ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart38a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 1120 bits (565), Expect = 0.0 Identities = 565/565 (100%) Strand = Plus / Plus Query: 43 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 60 Query: 103 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 120 Query: 163 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 180 Query: 223 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 240 Query: 283 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 300 Query: 343 tggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctca 360 Query: 403 ccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactacc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactacc 420 Query: 463 acagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggca 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggca 480 Query: 523 acctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcg 540 Query: 583 tcttcttcgccaacgacacgtacct 607 ||||||||||||||||||||||||| Sbjct: 541 tcttcttcgccaacgacacgtacct 565
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 593 bits (299), Expect = e-166 Identities = 302/303 (99%) Strand = Plus / Plus Query: 1 cctcacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3402 cctcacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgct 3461 Query: 61 ggtgccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3462 ggtgccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgg 3521 Query: 121 gagggctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtgg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3522 gagggctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtgg 3581 Query: 181 tgctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3582 tgctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggca 3641 Query: 241 tcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgacc 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3642 tcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccatcgacc 3701 Query: 301 aag 303 ||| Sbjct: 3702 aag 3704 Score = 583 bits (294), Expect = e-163 Identities = 297/298 (99%) Strand = Plus / Plus Query: 302 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4253 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 4312 Query: 362 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggtgga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4313 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggtgga 4372 Query: 422 gaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4373 gaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgct 4432 Query: 482 taaaaccatcaccctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4433 taaaaccatcaccctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaa 4492 Query: 542 ctcatggatctaccccgccgccaactaccgatacagccgcgtcttcttcgccaacgac 599 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4493 ctcatggatctaccccgccgccaactaccgctacagccgcgtcttcttcgccaacgac 4550
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 432 bits (218), Expect = e-118 Identities = 385/440 (87%), Gaps = 3/440 (0%) Strand = Plus / Plus Query: 162 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 49 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 108 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 168 Query: 282 agctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggag 341 ||||||||||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 169 agctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagc 228 Query: 342 ctggagcagtgggtgacg---agcctgccgtcgctgacgacgggggagtccaagttcggc 398 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 229 ctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggc 288 Query: 399 ctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaac 458 | || ||||||||||| || || |||||||| |||||||| |||||| ||||||| ||| Sbjct: 289 gtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaagaac 348 Query: 459 taccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagc 518 |||||||| ||||||| | || || |||||||||||| ||||||||||||||||| | Sbjct: 349 caccacagcaacgagttcttcctcaagaccatcaccctcgacgacgtccccggccgcgcc 408 Query: 519 ggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagc 578 ||| | || |||| |||||||||| ||| |||||||||||| ||| ||||| ||| | Sbjct: 409 ggcgccgtcgtcttcctcgccaactcctgggtctaccccgccgacaagtaccgttacgac 468 Query: 579 cgcgtcttcttcgccaacga 598 |||||||||||||||||||| Sbjct: 469 cgcgtcttcttcgccaacga 488
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 430 bits (217), Expect = e-117 Identities = 405/467 (86%), Gaps = 3/467 (0%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 28 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 87 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 88 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 147 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 320 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 148 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 207 Query: 321 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 380 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 208 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 267 Query: 381 ggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggc 440 || ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct: 268 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 327 Query: 441 gccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccac 500 ||| |||||||||| ||| ||||| | |||||||| | || || || ||||||||| || Sbjct: 328 gccgtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctcgac 387 Query: 501 gacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgcc 560 ||||| ||||||||| ||| | ||||||||||||||||||| ||| |||||||||| Sbjct: 388 gacgtgcccggccgcggcgccg---tcaccttcgtcgccaactcctgggtctaccccgcg 444 Query: 561 gccaactaccgatacagccgcgtcttcttcgccaacgacacgtacct 607 | ||| ||||| |||| ||||||||||||| ||||||| |||||||| Sbjct: 445 ggcaagtaccgctacaaccgcgtcttcttctccaacgatacgtacct 491
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 377 bits (190), Expect = e-101 Identities = 360/416 (86%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 90 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 149 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 150 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 209 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 320 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 210 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 269 Query: 321 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 380 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 270 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 329 Query: 381 ggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggc 440 || ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct: 330 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 389 Query: 441 gccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccac 500 ||| |||||||||| ||| ||||| | |||||||| | || || || ||||||||| || Sbjct: 390 gccgtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctcgac 449 Query: 501 gacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccc 556 ||||| ||||||||| ||| | ||| ||||||||||||||| ||| ||||||| Sbjct: 450 gacgtgcccggccgcggcgccg---tcaacttcgtcgccaactcctgggtctaccc 502
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 266 bits (134), Expect = 8e-68 Identities = 373/452 (82%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 34 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 93 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 94 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 153 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 154 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 213 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 389 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 214 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 273 Query: 390 aagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtc 449 |||||||| | || ||||| ||||||||||||||| | || | || ||||||||| || Sbjct: 274 aagttcggggtgacgttcgagtgggaggtggagaagatgggcatacccggcgccatcatc 333 Query: 450 gtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtcccc 509 ||||| ||| ||||| | |||||||| | || || |||||||||||| || |||||||| Sbjct: 334 gtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcgacaacgtcccc 393 Query: 510 ggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaactac 569 |||| |||| | || ||||||||||||||| ||||||||||||||| |||| || Sbjct: 394 ggcc---acggcgccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtat 450 Query: 570 cgatacagccgcgtcttcttcgccaacgacac 601 || |||| ||||||||||||| |||||||||| Sbjct: 451 cgctacaaccgcgtcttcttctccaacgacac 482
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 266 bits (134), Expect = 8e-68 Identities = 373/452 (82%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 208 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 209 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 268 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 269 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 328 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 389 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 329 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 388 Query: 390 aagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtc 449 |||||||| | || ||||| ||||||||||||||| | || | || ||||||||| || Sbjct: 389 aagttcggggtgacgttcgagtgggaggtggagaagatgggcatacccggcgccatcatc 448 Query: 450 gtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtcccc 509 ||||| ||| ||||| | |||||||| | || || |||||||||||| || |||||||| Sbjct: 449 gtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcgacaacgtcccc 508 Query: 510 ggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaactac 569 |||| |||| | || ||||||||||||||| ||||||||||||||| |||| || Sbjct: 509 ggcc---acggcgccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtat 565 Query: 570 cgatacagccgcgtcttcttcgccaacgacac 601 || |||| ||||||||||||| |||||||||| Sbjct: 566 cgctacaaccgcgtcttcttctccaacgacac 597
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 250 bits (126), Expect = 5e-63 Identities = 371/452 (82%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 190 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||| Sbjct: 191 aacgacttcggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacc 250 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 251 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 310 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 389 |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 311 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 370 Query: 390 aagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtc 449 |||||||| | || ||||| ||||||||||||||| | || | || ||||||||| || Sbjct: 371 aagttcggggtgacgttcgagtgggaggtggagaagatgggcatacccggcgccatcatc 430 Query: 450 gtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtcccc 509 ||||| ||| ||||| | |||||||| | || || |||||||||||| || |||||||| Sbjct: 431 gtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctcgacaacgtcccc 490 Query: 510 ggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaactac 569 |||| |||| | || ||||||||||||||| ||||||||||||||| |||| || Sbjct: 491 ggcc---acggcgccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtat 547 Query: 570 cgatacagccgcgtcttcttcgccaacgacac 601 || |||| ||||||||||||| |||||||||| Sbjct: 548 cgctacaaccgcgtcttcttctccaacgacac 579
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 236 bits (119), Expect = 7e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 162 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 42943 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 42944 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 43003 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 43004 agctccaccgccgtcgacc 43022 Score = 210 bits (106), Expect = 4e-51 Identities = 240/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 43497 Query: 375 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 434 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 43498 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 43557 Query: 435 ccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcacc 494 ||||| |||||| ||||||| ||| |||||||| ||||||| | || || ||||||||| Sbjct: 43558 ccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcacc 43617 Query: 495 ctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctac 554 ||| ||||||||||||||||| |||| | || |||| |||||||||| ||| ||||| Sbjct: 43618 ctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctac 43677 Query: 555 cccgccgccaactaccgatacagccgcgtcttcttcgccaacga 598 ||||||| ||| ||||| ||| ||||||||||||||||||||| Sbjct: 43678 cccgccgacaagtaccgttacgaccgcgtcttcttcgccaacga 43721 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 61007 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 61066 Query: 590 cgccaacga 598 ||||||||| Sbjct: 61067 cgccaacga 61075 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 2913 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 2972 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 2973 ccaagttcttcctcaagaccatcaccctccatgatgtccc 3012
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 7e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 162 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27798813 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27798814 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27798873 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 27798874 agctccaccgccgtcgacc 27798892 Score = 210 bits (106), Expect = 4e-51 Identities = 240/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27799367 Query: 375 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 434 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 27799368 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27799427 Query: 435 ccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcacc 494 ||||| |||||| ||||||| ||| |||||||| ||||||| | || || ||||||||| Sbjct: 27799428 ccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcacc 27799487 Query: 495 ctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctac 554 ||| ||||||||||||||||| |||| | || |||| |||||||||| ||| ||||| Sbjct: 27799488 ctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctac 27799547 Query: 555 cccgccgccaactaccgatacagccgcgtcttcttcgccaacga 598 ||||||| ||| ||||| ||| ||||||||||||||||||||| Sbjct: 27799548 cccgccgacaagtaccgttacgaccgcgtcttcttcgccaacga 27799591 Score = 182 bits (92), Expect = 9e-43 Identities = 217/258 (84%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 401 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30023563 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30023622 Query: 402 accttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactac 461 || ||||| ||||||||||||||| | || | || ||||||||| ||||||| ||| || Sbjct: 30023623 acgttcgagtgggaggtggagaagatgggcatacccggcgccatcatcgtcaagaacaac 30023682 Query: 462 cacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggc 521 ||| | |||||||| | || || |||||||||||| || |||||||||||| |||| Sbjct: 30023683 cacgccgccgagttcttcctcaagaccatcaccctcgacaacgtccccggcc---acggc 30023739 Query: 522 aacctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgc 581 | || ||||||||||||||| ||||||||||||||| |||| || || |||| |||| Sbjct: 30023740 gccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtatcgctacaaccgc 30023799 Query: 582 gtcttcttcgccaacgac 599 ||||||||| |||||||| Sbjct: 30023800 gtcttcttctccaacgac 30023817 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30023352 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30023353 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30023412 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 30023413 tgccagctcgtcagctcctccctcgtcgacc 30023443 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 27816877 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 27816936 Query: 590 cgccaacga 598 ||||||||| Sbjct: 27816937 cgccaacga 27816945 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 27758784 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 27758843 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 27758844 ccaagttcttcctcaagaccatcaccctccatgatgtccc 27758883 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 22625516 acacactcacgcaacacaca 22625535 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 20262030 gagaggaggccaagaacaag 20262049
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 236 bits (119), Expect = 7e-59 Identities = 232/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtcc 389 ||||||||| | |||||||||||| ||||||||||||||||||||||||| || |||||| Sbjct: 945 gcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgaccggcgagtcc 1004 Query: 390 aagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtc 449 ||||||||| |||| ||||||||||||||||||||||| || |||||||| ||| ||||| Sbjct: 1005 aagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtc 1064 Query: 450 gtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtcccc 509 ||||| ||| ||||| | |||||||| | || || || ||||||||| ||||||| ||| Sbjct: 1065 gtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctcgacgacgtgccc 1124 Query: 510 ggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaactac 569 |||||| ||| | ||||||||||||||||||| ||| |||||||||| | ||| ||| Sbjct: 1125 ggccgcggcgccg---tcaccttcgtcgccaactcctgggtctaccccgcgggcaagtac 1181 Query: 570 cgatacagccgcgtcttcttcgccaacga 598 || |||| ||||||||||||| ||||||| Sbjct: 1182 cgctacaaccgcgtcttcttctccaacga 1210 Score = 212 bits (107), Expect = 1e-51 Identities = 146/159 (91%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 235 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 236 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 295 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgac 299 || |||||||||||||| |||||||||||| ||||||| Sbjct: 296 ggggtcacctgccagctcatcagctccaccctcgtcgac 334
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 7e-59 Identities = 134/139 (96%) Strand = Plus / Plus Query: 162 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27890137 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27890138 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27890197 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 27890198 agctccaccgccgtcgacc 27890216 Score = 210 bits (106), Expect = 4e-51 Identities = 240/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27890691 Query: 375 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 434 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 27890692 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27890751 Query: 435 ccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcacc 494 ||||| |||||| ||||||| ||| |||||||| ||||||| | || || ||||||||| Sbjct: 27890752 ccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcacc 27890811 Query: 495 ctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctac 554 ||| ||||||||||||||||| |||| | || |||| |||||||||| ||| ||||| Sbjct: 27890812 ctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctac 27890871 Query: 555 cccgccgccaactaccgatacagccgcgtcttcttcgccaacga 598 ||||||| ||| ||||| ||| ||||||||||||||||||||| Sbjct: 27890872 cccgccgacaagtaccgttacgaccgcgtcttcttcgccaacga 27890915 Score = 182 bits (92), Expect = 9e-43 Identities = 217/258 (84%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 401 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30114985 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30115044 Query: 402 accttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactac 461 || ||||| ||||||||||||||| | || | || ||||||||| ||||||| ||| || Sbjct: 30115045 acgttcgagtgggaggtggagaagatgggcatacccggcgccatcatcgtcaagaacaac 30115104 Query: 462 cacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggc 521 ||| | |||||||| | || || |||||||||||| || |||||||||||| |||| Sbjct: 30115105 cacgccgccgagttcttcctcaagaccatcaccctcgacaacgtccccggcc---acggc 30115161 Query: 522 aacctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgc 581 | || ||||||||||||||| ||||||||||||||| |||| || || |||| |||| Sbjct: 30115162 gccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtatcgctacaaccgc 30115221 Query: 582 gtcttcttcgccaacgac 599 ||||||||| |||||||| Sbjct: 30115222 gtcttcttctccaacgac 30115239 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30114774 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30114775 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30114834 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 30114835 tgccagctcgtcagctcctccctcgtcgacc 30114865 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 27908201 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 27908260 Query: 590 cgccaacga 598 ||||||||| Sbjct: 27908261 cgccaacga 27908269 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 27850107 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 27850166 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 27850167 ccaagttcttcctcaagaccatcaccctccatgatgtccc 27850206 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 22618545 acacactcacgcaacacaca 22618564 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 20255059 gagaggaggccaagaacaag 20255078
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 236 bits (119), Expect = 7e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 162 cggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 15080 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 15079 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 15020 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 15019 agctccaccgccgtcgacc 15001 Score = 210 bits (106), Expect = 4e-51 Identities = 240/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Minus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 14526 Query: 375 acgacgggggagtccaagttcggcctcaccttcgactgggaggtggagaagctcggggtg 434 |||||||||||||| ||||||| | || ||||||||||| || || |||||||| ||| Sbjct: 14525 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 14466 Query: 435 ccgggcgccatcgtcgtcaacaactaccacagctccgagttcctgcttaaaaccatcacc 494 ||||| |||||| ||||||| ||| |||||||| ||||||| | || || ||||||||| Sbjct: 14465 ccgggggccatcatcgtcaagaaccaccacagcaacgagttcttcctcaagaccatcacc 14406 Query: 495 ctccacgacgtccccggccgcagcggcaacctcaccttcgtcgccaactcatggatctac 554 ||| ||||||||||||||||| |||| | || |||| |||||||||| ||| ||||| Sbjct: 14405 ctcgacgacgtccccggccgcgccggcgccgtcgtcttcctcgccaactcctgggtctac 14346 Query: 555 cccgccgccaactaccgatacagccgcgtcttcttcgccaacga 598 ||||||| ||| ||||| ||| ||||||||||||||||||||| Sbjct: 14345 cccgccgacaagtaccgttacgaccgcgtcttcttcgccaacga 14302 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Minus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 55110 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 55051 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 55050 ccaagttcttcctcaagaccatcaccctccatgatgtccc 55011
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 182 bits (92), Expect = 9e-43 Identities = 217/258 (84%), Gaps = 3/258 (1%) Strand = Plus / Minus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctc 401 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 84188 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 84129 Query: 402 accttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactac 461 || ||||| ||||||||||||||| | || | || ||||||||| ||||||| ||| || Sbjct: 84128 acgttcgagtgggaggtggagaagatgggcatacccggcgccatcatcgtcaagaacaac 84069 Query: 462 cacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggc 521 ||| | |||||||| | || || |||||||||||| || |||||||||||| |||| Sbjct: 84068 cacgccgccgagttcttcctcaagaccatcaccctcgacaacgtccccggcc---acggc 84012 Query: 522 aacctcaccttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgc 581 | || ||||||||||||||| ||||||||||||||| |||| || || |||| |||| Sbjct: 84011 gccgtcgtcttcgtcgccaactcctggatctaccccgcctccaagtatcgctacaaccgc 83952 Query: 582 gtcttcttcgccaacgac 599 ||||||||| |||||||| Sbjct: 83951 gtcttcttctccaacgac 83934 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Minus Query: 150 aacaagagcgcccggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| ||||||||| | | || |||||||||||||||| || ||| || Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 84399 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 84398 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 84339 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 84338 tgccagctcgtcagctcctccctcgtcgacc 84308
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 161 bits (81), Expect = 3e-36 Identities = 185/219 (84%), Gaps = 3/219 (1%) Strand = Plus / Plus Query: 389 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 448 |||||||| | |||||||||||||| |||||| ||||| ||||||||||| |||||| | Sbjct: 351 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggggccatcat 410 Query: 449 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 |||||| ||| ||||| |||||||||| | || || |||||||||||| || |||| || Sbjct: 411 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 470 Query: 509 cggccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccgccaacta 568 ||||||| |||| | || ||||||||||||||||||| ||||||| ||||| || Sbjct: 471 cggccgc---ggcaccatcgtcttcgtcgccaactcatgggtctacccgcaggccaagta 527 Query: 569 ccgatacagccgcgtcttcttcgccaacgacacgtacct 607 ||| |||| |||||||||||||||||||||||||||||| Sbjct: 528 ccgctacaaccgcgtcttcttcgccaacgacacgtacct 566 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 165 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 224 ||||||||| | || || |||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 121 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 180 Query: 225 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 284 | |||| |||||| || |||| |||||||| ||||||||||||||||| |||||| Sbjct: 181 cacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 240 Query: 285 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 344 |||||| ||||||||| ||||||| || |||||||||||||||||||||||| | ||| Sbjct: 241 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 300 Query: 345 gagcagtgg 353 ||||||||| Sbjct: 301 gagcagtgg 309
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 159 bits (80), Expect = 1e-35 Identities = 186/218 (85%), Gaps = 5/218 (2%) Strand = Plus / Plus Query: 391 agttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcg 450 ||||| || ||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 299 agttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcgccatcatcg 358 Query: 451 tcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccg 510 |||| ||| ||||| |||||||||| | || || |||||||||||| |||||||||||| Sbjct: 359 tcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcaacgacgtccccg 418 Query: 511 gccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccg-ccaactac 569 ||| ||||| | || |||||||||||||||||||||||| ||||| | |||| ||| Sbjct: 419 gcc---acggcaccatcgtcttcgtcgccaactcatggatcta-cccgcagtccaagtac 474 Query: 570 cgatacagccgcgtcttcttcgccaacgacacgtacct 607 || |||| ||||||||||||| |||||||||||||||| Sbjct: 475 cgctacaaccgcgtcttcttctccaacgacacgtacct 512 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 232 tcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccg 291 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140 tcgacggcatcggcgagttcctcggccgcggcgtcacctgccagcttatcagctccaccg 199 Query: 292 ccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagt 351 |||||||| |||||||| ||||||||| |||||||||||||| |||||||||| Sbjct: 200 tcgtcgaccctaacaacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagt 259 Query: 352 gg 353 || Sbjct: 260 gg 261
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 111 bits (56), Expect = 3e-21 Identities = 174/210 (82%), Gaps = 5/210 (2%) Strand = Plus / Plus Query: 391 agttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcg 450 ||||| || ||||||||||||||||||||||||||| ||| || |||||||||||| ||| Sbjct: 2820 agttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgggcgccatcatcg 2879 Query: 451 tcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccccg 510 | || ||| ||||| |||||||||| | || || ||||||||| || |||||||||||| Sbjct: 2880 tgaagaacaaccacgcctccgagttcttcctcaagaccatcaccatcgacgacgtccccg 2939 Query: 511 gccgcagcggcaacctcaccttcgtcgccaactcatggatctaccccgccg-ccaactac 569 ||| |||| | || ||||||||||||||||||| | || ||||| | ||| ||| Sbjct: 2940 gcc---acggccccatcgtcttcgtcgccaactcatgggtgta-cccgcagtacaagtac 2995 Query: 570 cgatacagccgcgtcttcttcgccaacgac 599 || |||| ||||||||||||| |||||||| Sbjct: 2996 cgctacaaccgcgtcttcttctccaacgac 3025 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 229 tcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctcca 288 |||| |||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446 Query: 289 ccgccgtcgacc 300 ||| |||||||| Sbjct: 2447 ccgtcgtcgacc 2458 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 165 ctcaagggcacggtggtgctcatgcgcaagaacgtgct 202 |||||||||| |||||||||||||||||| |||||| Sbjct: 2317 ctcaagggcaacctggtgctcatgcgcaagaccgtgct 2354
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 244 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 303 Query: 590 cgccaacga 598 ||||||||| Sbjct: 304 cgccaacga 312
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 723 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 782 Query: 590 cgccaacga 598 ||||||||| Sbjct: 783 cgccaacga 791
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 717 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 776 Query: 590 cgccaacga 598 ||||||||| Sbjct: 777 cgccaacga 785
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 395 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 454 Query: 590 cgccaacga 598 ||||||||| Sbjct: 455 cgccaacga 463
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 724 cttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttctt 783 Query: 590 cgccaacga 598 ||||||||| Sbjct: 784 cgccaacga 792
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 189 cgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgag 248 |||||||||| || ||| |||||||||||||||||||| || ||| || || |||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 249 ttcctcggcaagggcgtcacctgccagcttatcagctcc 287 ||||||||| ||||||||||||||||| |||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 361 gcctgccgtcgctgacgacgggggagtccaagttcgg 397 |||||||||||| ||||||||| |||||||||||||| Sbjct: 173 gcctgccgtcgcggacgacgggagagtccaagttcgg 209 Score = 48.1 bits (24), Expect = 0.034 Identities = 60/72 (83%) Strand = Plus / Plus Query: 530 cttcgtcgccaactcatggatctaccccgccgccaactaccgatacagccgcgtcttctt 589 ||||||||||||||| ||| ||||||||||| || | || | | ||||||||||||| Sbjct: 339 cttcgtcgccaactcctgggtctaccccgcctccgggtgtcgctccggccgcgtcttctt 398 Query: 590 cgccaacgacac 601 | |||||||||| Sbjct: 399 ctccaacgacac 410
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/92 (82%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 466 gctccgagttcctgcttaaaaccatcaccctccacgacgtccccggccgcagcggcaacc 525 ||||||||| |||||| || || |||||||||||| |||||||||| | |||| | Sbjct: 504 gctccgagtacctgctcaagacgctcaccctccacggcgtccccggc---aagggcaccg 560 Query: 526 tcaccttcgtcgccaactcatggatctacccc 557 || ||||||||||||||| |||||||||||| Sbjct: 561 tcgtcttcgtcgccaactcctggatctacccc 592 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 ccgcgtcttcttcgccaacgacac 601 |||| ||||||||||||||||||| Sbjct: 601 ccgcctcttcttcgccaacgacac 624
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 65371 ggtgggcgcggaggcggagctggag 65347
>ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LOC665118 (LOC665118), mRNA Length = 444 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 230 ggtgggcgcggaggcggagctggag 206
>ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 (Drosophila), transcript variant 2 (Dlg5), mRNA Length = 7853 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 117 ggtgggcgcggaggcggagctggag 141
>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete sequence Length = 203950 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 47104 ggtgggcgcggaggcggagctggag 47128
>dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1109K17 product:discs, large homolog 5 (Drosophila), full insert sequence Length = 7852 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 118 ggtgggcgcggaggcggagctggag 142
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 1891 cacacacactcacgcaacacacat 1914
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 161083 cacacacactcacgcaacacacat 161106
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 4075 cacacacactcacgcaacacacat 4098
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 1869 cacacacactcacgcaacacacat 1892
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 1891 cacacacactcacgcaacacacat 1914
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 |||||||||||||||||||||||| Sbjct: 1870 cacacacactcacgcaacacacat 1893
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 434 gccgggcgccatcgtcgtcaaca 456 ||||||||||||||||||||||| Sbjct: 2111639 gccgggcgccatcgtcgtcaaca 2111661
>gb|AF178117.1|AF178117 Rhodospirillum rubrum polyhydroxyalkanoate synthase (PHA C) gene, complete cds Length = 2990 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 434 gccgggcgccatcgtcgtcaaca 456 ||||||||||||||||||||||| Sbjct: 734 gccgggcgccatcgtcgtcaaca 756
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 325 tgggcgcggaggcggagctgga 346 |||||||||||||||||||||| Sbjct: 1904267 tgggcgcggaggcggagctgga 1904288
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacac 25 |||||||||||||||||||||| Sbjct: 67475 cacacacactcacgcaacacac 67496
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 caagttcggcctcaccttcgac 410 |||||||||||||||||||||| Sbjct: 4616430 caagttcggcctcaccttcgac 4616409
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 ctcaagggcacggtggtgctca 186 |||||||||||||||||||||| Sbjct: 1464951 ctcaagggcacggtggtgctca 1464930
>gb|AY359572.1| Zea mays B73 acc oxidase (ACO15) gene, complete cds Length = 2960 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cgggcgccatcgtcgtcaaca 456 ||||||||||||||||||||| Sbjct: 2041 cgggcgccatcgtcgtcaaca 2061
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the gene for neuropeptide FF 1; RFamide-related peptide receptor (OT7T022), the 3' end of a novel gene (FLJ10751) and two CpG islands, complete sequence Length = 80236 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gaggagaggaggccaagaaca 108 ||||||||||||||||||||| Sbjct: 46254 gaggagaggaggccaagaaca 46274
>ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC658981), mRNA Length = 4060 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ggcgccaccatcatcgacggcatcg 243 ||||||| ||||||||||||||||| Sbjct: 3298 ggcgccatcatcatcgacggcatcg 3322
>emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 112319 ccaccatcatcgacggcttcggcga 112343
>dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groES and groEL genes, complete cds Length = 2389 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 |||||||||||||||| |||||||| Sbjct: 1517 ccaccatcatcgacggtatcggcga 1541
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 cacacactcacgcaacacaca 26 ||||||||||||||||||||| Sbjct: 40763 cacacactcacgcaacacaca 40743
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 cacacactcacgcaacacaca 26 ||||||||||||||||||||| Sbjct: 137837 cacacactcacgcaacacaca 137817
>gb|AF079588.1|AF079588 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cgggcgccatcgtcgtcaaca 456 ||||||||||||||||||||| Sbjct: 791 cgggcgccatcgtcgtcaaca 811
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 42630 acacactcacgcaacacaca 42611
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 accatcaccctccacgacgtcccc 509 |||||||||||||||||| ||||| Sbjct: 894464 accatcaccctccacgacctcccc 894441
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3213 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 1601 gagaggaggccaagaacaag 1620
>ref|XM_464767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 53 gctccaccgccgtcgaccaa 72
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 773 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0011L09.15), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 1352 gagaggaggccaagaacaag 1371
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tcgacggcatcggcgagttc 251 |||||||||||||||||||| Sbjct: 82079 tcgacggcatcggcgagttc 82060
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 293 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 352 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 353 ccaagttcttcctcaagaccatcaccctccatgatgtccc 392
>gb|AY551431.1| Hordeum vulgare subsp. vulgare GA 3-oxidase 2 (GA3ox2) mRNA, complete cds Length = 1594 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtgccgggcgccatcgtcgtcaac 455 |||||||||||||| ||||||||| Sbjct: 912 gtgccgggcgccatggtcgtcaac 935
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 ||||||||| |||||||||||||| Sbjct: 68725 cacacacacccacgcaacacacat 68748
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tgccgtcgctgacgacgggg 383 |||||||||||||||||||| Sbjct: 36217 tgccgtcgctgacgacgggg 36236
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 53789 gagaggaggccaagaacaag 53770
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 gcgccatcgtcgtcaacaac 458 |||||||||||||||||||| Sbjct: 2256299 gcgccatcgtcgtcaacaac 2256280
>gb|AY359573.1| Zea mays B73 acc oxidase (ACO31) mRNA, complete cds Length = 1240 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gggcgccatcgtcgtcaaca 456 |||||||||||||||||||| Sbjct: 759 gggcgccatcgtcgtcaaca 778
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 2473899 catcatcgacggcatcggcg 2473918
>gb|AC165143.3| Mus musculus BAC clone RP24-391N16 from chromosome 7, complete sequence Length = 165017 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctcacacacactcacgcaacacac 25 ||||||||||||||| |||||||| Sbjct: 45968 ctcacacacactcacacaacacac 45945
>ref|XM_752573.1| Ustilago maydis 521 hypothetical protein (UM01519.1) partial mRNA Length = 5133 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 aggcggagctggagcagtgg 353 |||||||||||||||||||| Sbjct: 2840 aggcggagctggagcagtgg 2859
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaggaggccaagaacaagat 112 |||||||||||||||||||| Sbjct: 4795 gaggaggccaagaacaagat 4814
>gb|AY386371.1| Yaba monkey tumor virus, complete genome Length = 134721 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 catcgtcgtcaacaactacc 462 |||||||||||||||||||| Sbjct: 14115 catcgtcgtcaacaactacc 14134
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tccatcttcactgaaaagtgaaaa 50 ||||||||||| |||||||||||| Sbjct: 15168 tccatcttcaccgaaaagtgaaaa 15191
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 ||||||||| |||||||||||||| Sbjct: 310135 cacacacacccacgcaacacacat 310158
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 gcgccatcgtcgtcaacaac 458 |||||||||||||||||||| Sbjct: 180263 gcgccatcgtcgtcaacaac 180244
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 653887 catcatcgacggcatcggcg 653906
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 gcgccatcgtcgtcaacaac 458 |||||||||||||||||||| Sbjct: 32882 gcgccatcgtcgtcaacaac 32863
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 126301 gagaggaggccaagaacaag 126282
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of glycopeptide antibiotic A40926, strain ATCC 39727 Length = 89153 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 gaagctcggggtgccgggcg 441 |||||||||||||||||||| Sbjct: 56754 gaagctcggggtgccgggcg 56735
>emb|AJ307671.1|BAC221D7 Mus musculus BAC22107 partial stk33 gene Length = 158201 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctcacacacactcacgcaacacac 25 ||||||||||||||| |||||||| Sbjct: 98758 ctcacacacactcacacaacacac 98735
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 216 ttcggcgccaccatcatcgacggcatcggcga 247 |||| |||||||||||||| |||| ||||||| Sbjct: 1835833 ttcgccgccaccatcatcggcggcttcggcga 1835864
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 85112 gagaggaggccaagaacaag 85093
>dbj|AB189152.1| Hordeum vulgare GA3ox mRNA for gibberellin 3beta-hydroxylase, complete cds Length = 1332 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtgccgggcgccatcgtcgtcaac 455 |||||||||||||| ||||||||| Sbjct: 918 gtgccgggcgccatggtcgtcaac 941
>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence Length = 167532 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 ||||||||||||| |||||||||| Sbjct: 60056 cacacacactcacacaacacacat 60079
>gb|AY948318.1| Haliotis discus hannai clone KHdh50 microsatellite sequence Length = 51 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacat 27 ||||||||||||| |||||||||| Sbjct: 19 cacacacactcacacaacacacat 42
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gaggagaggaggccaagaac 107 |||||||||||||||||||| Sbjct: 139186 gaggagaggaggccaagaac 139205
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ctcaagggcacggtggtgct 184 |||||||||||||||||||| Sbjct: 2352289 ctcaagggcacggtggtgct 2352308
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tgaaaagtgaaaaacagtgt 57 |||||||||||||||||||| Sbjct: 31614 tgaaaagtgaaaaacagtgt 31595
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 57337 gagaggaggccaagaacaag 57356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 8315788 gagaggaggccaagaacaag 8315769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 11856616 gagaggaggccaagaacaag 11856597
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tgccgtcgctgacgacgggg 383 |||||||||||||||||||| Sbjct: 4064555 tgccgtcgctgacgacgggg 4064574
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12678450 gagaggaggccaagaacaag 12678469
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 486 accatcaccctccacgacgtccccggcc 513 |||||||||||| |||||||||| |||| Sbjct: 18790447 accatcaccctcaacgacgtcccgggcc 18790420 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 9257767 gagaggaggccaagaacaag 9257786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12246668 gagaggaggccaagaacaag 12246687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 23122014 gagaggaggccaagaacaag 23121995
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 7256294 gctccaccgccgtcgaccaa 7256313
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 27388692 gagaggaggccaagaacaag 27388711
>gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, complete cds Length = 4083 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 177 gtggtgctcatgcgcaagaacgtgctggacctcaac 212 |||||||| ||||||||||| ||| ||||| ||||| Sbjct: 73 gtggtgctgatgcgcaagaatgtgttggacttcaac 108
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 catcttcactgaaaagtgaaaaacagtg 56 ||||||||||||||| || ||||||||| Sbjct: 99888 catcttcactgaaaactgtaaaacagtg 99915
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 71587 gagaggaggccaagaacaag 71606
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 169209 gagaggaggccaagaacaag 169228
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cccggctcaagggcacggtggtgc 183 |||||||||| ||||||||||||| Sbjct: 5837219 cccggctcaacggcacggtggtgc 5837242
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 tgccgggcgccatcgtcgtc 452 |||||||||||||||||||| Sbjct: 4138868 tgccgggcgccatcgtcgtc 4138887
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 83058 gagaggaggccaagaacaag 83077
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1010G04a Length = 61450 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 27331 gagaggaggccaagaacaag 27350
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 156231 gctccaccgccgtcgaccaa 156250
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 32102 gctccaccgccgtcgaccaa 32121
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 359 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 418 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 419 ccaagttcttcctcaagaccatcaccctccatgatgtccc 458
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 40.1 bits (20), Expect = 8.3 Identities = 80/100 (80%) Strand = Plus / Plus Query: 409 actgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaacaactaccacagct 468 |||||||| |||| |||| || ||||| || |||||| || |||| ||| ||||||| Sbjct: 367 actgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagta 426 Query: 469 ccgagttcctgcttaaaaccatcaccctccacgacgtccc 508 || ||||| | || || |||||||||||||| || ||||| Sbjct: 427 ccaagttcttcctcaagaccatcaccctccatgatgtccc 466
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>dbj|AK063747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G06, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tgccgtcgctgacgacgggg 383 |||||||||||||||||||| Sbjct: 168 tgccgtcgctgacgacgggg 187
>emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene for putative oxidoreductase, exons 1-8 Length = 2254 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cgccgtcgaccaagacaacggcgg 313 |||||||||||||| ||||||||| Sbjct: 875 cgccgtcgaccaagccaacggcgg 898
>gb|AY598950.1| Sphingomonas sp. tfd44 insertion sequence IS6100 chlorocatechol catabolic gene cluster, complete sequence; putative ferredoxin gene, complete cds; putative ferredoxin reductase gene, partial cds; and unknown gene Length = 4709 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cggcaacctcaccttcgtcg 537 |||||||||||||||||||| Sbjct: 3658 cggcaacctcaccttcgtcg 3639
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tccatcttcactgaaaagtgaaaa 50 ||||||||||| |||||||||||| Sbjct: 93451 tccatcttcaccgaaaagtgaaaa 93428
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 2354751 catcatcgacggcatcggcg 2354732
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctcacacacactcacgcaacacac 25 ||||||||||| |||||||||||| Sbjct: 27818 ctcacacacacacacgcaacacac 27841
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12685790 gagaggaggccaagaacaag 12685809
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tgccgtcgctgacgacgggg 383 |||||||||||||||||||| Sbjct: 4073249 tgccgtcgctgacgacgggg 4073268
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 11856287 gagaggaggccaagaacaag 11856268
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17, complete sequence Length = 99093 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 28356 gagaggaggccaagaacaag 28337
>gb|U42336.1|TAU42336 Triticum aestivum ACC synthase (TA-ACS2) gene, complete cds Length = 5590 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gcggaggcggagctggagcagtgg 353 ||||||||||||||||||| |||| Sbjct: 2640 gcggaggcggagctggagctgtgg 2663
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctcacacacactcacgcaacacac 25 ||||||||||| |||||||||||| Sbjct: 26441 ctcacacacacacacgcaacacac 26418
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tgaaaagtgaaaaacagtgt 57 |||||||||||||||||||| Sbjct: 70085 tgaaaagtgaaaaacagtgt 70104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,093,062 Number of Sequences: 3902068 Number of extensions: 5093062 Number of successful extensions: 118333 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115512 Number of HSP's gapped (non-prelim): 2791 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
