcgacat 569 ||||||||||||||||||||| Sbjct: 121277 gggcggcggcgccgtcgacat 121257
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 gggcggcggcgccgtcgacat 569 ||||||||||||||||||||| Sbjct: 32176 gggcggcggcgccgtcgacat 32156
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 gggcggcggcgccgtcgacat 569 ||||||||||||||||||||| Sbjct: 318144 gggcggcggcgccgtcgacat 318124
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 362 tcaccgacgtgctcggcgacctgct 386 |||||||||||| |||||||||||| Sbjct: 200558 tcaccgacgtgcgcggcgacctgct 200534
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 366 cgacgtgctcggcgacctgctcggc 390 ||||| ||||||||||||||||||| Sbjct: 80067 cgacgggctcggcgacctgctcggc 80091 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cgtcccggcgctggacgcgg 538 |||||||||||||||||||| Sbjct: 19359 cgtcccggcgctggacgcgg 19378
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 tgctcggcgacctgctcggca 391 ||||||||||||||||||||| Sbjct: 293140 tgctcggcgacctgctcggca 293160
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 gctgccgagccgggcggcggc 558 ||||||||||||||||||||| Sbjct: 3277113 gctgccgagccgggcggcggc 3277093
>dbj|AK133149.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931403G09 product:bromodomain adjacent to zinc finger domain, 2A, full insert sequence Length = 2446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 27 gccgagccgggcggcggcgcc 7
>dbj|AK140355.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430220N06 product:bromodomain adjacent to zinc finger domain, 2A, full insert sequence Length = 3741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 551 gccgagccgggcggcggcgcc 531
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 ggcaatggcatcttcaacgtcgacggcga 416 ||||| ||||||||||||| ||||||||| Sbjct: 132100 ggcaacggcatcttcaacgccgacggcga 132072 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 120589 caacttcgacaactaccccaaggg 120566
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 28866097 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 28866141 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 15013483 cgggcggcggcgccgtcgac 15013464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 14365079 cgggcggcggcgccgtcgac 14365098 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcgg 554 |||||||||||||||||||| Sbjct: 13009817 gcggctgccgagccgggcgg 13009836
>dbj|AK120901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M24, full insert sequence Length = 1712 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 265 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 309
>dbj|AK119612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-G01, full insert sequence Length = 1714 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 264 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 308
>dbj|AK103182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121J02, full insert sequence Length = 1780 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 266 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 310
>dbj|AK101618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052H03, full insert sequence Length = 1904 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 364 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 408
>gb|DQ340240.1| Glycine max cytochrome P450 monooxygenase CYP86A (CYP86A) mRNA, complete cds Length = 2056 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 383 tgctcggcaatggcatcttcaacgtcgacggcgacaagtgg 423 |||||||| | |||||||||||| ||||||||||| |||| Sbjct: 549 tgctcggcgaaggcatcttcaactccgacggcgacacgtgg 589
>dbj|AK061650.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C03, full insert sequence Length = 1881 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 265 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 309
>gb|AY107645.1| Zea mays PCO100030 mRNA sequence Length = 623 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 cgcggctgccgagccgggcggcggc 558 ||||||||| ||||||||||||||| Sbjct: 195 cgcggctgcggagccgggcggcggc 219
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 cgtgctcggcgacctgctcgg 389 ||||||||||||||||||||| Sbjct: 390905 cgtgctcggcgacctgctcgg 390925
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 ccgggcggcggcgccgtcgac 567 ||||||||||||||||||||| Sbjct: 30757 ccgggcggcggcgccgtcgac 30737
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 ccggccaacgtcgagtacatcctcctgggcaacttcggcaactac 345 ||||||||||||||| |||||||| | |||||||| ||||||| Sbjct: 78259 ccggccaacgtcgagcacatcctcaagaccaacttcgccaactac 78303
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgcc 561 ||||||||||||||||||||| Sbjct: 212830 gccgagccgggcggcggcgcc 212810
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 134737 caacttcgccaactaccccaaggg 134760
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tcggcaatggcatcttcaac 405 |||||||||||||||||||| Sbjct: 2251711 tcggcaatggcatcttcaac 2251730
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ctttgctttcagtttgtggc 83 |||||||||||||||||||| Sbjct: 121331 ctttgctttcagtttgtggc 121350
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 578 cgggcggcggcgccgtcgac 559
>ref|XM_465893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 566 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 accgcctcgtcccggcgctg 531 |||||||||||||||||||| Sbjct: 408 accgcctcgtcccggcgctg 389
>ref|NM_197264.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450-dependent fatty acid hydroxylase (OSJNBb0015K05.16), mRNA Length = 723 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 133 ctcggccatggcatcttcaactccgacggcga 164
>ref|NM_185722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cgagccgggcggcggcgccg 562 |||||||||||||||||||| Sbjct: 412 cgagccgggcggcggcgccg 393
>ref|XM_471795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 539 cgggcggcggcgccgtcgac 520
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ccggaccgtggtgaccgcga 298 |||||||||||||||||||| Sbjct: 4516082 ccggaccgtggtgaccgcga 4516063
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tcggcaatggcatcttcaac 405 |||||||||||||||||||| Sbjct: 2252560 tcggcaatggcatcttcaac 2252579
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 ggcatcttcaacgtcgacggcgac 417 ||||| |||||||||||||||||| Sbjct: 37414 ggcatattcaacgtcgacggcgac 37437
>ref|XM_425103.1| PREDICTED: Gallus gallus similar to Partitioning defective-6 homolog alpha (PAR-6 alpha) (PAR-6A) (PAR-6) (PAR6C) (Tax interaction protein 40) (TIP-40) (LOC427529), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 caccgacgtgctcggcgacctgct 386 ||||||||||| |||||||||||| Sbjct: 396 caccgacgtgcacggcgacctgct 419
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tcgtcgttgaccgcctgggc 273 |||||||||||||||||||| Sbjct: 2647419 tcgtcgttgaccgcctgggc 2647400 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 cgtgctcggcgacctgctcggcaa 392 ||||||||||| |||||||||||| Sbjct: 1485619 cgtgctcggcggcctgctcggcaa 1485596
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ctcggcgacctgctcggcaatggc 396 ||||||| |||||||||||||||| Sbjct: 5571396 ctcggcgtcctgctcggcaatggc 5571419
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 532 gacgcggctgccgagccgggcggcggcg 559 |||||||| | ||||||||||||||||| Sbjct: 2452880 gacgcggccggcgagccgggcggcggcg 2452907
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cttcggcaactaccccaagg 352 |||||||||||||||||||| Sbjct: 4398747 cttcggcaactaccccaagg 4398766
>emb|AL365330.16| Human DNA sequence from clone RP1-286D6 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ32825), a novel gene, the gene for a novel protein (KIAA1185), the 3' end of the gene for glycine- glutamate-thienylcyclohexylpiperidine-binding protein (KIAA0562) and four CpG islands, complete sequence Length = 62238 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgctttgctttcagtttgtg 81 |||||||||||||||||||| Sbjct: 56750 tgctttgctttcagtttgtg 56731
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 3629580 cgggcggcggcgccgtcgac 3629599
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ggaagctggtcagccacgag 453 |||||||||||||||||||| Sbjct: 3683706 ggaagctggtcagccacgag 3683725
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgtgaactggagattgccgt 491 |||||||||||||||||||| Sbjct: 102813 cgtgaactggagattgccgt 102832
>gb|AC160015.2| Mus musculus BAC clone RP23-433E2 from chromosome 9, complete sequence Length = 209970 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 cggcgctggacgcggctgcc 543 |||||||||||||||||||| Sbjct: 60743 cggcgctggacgcggctgcc 60724
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 gccgagccgggcggcggcgc 560 |||||||||||||||||||| Sbjct: 104952 gccgagccgggcggcggcgc 104933
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tgccgagccgggcggcggcg 559 |||||||||||||||||||| Sbjct: 216099 tgccgagccgggcggcggcg 216080
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 tgccgagccgggcggcggcg 559 |||||||||||||||||||| Sbjct: 161052 tgccgagccgggcggcggcg 161071
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 29944 cgggcggcggcgccgtcgac 29925
>emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0068N06, complete sequence Length = 172895 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcgg 554 |||||||||||||||||||| Sbjct: 158880 gcggctgccgagccgggcgg 158899
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 97999 cgggcggcggcgccgtcgac 98018
>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21, complete sequence Length = 151218 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcgg 554 |||||||||||||||||||| Sbjct: 3630 gcggctgccgagccgggcgg 3649
>emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, padA gene, padB gene, padC gene, padD gene, padE gene, padF gene, padG gene, padH gene, padI gene, padJ gene, ORFA, ORFB and ORFC Length = 16922 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tgccgagccgggcggcggcg 559 |||||||||||||||||||| Sbjct: 16387 tgccgagccgggcggcggcg 16368
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ctcggcgacctgctcggcaatggc 396 |||||||||||||||||| ||||| Sbjct: 1816 ctcggcgacctgctcggccatggc 1839
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 ctcggcaatggcatcttcaacgtcgacggcga 416 |||||| |||||||||||||| ||||||||| Sbjct: 103858 ctcggccatggcatcttcaactccgacggcga 103889
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cttcggcaactaccccaagg 352 |||||||||||||||||||| Sbjct: 680333 cttcggcaactaccccaagg 680314
>gb|DQ378281.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 26E5, complete sequence Length = 40479 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 catgctttgctttcagtttg 79 |||||||||||||||||||| Sbjct: 25245 catgctttgctttcagtttg 25264
>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence Length = 158314 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ctcctgtttcttctctactt 110 |||||||||||||||||||| Sbjct: 126315 ctcctgtttcttctctactt 126334
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctttgttctgactatattcactag 35 |||| ||||||||||||||||||| Sbjct: 35298 cttttttctgactatattcactag 35321
>dbj|AK053403.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130014G18 product:unclassifiable, full insert sequence Length = 2968 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cggcgctggacgcggctgcc 543 |||||||||||||||||||| Sbjct: 386 cggcgctggacgcggctgcc 405
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cgagccgggcggcggcgccg 562 |||||||||||||||||||| Sbjct: 21654468 cgagccgggcggcggcgccg 21654449
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcgg 554 |||||||||||||||||||| Sbjct: 18474442 gcggctgccgagccgggcgg 18474461
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 ggcatcttcaacgtcgacggcgac 417 ||||| |||||||||||||||||| Sbjct: 21646238 ggcatattcaacgtcgacggcgac 21646261
>gb|AF123609.1|AF123609 Triticum aestivum clone CYP86-TA cytochrome P450 mRNA, complete cds Length = 2181 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 379 gacctgctcggcaatggcatcttcaacgtcgacggcgaca 418 |||||||||||| | ||||||||||| ||||||||||| Sbjct: 448 gacctgctcggcgacggcatcttcaattccgacggcgaca 487
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cgagccgggcggcggcgccg 562 |||||||||||||||||||| Sbjct: 3427631 cgagccgggcggcggcgccg 3427650 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 cgtgctcggcgacctgctcg 388 |||||||||||||||||||| Sbjct: 455239 cgtgctcggcgacctgctcg 455258
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 gcggctgccgagccgggcgg 554 |||||||||||||||||||| Sbjct: 57325 gcggctgccgagccgggcgg 57344
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 accgcctcgtcccggcgctg 531 |||||||||||||||||||| Sbjct: 82726 accgcctcgtcccggcgctg 82707
>dbj|AK111423.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G11, full insert sequence Length = 1730 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 ggcatcttcaacgtcgacggcgac 417 ||||| |||||||||||||||||| Sbjct: 1170 ggcatattcaacgtcgacggcgac 1147
>dbj|AK107967.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-D03, full insert sequence Length = 566 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 accgcctcgtcccggcgctg 531 |||||||||||||||||||| Sbjct: 408 accgcctcgtcccggcgctg 389
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 1348 caacttcgacaactaccccaaggg 1325
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full insert sequence Length = 1457 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 774 cgggcggcggcgccgtcgac 793
>dbj|AK105857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H07, full insert sequence Length = 1723 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 366 caacttcgccaactaccccaaggg 389
>dbj|AK105264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D01, full insert sequence Length = 2395 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 ggcatcttcaacgtcgacggcgac 417 ||||| |||||||||||||||||| Sbjct: 508 ggcatattcaacgtcgacggcgac 531
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 cgaggcagaggcgctcgaccgcct 518 |||||| ||||||||||||||||| Sbjct: 5048842 cgaggccgaggcgctcgaccgcct 5048819
>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1612_A04 Length = 124833 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cgagccgggcggcggcgccg 562 |||||||||||||||||||| Sbjct: 84924 cgagccgggcggcggcgccg 84905
>gb|AY109756.1| Zea mays CL309_1 mRNA sequence Length = 1914 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 caacttcggcaactaccccaaggg 353 |||||||| ||||||||||||||| Sbjct: 365 caacttcgccaactaccccaaggg 388
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cttcggcaactaccccaagg 352 |||||||||||||||||||| Sbjct: 710799 cttcggcaactaccccaagg 710780
>emb|AJ617740.1| Pseudomonas putida clc transposon Length = 105027 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cgggcggcggcgccgtcgac 567 |||||||||||||||||||| Sbjct: 34537 cgggcggcggcgccgtcgac 34518
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 ggctgccgagccgggcggcg 556 |||||||||||||||||||| Sbjct: 3468899 ggctgccgagccgggcggcg 3468880
>emb|CT025676.10| Mouse DNA sequence from clone RP24-372B7 on chromosome 9, complete sequence Length = 174177 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 cggcgctggacgcggctgcc 543 |||||||||||||||||||| Sbjct: 59781 cggcgctggacgcggctgcc 59800
>dbj|AB045134.1| Desulfovibrio vulgaris hemA gene for glutamyl-tRNA reductase, complete cds Length = 1509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 ccgcctcgtcccggcgctgg 532 |||||||||||||||||||| Sbjct: 1054 ccgcctcgtcccggcgctgg 1035 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,953,853 Number of Sequences: 3902068 Number of extensions: 3953853 Number of successful extensions: 100284 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95767 Number of HSP's gapped (non-prelim): 4506 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
