ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108532.1| Zea mays PCO147609 mRNA sequence Length = 1032 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 67 catggcagaagcggccgtcggcgagcctcgcctccccgaggagatcgtcacctgggagat 126 ||||||||||||||||| ||||| || | ||||||||||| || | | ||||||||| Sbjct: 73 catggcagaagcggccggcggcggacccctgctccccgaggaactcattatctgggagat 132 Query: 127 tctcatccgcctgccgccgaaggtcctcatccggtgccgcgccgtctgccgctcctggca 186 || | ||| |||||| ||||| |||| |||| |||||||| ||||||| ||||||| Sbjct: 133 cctaacccgtctgccggcgaagcccctcctccgatgccgcgctgtctgcctctcctggtg 192 Query: 187 ccgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgct 246 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 193 ccgccgactcacctccgacgccaaattcctcctcgcccaccaccgtcgccagccctcgct 252 Query: 247 cccgctcgtcac 258 ||||||| |||| Sbjct: 253 cccgctcctcac 264 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 363 acgtgctcgccttctgcgacggcctccttatcatcgtcgcctacggcggcctctacatct 422 ||||||| || | ||||||||||||||| ||| || ||||| ||||||||||| | |||| Sbjct: 381 acgtgctggcttcctgcgacggcctcctcatcctcctcgccaacggcggcctccagatct 440 Query: 423 gcaacccggcgactcgccagcacgcgcccctcccgcttcttcacg 467 ||||||||||||| ||||||| |||||| ||| | ||||| |||| Sbjct: 441 gcaacccggcgacccgccagcgcgcgccgctcgcccttctccacg 485 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 275 gagagaaggatcgacgtcctggaccacagcaccggcgagcggcgccccgtcgcgcgga 332 ||||| |||||||||| ||||||| || |||||||||||||||||||| ||||||||| Sbjct: 287 gagaggaggatcgacgccctggactaccgcaccggcgagcggcgccccatcgcgcgga 344
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 6223009 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 6222950 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 6222949 cccctcgtcacc 6222938 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctccc 249 |||||||||||||||||||||| ||||||||| ||||| Sbjct: 6228655 ttcctcctcgcccaccaccgccaccagccctccctccc 6228618 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| |||||| ||| |||||||||| Sbjct: 6486884 ttcctcctcgcccaccaccgccaccagccgccgcgcccgctcgtc 6486840 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 6420693 ttcctcctcgcccaccaccgccatcaaccctccctcccgctcgtc 6420649 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||||| | ||||| |||||| Sbjct: 6353536 ttcctcctcacccaccaccgccaccagcccaccctccccctcgtc 6353492 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 414 tctacatctgcaacccggcgactcgccag 442 ||||||||||||||||||| || |||||| Sbjct: 6486652 tctacatctgcaacccggccacgcgccag 6486624
>dbj|AK069445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020G11, full insert sequence Length = 2307 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 166 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 225 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 226 cccctcgtcacc 237
>dbj|AK068576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157C02, full insert sequence Length = 1098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 183 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 242 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 243 cccctcgtcacc 254
>dbj|AK068352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146A02, full insert sequence Length = 1603 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 177 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 236 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 237 cccctcgtcacc 248
>dbj|AK065570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N16, full insert sequence Length = 2009 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 166 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 225 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 226 cccctcgtcacc 237
>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20, complete sequence Length = 147108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 118794 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 118735 Query: 248 ccgctcgtcacc 259 || ||||||||| Sbjct: 118734 cccctcgtcacc 118723 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctccc 249 |||||||||||||||||||||| ||||||||| ||||| Sbjct: 124440 ttcctcctcgcccaccaccgccaccagccctccctccc 124403
>ref|XM_474752.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1203 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctccc 249 |||||||||||||||||||||| ||||||||| ||||| Sbjct: 163 ttcctcctcgcccaccaccgccaccagccctccctccc 200
>dbj|AK067184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096D22, full insert sequence Length = 1475 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctccc 249 |||||||||||||||||||||| ||||||||| ||||| Sbjct: 247 ttcctcctcgcccaccaccgccaccagccctccctccc 284
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagccctcgctc 247 ||||||||||||||| | | | |||||||||||||||||||||| ||||||||| ||| Sbjct: 990 cgccgcctcacctccacccgcgacttcctcctcgcccaccaccgccaccagccctccctc 931 Query: 248 cc 249 || Sbjct: 930 cc 929
>ref|XM_474780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| |||||| ||| |||||||||| Sbjct: 154 ttcctcctcgcccaccaccgccaccagccgccgcgcccgctcgtc 198 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 tctacatctgcaacccggcgactcgccag 442 ||||||||||||||||||| || |||||| Sbjct: 386 tctacatctgcaacccggccacgcgccag 414
>ref|XM_474775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 151 ttcctcctcgcccaccaccgccatcaaccctccctcccgctcgtc 195
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| |||||| ||| |||||||||| Sbjct: 41132 ttcctcctcgcccaccaccgccaccagccgccgcgcccgctcgtc 41088 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 414 tctacatctgcaacccggcgactcgccag 442 ||||||||||||||||||| || |||||| Sbjct: 40900 tctacatctgcaacccggccacgcgccag 40872
>dbj|AK107201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-B03, full insert sequence Length = 1628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| |||||| ||| |||||||||| Sbjct: 229 ttcctcctcgcccaccaccgccaccagccgccgcgcccgctcgtc 273 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 tctacatctgcaacccggcgactcgccag 442 ||||||||||||||||||| || |||||| Sbjct: 461 tctacatctgcaacccggccacgcgccag 489
>dbj|AK102654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101G08, full insert sequence Length = 1346 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 193 ttcctcctcgcccaccaccgccatcaaccctccctcccgctcgtc 237
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 |||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 82842 ttcctcctcgcccaccaccgccatcaaccctccctcccgctcgtc 82798 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||||| | ||||| |||||| Sbjct: 15685 ttcctcctcacccaccaccgccaccagcccaccctccccctcgtc 15641
>ref|XM_474766.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||||| | ||||| |||||| Sbjct: 310 ttcctcctcacccaccaccgccaccagcccaccctccccctcgtc 354
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 61448 ttcctcctcacccaccaccgccaccagctgtcgcacccgctcgtc 61492
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| ||||||||||||||||||| Sbjct: 1341997 ttcctcctcacccaccaccgccgccagcc 1342025 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 24988112 ccgcgccgtctgccgctcctggc 24988134 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 24394047 ccgcgccgtctgccgctcctggc 24394025 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcac 187 |||||||||||||||||||||| Sbjct: 25724704 cgccgtctgccgctcctggcac 25724683 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 gccgcgccgtctgccgctcctggc 185 ||||||||||| |||||||||||| Sbjct: 10642764 gccgcgccgtcggccgctcctggc 10642741 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctcgctcccgctcgtcacca 260 |||||||||||||||||||| Sbjct: 4162795 ctcgctcccgctcgtcacca 4162814
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2560956 ttcctcctcacccaccaccgccaccagctgtcgcacccgctcgtc 2560912 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcctcctcgcccaccaccgccgcc 236 ||||||||||||| |||||||||| Sbjct: 22006859 tcctcctcgcccatcaccgccgcc 22006836
>dbj|AK107044.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C07, full insert sequence Length = 1718 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||||| | ||||| |||||| Sbjct: 256 ttcctcctcacccaccaccgccaccagcccaccctccccctcgtc 300
>dbj|AK103867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149H01, full insert sequence Length = 1718 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| ||||||||||||||||||| Sbjct: 459 ttcctcctcacccaccaccgccgccagcc 487
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagccctcgctcccgctcgtc 256 ||||||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2569987 ttcctcctcacccaccaccgccaccagctgtcgcacccgctcgtc 2569943 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcctcctcgcccaccaccgccgcc 236 ||||||||||||| |||||||||| Sbjct: 22316770 tcctcctcgcccatcaccgccgcc 22316747
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| ||||||||||||||||||| Sbjct: 1341997 ttcctcctcacccaccaccgccgccagcc 1342025 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 24916318 ccgcgccgtctgccgctcctggc 24916340 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 24322253 ccgcgccgtctgccgctcctggc 24322231 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcac 187 |||||||||||||||||||||| Sbjct: 25652880 cgccgtctgccgctcctggcac 25652859 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 gccgcgccgtctgccgctcctggc 185 ||||||||||| |||||||||||| Sbjct: 10642463 gccgcgccgtcggccgctcctggc 10642440 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctcgctcccgctcgtcacca 260 |||||||||||||||||||| Sbjct: 4162782 ctcgctcccgctcgtcacca 4162801
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| ||||||||||||||||||| Sbjct: 87172 ttcctcctcacccaccaccgccgccagcc 87144
>ref|XM_482821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1092 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 172 ttcctcctcgcccaccaccgccaccagc 199
>ref|NM_196292.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0061I18.2), mRNA Length = 1479 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||| | ||||||| ||||||||||| |||||||| Sbjct: 520 cgccgcctcacctccgacccggccttcctccgcgcccaccaccaccgccagc 571
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||| | ||||||| ||||||||||| |||||||| Sbjct: 3344 cgccgcctcacctccgacccggccttcctccgcgcccaccaccaccgccagc 3395
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||| | ||||||| ||||||||||| |||||||| Sbjct: 22256 cgccgcctcacctccgacccggccttcctccgcgcccaccaccaccgccagc 22205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||| | ||||||| ||||||||||| |||||||| Sbjct: 12500831 cgccgcctcacctccgacccggccttcctccgcgcccaccaccaccgccagc 12500780 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 1536225 ttcctcctccgccaccaccgccgccagcc 1536253 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcaccg 189 |||||||| ||||||||||||||| Sbjct: 5134330 cgccgtctcccgctcctggcaccg 5134307
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 14475335 ttcctcctcgcccaccaccgccaccagc 14475308
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 22754056 ttcctcctcgcccaccaccgccaccagc 22754083 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 26117966 cgccgtctgccgctcctggc 26117985 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 2066174 cgccgtctgccgctcctggc 2066155
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 74900 ttcctcctcgcccaccaccgccaccagc 74873
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 80698 ttcctcctcgcccaccaccgccaccagc 80725
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||||||| ||||| Sbjct: 122850 ttcctcctcgcccaccaccgccaccagc 122877
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Minus Query: 188 cgccgcctcacctccgacgccaaattcctcctcgcccaccaccgccgccagc 239 |||||||||||||||||| | ||||||| ||||||||||| |||||||| Sbjct: 12508171 cgccgcctcacctccgacccggccttcctccgcgcccaccaccaccgccagc 12508120 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 1536222 ttcctcctccgccaccaccgccgccagcc 1536250 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcaccg 189 |||||||| ||||||||||||||| Sbjct: 5135117 cgccgtctcccgctcctggcaccg 5135094
>ref|XM_747611.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g13340) partial mRNA Length = 1164 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 382 cggcctccttatcatcgtcgcct 404 ||||||||||||||||||||||| Sbjct: 1047 cggcctccttatcatcgtcgcct 1069
>emb|BX649606.1| Aspergillus fumigatus BAC pilot project supercontig; segment 2/3 Length = 348551 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 382 cggcctccttatcatcgtcgcct 404 ||||||||||||||||||||||| Sbjct: 246617 cggcctccttatcatcgtcgcct 246595
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 cgtcaccacccaggacacccatg 275 ||||||||||||||||||||||| Sbjct: 270614 cgtcaccacccaggacacccatg 270592
>emb|X79814.1|SLSALHH S.lividans DNA of Orf1, Orf2 and micX Length = 674 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 cgtcaccacccaggacacccatg 275 ||||||||||||||||||||||| Sbjct: 537 cgtcaccacccaggacacccatg 515
>dbj|AK120895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030A06, full insert sequence Length = 1464 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 174 ccgcgccgtctgccgctcctggc 196
>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103803 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 57579 ccgcgccgtctgccgctcctggc 57557
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ccgcgccgtctgccgctcctggc 185 ||||||||||||||||||||||| Sbjct: 119055 ccgcgccgtctgccgctcctggc 119033
>ref|XM_464013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 332 tccggtgccgcgccgtctgccg 353
>ref|XM_464003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 56 tccggtgccgcgccgtctgccg 77
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence Length = 164620 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gtcaccacccaggacacccatg 275 |||||||||||||||||||||| Sbjct: 82862 gtcaccacccaggacacccatg 82841
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gcctccccgaggagatcgtcac 117 |||||||||||||||||||||| Sbjct: 696838 gcctccccgaggagatcgtcac 696817
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 1664842 tccggtgccgcgccgtctgccg 1664863 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 1603008 tccggtgccgcgccgtctgccg 1602987
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 101945 tccggtgccgcgccgtctgccg 101966 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgccg 177 |||||||||||||||||||||| Sbjct: 40111 tccggtgccgcgccgtctgccg 40090
>dbj|AK106803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C01, full insert sequence Length = 1763 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagccc 241 ||||||||| |||||||||||| ||||||| Sbjct: 239 ttcctcctcacccaccaccgccaccagccc 268
>gb|AC119268.12| Mus musculus chromosome 5, clone RP24-324M10, complete sequence Length = 201518 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gtcaccacccaggacacccatg 275 |||||||||||||||||||||| Sbjct: 19303 gtcaccacccaggacacccatg 19282
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gtcaccacccaggacacccatg 275 |||||||||||||||||||||| Sbjct: 100849 gtcaccacccaggacacccatg 100828
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcac 187 |||||||||||||||||||||| Sbjct: 91942 cgccgtctgccgctcctggcac 91921
>ref|NM_194680.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056A20.9), mRNA Length = 1374 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 403 ttcctcctccgccaccaccgccgccagcc 431
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 54798 ttcctcctccgccaccaccgccgccagcc 54826
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 1536225 ttcctcctccgccaccaccgccgccagcc 1536253
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 148979 ttcctcctccgccaccaccgccgccagcc 149007
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ctcgcccaccaccgccgccag 238 ||||||||||||||||||||| Sbjct: 4229864 ctcgcccaccaccgccgccag 4229884
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ccgccgccagccctcgctcccgctc 253 |||||||| |||||||||||||||| Sbjct: 23070618 ccgccgcccgccctcgctcccgctc 23070642
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ccgccgccagccctcgctcccgctc 253 |||||||| |||||||||||||||| Sbjct: 137162 ccgccgcccgccctcgctcccgctc 137186
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ccgccgccagccctcgctcccgctc 253 |||||||| |||||||||||||||| Sbjct: 21266 ccgccgcccgccctcgctcccgctc 21290
>ref|XM_317722.1| Anopheles gambiae str. PEST ENSANGP00000010372 (ENSANGG00000007883), partial mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 caccaccgccgccagccctcg 244 ||||||||||||||||||||| Sbjct: 329 caccaccgccgccagccctcg 349
>dbj|AK101708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060K15, full insert sequence Length = 1629 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttcctcctcgcccaccaccgccgccagcc 240 ||||||||| |||||||||||||||||| Sbjct: 441 ttcctcctccgccaccaccgccgccagcc 469
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ctcgcccaccaccgccgccag 238 ||||||||||||||||||||| Sbjct: 4234636 ctcgcccaccaccgccgccag 4234656
>ref|XM_483419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 369 cgccgtctgccgctcctggc 388
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 cggcgagcggcgccccgtcgcgcg 330 |||||| ||||||||||||||||| Sbjct: 12239 cggcgaccggcgccccgtcgcgcg 12216
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 44554 cgccgtctgccgctcctggc 44573
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ctcctcgcccaccaccgccg 234 |||||||||||||||||||| Sbjct: 97122 ctcctcgcccaccaccgccg 97141
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcaccg 189 |||||||| ||||||||||||||| Sbjct: 6101 cgccgtctcccgctcctggcaccg 6078
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 110002 cgcctcacctccgacgccaa 109983
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 37247 cgccgtctgccgctcctggc 37228 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 22571 cgccgtctgccgctcctggc 22552
>ref|NM_005806.2| Homo sapiens oligodendrocyte lineage transcription factor 2 (OLIG2), mRNA Length = 2505 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1107 cgcctcacctccgacgccaa 1126
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1108 cgcctcacctccgacgccaa 1127
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cctcgcccaccaccgccgcc 236 |||||||||||||||||||| Sbjct: 1091990 cctcgcccaccaccgccgcc 1092009
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 160300 cgcctcacctccgacgccaa 160319
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 14262396 tccggtgccgcgccgtctgc 14262377 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 14235309 tccggtgccgcgccgtctgc 14235328
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgaggagatcgtcacctggg 122 |||||||||||||||||||| Sbjct: 86177 cgaggagatcgtcacctggg 86196
>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038L23, complete sequence Length = 124582 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcctcctcgcccaccaccgccgcc 236 ||||||||||||| |||||||||| Sbjct: 116664 tcctcctcgcccatcaccgccgcc 116641
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcctcctcgcccaccaccgccgcc 236 ||||||||||||| |||||||||| Sbjct: 44855 tcctcctcgcccatcaccgccgcc 44832
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 3292 cgcctcacctccgacgccaa 3311
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aggggcatggcagaagcggc 81 |||||||||||||||||||| Sbjct: 2196447 aggggcatggcagaagcggc 2196466
>gb|BC047511.1| Homo sapiens oligodendrocyte lineage transcription factor 2, mRNA (cDNA clone MGC:51023 IMAGE:5300879), complete cds Length = 2501 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1103 cgcctcacctccgacgccaa 1122
>gb|BC036245.1| Homo sapiens oligodendrocyte lineage transcription factor 2, mRNA (cDNA clone MGC:39835 IMAGE:5303546), complete cds Length = 3275 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1877 cgcctcacctccgacgccaa 1896
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggcaccg 189 |||||||| ||||||||||||||| Sbjct: 139631 cgccgtctcccgctcctggcaccg 139608
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 109600 tccggtgccgcgccgtctgc 109619
>dbj|AB197925.1| Rattus norvegicus Olig2 mRNA for oligodendrocyte transcription factor 2, partial cds Length = 478 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 63 cgcctcacctccgacgccaa 82
>dbj|AK091462.1| Homo sapiens cDNA FLJ34143 fis, clone FCBBF3011570, highly similar to PROTEIN KINASE C-BINDING PROTEIN RACK17 Length = 3259 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1877 cgcctcacctccgacgccaa 1896
>gb|AE012298.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 206 of 460 of the complete genome Length = 12693 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctcgcccaccaccgccgcca 237 |||||||||||||||||||| Sbjct: 7450 ctcgcccaccaccgccgcca 7431
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 cggtgccgcgccgtctgccgctcc 181 |||||||| ||||||||||||||| Sbjct: 3527534 cggtgccgggccgtctgccgctcc 3527511
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gacgagcacttcgacgtgctcgcc 373 |||||||| ||||||||||||||| Sbjct: 2789733 gacgagcagttcgacgtgctcgcc 2789710
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 11625 tccggtgccgcgccgtctgc 11606
>gb|AY129331.1| Mycobacteriophage CJW1, complete genome Length = 75931 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cgtcaccacccaggacaccc 272 |||||||||||||||||||| Sbjct: 19111 cgtcaccacccaggacaccc 19130
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 73784 tccggtgccgcgccgtctgc 73765 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 46697 tccggtgccgcgccgtctgc 46716
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1086 cgcctcacctccgacgccaa 1105
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctcgcccaccaccgccgcca 237 |||||||||||||||||||| Sbjct: 2702172 ctcgcccaccaccgccgcca 2702191
>ref|NG_001275.1| Homo sapiens chemokine (C-X-C motif) ligand 1 pseudogene (CXCL1P) on chromosome 4 Length = 3124 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgctcctggcaccgccgcc 194 |||||||||||||||||||| Sbjct: 1187 ccgctcctggcaccgccgcc 1206
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 27883585 cgccgtctgccgctcctggc 27883604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 27569971 cgccgtctgccgctcctggc 27569952 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 27555295 cgccgtctgccgctcctggc 27555276 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 16545815 cgccgtctgccgctcctggc 16545834
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 14257371 tccggtgccgcgccgtctgc 14257352 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tccggtgccgcgccgtctgc 175 |||||||||||||||||||| Sbjct: 14230284 tccggtgccgcgccgtctgc 14230303
>dbj|AP000041.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 12/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 49615 cgcctcacctccgacgccaa 49634
>ref|XM_217963.3| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC308198), mRNA Length = 1725 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 311 acgccaaagtcctcctggcccaccaccg 338
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL) and NarX-like (narX) genes, complete sequence; NarK (narK), NarM (narM), NarG (narG), NarH (narH), NarJ (narJ), and NarI (narI) genes, complete cds; and unknown gene Length = 15150 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgcgccgtctgccgctcctg 183 |||||||||||||||||||| Sbjct: 206 cgcgccgtctgccgctcctg 225
>ref|XM_221668.3| PREDICTED: Rattus norvegicus oligodendrocyte transcription factor 2 (predicted) (Olig2_predicted), mRNA Length = 1048 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1021 cgcctcacctccgacgccaa 1040
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gaagcggccgtcggcgagcc 93 |||||||||||||||||||| Sbjct: 2061766 gaagcggccgtcggcgagcc 2061785 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cctcgctcccgctcgtcacc 259 |||||||||||||||||||| Sbjct: 38044 cctcgctcccgctcgtcacc 38063
>ref|XM_577739.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502278), mRNA Length = 2232 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 911 acgccaaagtcctcctggcccaccaccg 938
>ref|XM_344829.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC365128), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 932 acgccaaagtcctcctggcccaccaccg 959
>ref|XM_577734.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502273), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 326 acgccaaagtcctcctggcccaccaccg 353
>ref|XM_577731.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502270), mRNA Length = 2889 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 1073 acgccaaagtcctcctggcccaccaccg 1100
>ref|XM_577730.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502269), mRNA Length = 1593 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 179 acgccaaagtcctcctggcccaccaccg 206
>ref|XM_577724.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502263), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 1052 acgccaaagtcctcctggcccaccaccg 1079 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 392 acgccaaagtcctcctggcccaccaccg 419
>ref|XM_344836.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC365140), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 116 acgccaaagtcctcctggcccaccaccg 143
>ref|XM_217957.3| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC292367), mRNA Length = 3618 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 1313 acgccaaagtcctcctggcccaccaccg 1340
>ref|XM_577721.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502260), mRNA Length = 2073 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 659 acgccaaagtcctcctggcccaccaccg 686
>ref|XM_344831.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC365132), mRNA Length = 1638 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 224 acgccaaagtcctcctggcccaccaccg 251
>ref|XM_577713.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502253), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 347 acgccaaagtcctcctggcccaccaccg 374
>ref|XM_577710.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502251), mRNA Length = 1314 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 116 acgccaaagtcctcctggcccaccaccg 143
>ref|XM_577708.1| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC502249), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 116 acgccaaagtcctcctggcccaccaccg 143
>ref|XM_217925.3| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC308188), mRNA Length = 2283 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 230 acgccaaagtcctcctggcccaccaccg 257
>ref|XM_344822.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC365118), mRNA Length = 3492 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 2078 acgccaaagtcctcctggcccaccaccg 2105
>ref|XM_233450.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC298461), mRNA Length = 2034 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 acgccaaattcctcctcgcccaccaccg 231 |||||||| ||||||| ||||||||||| Sbjct: 620 acgccaaagtcctcctggcccaccaccg 647
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 46943 cgccgtctgccgctcctggc 46962
>gb|AF232929.1|AF232929 Mus musculus oligodendrocyte-specific bHLH transcription factor Olig2 gene, complete cds Length = 990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 967 cgcctcacctccgacgccaa 986
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 59704 cgccgtctgccgctcctggc 59685
>gb|AF221520.1|AF221520 Homo sapiens basic helix-loop-helix protein class B 1 (BHLHB1) mRNA, partial cds Length = 2435 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1053 cgcctcacctccgacgccaa 1072
>emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 map 22q22.11, complete sequence Length = 156234 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 31915 cgcctcacctccgacgccaa 31934
>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete sequence Length = 192328 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 185381 cgcctcacctccgacgccaa 185400
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgtctgccgctcctggc 185 |||||||||||||||||||| Sbjct: 61897 cgccgtctgccgctcctggc 61916
>dbj|AK120742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004A10, full insert sequence Length = 4164 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctcgctcccgctcgtcacca 260 |||||||||||||||||||| Sbjct: 157 ctcgctcccgctcgtcacca 176
>ref|XM_311170.2| Anopheles gambiae str. PEST ENSANGP00000019044 (ENSANGG00000016555), partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 cagcaccggcgagcggcgccccgt 324 |||||||||||||||||| ||||| Sbjct: 145 cagcaccggcgagcggcggcccgt 168
>emb|AJ337954.1|HSA337954 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CK22R Length = 788 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 149 cgcctcacctccgacgccaa 168
>emb|AJ341439.1|HSA341439 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FB23RS Length = 565 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 147 cgcctcacctccgacgccaa 166
>emb|AJ338148.1|HSA338148 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DH14R Length = 961 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 148 cgcctcacctccgacgccaa 167
>emb|AJ323257.1|HSA323257 Homo sapiens genomic sequence surrounding NotI site, clone NB1-184R Length = 459 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 148 cgcctcacctccgacgccaa 167
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1108 cgcctcacctccgacgccaa 1127
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 314765 cgcctcacctccgacgccaa 314784
>gb|U48250.1|HSU48250 Human protein kinase C-binding protein RACK17 mRNA, partial cds Length = 2085 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 983 cgcctcacctccgacgccaa 1002
>gb|U88432.1|HSU88432 Human MGSA/GRO pseudogene sequence Length = 3124 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccgctcctggcaccgccgcc 194 |||||||||||||||||||| Sbjct: 1187 ccgctcctggcaccgccgcc 1206
>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112916 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 gccgcgccgtctgccgctcctggc 185 ||||||||||| |||||||||||| Sbjct: 106067 gccgcgccgtcggccgctcctggc 106044
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 gccgcgccgtctgccgctcctggc 185 ||||||||||| |||||||||||| Sbjct: 7660 gccgcgccgtcggccgctcctggc 7637
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgcccaccaccgccgccagc 239 |||||||||||||||||||| Sbjct: 5024514 cgcccaccaccgccgccagc 5024533
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ctcgctcccgctcgtcacca 260 |||||||||||||||||||| Sbjct: 105191 ctcgctcccgctcgtcacca 105210
>gb|M59163.1|LOLLOPIB Lolium perrene pollen allergen (lol pIb) mRNA, complete cds Length = 1236 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cctcctcgcccaccaccgccgcca 237 |||||||||||||| ||||||||| Sbjct: 329 cctcctcgcccacctccgccgcca 352
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 1086 cgcctcacctccgacgccaa 1105
>dbj|AP000287.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q77A10, complete sequence Length = 22275 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 2380 cgcctcacctccgacgccaa 2399
>dbj|AP000185.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 12/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 55591 cgcctcacctccgacgccaa 55610
>dbj|AP000109.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 12/20 Length = 100000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgcctcacctccgacgccaa 210 |||||||||||||||||||| Sbjct: 55591 cgcctcacctccgacgccaa 55610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,491,523 Number of Sequences: 3902068 Number of extensions: 3491523 Number of successful extensions: 77438 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74046 Number of HSP's gapped (non-prelim): 3386 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
