ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b01 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 79.3 bits (194), Expect = 7e-15 Identities = 49/159 (30%), Positives = 73/159 (45%) Frame = +3 Query: 75 TDAELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQ 254 TD LL AQ +LW + ++ SM L+ AI L I AIH GG SL +++ + L S+ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 255 PFLGRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVL 434 L RLMRVL T+ VF +++L P+SR+L+ +QT Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIG---SQSSQLAQTPLAA 125 Query: 435 AATSPFYTEAALGLADWFRKDVTGPAVPSPFEDVHGASL 551 P L WF+ ++ P + F+ HG + Sbjct: 126 MVLDPTIVSPFSELGAWFQHELPDPCI---FKHTHGRGI 161
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 66.2 bits (160), Expect = 6e-11 Identities = 42/138 (30%), Positives = 63/138 (45%) Frame = +3 Query: 84 ELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFL 263 +LLQAQA +W H + SM L+CAI+LGIP +H+ +L L+ A+ + K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 264 GRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAAT 443 RLMR LV S F + L P SR+L+ G + V Sbjct: 74 QRLMRALVNSNFF-----IEENSNNQEVCYWLTPASRLLLKGA-----PLTVAPLVQVVL 123 Query: 444 SPFYTEAALGLADWFRKD 497 P +T +++WF+ + Sbjct: 124 DPTFTNPWHYMSEWFKHE 141
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 62.0 bits (149), Expect = 1e-09 Identities = 40/135 (29%), Positives = 61/135 (45%) Frame = +3 Query: 84 ELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFL 263 +LLQAQ +W H + SM L+CAI+LGIP +H+ G +L L+ ++ + K Sbjct: 14 QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCF 73 Query: 264 GRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAAT 443 RLMR LV S F + L P S +L+ + + T V Sbjct: 74 QRLMRALVNSNFF----IEENNSNNQEVCYWLTPASCLLL-----KEAPLTVTPLVQVVL 124 Query: 444 SPFYTEAALGLADWF 488 P +T +++WF Sbjct: 125 DPTFTNPWHHMSEWF 139
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = +3 Query: 81 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPF 260 +E+ +AQA L++H ++ SM L+ A+ + IP IH G SL +L++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 261 LGRLMRVLVTSGVF 302 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 53.1 bits (126), Expect = 5e-07 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = +3 Query: 81 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPF 260 +E+ +AQA L++H ++ SM L+ A+++ IP I G SL +L++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 261 LGRLMRVLVTSGVF 302 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 53.1 bits (126), Expect = 5e-07 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = +3 Query: 81 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPF 260 +E+ +AQA L++H ++ SM L+ A+++ IP I G SL +L++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 261 LGRLMRVLVTSGVF 302 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 48.1 bits (113), Expect = 2e-05 Identities = 35/120 (29%), Positives = 52/120 (43%) Frame = +3 Query: 90 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGR 269 ++AQA +W+H + ++ LR + LGIP IH G VT L L+ L L ++ Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNGPVT-LSQLVTHLPLKSTSIDRFHH 71 Query: 270 LMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAATSP 449 MR LV +F + L P S++LV H S +V+ T P Sbjct: 72 FMRYLVHMQLFTISTDQITKEDK----YELTPASKLLV-----HGHQKSLAPYVMLQTHP 122
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = +3 Query: 90 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGR 269 L +QA LW + S+ L+CA++L + IH G +L +L + L + L R Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 270 LMRVLVTSGVF 302 +MR LV +F Sbjct: 68 VMRYLVHMKLF 78
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 38.5 bits (88), Expect = 0.013 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = -3 Query: 550 SDAPCTSSNGDGTAGPVTSFLNQSAS-PSAASV*KGDVAASTKDVWLWCSSWPTTPSTRM 374 S AP TSS + ++ PVTS +S+S P +S + A T S+ TPS+ Sbjct: 406 SSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 465 Query: 373 RDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRI 272 +S +S ++ S P+P P++ T + +S + Sbjct: 466 TESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPV 500 Score = 37.7 bits (86), Expect = 0.022 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 8/137 (5%) Frame = -3 Query: 550 SDAPCTSSNGDGTAGPVTSFLNQSAS-----PSAASV*KGDVAAST-KDVWLWCSSWPT- 392 S AP TSS + ++ PVTS +S+S PS+++ T SS P Sbjct: 679 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVP 738 Query: 391 TPSTRMRDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKS 215 TPS+ +S +S ++ S P+P P++ T + +S + P + S SA + + Sbjct: 739 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS--TTESSSAPVPT 796 Query: 214 GSEVTPPRRWMAVGMPS 164 S T V PS Sbjct: 797 PSSSTTESSVAPVPTPS 813 Score = 36.6 bits (83), Expect = 0.049 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Frame = -3 Query: 550 SDAPCTSSNGDGTAGPVTSFLNQSAS---PSAASV*KGDVAASTKDVWLWCSSWPT-TPS 383 S AP TSS + ++ PVTS +S+S P+ +S +A SS P TPS Sbjct: 430 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPS 489 Query: 382 TRMRDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGS 209 + +S +S ++ S P+P P++ T + +S P + S SA + S + Sbjct: 490 SSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSS--TTESSSAPVTSST 546 Score = 32.7 bits (73), Expect = 0.70 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 3/117 (2%) Frame = -3 Query: 550 SDAPCTSSNGDGTAGPVTSFLNQSAS---PSAASV*KGDVAASTKDVWLWCSSWPTTPST 380 S AP TSS + ++ PVTS +S+S P+ +S +A SS P T ST Sbjct: 367 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSST 426 Query: 379 RMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGS 209 S +S +S P + T + +S + P + S SA + S + Sbjct: 427 TESSSA----PVTSSTTESSSAPVTSSTTESSSAPVPTPSSS--TTESSSAPVTSST 477
>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3| Length = 944 Score = 36.2 bits (82), Expect = 0.063 Identities = 29/92 (31%), Positives = 47/92 (51%) Frame = -3 Query: 550 SDAPCTSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMR 371 +++P + + ++ +T L +A+P+A S AST + + S+ P P+TR+ Sbjct: 793 AESPRPARSSPASSPELTPALEATAAPAAPS------GASTTRMQIGSSTEP--PTTRLA 844 Query: 370 DSGLRLKSSPASDPDSEPLPPAAKTPDVTSTR 275 +G R SPAS P P PP+A P TR Sbjct: 845 AAG-RSVQSPASTPPPTPTPPSA--PSAGQTR 873
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 36.2 bits (82), Expect = 0.063 Identities = 22/66 (33%), Positives = 35/66 (53%) Frame = +3 Query: 90 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGR 269 ++AQA +W+ + S+ LRCA++LGI I +L DL + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 270 LMRVLV 287 ++R LV Sbjct: 72 ILRYLV 77
>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)| Length = 1186 Score = 35.4 bits (80), Expect = 0.11 Identities = 31/116 (26%), Positives = 46/116 (39%) Frame = -3 Query: 547 DAPCTSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRD 368 D TS++G T+G AS S+AS K D A+S W W + R Sbjct: 1044 DGSVTSTDGSSTSG--------GASSSSASTAKSDAASSEDGFWWW--------NRRKSG 1087 Query: 367 SGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVT 200 SG + + +S D A+ T +ST +G S S++ GS + Sbjct: 1088 SGHKSATVQSSTTDKTSTDSASSTDSTSST------SGASTTTSGSSSTSGGSSTS 1137
>CDX2_MOUSE (P43241) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 311 Score = 33.1 bits (74), Expect = 0.54 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +2 Query: 59 DHGGPHGCRAAAGTGG---PVAPQPLLPHVHGAPLRHQAXXXXXXXXXXXXXLAAGLDGR 229 D+GG H AAA T +P P P +GAPLR +A GL+G Sbjct: 39 DYGGYHVAAAAAATANLDSAQSPGPSWPTAYGAPLREDWNGYAPGGAAAANAVAHGLNGG 98 Query: 230 AVAS 241 + A+ Sbjct: 99 SPAA 102
>IRX1_HUMAN (P78414) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 397 PTTPSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRP 263 P PS RD G L ++ P PL A + P+ STR+ P Sbjct: 255 PAAPSALARDQGSPLAAADVLKPQDSPLGLAKEAPEPGSTRLLSP 299
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 32.0 bits (71), Expect = 1.2 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 4/113 (3%) Frame = -3 Query: 535 TSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLR 356 T S D +A TS + S S + +S G AAS+ SS P++ + S Sbjct: 423 TGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA 482 Query: 355 LKSSPASDPDSEPLP----PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGS 209 SSP+S S P ++ P +++ P + A S SA+ S S Sbjct: 483 ASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSS---ASSSSASSSSAS 532
>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)| Length = 1980 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -3 Query: 328 DSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEV 203 DS+PL PD R+ RPR G L + KS EV Sbjct: 311 DSDPLSRGDHPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEV 352
>CSD_MYCPA (Q9KII6) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 685 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = -3 Query: 481 SASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDS--GLRLKSSPASDPDSEPLPP 308 SA + A+ G AA T DV+ SSW P + D G + P + P S P P Sbjct: 124 SAPDATAATSAGRAAAGTSDVY---SSW--VPQLGVADIYLGAPTPAGPEAPPQSAPPAP 178 Query: 307 AAKTPDVTS 281 + PD T+ Sbjct: 179 RGQVPDTTA 187
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 10/78 (12%) Frame = -3 Query: 346 SPASDPDSEPLPPAAK---TPDVTSTRIRRPRNGCLLAGSDSAAIKSGSE-------VTP 197 SP S P P PPAAK TP + ++P++ + S S E TP Sbjct: 395 SPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTP 454 Query: 196 PRRWMAVGMPSLMAQRSP 143 R A PSL A+++P Sbjct: 455 KARVTAKAAPSLPAKQAP 472
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = -3 Query: 499 TSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSE 320 TS + + S S ++ ST + +S T+ ++ + S + SSP+S S Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359 Query: 319 PLPPAAKTPDVTSTRIRRPRN 257 +P TP++TST P N Sbjct: 360 SIPTTT-TPEITSTLSSLPDN 379
>MYC_FLVTT (P21438) Viral myc transforming protein (v-Myc)| Length = 437 Score = 30.4 bits (67), Expect = 3.5 Identities = 29/99 (29%), Positives = 41/99 (41%) Frame = -3 Query: 490 LNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSEPLP 311 LN S+SP + D AA + SS ++P + GL ++ P + DSE Sbjct: 199 LNDSSSPKPCA--SPDSAAFSPSSDSLLSSAESSPRASPKPLGLHEETPPTTSSDSEEEQ 256 Query: 310 PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTPP 194 + DV S R+P +GS SA G PP Sbjct: 257 EEEEEIDVVSVEKRQPPAKRSESGSPSA----GGHSKPP 291
>GLYA_STRA5 (Q8DZM7) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>GLYA_STRA3 (Q8E5C6) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>GLYA_STRA1 (Q3K122) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>DNAJ_NEIMB (P63969) Chaperone protein dnaJ| Length = 373 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 117 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGRLMRV 281 H ++ + L C + + TA LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHCELPISFATAA--LGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>DNAJ_NEIMA (P63968) Chaperone protein dnaJ| Length = 373 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 117 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGRLMRV 281 H ++ + L C + + TA LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHCELPISFATAA--LGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>PKNE_MYCTU (P72001) Serine/threonine-protein kinase pknE (EC 2.7.11.1)| Length = 566 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 159 WRSGAPWT*GSRGCGATGPPVPAAARHPW 73 W PW G+ G P+P +AR PW Sbjct: 309 WPQPTPWAGGAPPWGPPSSPLPRSARQPW 337
>PKNE_MYCBO (Q7TZN3) Serine/threonine-protein kinase pknE (EC 2.7.11.1)| Length = 566 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 159 WRSGAPWT*GSRGCGATGPPVPAAARHPW 73 W PW G+ G P+P +AR PW Sbjct: 309 WPQPTPWAGGAPPWGPPSSPLPRSARQPW 337
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -2 Query: 299 DTRRDQHTH*AAEEWLLARRKRQRGHQV-RQRGDPAEAVDGRRDAELDGAAEPHGREV 129 + +R + AE +R+RQRG + RQRG AE G R+AE GREV Sbjct: 100 ERQRGREAEREAERQRERQRERQRGREAERQRGREAERQRG-REAEKQRGERQRGREV 156
>SIC1_YEAST (P38634) Protein SIC1 (CDK inhibitor p40)| Length = 284 Score = 30.4 bits (67), Expect = 3.5 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = -3 Query: 391 TPSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSG 212 TPST R G R + P+ + S L KTP S +N + S + + K+ Sbjct: 2 TPSTPPRSRGTRYLAQPSGNTSSSALMQGQKTPQKPS------QNLVPVTPSTTKSFKNA 55 Query: 211 SEVTPPRRWMAVGMP---SLMAQRSP 143 + PP M + P QRSP Sbjct: 56 PLLAPPNSNMGMTSPFNGLTSPQRSP 81
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.0 bits (66), Expect = 4.5 Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 10/100 (10%) Frame = -3 Query: 406 SSWPTTPSTRMRDSGLRLKSSPAS--DPDSEPLPPAAKTPDVT-----STRIRRPRNGCL 248 S WP+ PS +RD +L++S S E LP PD T S R+ P + Sbjct: 29 SHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFRVTIPTD--- 85 Query: 247 LAGSDSAAIK---SGSEVTPPRRWMAVGMPSLMAQRSPMD 137 L GS IK +G EV P W+ S + P+D Sbjct: 86 LIGSSGEVIKVSTAGKEVLP--SWLHWDPQSHTLEGLPLD 123
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSE 206 A DPD PL PD R+ RPR G L + KS E Sbjct: 304 AEDPD--PLSRGDHPPDKRPVRLNRPRGGTLFGRTIQEVFKSNKE 346
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 429 VLAATSPFYTEAALGLADWFRKDVTGPAVPSP 524 VLAA+SPF+ EA L A TG A P+P Sbjct: 47 VLAASSPFFREALLTSAPLPLPPATGGAAPNP 78
>LRC21_MOUSE (Q8K099) Leucine-rich repeat-containing protein 21 precursor| (Photoreceptor-associated LRR superfamily protein) (Retina-specific protein PAL) Length = 618 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 418 WLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRR 266 W +C S + S R+ G + ++ SDPD LPPA+ PD R+ R Sbjct: 14 WGFCPS-ECSCSLRILSDGSKARTVVCSDPDLT-LPPASIPPDTCKLRLER 62
>GLYA_STRT2 (Q5M4W1) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 AS P+P A T T +R PR G +L + A K S V P Sbjct: 210 ASGHHPSPVPYAHVTTTTTHKTLRGPRGGLILTDDEDIAKKLNSAVFP 257
>GLYA_STRT1 (Q5M0B4) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 340 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 AS P+P A T T +R PR G +L + A K S V P Sbjct: 210 ASGHHPSPVPYAHVTTTTTHKTLRGPRGGLILTDDEDIAKKLNSAVFP 257
>DNAJ_NEIG1 (Q5F5M1) Chaperone protein dnaJ| Length = 373 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +3 Query: 117 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPDLMAALSLPASKQPFLGRLMRV 281 H ++ + L C +L I A+ LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHC--ELPISFAMAALGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>GLYA_BRAJA (P24060) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 432 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 325 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 + P+P A T T +R PR G +L+ ++ A K S + P Sbjct: 225 ASPVPYAHVTTTTTHKSLRGPRGGLILSNDETLAKKLNSAIFP 267
>GLYA1_RHOPA (Q6N693) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine| methylase 1) (SHMT 1) Length = 432 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -3 Query: 325 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 + P+P A T T +R PR G +L ++ A K S + P Sbjct: 225 ASPVPHAHVTTTTTHKSLRGPRGGLILTNDEALAKKFNSAIFP 267
>CCNE_DROME (P54733) G1/S-specific cyclin-E (DmCycE)| Length = 709 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = -3 Query: 505 PVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPD 326 P+ S SAS + G AAS D C S ST +G + K +SD + Sbjct: 59 PIPSTSFSSASQRSEEELPGTSAASRTDEMCSCDSQNLAASTAATSNGNKRKRRLSSDSN 118 Query: 325 SEP----LPPAAK 299 +P PP+AK Sbjct: 119 EDPELGFEPPSAK 131
>GLYA_NITWN (Q3SRV3) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 433 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -3 Query: 325 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKSGSEVTP 197 + P+P A T T +R PR G +L ++ A K S + P Sbjct: 226 ASPVPHAHVTTTTTHKSLRGPRGGLILCNDEALAKKFNSAIFP 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,976,208 Number of Sequences: 219361 Number of extensions: 1209137 Number of successful extensions: 6360 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 5704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6339 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
