ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108991.1| Zea mays PCO060303 mRNA sequence Length = 487 Score = 143 bits (72), Expect = 7e-31 Identities = 140/162 (86%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 98 atgtcgatcaagcactgtgacaagcac---gactgcgagcggcggcggctgtaccgccag 154 |||||||||||| |||| ||| ||||| ||||||||||||| ||| |||||||| | Sbjct: 177 atgtcgatcaagtactgcgaccagcacaaggactgcgagcggcagcgtctgtaccgtcgc 236 Query: 155 ttctgcgccgccctggtggccatcatcctgctcatcctcctcatcatcctcatcgtctgg 214 ||||||||||||||||||| | ||||| ||||| ||||||||||| | |||||||||||| Sbjct: 237 ttctgcgccgccctggtgggcgtcatcgtgctcgtcctcctcatcgtgctcatcgtctgg 296 Query: 215 ctcgtgctccgccccaccagaccgcgcttctacctcaacgac 256 ||||| ||||||||||||| || ||||||| |||||||||| Sbjct: 297 ctcgtcctccgccccaccaagcctcgcttcttcctcaacgac 338 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 296 tcctacctcaccgtgacgctgcaggcgacgattgccgcccgcaaccccaacacccgcgtc 355 |||||||||||||| || ||||||| ||| | || | |||||| ||||| ||||||| Sbjct: 372 tcctacctcaccgtcaccatgcaggccacgctggcgtcgcgcaacaccaacgaccgcgtc 431 Query: 356 ggcatctacttcgaccggacggacgcctacgccgagtac 394 |||||||||| |||||| | |||| |||||||||||| Sbjct: 432 ggcatctactacgaccgcgccgacgtgtacgccgagtac 470
>ref|XM_479660.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1046 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 198 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 257 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 258 tcaacgacctcaccgt 273 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 371 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 430 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 431 gagtacaaggg 441
>ref|XM_507421.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1218 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 194 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 253 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 254 tcaacgacctcaccgt 269 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 367 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 426 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 427 gagtacaaggg 437
>ref|XM_507420.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1386 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 362 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 421 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 422 tcaacgacctcaccgt 437 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 535 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 594 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 595 gagtacaaggg 605
>ref|XM_507419.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1520 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 440 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 499 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 500 tcaacgacctcaccgt 515 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 613 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 672 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 673 gagtacaaggg 683
>ref|XM_507418.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1211 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 105 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 164 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 165 tcaacgacctcaccgt 180 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 278 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 337 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 338 gagtacaaggg 348
>ref|XM_507417.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1323 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 217 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 276 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 277 tcaacgacctcaccgt 292 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 390 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 449 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 450 gagtacaaggg 460
>ref|XM_506616.2| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1445 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 339 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 398 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 399 tcaacgacctcaccgt 414 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 512 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 571 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 572 gagtacaaggg 582
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 146667 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 146608 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 146607 tcaacgacctcaccgt 146592 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 146494 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 146435 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 146434 gagtacaaggg 146424 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 tgctcatcctcctcatcatcctcatcgtc 211 ||||| ||||||||||| ||||||||||| Sbjct: 947683 tgctcctcctcctcatcctcctcatcgtc 947655
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 62002 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 61943 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 61942 tcaacgacctcaccgt 61927 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 61829 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 61770 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 61769 gagtacaaggg 61759
>dbj|AK104488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B05, full insert sequence Length = 1219 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 194 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 253 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 254 tcaacgacctcaccgt 269 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 367 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 426 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 427 gagtacaaggg 437
>dbj|AK099239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B02, full insert sequence Length = 1386 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 362 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 421 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 422 tcaacgacctcaccgt 437 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 535 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 594 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 595 gagtacaaggg 605
>dbj|AK072003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H23, full insert sequence Length = 1445 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 339 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 398 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 399 tcaacgacctcaccgt 414 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 512 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 571 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 572 gagtacaaggg 582
>dbj|AK067526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O20, full insert sequence Length = 1520 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 440 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 499 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 500 tcaacgacctcaccgt 515 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 613 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 672 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 673 gagtacaaggg 683
>dbj|AK061780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D12, full insert sequence Length = 1323 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 217 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 276 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 277 tcaacgacctcaccgt 292 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 390 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 449 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 450 gagtacaaggg 460
>dbj|AK061546.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A05, full insert sequence Length = 1211 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 105 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 164 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 165 tcaacgacctcaccgt 180 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 278 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 337 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 338 gagtacaaggg 348
>dbj|AK061430.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H04, full insert sequence Length = 1046 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacc 248 ||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 198 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 257 Query: 249 tcaacgacctcaccgt 264 |||||||||||||||| Sbjct: 258 tcaacgacctcaccgt 273 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 388 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 371 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 430 Query: 389 gagtacaaggg 399 ||||||||||| Sbjct: 431 gagtacaaggg 441
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatcgtctg 213 |||||||| |||||||||||||| |||||||||| Sbjct: 123277 tcctgctcctcctcctcatcatcatcatcgtctg 123244
>ref|XM_662235.1| Cryptosporidium hominis TU502 CCAAT-box-binding transcription factor (Chro.80478) partial mRNA Length = 3273 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||||||||||||||| |||||||| Sbjct: 3097 catcatcctcctcatcctcctcatcctcctcatc 3064 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 176 atcatcctgctcatcctcctcatcatcctcatc 208 |||||||| |||||||||||||| |||||||| Sbjct: 3105 atcatcctcatcatcctcctcatcctcctcatc 3073
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgt 210 ||||||| ||||||||||||||| |||||||||| Sbjct: 1289483 tcatcctcctcatcctcctcatcctcctcatcgt 1289450 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 1289492 tcatcctcctcatcctcctcatcctcctcatc 1289461 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 1289493 ctcatcctcctcatcctcctcatc 1289470
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatcg 209 |||| ||||||||||||||||||||||||| Sbjct: 767903 tcctcctcatcctcctcatcatcctcatcg 767874
>gb|AC126408.6| Mus musculus chromosome 13, clone RP23-216P14, complete sequence Length = 238967 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 74 agaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||||||| Sbjct: 108118 agaagaaaaaagaggaggaagaaga 108094
>gb|AC133205.3| Mus musculus BAC clone RP23-108P11 from chromosome 13, complete sequence Length = 205640 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 74 agaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||||||| Sbjct: 31961 agaagaaaaaagaggaggaagaaga 31937
>emb|AL031843.2|HS246D7 Human DNA sequence from clone RP1-246D7 on chromosome 22q13.1-13.33, complete sequence Length = 28011 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||||| ||| ||||||||||||||||| ||||| Sbjct: 21771 catcatcctcctcgtcctcctcatcatcctcctcgtc 21807
>gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, complete sequence Length = 152057 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 74 agaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||||||| Sbjct: 151727 agaagaaaaaagaggaggaagaaga 151751
>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence Length = 198935 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 74 agaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||||||| Sbjct: 192363 agaagaaaaaagaggaggaagaaga 192339
>gb|AC161870.4| Mus musculus BAC clone RP24-70M22 from chromosome 14, complete sequence Length = 240578 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 93416 tcatcctcctcatcctcctcatcctcctcatc 93385 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 93417 ctcatcctcctcatcctcctcatc 93394
>gb|BC008716.2| Homo sapiens discoidin domain receptor family, member 1, transcript variant 2, mRNA (cDNA clone MGC:8681 IMAGE:2964574), complete cds Length = 3840 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>gb|BC013400.2| Homo sapiens discoidin domain receptor family, member 1, transcript variant 2, mRNA (cDNA clone MGC:3909 IMAGE:2964574), complete cds Length = 3840 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence Length = 174009 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaaga 95 |||||||||||||||||||||||| Sbjct: 121243 gaagaagaaaaaagaggaggaaga 121220
>ref|NM_013994.2| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 3, mRNA Length = 3678 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1308 cctggtggccatcatcctgctcctgctgctcatcat 1343
>ref|NM_013993.2| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 1, mRNA Length = 3877 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1525 cctggtggccatcatcctgctcctgctgctcatcat 1560
>gb|AC142107.2| Mus musculus BAC clone RP24-192I1 from chromosome 14, complete sequence Length = 160766 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 38995 tcatcctcctcatcctcctcatcctcctcatc 39026 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 38994 ctcatcctcctcatcctcctcatc 39017
>ref|NM_001954.3| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 2, mRNA Length = 3840 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>ref|XM_658404.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5892.2), mRNA Length = 2229 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 488 tcatcctcctcatcctcctcatcctcctcatc 457 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctc 205 ||||||| ||||||||||||||| ||||| Sbjct: 479 tcatcctcctcatcctcctcatcctcctc 451 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcct 204 ||||||| |||||||||||| ||||||| Sbjct: 470 tcatcctcctcatcctcctcctcatcct 443
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 233282 tcatcctcctcatcctcctcatcctcctcatc 233251 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 233219 tcatcctcctcatcctcctcatcctcctcatc 233188 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 233180 tcatcctcctcatcctcctcatcctcctcatc 233149 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 233147 tcatcctcctcatcctcctcatcctcctcatc 233116 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 233360 tcctcctcatcctcctcatcctcctcatc 233332 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 233312 tcctcctcatcctcctcatcctcctcatc 233284 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 233283 ctcatcctcctcatcctcctcatc 233260 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 233244 ctcatcctcctcatcctcctcatc 233221 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 233220 ctcatcctcctcatcctcctcatc 233197 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 233181 ctcatcctcctcatcctcctcatc 233158 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 233148 ctcatcctcctcatcctcctcatc 233125 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||| || ||||||||||| Sbjct: 233003 tcatcctcctcatcctcttcctcatcctcatc 232972
>emb|CR788303.14| Zebrafish DNA sequence from clone DKEY-178E17 in linkage group 8, complete sequence Length = 175313 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaagat 99 ||||||||| |||||||||||||||||| Sbjct: 165399 gaagaagaagaaagaggaggaagaagat 165372
>gb|AC113114.9| Mus musculus chromosome 17, clone RP23-338H10, complete sequence Length = 183828 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| |||||||||||| ||||||||||| Sbjct: 86221 tcatcctcctcatcctcctcctcatcctcatc 86190
>ref|XM_671331.1| Plasmodium berghei strain ANKA hypothetical protein (PB000807.03.0) partial mRNA Length = 2199 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 1223 tcatcctcctcatcctcctcatcctcctcatc 1192 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 1224 ctcatcctcctcatcctcctcatc 1201 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctcatc 208 ||||||||||||||| |||||||| Sbjct: 1185 ctcatcctcctcatcctcctcatc 1162
>ref|NM_013137.1| Rattus norvegicus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 2733 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 1257 cctggtggccatcatccttctcctcctccttatcat 1292
>emb|AL773589.3| Human DNA sequence from clone DAQB-196C18 on chromosome 6 Contains the central part of the DDR1 gene for discoidin domain receptor family, member 1, and no CpG islands, complete sequence Length = 15168 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 11070 cctggtggccatcatcctgctcctgctgctcatcat 11105
>emb|AL662870.16| Human DNA sequence from clone XXbac-70P20 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, a putative novel transcript and two CpG islands, complete sequence Length = 61698 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 46800 cctggtggccatcatcctgctcctgctgctcatcat 46835
>emb|AL662854.7| Human DNA sequence from clone XXbac-105N19 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcrition factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, two putative novel transcripts, the gene for DPCR1 protein and four CpG islands, complete sequence Length = 84474 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 17937 cctggtggccatcatcctgctcctgctgctcatcat 17972
>emb|Z29093.1|HSRETYK1 H.sapiens EDDR1 gene for receptor tyrosine kinase Length = 3841 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1602 cctggtggccatcatcctgctcctgctgctcatcat 1637
>emb|X74979.1|HSTRKE H.sapiens TRK E mRNA Length = 3554 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1311 cctggtggccatcatcctgctcctgctgctcatcat 1346
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 266765 cctggtggccatcatccttctcctcctccttatcat 266730
>gb|BT008202.1| Synthetic construct Homo sapiens discoidin domain receptor family, member 1 mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|BC070070.1| Homo sapiens discoidin domain receptor family, member 1, mRNA (cDNA clone MGC:87336 IMAGE:5262509), complete cds Length = 3609 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1370 cctggtggccatcatcctgctcctgctgctcatcat 1405
>emb|CR759747.7| Human DNA sequence from clone DADB-160J14 on chromosome 6, complete sequence Length = 114883 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 9152 cctggtggccatcatcctgctcctgctgctcatcat 9187
>dbj|AB210150.1| Pan troglodytes DDR1 gene for discoidin receptor tyrosine kinase isoform b, complete cds, cell_line: Ericka Length = 14676 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 5977 cctggtggccatcatcctgctcctgctgctcatcat 6012
>dbj|AB210149.1| Pan troglodytes DDR1 gene for discoidin receptor tyrosine kinase isoform b, complete cds, cell_line: Borie Length = 14676 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 5977 cctggtggccatcatcctgctcctgctgctcatcat 6012
>dbj|AB202100.1| Homo sapiens DDR1 gene for discoidin domain receptor family, member 1, complete cds Length = 14673 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 5964 cctggtggccatcatcctgctcctgctgctcatcat 5999
>gb|AC084701.5| Homo sapiens chromosome 18, clone RP11-1005F9, complete sequence Length = 140712 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaaga 95 |||||||||||||||||||||||| Sbjct: 73579 gaagaagaaaaaagaggaggaaga 73602
>dbj|AK137232.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530059B22 product:hypothetical protein, full insert sequence Length = 3323 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaaga 95 |||||||||||||||||||||||| Sbjct: 1161 gaagaagaaaaaagaggaggaaga 1138
>gb|AC171140.2| Helobdella robusta clone CH306-1B2, complete sequence Length = 105143 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||| |||||||||||||| Sbjct: 64549 tcatcctcctcatcctcatcatcatcctcatc 64518
>emb|BX927194.9| Human DNA sequence from clone DAMA-342O2 on chromosome 6, complete sequence Length = 110208 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 67195 cctggtggccatcatcctgctcctgctgctcatcat 67230
>gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence Length = 164324 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaaga 95 |||||||||||||||||||||||| Sbjct: 21792 gaagaagaaaaaagaggaggaaga 21769
>gb|S77556.1| Ptk-3S=radiation-induced gene {alternatively spliced} [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 549 nt] Length = 549 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 57 cctggtggccatcatccttctcctcctccttatcat 92
>gb|S77585.1| Ptk-3L=radiation-induced gene [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 660 nt] Length = 660 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 57 cctggtggccatcatccttctcctcctccttatcat 92
>gb|AY335786.1| Synthetic construct Homo sapiens discoidin domain receptor family, member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 179295 cctggtggccatcatcctgctcctgctgctcatcat 179330
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 80765 cctggtggccatcatcctgctcctgctgctcatcat 80800
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 2979463 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 2979424 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 202 cctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacctc 250 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 2979603 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 2979555 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gaagaagatgtcgatcaagc 110 |||||||||||||||||||| Sbjct: 14373431 gaagaagatgtcgatcaagc 14373412
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1546758 cctggtggccatcatcctgctcctgctgctcatcat 1546723
>dbj|AB210021.1| Homo sapiens mRNA for DDR1 variant protein, partial cds, clone: fk11093 Length = 3641 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1420 cctggtggccatcatcctgctcctgctgctcatcat 1455
>gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complete sequence Length = 112003 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 73 aagaagaaaaaagaggaggaagaa 96 |||||||||||||||||||||||| Sbjct: 42297 aagaagaaaaaagaggaggaagaa 42320
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1048747 cctggtggccatcatcctgctcctgctgctcatcat 1048712
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 622871 cctggtggccatcatcctgctcctgctgctcatcat 622836
>gb|AY892205.1| Synthetic construct Homo sapiens clone FLH012771.01L discoidin domain receptor family member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|AY892204.1| Synthetic construct Homo sapiens clone FLH012770.01L discoidin domain receptor family member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>dbj|AK130776.1| Homo sapiens cDNA FLJ27266 fis, clone TMS00356, highly similar to Epithelial discoidin domain receptor 1 precursor (EC 2.7.1.112) Length = 1593 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 654 cctggtggccatcatcctgctcctgctgctcatcat 689
>gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome Length = 108409 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62988 tcatcctcctcatcctcctcatcctcctcatc 63019 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62979 tcatcctcctcatcctcctcatcctcctcatc 63010 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62970 tcatcctcctcatcctcctcatcctcctcatc 63001 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62961 tcatcctcctcatcctcctcatcctcctcatc 62992 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62952 tcatcctcctcatcctcctcatcctcctcatc 62983 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||||||||||||||| |||||||| Sbjct: 62943 tcatcctcctcatcctcctcatcctcctcatc 62974 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctc 205 ||||||| ||||||||||||||| ||||| Sbjct: 62997 tcatcctcctcatcctcctcatcctcctc 63025 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 62937 tcctcctcatcctcctcatcctcctcatc 62965 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctc 205 ||||||| ||||||||||||||| ||||| Sbjct: 62835 tcatcctcctcatcctcctcatcctcctc 62863 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 62829 tcctcctcatcctcctcatcctcctcatc 62857 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||| ||||||||||| |||||||| Sbjct: 63015 tcatcctcctcttcctcctcatcctcctcatc 63046 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| |||||||||||| || |||||||| Sbjct: 63006 tcatcctcctcatcctcctcttcctcctcatc 63037 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||| ||||||||||| |||||||| Sbjct: 62925 tcatcctcctcttcctcctcatcctcctcatc 62956 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| |||||||||||| || |||||||| Sbjct: 62898 tcatcctcctcatcctcctcttcctcctcatc 62929
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 315 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 354 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 202 cctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacctc 250 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 175 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 223
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 328 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 367 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 202 cctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacctc 250 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 188 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 236
>emb|X99027.1|HSDRTK9 H.sapiens gene encoding discoidin receptor tyrosine kinase, exon 9 Length = 266 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 136 cctggtggccatcatcctgctcctgctgctcatcat 171
>dbj|AB088102.1| Homo sapiens DDR gene for receptor tyrosine kinase, complete cds Length = 14673 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 5964 cctggtggccatcatcctgctcctgctgctcatcat 5999
>gb|U48705.1|HSU48705 Human receptor tyrosine kinase DDR gene, complete cds Length = 12010 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 5184 cctggtggccatcatcctgctcctgctgctcatcat 5219
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 2979407 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 2979368 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 202 cctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacctc 250 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 2979547 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 2979499 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gaagaagatgtcgatcaagc 110 |||||||||||||||||||| Sbjct: 14327713 gaagaagatgtcgatcaagc 14327694
>gb|AC004211.1|AC004211 Homo sapiens clone UWGC:Y67C112 from 6p21, complete sequence Length = 48731 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 30411 cctggtggccatcatcctgctcctgctgctcatcat 30376
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 36639 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 36678 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 202 cctcatcgtctggctcgtgctccgccccaccagaccgcgcttctacctc 250 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 36499 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 36547
>gb|L57508.1|HUMCAKA Homo sapiens Cak receptor kinase mRNA, complete cds Length = 3692 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1458 cctggtggccatcatcctgctcctgctgctcatcat 1493
>gb|L26525.1|RATPTK3D Rattus norvegicus tyrosine kinase receptor (Ptk-3) gene, complete cds Length = 3743 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 1434 cctggtggccatcatccttctcctcctccttatcat 1469
>gb|L20817.1|HUMCAK Homo sapiens tyrosine protein kinase (CAK) gene, complete cds Length = 3803 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1458 cctggtggccatcatcctgctcctgctgctcatcat 1493
>gb|L11315.1|HUMRTK Homo sapiens receptor tyrosine kinase mRNA, complete cds Length = 3738 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 1407 cctggtggccatcatcctgctcctgctgctcatcat 1442
>dbj|AB023050.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:832F2, complete sequence Length = 112018 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 cctggtggccatcatcctgctcatcctcctcatcat 201 |||||||||||||||||||||| | || |||||||| Sbjct: 23777 cctggtggccatcatcctgctcctgctgctcatcat 23742
>ref|XM_639616.1| Dictyostelium discoideum hypothetical protein (DDB0168049), partial mRNA Length = 753 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 367 tcatcctcctcatcatcctcatc 389 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatc 202 ||||||||| |||||| ||||||||||| Sbjct: 365 catcatcctcctcatcatcctcatcatc 392
>ref|XM_639450.1| Dictyostelium discoideum hypothetical protein (DDB0217339), partial mRNA Length = 753 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 367 tcatcctcctcatcatcctcatc 389 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatc 202 ||||||||| |||||| ||||||||||| Sbjct: 365 catcatcctcctcatcatcctcatcatc 392
>ref|XM_874293.1| PREDICTED: Bos taurus nucleolin, transcript variant 9 (NCL), mRNA Length = 2862 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874208.1| PREDICTED: Bos taurus nucleolin, transcript variant 8 (NCL), mRNA Length = 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874117.1| PREDICTED: Bos taurus nucleolin, transcript variant 7 (NCL), mRNA Length = 2613 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874028.1| PREDICTED: Bos taurus nucleolin, transcript variant 6 (NCL), mRNA Length = 2700 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_873936.1| PREDICTED: Bos taurus nucleolin, transcript variant 5 (NCL), mRNA Length = 2576 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 691 tcatcctcctcatcctcctcctcctcctcatcgtc 657 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 576 gctcatcctcctcttcatcatcatcgtct 548
>ref|XM_873838.1| PREDICTED: Bos taurus nucleolin, transcript variant 4 (NCL), mRNA Length = 2546 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 691 tcatcctcctcatcctcctcctcctcctcatcgtc 657 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 576 gctcatcctcctcttcatcatcatcgtct 548
>ref|XM_873744.1| PREDICTED: Bos taurus nucleolin, transcript variant 3 (NCL), mRNA Length = 2489 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 604 tcatcctcctcatcctcctcctcctcctcatcgtc 570
>ref|XM_873649.1| PREDICTED: Bos taurus nucleolin, transcript variant 2 (NCL), mRNA Length = 2456 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_614626.2| PREDICTED: Bos taurus nucleolin, transcript variant 1 (NCL), mRNA Length = 2694 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctcatcgtct 212 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence Length = 154206 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaaga 95 ||||||||||||||||||||||| Sbjct: 35020 aagaagaaaaaagaggaggaaga 34998
>gb|AY327500.1| Pan troglodytes killer-cell Ig-like receptor mRNA, partial cds Length = 1307 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 170 gtggccatcatcctgctcatcctcctc 196 |||||||||||||| |||||||||||| Sbjct: 978 gtggccatcatcctcctcatcctcctc 1004
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 aagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||||| Sbjct: 76725 aagaaaaaagaggaggaagaaga 76747
>ref|XM_994047.1| PREDICTED: Mus musculus hypothetical protein LOC672514 (LOC672514), mRNA Length = 576 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctc 205 ||||||||| ||| ||||||||||||||||| Sbjct: 469 catcatcctcctcctcctcctcatcatcctc 439
>ref|XM_987857.1| PREDICTED: Mus musculus hypothetical protein LOC667029 (LOC667029), mRNA Length = 768 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctc 205 ||||||||| ||| ||||||||||||||||| Sbjct: 661 catcatcctcctcctcctcctcatcatcctc 631 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatc 202 ||||||| |||||||||||||||||| Sbjct: 518 tcatcctcctcatcctcctcatcatc 493 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 524 tcctcctcatcctcctcatcctcctcatc 496
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||| ||||||||||| Sbjct: 100961 gaagaagaaaaaagaagaggaagaaga 100935
>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence Length = 43815 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 1775 tcatcctcctcatcatcctcatc 1797
>gb|AC116718.21| Mus musculus chromosome 5, clone RP23-203O7, complete sequence Length = 204327 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||| ||||||||||||||||| Sbjct: 130954 gaagaagaagaaagaggaggaagaaga 130928
>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence Length = 198822 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||| ||||||||||||||||||||| Sbjct: 152511 gaagaggaaaaaagaggaggaagaaga 152537
>emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chromosome X Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 166016 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 |||||||||||| |||||||||||||| Sbjct: 46768 gaagaagaaaaaggaggaggaagaaga 46794
>ref|XM_792942.1| PREDICTED: Strongylocentrotus purpuratus similar to Integrin alpha-6 precursor (VLA-6) (CD49f) (LOC593469), mRNA Length = 1260 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctc 205 ||||||||| ||||||||||||||| ||||| Sbjct: 1107 catcatccttctcatcctcctcatcctcctc 1137
>ref|XM_505055.1| Yarrowia lipolytica CLIB122, YALI0F05918g predicted mRNA Length = 1530 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 200 tcatcctcctcatcctcctcatcctcctcttcgtc 166 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 206 tcctcctcatcctcctcatcctcctcatc 178
>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the 5' end of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB) and a CpG island, complete sequence Length = 182914 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 |||||||||| |||||||||||||||| Sbjct: 78886 gaagaagaaagaagaggaggaagaaga 78860
>emb|AL138894.11| Human DNA sequence from clone RP11-28O4 on chromosome 9 Contains the 5' end of the DBCCR1 gene for deleted in bladder cancer chromosome region candidate 1 (IB3089A) and a CpG island, complete sequence Length = 152366 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| ||||| Sbjct: 1093 gaagaagaaaaaagaggaggatgaaga 1119
>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence Length = 150125 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 73 aagaagaaaaaagaggaggaaga 95 ||||||||||||||||||||||| Sbjct: 25254 aagaagaaaaaagaggaggaaga 25276
>gb|AC163355.2| Mus musculus BAC clone RP23-11P15 from chromosome 16, complete sequence Length = 225547 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||| ||||||||||||||||| Sbjct: 67686 gaagaagaagaaagaggaggaagaaga 67660 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gaagaaaaaagaggaggaagaaga 98 |||||| ||||||||||||||||| Sbjct: 67667 gaagaagaaagaggaggaagaaga 67644
>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17 Length = 198176 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 83 aagaggaggaagaagatgtcgat 105 ||||||||||||||||||||||| Sbjct: 163807 aagaggaggaagaagatgtcgat 163785
>emb|AL732607.9| Mouse DNA sequence from clone RP23-16B24 on chromosome 11 Contains a novel pseudogene, two novel genes and a methionine aminopeptidase 2 (Metap2) pseudogene, complete sequence Length = 66800 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||| ||||||||||| Sbjct: 58593 gaagaagaaaaaagaagaggaagaaga 58567
>emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in linkage group 13, complete sequence Length = 213699 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 211551 tcatcctcctcatcatcctcatc 211573
>gb|AC155174.2| Pan troglodytes BAC clone CH251-396C20 from chromosome unknown, complete sequence Length = 185465 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 170 gtggccatcatcctgctcatcctcctc 196 |||||||||||||| |||||||||||| Sbjct: 156715 gtggccatcatcctcctcatcctcctc 156689
>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown, complete sequence Length = 205923 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 170 gtggccatcatcctgctcatcctcctc 196 |||||||||||||| |||||||||||| Sbjct: 172607 gtggccatcatcctcctcatcctcctc 172633
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence Length = 256999 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| ||||| Sbjct: 202081 gaagaagaaaaaagaggaggaggaaga 202107
>ref|NM_063823.2| Caenorhabditis elegans C07E3.2 (C07E3.2) mRNA, complete cds Length = 2307 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 388 tcatcctcctcatcatcctcatc 366
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence Length = 159741 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| ||||| Sbjct: 117363 gaagaagaaaaaagaggaggaggaaga 117337
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatc 208 ||||||||||||||||||||||| Sbjct: 283272 tcatcctcctcatcatcctcatc 283250 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatc 202 ||||||||| |||||| ||||||||||| Sbjct: 283274 catcatcctcctcatcatcctcatcatc 283247
>gb|AC024901.29| Homo sapiens 12 BAC RP11-684M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129638 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| ||||| Sbjct: 94336 gaagaagaaaaaagaggaggaggaaga 94310
>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 Length = 112629 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 83 aagaggaggaagaagatgtcgat 105 ||||||||||||||||||||||| Sbjct: 100715 aagaggaggaagaagatgtcgat 100693
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||| ||||||||||| Sbjct: 151930 gaagaagaaaaaagaagaggaagaaga 151956
>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete sequence Length = 196512 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| ||||| Sbjct: 5484 gaagaagaaaaaagaggaggaggaaga 5458
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 177 tcatcctgctcatcctcctcatcatcctcatcgtc 211 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 875807 tcatcctcctcatcctcctcatcctcctcttcgtc 875773 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gctcatcctcctcatcatcctcatc 208 ||||||||||||||||||| ||||| Sbjct: 2808172 gctcatcctcctcatcatcatcatc 2808196 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 875813 tcctcctcatcctcctcatcctcctcatc 875785
>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence Length = 211774 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 |||||||||||||||||||| |||||| Sbjct: 115704 gaagaagaaaaaagaggagggagaaga 115730
>gb|AC115744.9| Mus musculus chromosome 12, clone RP23-479M19, complete sequence Length = 211776 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 |||||||||| |||||||||||||||| Sbjct: 36941 gaagaagaaagaagaggaggaagaaga 36915
>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete sequence Length = 142174 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaaga 98 ||||||||| ||||||||||||||||| Sbjct: 27083 gaagaagaagaaagaggaggaagaaga 27057
>ref|XM_632862.1| Dictyostelium discoideum hypothetical protein (DDB0218769), partial mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| |||||||| |||||||||||||| Sbjct: 566 catcatcctcttcatcctcttcatcatcctcatc 599
>ref|XM_638940.1| Dictyostelium discoideum hypothetical protein (DDB0167791), partial mRNA Length = 702 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| |||||||| |||||||||||||| Sbjct: 283 catcatcctcatcatcctcatcatcatcctcatc 316
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 42626 catcatcgtcctcatcctcctcatcatcatcatc 42593
>gb|BC085278.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:103199 IMAGE:30438901), complete cds Length = 1258 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 585 tcatcatcctcatcatcctcatcgtc 560
>gb|BT019028.1| Zea mays clone Contig534.F mRNA sequence Length = 1159 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 agaaaaaagaggaggaagaaga 98 |||||||||||||||||||||| Sbjct: 435 agaaaaaagaggaggaagaaga 456
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 |||||||| |||||||||||||||||| ||||| Sbjct: 5290 catcatccccctcatcctcctcatcatcatcatc 5323
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 4803 ctcatcgtctacctcgtgctccgccccacc 4832 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 4936 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 4975
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 1802 ctcatcgtctacctcgtgctccgccccacc 1773
>ref|XM_323994.1| Neurospora crassa OR74A predicted protein (NCU04639.1) partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctca 206 |||||| ||||||| ||||||||||||||| Sbjct: 29 tcatccagctcatcttcctcatcatcctca 58
>ref|NM_008722.1| Mus musculus nucleophosmin 1 (Npm1), mRNA Length = 1260 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 605 tcatcatcctcatcatcctcatcgtc 580
>gb|BC054755.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:64789 IMAGE:6411700), complete cds Length = 1281 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 607 tcatcatcctcatcatcctcatcgtc 582
>ref|XM_954089.1| Neurospora crassa OR74A hypothetical protein (NCU04639.1) partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctca 206 |||||| ||||||| ||||||||||||||| Sbjct: 29 tcatccagctcatcttcctcatcatcctca 58
>ref|XM_958088.1| Neurospora crassa OR74A hypothetical protein (NCU08421.1) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||| ||||||||||| Sbjct: 1234 catcatcctcctcctcctcctcgtcatcctcatc 1201
>ref|XM_329466.1| Neurospora crassa OR74A hypothetical protein (NCU08421.1) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||| ||||||||||| Sbjct: 1234 catcatcctcctcctcctcctcgtcatcctcatc 1201
>ref|XM_705535.1| Candida albicans SC5314 mitochondrial ribosomal large subunit protein MRP51p (CaO19.7816), mRNA Length = 1116 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||||||||| ||||| Sbjct: 512 catcatcctcctcctcctcctcatcatcatcatc 545
>ref|XM_001005436.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC620421), mRNA Length = 1266 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||||||||| ||||| Sbjct: 608 catcatcctcctcctcctcctcatcatcttcatc 575
>gb|AY217131.1| Taeniopygia guttata chromo-helicase DNA-binding protein (CHD1Z) mRNA, complete cds Length = 6951 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||||||||| ||||| Sbjct: 832 catcatcctcctcctcctcctcatcatcatcatc 799
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||||||||||||||| |||||||| Sbjct: 296 tcatcctcctcatcatcatcatcgtc 321
>emb|CR706630.2|CNS0G86Q Tetraodon nigroviridis full-length cDNA Length = 439 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatcgtc 211 |||||||||||| ||||||||||||| Sbjct: 49 tcatcctcctcaacatcctcatcgtc 74
>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence Length = 235814 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 aagaaaaaagaggaggaagaag 97 |||||||||||||||||||||| Sbjct: 92772 aagaaaaaagaggaggaagaag 92793
>gb|AF016672.3| Caenorhabditis elegans cosmid F56D12, complete sequence Length = 44036 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 187 catcctcctcatcatcctcatcgtct 212 ||||||||||||| |||||||||||| Sbjct: 25126 catcctcctcatcttcctcatcgtct 25101
>gb|AY344225.1| Candida glabrata Epa5p (EPA5) and Epa4p (EPA4) genes, complete cds Length = 27514 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 20370 gctcatcctcctcatcatcctc 20391 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 20256 gctcatcctcctcatcatcctc 20277 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 10495 gctcatcctcctcatcatcctc 10474 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 10282 gctcatcctcctcatcatcctc 10261 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctc 205 |||||||||||||||||||| Sbjct: 10379 tcatcctcctcatcatcctc 10360
>gb|BC090842.1| Mus musculus cDNA clone IMAGE:5710461, **** WARNING: chimeric clone **** Length = 2250 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 611 tcatcatcctcatcatcctcatcgtc 586
>emb|AL138881.12| Human DNA sequence from clone RP11-528H16 on chromosome 6 Contains the 5' end of a putative novel gene, complete sequence Length = 38809 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatca 200 ||||||||| |||||||||||||||| Sbjct: 9942 catcatcctcctcatcctcctcatca 9917
>emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2 Length = 37467 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 5921 catcatcgtcctcatcctcctcatcatcatcatc 5888
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 gaaaaaagaggaggaagaagat 99 |||||||||||||||||||||| Sbjct: 184708 gaaaaaagaggaggaagaagat 184687
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 acctggcggtggcgctggcgca 528 |||||||||||||||||||||| Sbjct: 128727 acctggcggtggcgctggcgca 128706
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 acctggcggtggcgctggcgca 528 |||||||||||||||||||||| Sbjct: 201734 acctggcggtggcgctggcgca 201713
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 acctggcggtggcgctggcgca 528 |||||||||||||||||||||| Sbjct: 16330 acctggcggtggcgctggcgca 16309
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4 Length = 313050 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| |||||||| |||||||||||||| Sbjct: 164614 catcatcctcatcatcctcatcatcatcctcatc 164581
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3 Length = 83192 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctca 206 |||||| ||||||| ||||||||||||||| Sbjct: 29997 tcatccagctcatcttcctcatcatcctca 30026
>ref|NM_166984.1| Drosophila melanogaster Mnt CG13316-RC, transcript variant C (Mnt), mRNA Length = 2585 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 2296 catcatcgtcctcatcctcctcatcatcatcatc 2329
>ref|NM_166983.1| Drosophila melanogaster Mnt CG13316-RA, transcript variant A (Mnt), mRNA Length = 2444 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 2155 catcatcgtcctcatcctcctcatcatcatcatc 2188
>ref|NM_130715.2| Drosophila melanogaster Mnt CG13316-RB, transcript variant B (Mnt), mRNA Length = 1828 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 1544 catcatcgtcctcatcctcctcatcatcatcatc 1577
>dbj|AK135517.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820441K12 product:nucleophosmin 1, full insert sequence Length = 1281 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK145124.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830048F21 product:nucleophosmin 1, full insert sequence Length = 1282 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||| ||||||||||||||||| Sbjct: 626 catcatcatcctcatcatcctcatcatcctcatc 593
>dbj|AK153901.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004C03 product:nucleophosmin 1, full insert sequence Length = 1283 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||| ||||||||||||||||| Sbjct: 627 catcatcatcctcatcatcctcatcatcctcatc 594
>gb|AY075354.1| Drosophila melanogaster GH28809 full length cDNA Length = 2350 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 2047 catcatcgtcctcatcctcctcatcatcatcatc 2080
>dbj|AK145813.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0050D07 product:nucleophosmin 1, full insert sequence Length = 1280 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK150164.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530141B10 product:nucleophosmin 1, full insert sequence Length = 697 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>dbj|AK165860.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730008D22 product:nucleophosmin 1, full insert sequence Length = 1276 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 626 tcatcatcctcatcatcctcatcgtc 601
>dbj|AK029681.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930465J06 product:hypothetical protein, full insert sequence Length = 3083 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctca 206 |||||||||||||||||||||| Sbjct: 263 ctcatcctcctcatcatcctca 242
>dbj|AK088923.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430031K14 product:nucleophosmin 1, full insert sequence Length = 1159 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||| ||||||||||||||||| Sbjct: 626 catcatcatcctcatcatcctcatcatcctcatc 593
>gb|AY804072.1| Exodon paradoxus voucher AMNH233426 recombination activating gene 2 (RAG2) gene, partial cds Length = 1211 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcat 207 |||||||||||||||||||||| Sbjct: 1070 tcatcctcctcatcatcctcat 1049
>gb|AY804058.1| Cheirodontops sp. AMNH233215 recombination activating gene 2 (RAG2) gene, partial cds Length = 1222 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcat 207 |||||||||||||||||||||| Sbjct: 1068 tcatcctcctcatcatcctcat 1047
>dbj|AK005498.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600019K04 product:nucleophosmin 1, full insert sequence Length = 966 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>dbj|AK005420.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600012A15 product:nucleophosmin 1, full insert sequence Length = 1157 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK028370.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830425O06 product:nucleophosmin 1, full insert sequence Length = 775 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>ref|NM_001038241.1| Caenorhabditis elegans JNK Interacting Protein (scaffold protein) family member (jip-1) (jip-1) mRNA, complete cds Length = 3080 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 187 catcctcctcatcatcctcatcgtct 212 ||||||||||||| |||||||||||| Sbjct: 1084 catcctcctcatcttcctcatcgtct 1059
>dbj|AK028253.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010003I05 product:nucleophosmin 1, full insert sequence Length = 1280 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 2721995 ctcatcgtctacctcgtgctccgccccacc 2721966 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| Sbjct: 18106538 gaaaaaagaggaggaagaaga 18106518 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 2721862 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 2721823
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 12236094 tcatcatcctcatcatcctcatcgtc 12236119 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 tggtcgccgttcctggtggggtcg 487 |||||||||||||||||| ||||| Sbjct: 7031806 tggtcgccgttcctggtgcggtcg 7031783
>gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, complete sequence Length = 171167 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 gaagaagaaaaaagaggaggaagaag 97 ||||||||| |||||||||||||||| Sbjct: 5419 gaagaagaagaaagaggaggaagaag 5394
>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone BACR12P10, complete sequence Length = 186686 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 150618 gctcatcctcctcatcatcctc 150639
>emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 in linkage group 19, complete sequence Length = 209585 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 aaaaagaggaggaagaagatgt 101 |||||||||||||||||||||| Sbjct: 122584 aaaaagaggaggaagaagatgt 122563
>gb|AC093748.3| Homo sapiens BAC clone RP11-29P18 from 4, complete sequence Length = 112626 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctca 206 ||||||| ||||||||||||||| |||||| Sbjct: 74864 tcatcctcctcatcctcctcatcctcctca 74893 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 74858 tcctcctcatcctcctcatcctcctcatc 74886 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 177 tcatcctgctcatcctcctcatcatcctcatc 208 ||||||| ||| ||||||||||| |||||||| Sbjct: 74846 tcatcctcctcgtcctcctcatcctcctcatc 74877
>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence Length = 166731 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaag 94 |||||||||||||||||||||| Sbjct: 15694 aagaagaaaaaagaggaggaag 15673
>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence Length = 189870 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaag 94 |||||||||||||||||||||| Sbjct: 132267 aagaagaaaaaagaggaggaag 132246
>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence Length = 136240 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| |||||||| |||||||||||||| Sbjct: 80130 catcatcctcatcatcctcatcatcatcctcatc 80163
>gb|BC092378.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:106684 IMAGE:5710278), complete cds Length = 1292 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 589 tcatcatcctcatcatcctcatcgtc 564
>gb|BC090843.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:102162 IMAGE:6820557), complete cds Length = 1160 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 607 tcatcatcctcatcatcctcatcgtc 582
>gb|AF549987.1| Xenopus laevis clone S10-50-C8 mRNA sequence Length = 705 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 |||||||| ||||||||||||||||| Sbjct: 414 tcatcctcgtcatcatcctcatcgtc 389
>gb|AC144715.4| Mus musculus BAC clone RP23-295N8 from chromosome unknown, complete sequence Length = 208503 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||||| ||| |||||||||||||| ||||| Sbjct: 48109 catcatcctcctcctcctcctcatcatcttcatc 48076
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 73116 tcatcatcctcatcatcctcatcgtc 73141
>emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on chromosome 2, complete sequence Length = 194013 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 aagaagaaaaaagaggaggaagaaga 98 |||||||||||||| ||||||||||| Sbjct: 123310 aagaagaaaaaagaagaggaagaaga 123335
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 275 ctcatcgtctacctcgtgctccgccccacc 304 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 408 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 447
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 412 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 451
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 412 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 451
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 412 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 451
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 412 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 451
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 280 ctcatcgtctacctcgtgctccgccccacc 309 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 372 ||||||||||||| |||||||||| |||||| |||||| Sbjct: 413 cccgcaaccccaatgaccgcgtcggcgtctactacgaccg 452
>emb|AL359400.4|CNS05TEW Human chromosome 14 DNA sequence BAC R-114L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175668 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaagaaga 98 ||||||||||| |||||||||||||| Sbjct: 164915 aagaagaaaaaggaggaggaagaaga 164890
>gb|AC117205.3| Mus musculus BAC clone RP23-257K20 from 10, complete sequence Length = 177430 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 gaagaagaaaaaagaggaggaagaag 97 ||||||||| |||||||||||||||| Sbjct: 143921 gaagaagaagaaagaggaggaagaag 143946
>gb|AC151310.2| Xenopus tropicalis clone ISB-151J15, complete sequence Length = 78554 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 cgaagaagaaaaaagaggagga 92 |||||||||||||||||||||| Sbjct: 8296 cgaagaagaaaaaagaggagga 8275
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 442 gggccacctcgacgtctcggtg 463 |||||||||||||||||||||| Sbjct: 31341 gggccacctcgacgtctcggtg 31320
>gb|BC089546.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:107291 IMAGE:30505980), complete cds Length = 1312 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||| ||||||||||||||||| Sbjct: 626 catcatcatcctcatcatcctcatcatcctcatc 593
>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete sequence Length = 247876 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 gctcatcctcctcatcatcctc 205 |||||||||||||||||||||| Sbjct: 208777 gctcatcctcctcatcatcctc 208798
>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete sequence Length = 203546 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | |||||||||||||||||| ||||| Sbjct: 137305 catcatcgtcctcatcctcctcatcatcatcatc 137338
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 203 ctcatcgtctggctcgtgctccgccccacc 232 |||||||||| |||||||||||||||||| Sbjct: 2731026 ctcatcgtctacctcgtgctccgccccacc 2730997 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| Sbjct: 18197792 gaaaaaagaggaggaagaaga 18197772
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 agaagaaaaaagaggaggaaga 95 |||||||||||||||||||||| Sbjct: 34164 agaagaaaaaagaggaggaaga 34143
>gb|AC140213.2| Mus musculus BAC clone RP23-270L5 from 7, complete sequence Length = 195922 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaagaaga 98 ||||||||||| |||||||||||||| Sbjct: 95042 aagaagaaaaaggaggaggaagaaga 95017
>gb|BC110946.1| Xenopus laevis cDNA clone MGC:132157 IMAGE:5078721, complete cds Length = 1721 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 |||||||| ||||||||||||||||| Sbjct: 793 tcatcctcgtcatcatcctcatcgtc 768
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 gaacagcaggagcacgaagaag 78 |||||||||||||||||||||| Sbjct: 1182304 gaacagcaggagcacgaagaag 1182325
>emb|AL355112.4|CNS05TCB Human chromosome 14 DNA sequence BAC R-159D23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 147454 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 aagaagaaaaaagaggaggaagaaga 98 ||||||||||| |||||||||||||| Sbjct: 5938 aagaagaaaaaggaggaggaagaaga 5913
>gb|AC154735.2| Mus musculus BAC clone RP24-383B6 from chromosome 16, complete sequence Length = 224440 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 aagaagaaaaaagaggaggaagaaga 98 ||||||||||||||||| |||||||| Sbjct: 51954 aagaagaaaaaagaggaagaagaaga 51979
>gb|M33212.1|MUSN038A Mouse nucleolar protein N038 mRNA, complete cds Length = 1260 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tcatcctcctcatcatcctcatcgtc 211 ||||| |||||||||||||||||||| Sbjct: 605 tcatcatcctcatcatcctcatcgtc 580
>gb|J00513.1|MUSIGHVM2 Mouse Ig germline H-chain V-region pseudogene VH111, VH-II Length = 1616 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 175 catcatcctgctcatcctcctcatcatcctcatc 208 ||||||| | ||||||||| |||||||||||||| Sbjct: 194 catcatcatcctcatcctcatcatcatcctcatc 227
>gb|BC035312.1| Homo sapiens chromosome Y open reading frame 15B, mRNA (cDNA clone MGC:21662 IMAGE:4747440), complete cds Length = 1133 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 agaaaaaagaggaggaagaag 97 ||||||||||||||||||||| Sbjct: 328 agaaaaaagaggaggaagaag 348
>ref|XM_479791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 tgctcatcctcctcatcatcctcatcgtc 211 ||||| ||||||||||| ||||||||||| Sbjct: 343 tgctcctcctcctcatcctcctcatcgtc 315
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 gctccccgtggtgtaccagggccac 448 ||||||||||| ||||||||||||| Sbjct: 339 gctccccgtggagtaccagggccac 363
>ref|XM_474419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 ccgcaaccccaacacccgcgtcggcatctacttcgac 370 |||||||||||||| ||||||||| |||||| |||| Sbjct: 249 ccgcaaccccaacaagcgcgtcggcctctactacgac 285
>ref|XM_463934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2784 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 catcctgctcatcctcctcatcatc 202 ||||||| ||||||||||||||||| Sbjct: 679 catcctggtcatcctcctcatcatc 655
>ref|XM_471358.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gaagaagatgtcgatcaagca 111 ||||||||||||||||||||| Sbjct: 2149 gaagaagatgtcgatcaagca 2169
>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence Length = 202993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 atcctgctcatcctcctcatc 199 ||||||||||||||||||||| Sbjct: 65334 atcctgctcatcctcctcatc 65354
>gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, complete sequence Length = 187390 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 139628 tccttctcatcctcctcatcttcctcatc 139656
>gb|AC102327.8| Mus musculus chromosome 15, clone RP24-502J3, complete sequence Length = 188266 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcctgctcatcctcctcatcatcctcatc 208 |||| ||||||||||||||| |||||||| Sbjct: 132201 tccttctcatcctcctcatcttcctcatc 132173
>gb|AC084153.1| Caenorhabditis elegans cosmid Y22D7AL, complete sequence Length = 89370 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| Sbjct: 368 gaaaaaagaggaggaagaaga 388
>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0001I22, complete sequence Length = 162413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| Sbjct: 33049 gaaaaaagaggaggaagaaga 33029
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aaaaagaggaggaagaagatg 100 ||||||||||||||||||||| Sbjct: 175095 aaaaagaggaggaagaagatg 175115
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gaaaaaagaggaggaagaaga 98 ||||||||||||||||||||| Sbjct: 89599 gaaaaaagaggaggaagaaga 89579
>gb|AC009744.8| Drosophila melanogaster clone BACR06G16, complete sequence Length = 179038 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 tcctgctcatcctcctcatcatcct 204 |||| |||||||||||||||||||| Sbjct: 81684 tcctcctcatcctcctcatcatcct 81708
>ref|XM_867064.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 2 (LOC534092), mRNA Length = 3670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 1344 cctggtggccatcatcctgct 1364
>ref|XM_879535.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 7 (LOC534092), mRNA Length = 3006 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>ref|XM_879506.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 6 (LOC534092), mRNA Length = 2895 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>ref|XM_613735.2| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 1 (LOC534092), mRNA Length = 2814 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>ref|XM_879444.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 5 (LOC534092), mRNA Length = 2973 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>ref|XM_879418.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 4 (LOC534092), mRNA Length = 2000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>ref|XM_879393.1| PREDICTED: Bos taurus similar to Epithelial discoidin domain receptor 1 precursor (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen) (HGK2)..., transcript variant 3 (LOC534092), mRNA Length = 1611 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 680 cctggtggccatcatcctgct 700
>gb|BC070795.1| Xenopus laevis hypothetical protein MGC83846, mRNA (cDNA clone MGC:83846 IMAGE:6643537), complete cds Length = 3065 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 174 ccatcatcctgctcatcctcctcatcatc 202 |||||||||| ||| |||||||||||||| Sbjct: 2001 ccatcatcctcctcctcctcctcatcatc 1973
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 atcctgctcatcctcctcatc 199 ||||||||||||||||||||| Sbjct: 2721131 atcctgctcatcctcctcatc 2721151
>gb|AY640621.1| Mus musculus DARPP-30b (Ppp1r1b) mRNA, complete cds, alternatively spliced Length = 1836 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 852 ctcatcctcctcatcatcctc 832
>gb|AY640620.1| Mus musculus DARPP-30a (Ppp1r1b) mRNA, complete cds, alternatively spliced Length = 1356 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 394 ctcatcctcctcatcatcctc 374
>ref|NM_144828.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B (Ppp1r1b), mRNA Length = 1682 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 716 ctcatcctcctcatcatcctc 696
>gb|BC051644.1| Mus musculus tumor rejection antigen P1A, mRNA (cDNA clone MGC:60563 IMAGE:30022193), complete cds Length = 986 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcctcatcatcctcatcgtct 212 ||||||||||||||||||||| Sbjct: 342 tcctcatcatcctcatcgtct 322
>gb|BC031129.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B, mRNA (cDNA clone MGC:36569 IMAGE:4988284), complete cds Length = 1441 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 464 ctcatcctcctcatcatcctc 444
>gb|BC052036.1| Mus musculus RIKEN cDNA 9130023F12 gene, mRNA (cDNA clone MGC:62395 IMAGE:5702534), complete cds Length = 3912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 292 ctcatcctcctcatcatcctc 272
>gb|BC026568.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B, mRNA (cDNA clone MGC:36370 IMAGE:4982294), complete cds Length = 1682 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ctcatcctcctcatcatcctc 205 ||||||||||||||||||||| Sbjct: 716 ctcatcctcctcatcatcctc 696
>ref|NM_007584.1| Mus musculus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 3674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cctggtggccatcatcctgct 186 ||||||||||||||||||||| Sbjct: 1366 cctggtggccatcatcctgct 1386
>ref|XM_705521.1| Candida albicans SC5314 mitochondrial ribosomal large subunit protein MRP51p (CaO19.185), mRNA Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 176 atcatcctgctcatcctcctcatcatcctcatc 208 |||||||| ||| |||||||||||||| ||||| Sbjct: 510 atcatcctcctcctcctcctcatcatcatcatc 542
>ref|NM_011635.1| Mus musculus tumor rejection antigen P1A (Trap1a), mRNA Length = 1174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcctcatcatcctcatcgtct 212 ||||||||||||||||||||| Sbjct: 549 tcctcatcatcctcatcgtct 529 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,577,904 Number of Sequences: 3902068 Number of extensions: 4577904 Number of successful extensions: 167840 Number of sequences better than 10.0: 718 Number of HSP's better than 10.0 without gapping: 722 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 161524 Number of HSP's gapped (non-prelim): 6241 length of query: 567 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 544 effective length of database: 17,143,297,704 effective search space: 9325953950976 effective search space used: 9325953950976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
