Clone Name | bart37g08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104355.1| Zea mays PCO115514 mRNA sequence Length = 1053 Score = 391 bits (197), Expect = e-105 Identities = 317/357 (88%) Strand = Plus / Plus Query: 174 gcagccggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||||| || ||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 192 gcagcccgagttcgactacctcttcaagctactccttatcggcgactccggcgtcggcaa 251 Query: 234 gagcagtctcctcctccgattcacagcagactccttcgaggacctatcaccaaccatcgg 293 |||||| ||||||||||| ||||| || ||||||||||| ||||| || || ||||| || Sbjct: 252 gagcagcctcctcctccgcttcaccgccgactccttcgatgacctctcccctaccatagg 311 Query: 294 cgtcgacttcaaggtcaagatggttaacattgccggcaagaagctcaagctcgccgtctg 353 || ||||||||||| |||||||||| ||||| ||||| || |||||||| ||| |||| Sbjct: 312 tgttgacttcaaggtgaagatggttagcattggtggcaaaaaactcaagcttgccatctg 371 Query: 354 ggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcaca 413 |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ggacacagctggacaagagaggtttaggaccttgaccagctcttactacagaggggcaca 431 Query: 414 agggatcatcatggtgtacgatgttactcgccgagacacgttcacaaatctgtctgacat 473 |||||||| |||||||| ||||| | ||| ||||| |||||||| ||||| ||||| || Sbjct: 432 ggggatcattatggtgtatgatgtcagtcgacgagagacgttcaccaatctttctgatat 491 Query: 474 atgggccaaggaaattgacctgtattcgaccaaccaggactgcataaagatgcttgt 530 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 492 atgggccaaggaaattgacctgtattcaaccaaccaggactgtgtaaagatgcttgt 548
>dbj|AK111647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132F23, full insert sequence Length = 1059 Score = 301 bits (152), Expect = 1e-78 Identities = 305/356 (85%) Strand = Plus / Plus Query: 175 cagccggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| || || ||||| || ||||| ||||||||||||||||| |||||||||||| Sbjct: 185 cagccggattttgattacctctttaagctgctcctcatcggcgactcgggcgtcggcaag 244 Query: 235 agcagtctcctcctccgattcacagcagactccttcgaggacctatcaccaaccatcggc 294 ||||||||||||||||| ||||| | ||||| |||||||| || || || ||||| || Sbjct: 245 agcagtctcctcctccgcttcacctccgactctttcgaggatctctcgcccaccataggt 304 Query: 295 gtcgacttcaaggtcaagatggttaacattgccggcaagaagctcaagctcgccgtctgg 354 |||||||||||||||||||||||||||| | ||||| || |||||||| ||| ||||| Sbjct: 305 gtcgacttcaaggtcaagatggttaacaccggtggcaaaaaactcaagcttgccatctgg 364 Query: 355 gacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaa 414 ||||| ||||||||||| | ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 365 gacacagctggacaggagcgatttagaaccttgaccagctcatactacagaggtgcacag 424 Query: 415 gggatcatcatggtgtacgatgttactcgccgagacacgttcacaaatctgtctgacata 474 || || || |||||||||||||| ||||| || || || ||||| ||||| ||||||||| Sbjct: 425 ggtattattatggtgtacgatgtcactcgacgggaaacattcaccaatctttctgacata 484 Query: 475 tgggccaaggaaattgacctgtattcgaccaaccaggactgcataaagatgcttgt 530 ||||| |||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 485 tgggctaaggaaattgacctctattctacaaaccaggattgtattaagatgcttgt 540
>dbj|AK104720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A11, full insert sequence Length = 1059 Score = 287 bits (145), Expect = 2e-74 Identities = 305/357 (85%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 175 cagccggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| || || ||||| || ||||| ||||||||||||||||| |||||||||||| Sbjct: 184 cagccggattttgattacctctttaagctgctcctcatcggcgactcgggcgtcggcaag 243 Query: 235 agcagtctcctcctccgattcacagcagactccttcgaggacctatcaccaaccatcggc 294 ||||||||||||||||| ||||| | ||||| |||||||| || || || ||||| || Sbjct: 244 agcagtctcctcctccgcttcacctccgactctttcgaggatctctcgcccaccataggt 303 Query: 295 gtcgacttcaaggtcaagatggttaacattgccggcaagaag-ctcaagctcgccgtctg 353 |||||||||||||||||||||||||||| | ||||| || |||||||| ||| |||| Sbjct: 304 gtcgacttcaaggtcaagatggttaacaccggtggcaaaaaaactcaagcttgccatctg 363 Query: 354 ggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcaca 413 |||||| ||||||||||| | ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 364 ggacacagctggacaggagcgatttagaaccttgaccagctcatactacagaggtgcaca 423 Query: 414 agggatcatcatggtgtacgatgttactcgccgagacacgttcacaaatctgtctgacat 473 || || || |||||||||||||| ||||| || || || ||||| ||||| |||||||| Sbjct: 424 gggtattattatggtgtacgatgtcactcgacgggaaacattcaccaatctttctgacat 483 Query: 474 atgggccaaggaaattgacctgtattcgaccaaccaggactgcataaagatgcttgt 530 |||||| |||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 484 atgggctaaggaaattgacctctattctacaaaccaggattgtattaagatgcttgt 540
>emb|Z73936.1|LJRAB1Y L.japonicus mRNA for small GTP-binding protein, RAB1Y Length = 924 Score = 121 bits (61), Expect = 2e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 334 aagctcaagctcgccgtctgggacactgctggacaggaaaggtttaggaccttgaccagc 393 ||||| ||||||||| | ||||| |||||||| || || || ||||| || | || ||| Sbjct: 174 aagctgaagctcgccatttgggatactgctggccaagagagatttagaacacttacaagc 233 Query: 394 tcttactacagaggggcacaagggatcatcatggtgtacgatgttactcgccgagacacg 453 |||||||| |||||||||||||| ||||||||||| || ||||| || || ||||| || Sbjct: 234 tcttactatagaggggcacaaggaatcatcatggtttatgatgtaacccgacgagataca 293 Query: 454 ttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgaccaaccaggac 513 || |||||||| ||||| |||||||| |||||||| || || ||||| || || || ||| Sbjct: 294 tttacaaatctttctgaaatatgggcaaaggaaatagatctttattcaacaaatcaagac 353 Query: 514 tgcataaagatgcttgt 530 ||||| ||||||||||| Sbjct: 354 tgcatcaagatgcttgt 370
>ref|NM_103516.2| Arabidopsis thaliana ATRAB18; GTP binding AT1G43890 (ATRAB18) mRNA, complete cds Length = 990 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 397 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 456 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 457 atcaggattgcattaagatgcttgt 481
>gb|AY063080.1| Arabidopsis thaliana putative GTP-binding protein RAB1Y (At1g43890) mRNA, complete cds Length = 670 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 290 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 349 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 350 atcaggattgcattaagatgcttgt 374
>gb|AF370263.1| Arabidopsis thaliana putative GTP-binding protein RAB1Y (At1g43890) mRNA, complete cds Length = 864 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 361 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 420 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 421 atcaggattgcattaagatgcttgt 445
>gb|AY086878.1| Arabidopsis thaliana clone 2898 mRNA, complete sequence Length = 884 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 400 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 459 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 460 atcaggattgcattaagatgcttgt 484
>gb|AC022314.5|AC022314 Genomic sequence for Arabidopsis thaliana BAC F9C16 from chromosome I, complete sequence Length = 122543 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 8026 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 8085 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 8086 atcaggattgcattaagatgcttgt 8110
>gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28H19 genomic sequence, complete sequence Length = 131692 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 124262 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 124321 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 124322 atcaggattgcattaagatgcttgt 124346
>gb|U75603.1|ATU75603 Arabidopsis thaliana AtRab18 (AtRAB18) mRNA, complete cds Length = 700 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 446 gagacacgttcacaaatctgtctgacatatgggccaaggaaattgacctgtattcgacca 505 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||| | Sbjct: 309 gagacacgttcacaaacctatcagacatatgggctaaggaaatcgacctctattcgacta 368 Query: 506 accaggactgcataaagatgcttgt 530 | ||||| ||||| ||||||||||| Sbjct: 369 atcaggattgcattaagatgcttgt 393
>ref|NM_120433.2| Arabidopsis thaliana ATRAB ALPHA; GTP binding AT5G03530 (ATRAB ALPHA) mRNA, complete cds Length = 1181 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagagggg 409 |||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||| | Sbjct: 523 tctgggacacagctggacaggaacggtttagaacactgacaagctcttactacagaggcg 582 Query: 410 cacaagggatcat 422 | ||||| ||||| Sbjct: 583 cccaaggaatcat 595
>ref|NM_190607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 27 cgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaag 75
>ref|XM_475071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 190 tacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctcctc 249 |||||||||||||| |||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 19 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 78 Query: 250 cgatt 254 ||||| Sbjct: 79 cgatt 83
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 190 tacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctcctc 249 |||||||||||||| |||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 34659 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 34600 Query: 250 cgatt 254 ||||| Sbjct: 34599 cgatt 34595 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 29286 cgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaag 29334 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 55 ccgatccgatccg--gccggcgatcccttctcctc 87 ||||||||||||| |||||||| ||||||||||| Sbjct: 68484 ccgatccgatccgccgccggcgaacccttctcctc 68518
>gb|BT006101.1| Arabidopsis thaliana clone U51168 unknown protein (At5g03530) mRNA, complete cds Length = 664 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagagggg 409 |||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||| | Sbjct: 194 tctgggacacagctggacaggaacggtttagaacactgacaagctcttactacagaggcg 253 Query: 410 cacaagggatcat 422 | ||||| ||||| Sbjct: 254 cccaaggaatcat 266
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 190 tacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctcctc 249 |||||||||||||| |||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 259139 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 259080 Query: 250 cgatt 254 ||||| Sbjct: 259079 cgatt 259075 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 25426747 gactacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaag 25426694 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 253766 cgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaag 253814 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 179 cggacttcgactacctgttcaagctcctcctcatcgg 215 |||||| ||||||||| ||||||||||||||||||| Sbjct: 22506990 cggactacgactacctcatcaagctcctcctcatcgg 22506954 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 208 ctcatcggcgactccggcgtcggcaaga 235 ||||||||||| ||||||||||||||| Sbjct: 25606055 ctcatcggcgagcccggcgtcggcaaga 25606028 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 55 ccgatccgatccg--gccggcgatcccttctcctc 87 ||||||||||||| |||||||| ||||||||||| Sbjct: 292964 ccgatccgatccgccgccggcgaacccttctcctc 292998
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 36463493 cgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaag 36463445 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagc 237 |||||| |||| |||||| | ||||||||||||||||||||| Sbjct: 41375246 ttcaagatcctgctcatcagggactccggcgtcggcaagagc 41375205 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 31397206 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 31397259
>emb|BX834085.1|CNS0A0J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 795 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagagggg 409 |||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||| | Sbjct: 199 tctgggacacagctggacaggaacggtttagaacactgacaagctcttactacagaggcg 258 Query: 410 cacaagggatcat 422 | ||||| ||||| Sbjct: 259 cccaaggaatcat 271
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 115332 cgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaag 115284
>dbj|AK119027.1| Arabidopsis thaliana At5g03530 mRNA for putative AtRab GTP-binding protein, complete cds, clone: RAFL21-34-N24 Length = 1108 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagagggg 409 |||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||| | Sbjct: 523 tctgggacacagctggacaggaacggtttagaacactgacaagctcttactacagaggcg 582 Query: 410 cacaagggatcat 422 | ||||| ||||| Sbjct: 583 cccaaggaatcat 595
>dbj|AK071303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087L18, full insert sequence Length = 1131 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 209 cgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaag 257
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 190 tacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctcctc 249 |||||||||||||| |||||||||||||||||| |||||||||| | | ||||||||| Sbjct: 141323 tacctgttcaagctgctcctcatcggcgactcctccgtcggcaagtcctgcctcctcctc 141264 Query: 250 cgatt 254 ||||| Sbjct: 141263 cgatt 141259 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 135950 cgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaag 135998
>dbj|D89824.1| Arabidopsis thaliana AtRab mRNA for GTP-binding protein, complete cds Length = 882 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagagggg 409 |||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||| | Sbjct: 224 tctgggacacagctggacaggaacggtttagaacactgacaagctcttactacagaggcg 283 Query: 410 cacaagggatcat 422 | ||||| ||||| Sbjct: 284 cccaaggaatcat 296
>ref|NM_196819.1| Oryza sativa (japonica cultivar-group) putative GTP-binding protein (OSJNBa0018F16.14), mRNA Length = 669 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctc 246 |||||| |||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 58 ttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctc 108 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggca 411 ||||| |||||||| ||||| ||||||||||| | || || |||||||||||||| || Sbjct: 229 tgggatactgctggccaggagaggtttaggacaattactagttcttactacagaggtgct 288 Query: 412 caagg 416 ||||| Sbjct: 289 caagg 293
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctc 246 |||||| |||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 61989 ttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctc 61939 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 361 gctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagg 416 ||||| ||||| ||||||||||| | || || |||||||||||||| || ||||| Sbjct: 60028 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaagg 59973
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctc 246 |||||| |||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 16183100 ttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctc 16183050 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 361 gctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagg 416 ||||| ||||| ||||||||||| | || || |||||||||||||| || ||||| Sbjct: 16181139 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaagg 16181084
>dbj|AK102843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109P10, full insert sequence Length = 1101 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctc 246 |||||| |||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 240 ttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctc 290 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggca 411 ||||| |||||||| ||||| ||||||||||| | || || |||||||||||||| || Sbjct: 411 tgggatactgctggccaggagaggtttaggacaattactagttcttactacagaggtgct 470 Query: 412 caagg 416 ||||| Sbjct: 471 caagg 475
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtctcctc 246 |||||| |||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 16191341 ttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctc 16191291 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 361 gctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagg 416 ||||| ||||| ||||||||||| | || || |||||||||||||| || ||||| Sbjct: 16189380 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaagg 16189325
>ref|XM_475714.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 37 gactacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaag 90
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 67108 gactacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaag 67055
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 457 acaaatctgtctgacatatgggccaaggaaattgacctgtattcgaccaaccaggactgc 516 |||||||| ||||| |||||||| |||||||| ||||| ||||| || || || |||||| Sbjct: 45845 acaaatctctctgaaatatgggcaaaggaaatagacctttattcaacaaatcaagactgc 45904 Query: 517 ataaagatgcttgt 530 || ||||||||||| Sbjct: 45905 atgaagatgcttgt 45918 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 361 gctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagggatc 420 ||||| ||||| || ||||| || |||| || ||||||||||||||||| ||||| ||| Sbjct: 45038 gctggtcaggagagatttagaacactgacaagttcttactacagaggggctcaaggaatc 45097 Query: 421 atcatgg 427 ||||||| Sbjct: 45098 atcatgg 45104
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 20553717 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaag 20553664
>gb|AF327517.1|AF327517 Oryza sativa GTP-binding protein mRNA, complete cds Length = 1406 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 507 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaag 560
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 83 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaag 136
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 126012 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaag 125959
>dbj|AK066548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069H14, full insert sequence Length = 1006 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 118 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgtcggcaag 171
>dbj|AK061969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H05, full insert sequence Length = 968 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 89 gactacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaag 142
>dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H10, full insert sequence Length = 1344 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 80 gactacgactacctgttcaaggtggtgctcatcggcgactccggcgtcggcaag 133
>ref|NM_185154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 162 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 210
>ref|XM_475070.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 33 cgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaag 81
>ref|XM_329521.1| Neurospora crassa OR74A GTP-BINDING PROTEIN YPT1 (NCU08477.1) partial mRNA Length = 732 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 135 cgactacctcttcaagctcctcctcatcggtgactccggtgtcgg 179
>ref|XM_958053.1| Neurospora crassa OR74A GTP-BINDING PROTEIN YPT1 (NCU08477.1) partial mRNA Length = 732 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 135 cgactacctcttcaagctcctcctcatcggtgactccggtgtcgg 179
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 34292288 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 34292240 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 2535726 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 2535772 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 209 tcatcggcgactccggcgtcggcaagagc 237 ||||||| ||||||||||||||||||||| Sbjct: 17988682 tcatcggggactccggcgtcggcaagagc 17988654 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 35130471 cgactacctgttcaagatcgtgctgatcggggactccggcgt 35130430
>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10 Length = 66924 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 46431 cgactacctcttcaagctcctcctcatcggtgactccggtgtcgg 46475
>gb|S51252.1| Neurospora crassa NCYPT1 (Ncypt1) gene, complete cds Length = 3157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 1323 cgactacctcttcaagctcctcctcatcggtgactccggtgtcgg 1367
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 34382760 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 34382712 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 2535836 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 2535882 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 209 tcatcggcgactccggcgtcggcaagagc 237 ||||||| ||||||||||||||||||||| Sbjct: 17982223 tcatcggggactccggcgtcggcaagagc 17982195 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 35220543 cgactacctgttcaagatcgtgctgatcggggactccggcgt 35220502
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 42710 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 42758
>dbj|AK102713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104P17, full insert sequence Length = 874 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct: 122 cgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaag 170
>gb|BT023992.1| Zea mays clone EL01N0409D10 mRNA sequence Length = 1150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 151 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 199
>dbj|AK067508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L21, full insert sequence Length = 3009 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 162 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 210
>dbj|AK061336.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B12, full insert sequence Length = 1217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 161 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 209
>gb|AY110333.1| Zea mays CL8515_1 mRNA sequence Length = 1118 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 974 cgactacctcttcaagatcgtgctcatcggcgactccggcgtcggcaag 926
>ref|NM_153317.1| Rattus norvegicus RAB8B, member RAS oncogene family (Rab8b), mRNA Length = 740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 88 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 130
>ref|NM_173413.2| Mus musculus RAB8B, member RAS oncogene family (Rab8b), mRNA Length = 4749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 76 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 118
>gb|BC059208.1| Mus musculus RAB8B, member RAS oncogene family, mRNA (cDNA clone MGC:66509 IMAGE:6405462), complete cds Length = 4749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 76 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 118
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 49741 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 49699
>ref|XM_980344.1| PREDICTED: Mus musculus similar to RAB8B, member RAS oncogene family (LOC670268), mRNA Length = 3161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 94 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 136
>emb|AJ277108.1|TRE277108 Trichoderma reesei ypt1 gene for small GTP-binding protein YPTI, exons 1-5 Length = 2351 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccgg 224 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 955 cgactacctcttcaagctcctcctcatcggtgactccgg 993
>dbj|AK155621.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730038O22 product:RAB8B, member RAS oncogene family, full insert sequence Length = 2921 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 44 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 86
>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence Length = 185878 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 138507 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 138465
>dbj|AK084650.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025I23 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 3517 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 44 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 86
>dbj|AK051218.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130018D01 product:RAB8-LIKE (FRAGMENT) homolog [Caenorhabditis elegans], full insert sequence Length = 1981 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 44 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 86
>gb|DQ218231.1| Gibberella moniliformis putative GTP-binding protein-like mRNA, partial sequence Length = 462 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccgg 224 ||||||||| |||||||||||||||||||| |||||||| Sbjct: 275 cgactacctcttcaagctcctcctcatcggagactccgg 313
>gb|U53475.1|RNU53475 Rattus norvegicus GTPase Rab8b (Rab8b) mRNA, complete cds Length = 740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 88 ctgttcaagctgctgctcatcggcgactccggcgttggcaaga 130
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 361 gctggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagggatc 420 |||||||||||| ||||||| || |||| ||||||||||||||||| || ||||| ||| Sbjct: 100238 gctggacaggaacggtttagaacactgacaagctcttactacagaggcgcccaaggaatc 100179 Query: 421 at 422 || Sbjct: 100178 at 100177
>ref|XM_450547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||| |||||||||||||||| | | ||||||||||||||||| |||||||| Sbjct: 147 gactacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaa 199
>ref|XM_370465.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06962.4) partial mRNA Length = 609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 |||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 15 cgactatctgttcaagctcctccttatcggagactccggtgtcgg 59
>gb|AF454544.1| Pichia angusta strain DL-1 GTP-binding protein (YPT1) and phosphomannose isomerase (PMI40) genes, complete cds; and unknown genes Length = 6000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||||| || || ||||||||||||||||| |||||| Sbjct: 1590 cgactaccttttcaagctgctgcttatcggcgactccggcgtgggcaag 1542
>gb|DQ222936.1| Chlamydomonas incerta YptC1 (yptC1) mRNA, complete cds Length = 681 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 55 cgactacctgttcaagcttctgctcattggcgactccggtgttggcaag 103
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||| |||||||||||||||| | | ||||||||||||||||| |||||||| Sbjct: 9592797 gactacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaa 9592745
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||| |||||||||||||||| | | ||||||||||||||||| |||||||| Sbjct: 32894 gactacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaa 32842
>dbj|AK071461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092H24, full insert sequence Length = 1200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||| |||||||||||||||| | | ||||||||||||||||| |||||||| Sbjct: 147 gactacgactacctgttcaaggtggtgctcatcggcgactccggggtcggcaa 199
>dbj|AK060839.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D03, full insert sequence Length = 1351 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 190 tacctgttcaagctcctcctcatcggcgactcc 222 |||||||||||||| |||||||||||||||||| Sbjct: 453 tacctgttcaagctgctcctcatcggcgactcc 485
>gb|AY110109.1| Zea mays CL16448_2 mRNA sequence Length = 958 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||| ||||||||| |||||| || | || ||||||||||||||||||||||| Sbjct: 94 gactacgactacctcttcaaggtcgttcttatcggcgactccggcgtcggcaa 146
>gb|AF346820.1| Pichia angusta GTP-binding protein (YPT1) gene, complete cds Length = 1680 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||| |||||||| || || ||||||||||||||||| |||||| Sbjct: 627 cgactaccttttcaagctgctgcttatcggcgactccggcgtgggcaag 675
>dbj|AK031251.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930437D16 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 2590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 |||||||| || |||||||||||||||||||| ||||||| Sbjct: 44 ttcaagctgctgctcatcggcgactccggcgttggcaaga 83
>ref|XM_470212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 633 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 37 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 83 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttagg 381 |||||||||||||| ||||||||||||||| Sbjct: 199 tgggacactgctggccaggaaaggtttagg 228
>ref|XM_506215.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.15 mRNA Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 138 gacttcgaccacctcatcaagctcctcctcatcggcgac 176
>ref|XM_476979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 138 gacttcgaccacctcatcaagctcctcctcatcggcgac 176
>emb|Z73935.1|LJRAB1X L.japonicus mRNA for small GTP-binding protein, RAB1X Length = 1137 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggca 411 |||||||| || |||||||||||||| ||||| | ||||| |||||||| ||||| || Sbjct: 300 tgggacacagcgggacaggaaaggttcaggactctaaccagttcttactatagaggagcg 359 Query: 412 caagggatcat 422 ||||| ||||| Sbjct: 360 caaggaatcat 370
>emb|BX052472.1|CNS09CNG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1001 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 570 tctgggacactgctggacaggaaaggt 596
>emb|BX032716.1|CNS08XEO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 336 tctgggacactgctggacaggaaaggt 362
>emb|BX028733.1|CNS08UC1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 507 tctgggacactgctggacaggaaaggt 533
>emb|BX020822.1|CNS08O8A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 516 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 206 tctgggacactgctggacaggaaaggt 232
>emb|X63277.1|ZMYPTM1 Z.mays yptm1 cDNA Length = 996 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 184 ttcgactacctgttcaagctcctcctcatcggcgactcc 222 ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 205 ttcgattacctgttcaagcttctcctgatcggcgactcc 243
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 134368 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 134322
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 5180691 gacttcgaccacctcatcaagctcctcctcatcggcgac 5180653
>dbj|D17779.1|RICSS23015 Oryza sativa SS230 mRNA for ras-related GTP-binding protein, partial sequence Length = 312 Score = 54.0 bits (27), Expect = 5e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcg-tcggcaag 234 |||| ||||||||| |||||| | ||||||||||||||||||||| |||||||| Sbjct: 83 gactacgactacctcttcaaggtggtcctcatcggcgactccggcgatcggcaag 137
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 47405 gacttcgaccacctcatcaagctcctcctcatcggcgac 47367
>dbj|AK111552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052A20, full insert sequence Length = 1195 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 206 gacttcgaccacctcatcaagctcctcctcatcggcgac 244
>ref|XM_555603.1| Anopheles gambiae str. PEST ENSANGP00000027173 (ENSANGG00000007604), partial mRNA Length = 513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 326 tctgggacactgctggacaggaaaggt 352
>ref|XM_317586.2| Anopheles gambiae str. PEST ENSANGP00000023894 (ENSANGG00000007604), partial mRNA Length = 513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 326 tctgggacactgctggacaggaaaggt 352
>ref|XM_317587.2| Anopheles gambiae str. PEST ENSANGP00000023388 (ENSANGG00000007604), partial mRNA Length = 890 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 481 tctgggacactgctggacaggaaaggt 507
>ref|XM_317584.2| Anopheles gambiae str. PEST ENSANGP00000022645 (ENSANGG00000007604), partial mRNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 507 tctgggacactgctggacaggaaaggt 533
>ref|XM_317588.2| Anopheles gambiae str. PEST ENSANGP00000010093 (ENSANGG00000007604), partial mRNA Length = 966 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 557 tctgggacactgctggacaggaaaggt 583
>ref|XM_317585.2| Anopheles gambiae str. PEST ENSANGP00000022624 (ENSANGG00000007604), partial mRNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||||||||||||||||||||||| Sbjct: 507 tctgggacactgctggacaggaaaggt 533
>dbj|AK104473.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E03, full insert sequence Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 138 gacttcgaccacctcatcaagctcctcctcatcggcgac 176
>dbj|AK104346.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F04, full insert sequence Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgac 219 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 138 gacttcgaccacctcatcaagctcctcctcatcggcgac 176
>dbj|AK099130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043D11, full insert sequence Length = 1002 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 153 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 199 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttagg 381 |||||||||||||| ||||||| ||||||| Sbjct: 315 tgggacactgctggccaggaaaagtttagg 344
>dbj|AK061250.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F09, full insert sequence Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagcagtct 242 |||||| |||| |||||||| ||||| | |||||||||||||||||| Sbjct: 161 ttcaagatcctgctcatcggggactcggccgtcggcaagagcagtct 207 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttagg 381 |||||||||||||| ||||||||||||||| Sbjct: 323 tgggacactgctggccaggaaaggtttagg 352
>gb|AY109984.1| Zea mays CL2070_1 mRNA sequence Length = 994 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 184 ttcgactacctgttcaagctcctcctcatcggcgactcc 222 ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 205 ttcgattacctgttcaagcttctcctgatcggcgactcc 243
>gb|AY104866.1| Zea mays PCO122462 mRNA sequence Length = 1057 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccgg 224 ||||||||| |||||||| ||||||||||| |||||||| Sbjct: 214 cgactacctcttcaagctgctcctcatcggggactccgg 252
>ref|XM_475372.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 179 cggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagag 236 |||||| ||||||||| ||||||||||||||||||| ||| ||| || |||||||| Sbjct: 29 cggactacgactacctcatcaagctcctcctcatcggggacagcggtgttggcaagag 86
>ref|NM_001031504.1| Gallus gallus RAB8A, member RAS oncogene family (RAB8A), mRNA Length = 5888 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1337 cgactatctgttcaagctgctgctcatcggcgactcgggcgt 1378
>ref|NM_191227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 40 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 93
>gb|AY327044.1| Oryza sativa (japonica cultivar-group) GTP-binding protein GTP1 mRNA, complete cds Length = 960 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 118 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 171
>emb|AJ851430.1| Gallus gallus mRNA for hypothetical protein, clone 2k8 Length = 5888 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1337 cgactatctgttcaagctgctgctcatcggcgactcgggcgt 1378
>emb|BX930100.2| Gallus gallus finished cDNA, clone ChEST1021d13 Length = 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 21 cgactatctgttcaagctgctgctcatcggcgactcgggcgt 62
>emb|BX931166.1| Gallus gallus finished cDNA, clone ChEST1022e3 Length = 983 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 22 cgactatctgttcaagctgctgctcatcggcgactcgggcgt 63
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaagagc 237 |||||| |||| |||||| | ||||||||||||||||||||| Sbjct: 66739 ttcaagatcctgctcatcagggactccggcgtcggcaagagc 66698
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 151489 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 151542
>emb|BX932054.1| Gallus gallus finished cDNA, clone ChEST417i18 Length = 928 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 391 cgactatctgttcaagctgctgctcatcggcgactcgggcgt 350
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 |||||||||||||| ||||||||||||||| Sbjct: 8634698 tcctcatcggcgaccccggcgtcggcaaga 8634727 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cggcgtcgacttcaaggtca 310 |||||||||||||||||||| Sbjct: 2421471 cggcgtcgacttcaaggtca 2421452
>dbj|AK112021.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H04, full insert sequence Length = 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 179 cggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagag 236 |||||| ||||||||| ||||||||||||||||||| ||| ||| || |||||||| Sbjct: 192 cggactacgactacctcatcaagctcctcctcatcggggacagcggtgttggcaagag 249
>dbj|AK111972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F01, full insert sequence Length = 1133 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 179 cggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagag 236 |||||| ||||||||| ||||||||||||||||||| ||| ||| || |||||||| Sbjct: 198 cggactacgactacctcatcaagctcctcctcatcggggacagcggtgttggcaagag 255
>dbj|AK111917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H16, full insert sequence Length = 1220 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 179 cggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagag 236 |||||| ||||||||| ||||||||||||||||||| ||| ||| || |||||||| Sbjct: 276 cggactacgactacctcatcaagctcctcctcatcggggacagcggtgttggcaagag 333
>emb|AJ234567.1|HVU234567 Hordeum vulgare genomic DNA fragment; clone MWG0812 Length = 1096 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 209 tcatcggcgactccggcgtcggcaag 234 |||||||||||||||||||||||||| Sbjct: 299 tcatcggcgactccggcgtcggcaag 324
>dbj|AK066450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061B07, full insert sequence Length = 3356 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 154 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 207
>dbj|AK060095.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F01, full insert sequence Length = 1005 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 112 gactacgactacctgttcaagacggtgctcatcggcgactccggcgtgggcaag 165
>ref|XM_509422.1| PREDICTED: Pan troglodytes similar to RAB35, member RAS oncogene family (LOC452300), mRNA Length = 1433 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 780 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 839 Query: 240 t 240 | Sbjct: 840 t 840
>gb|BT020024.1| Homo sapiens RAB35, member RAS oncogene family mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|BT020023.1| Synthetic construct Homo sapiens RAB35, member RAS oncogene family mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|BT020020.1| Synthetic construct Homo sapiens RAB35, member RAS oncogene family mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|BC015931.2| Homo sapiens RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:8924 IMAGE:3907209), complete cds Length = 2875 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 113 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 172 Query: 240 t 240 | Sbjct: 173 t 173
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 179 cggacttcgactacctgttcaagctcctcctcatcgg 215 |||||| ||||||||| ||||||||||||||||||| Sbjct: 2040 cggactacgactacctcatcaagctcctcctcatcgg 2004
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 179 cggacttcgactacctgttcaagctcctcctcatcgg 215 |||||| ||||||||| ||||||||||||||||||| Sbjct: 96397 cggactacgactacctcatcaagctcctcctcatcgg 96361
>ref|NM_006861.4| Homo sapiens RAB35, member RAS oncogene family (RAB35), mRNA Length = 2931 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 154 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 213 Query: 240 t 240 | Sbjct: 214 t 214
>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete sequence Length = 131589 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 209 tcatcggcgactccggcgtcggcaagagc 237 ||||||| ||||||||||||||||||||| Sbjct: 127519 tcatcggggactccggcgtcggcaagagc 127547
>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete sequence Length = 142896 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 209 tcatcggcgactccggcgtcggcaagagc 237 ||||||| ||||||||||||||||||||| Sbjct: 33610 tcatcggggactccggcgtcggcaagagc 33638
>gb|AF101310.3| Caenorhabditis elegans cosmid C39F7, complete sequence Length = 46226 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| ||||| |||||||||||||| || || |||||||| Sbjct: 40002 cgactacctcttcaaactcctcctcatcggagattctggcgtcgg 39958
>emb|BX039831.1|CNS092WB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10BC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 619 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaag 374 ||||||||||||||||||||||||| Sbjct: 504 tctgggacactgctggacaggaaag 528
>emb|X79781.1|HSRAY1 H.sapiens ray mRNA Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 90 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 149 Query: 240 t 240 | Sbjct: 150 t 150
>gb|AF498960.1| Homo sapiens small GTP binding protein RAB35 (RAB35) mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>ref|XM_695953.1| PREDICTED: Danio rerio similar to RAS and EF hand domain containing (LOC572256), mRNA Length = 2305 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaag 374 ||||||||||||||||||||||||| Sbjct: 1502 tctgggacactgctggacaggaaag 1526
>emb|CR541683.1| Homo sapiens full open reading frame cDNA clone RZPDo834D0628D for gene RAB35, RAB35, member RAS oncogene family; complete cds, without stopcodon Length = 603 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>emb|CR536486.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0817D for gene RAB35, RAB35, member RAS oncogene family; complete cds, incl. stopcodon Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY007366.1| Lycopersicon esculentum tospovirus resistance protein A (Sw5-a) and tospovirus resistance protein B (Sw5-b) genes, complete cds Length = 35250 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 tgggacactgctggacaggaaaggtttag 380 ||||| ||||||||||||||||||||||| Sbjct: 8524 tgggatactgctggacaggaaaggtttag 8496
>ref|NM_070996.3| Caenorhabditis elegans RAB family member (rab-1) (rab-1) mRNA, complete cds Length = 1098 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| ||||| |||||||||||||| || || |||||||| Sbjct: 59 cgactacctcttcaaactcctcctcatcggagattctggcgtcgg 103
>gb|AY891619.1| Synthetic construct Homo sapiens clone FLH016902.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY889038.1| Synthetic construct Homo sapiens clone FLH016904.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY890371.1| Synthetic construct Homo sapiens clone FLH018674.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY888268.1| Synthetic construct Homo sapiens clone FLH021046.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY890856.1| Synthetic construct Homo sapiens clone FLH021043.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY890855.1| Synthetic construct Homo sapiens clone FLH021042.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY893877.1| Synthetic construct Homo sapiens clone FLH127896.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY893660.1| Synthetic construct Homo sapiens clone FLH131037.01L RAB35 member RAS oncogene family (RAB35) mRNA, partial cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>gb|AY893429.1| Synthetic construct Homo sapiens clone FLH127816.01X RAB35 member RAS oncogene family (RAB35) mRNA, complete cds Length = 606 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 9 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 68 Query: 240 t 240 | Sbjct: 69 t 69
>dbj|AK062838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H02, full insert sequence Length = 949 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 97 cgactaccttttcaagctcctgcttatcggtgactcgggcgtcgg 141
>gb|AY103999.1| Zea mays PCO068021 mRNA sequence Length = 903 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaag 234 |||| |||||||||||||||||||||||| Sbjct: 121 tcctgatcggcgactccggcgtcggcaag 149
>gb|U68251.1|CEU68251 Caenorhabditis elegans rab1-like mRNA, partial cds Length = 269 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 ||||||||| ||||| |||||||||||||| || || |||||||| Sbjct: 87 cgactacctcttcaaactcctcctcatcggagattctggcgtcgg 131
>gb|BC056466.1| Mus musculus RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:67236 IMAGE:5717246), complete cds Length = 2181 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 169 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 228
>gb|BC074238.1| Xenopus laevis MGC83971 protein, mRNA (cDNA clone MGC:83971 IMAGE:6945226), complete cds Length = 1652 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtt 377 |||||||||||||||| ||||||||||| Sbjct: 336 tctgggacactgctggccaggaaaggtt 363
>gb|BC060015.1| Xenopus laevis hypothetical protein MGC68629, mRNA (cDNA clone MGC:68629 IMAGE:4032253), complete cds Length = 1356 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 196 ttcaagctcctcctcatcggcgactccggcgtcggcaaga 235 |||||||| || || |||||||||||||| |||||||||| Sbjct: 244 ttcaagctgctgctgatcggcgactccggggtcggcaaga 283
>ref|XM_386385.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06209.1) partial mRNA Length = 612 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 199 aagctcctcctcatcggcgactccggcgtcggcaag 234 ||||| ||||| || ||||||||||||||||||||| Sbjct: 34 aagctgctcctgataggcgactccggcgtcggcaag 69
>gb|DQ179053.1| Phytophthora alni subsp. multiformis isolate PAM54 clone b7 RAS-related protein gene, partial sequence Length = 638 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>ref|NM_001007969.1| Xenopus tropicalis RAB27A, member RAS oncogene family (rab27a), mRNA Length = 1927 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtt 377 |||||||||||||||| ||||||||||| Sbjct: 366 tctgggacactgctgggcaggaaaggtt 393
>gb|BC080481.1| Xenopus tropicalis RAB27A, member RAS oncogene family, mRNA (cDNA clone MGC:89827 IMAGE:7028556), complete cds Length = 1927 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtt 377 |||||||||||||||| ||||||||||| Sbjct: 366 tctgggacactgctgggcaggaaaggtt 393
>dbj|AK156576.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031E13 product:Ras-related protein Rab-35 (Rab-1C) (GTP-binding protein RAY) homolog [Homo sapiens], full insert sequence Length = 2153 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 160 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 219
>gb|DQ093990.1| Phytophthora cambivora isolate PCJC17 clone c1 RAS-related protein gene, partial sequence Length = 636 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|DQ093988.1| Phytophthora cambivora isolate PC643 clone g1 RAS-related protein gene, partial sequence Length = 640 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|DQ093986.1| Phytophthora fragariae var. rubi isolate PFR109 clone h1 RAS-related protein gene, partial sequence Length = 647 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 81 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 128
>gb|DQ093985.1| Phytophthora fragariae var. fragariae isolate PFF309 clone h1 RAS-related protein gene, partial sequence Length = 647 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 81 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 128
>gb|DQ093983.1| Phytophthora alni subsp. alni isolate PAA162 clone a2 RAS-related protein gene, partial sequence Length = 638 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|DQ093978.1| Phytophthora alni subsp. alni isolate PAA143 clone b1 RAS-related protein gene, partial sequence Length = 638 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|DQ093977.1| Phytophthora alni subsp. alni isolate PAA130 clone h1 RAS-related protein gene, partial sequence Length = 638 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|DQ093969.1| Phytophthora alni subsp. multiformis isolate PAM73 clone b1 RAS-related protein gene, partial sequence Length = 586 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 20 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 67
>gb|DQ093967.1| Phytophthora alni subsp. multiformis isolate PAM71 clone b1 RAS-related protein gene, partial sequence Length = 638 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 |||||||| |||||||| || || ||||| ||||| |||||||||||| Sbjct: 72 gactaccttttcaagctgctgctgatcggtgactcaggcgtcggcaag 119
>gb|AC151314.2| Xenopus tropicalis clone ISB-195A7, complete sequence Length = 108847 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 350 tctgggacactgctggacaggaaaggtt 377 ||||||||||||||||||||||| |||| Sbjct: 80182 tctgggacactgctggacaggaacggtt 80155
>gb|AC092232.1|AC092232 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone BACR28K16, complete sequence Length = 182897 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tgcgatccgatccgatccggccggcgat 76 |||||| ||||||||||||||||||||| Sbjct: 141559 tgcgatgcgatccgatccggccggcgat 141586
>ref|XM_573408.1| PREDICTED: Rattus norvegicus similar to RAB35, member RAS oncogene family (LOC498191), mRNA Length = 2117 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 141 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 200
>gb|AY110905.1| Zea mays CL34283_1 mRNA sequence Length = 990 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaa 233 |||||| || |||||||| |||||||||||||| ||| ||||||||| Sbjct: 88 cgactatctcttcaagctgctcctcatcggcgattcctccgtcggcaa 135
>gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15 of 83 of the complete sequence Length = 289893 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tgcgatccgatccgatccggccggcgat 76 |||||| ||||||||||||||||||||| Sbjct: 66108 tgcgatgcgatccgatccggccggcgat 66081
>emb|CR760249.2| Xenopus tropicalis finished cDNA, clone TNeu020e07 Length = 770 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtt 377 |||||||||||||||| ||||||||||| Sbjct: 253 tctgggacactgctgggcaggaaaggtt 280
>gb|BC085769.1| Rattus norvegicus RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:93682 IMAGE:7135343), complete cds Length = 2151 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 113 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 172
>gb|BC082420.1| Xenopus laevis hypothetical LOC494641, mRNA (cDNA clone MGC:83279 IMAGE:6863014), complete cds Length = 2911 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtt 377 |||||||||||||||| ||||||||||| Sbjct: 246 tctgggacactgctgggcaggaaaggtt 273
>ref|NM_001013046.1| Rattus norvegicus RAB35, member RAS oncogene family (Rab35), mRNA Length = 2151 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 113 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 172
>gb|AC004373.1|AC004373 Drosophila melanogaster DNA sequence (P1 DS05273 (D80)), complete sequence Length = 72722 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tgcgatccgatccgatccggccggcgat 76 |||||| ||||||||||||||||||||| Sbjct: 12320 tgcgatgcgatccgatccggccggcgat 12293
>gb|AC005270.1|AC005270 Drosophila melanogaster DNA sequence (P1s DS00830 (D77) and DS04830 (D98)), complete sequence Length = 132666 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tgcgatccgatccgatccggccggcgat 76 |||||| ||||||||||||||||||||| Sbjct: 129475 tgcgatgcgatccgatccggccggcgat 129448
>ref|NM_198163.1| Mus musculus RAB35, member RAS oncogene family (Rab35), mRNA Length = 2181 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 ggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 ||||| |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 169 ggactacgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 228
>gb|AY439776.1| Armigeres subalbatus ASAP ID: 40009 RAS-related small monomeric GTPase mRNA sequence Length = 844 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaa 372 ||||||||||||||||||||||| Sbjct: 601 tctgggacactgctggacaggaa 623
>ref|NM_201142.1| Danio rerio zgc:56049 (zgc:56049), mRNA Length = 2982 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactc 221 ||||||||||||||| | ||||||||||| ||||| Sbjct: 288 gactacctgttcaagttgctcctcatcggtgactc 322
>gb|BC047816.1| Danio rerio zgc:56049, mRNA (cDNA clone MGC:56049 IMAGE:3820257), complete cds Length = 2982 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactc 221 ||||||||||||||| | ||||||||||| ||||| Sbjct: 288 gactacctgttcaagttgctcctcatcggtgactc 322
>ref|XM_716457.1| Candida albicans SC5314 putative RAB family GTP binding protein involved in secretion (CaO19_3052), mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttag 380 |||||||||||||||| || ||||||||||| Sbjct: 182 tctgggacactgctggtcaagaaaggtttag 212
>ref|XM_716186.1| Candida albicans SC5314 putative RAB family GTP binding protein involved in secretion (CaO19_10570), mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttag 380 |||||||||||||||| || ||||||||||| Sbjct: 182 tctgggacactgctggtcaagaaaggtttag 212
>gb|BC063736.1| Xenopus laevis hypothetical protein MGC68722, mRNA (cDNA clone MGC:68722 IMAGE:4057038), complete cds Length = 2348 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 205 ctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| |||||||| |||||||||| Sbjct: 171 ctcctcatcggggactccggggtcggcaaga 201
>ref|XM_984989.1| PREDICTED: Mus musculus RIKEN cDNA 1700009N14 gene (1700009N14Rik), mRNA Length = 1264 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 465 cgtctgggacactgctggccaggaaaagttt 495
>ref|XM_912277.2| PREDICTED: Mus musculus RIKEN cDNA 1700009N14 gene (1700009N14Rik), mRNA Length = 1264 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 465 cgtctgggacactgctggccaggaaaagttt 495
>ref|XM_131323.6| PREDICTED: Mus musculus RIKEN cDNA 1700009N14 gene (1700009N14Rik), mRNA Length = 1264 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 465 cgtctgggacactgctggccaggaaaagttt 495
>ref|XM_391049.1| Gibberella zeae PH-1 chromosome 3 YPT1_NEUCR GTP-binding protein ypt1 (FG10873.1) partial mRNA Length = 609 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccgg 224 |||||| || |||||||||||||||||||| || ||||| Sbjct: 15 cgactatctcttcaagctcctcctcatcggagattccgg 53
>emb|BX052473.1|CNS09CNH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||| ||||||||||||||||||| Sbjct: 710 tctgggaaactgctggacaggaaaggt 684
>emb|BX028734.1|CNS08UC2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 756 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 350 tctgggacactgctggacaggaaaggt 376 ||||||| ||||||||||||||||||| Sbjct: 705 tctgggaaactgctggacaggaaaggt 679
>emb|Z83760.1|CICOS41 Ciona intestinalis DNA sequence from cosmid COS41 Length = 35694 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttagga 382 ||||||||||| || |||||||||||||||| Sbjct: 3484 tgggacactgcagggcaggaaaggtttagga 3514
>emb|Z29592.1|VFGNRPR3 V.faba mRNA for guanine nucleotide regulatory protein (807bp) Length = 807 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 atcggcgactccggcgtcggcaa 233 ||||||||||||||||||||||| Sbjct: 106 atcggcgactccggcgtcggcaa 128
>ref|NM_001016372.2| Xenopus tropicalis RAB15, member RAS onocogene family (rab15), mRNA Length = 2620 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 205 ctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| |||||||||||||| |||| Sbjct: 116 ctcctcatcggggactccggcgtcgggaaga 146
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 350 tctgggacactgctggacaggaaaggtttag 380 ||||||||||||| || |||||||||||||| Sbjct: 210651 tctgggacactgcagggcaggaaaggtttag 210621
>ref|XM_697369.1| PREDICTED: Danio rerio hypothetical protein LOC555127 (LOC555127), mRNA Length = 2689 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 187 gactacctgttcaagctcctcctcatcggcgactc 221 ||||||||||||||| | ||||||||||| ||||| Sbjct: 2 gactacctgttcaagttgctcctcatcggtgactc 36
>ref|XM_679613.1| PREDICTED: Danio rerio similar to RAB35, member RAS oncogene family (predicted) (LOC556738), mRNA Length = 934 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttag 380 ||||||||||||| || |||||||||||||| Sbjct: 238 tctgggacactgcagggcaggaaaggtttag 268
>gb|AF330211.1|AF330211 Candida albicans small GTP-binding protein Ypt1p (YPT1) gene, complete cds Length = 1250 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggtttag 380 |||||||||||||||| || ||||||||||| Sbjct: 666 tctgggacactgctggtcaagaaaggtttag 696
>dbj|AK005799.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700009N14 product:GTP-BINDING NUCLEAR PROTEIN RAN (TC4) (RAN GTPASE) (ANDROGEN RECEPTOR- ASSOCIATED PROTEIN 24) homolog [Mus musculus], full insert sequence Length = 1265 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 468 cgtctgggacactgctggccaggaaaagttt 498
>dbj|AK173374.1| Ciona intestinalis cDNA, clone:cicl024b02, full insert sequence Length = 1768 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttagga 382 ||||||||||| || |||||||||||||||| Sbjct: 360 tgggacactgcagggcaggaaaggtttagga 390
>ref|XM_311197.1| Anopheles gambiae str. PEST ENSANGP00000019091 (ENSANGG00000016602), partial mRNA Length = 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 ctgttcaagctcctcctcatcggcgactccggcgt 227 ||||||||||| || || ||||||||||||||||| Sbjct: 25 ctgttcaagctgctgctgatcggcgactccggcgt 59
>gb|BT024015.1| Zea mays clone EL01N0311D12 mRNA sequence Length = 1605 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggttt 378 |||||||||||||| |||||||||||| Sbjct: 883 tgggacactgctggtcaggaaaggttt 909
>gb|AY109438.1| Zea mays CL8348_1 mRNA sequence Length = 1232 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 tgggacactgctggacaggaaaggttt 378 |||||||||||||| |||||||||||| Sbjct: 970 tgggacactgctggtcaggaaaggttt 944
>emb|CR761272.2| Xenopus tropicalis finished cDNA, clone TEgg119f07 Length = 2620 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 205 ctcctcatcggcgactccggcgtcggcaaga 235 ||||||||||| |||||||||||||| |||| Sbjct: 116 ctcctcatcggggactccggcgtcgggaaga 146
>emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 in linkage group 3, complete sequence Length = 196857 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 350 tctgggacactgctggacaggaaaggtttag 380 ||||||||||||| || |||||||||||||| Sbjct: 92851 tctgggacactgcagggcaggaaaggtttag 92821
>gb|BC082086.1| Rattus norvegicus similar to RAN protein, mRNA (cDNA clone MGC:95264 IMAGE:7133820), complete cds Length = 1176 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 357 cgtctgggacactgctggccaggaaaagttt 387
>ref|NM_001014062.1| Rattus norvegicus similar to RAN protein (RGD1306195), mRNA Length = 1176 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 357 cgtctgggacactgctggccaggaaaagttt 387
>gb|BC050973.1| Mus musculus cDNA clone IMAGE:6773859 Length = 1160 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 241 cgtctgggacactgctggccaggaaaagttt 271
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 364 ggacaggaaaggtttaggaccttgaccagctcttactacagaggggcacaagggatcat 422 |||||||||||||| ||||| | ||||| |||||||| ||||| || ||||| ||||| Sbjct: 28464 ggacaggaaaggttcaggactctaaccagttcttactatagaggagcgcaaggaatcat 28406
>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete sequence Length = 221319 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgtctgggacactgctggacaggaaaggttt 378 |||||||||||||||||| ||||||| |||| Sbjct: 59550 cgtctgggacactgctggccaggaaaagttt 59580
>gb|M93438.1|VVCYPTV Volvox carteri small G-protein (yptV1) gene, complete cds Length = 3711 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 ctcatcggcgactccggcgtcggcaag 234 |||||||||||||||||||| |||||| Sbjct: 1787 ctcatcggcgactccggcgtgggcaag 1813
>gb|U00986.1|U00986 Aplysia californica Rab3 mRNA, complete cds Length = 937 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 182 acttcgactacctgttcaagctcctcctcatcggc 216 ||||||||||| |||||||||| ||| |||||||| Sbjct: 185 acttcgactacatgttcaagctgctcatcatcggc 219
>ref|NM_001030669.1| Gallus gallus RAB35, member RAS oncogene family (RAB35), mRNA Length = 3203 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 106 cgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 159
>ref|XM_470373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 910 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 232 cgactacctgttcaagatcgtgctgatcggggactccggcgt 273
>gb|BT017614.1| Zea mays clone EL01N0433D01.c mRNA sequence Length = 1229 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 189 ctacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||||||| | |||||||||| ||| ||||||||||||| Sbjct: 272 ctacctgttcaagatggtcctcatcggagacagcggcgtcggcaag 317
>gb|AY690483.1| Triticum aestivum rab GTP-binding protein mRNA, complete cds Length = 1280 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcgg 230 |||| ||||||||| |||||| | | |||||||||||||| |||||||| Sbjct: 267 gactacgactacctcttcaaggtggtgctcatcggcgactcgggcgtcgg 316
>gb|BC053195.1| Danio rerio RAB13, member RAS oncogene family, mRNA (cDNA clone MGC:64010 IMAGE:6792909), complete cds Length = 1726 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 349 gtctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggg 408 ||||||||||| || |||||||| ||||||| |||| | |||| | |||||||||||| Sbjct: 575 gtctgggacacagcaggacaggagaggtttaagaccatcaccactgcatactacagaggg 634 Query: 409 gc 410 || Sbjct: 635 gc 636
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Minus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 9232 cgactacctgttcaagatcgtgctgatcggggactccggcgt 9191
>emb|CR932630.1|CNS0KYCQ Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtt 377 ||||||||||||||| |||||||||| Sbjct: 1473 tgggacactgctggataggaaaggtt 1498
>ref|XM_970132.1| PREDICTED: Tribolium castaneum similar to CG17060-PA (LOC664117), mRNA Length = 1154 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtt 377 |||||||| ||||||||||||||||| Sbjct: 193 tgggacacagctggacaggaaaggtt 218
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 ||||||||||||| ||||||||||||||| Sbjct: 124487 tcctcatcggcgagcccggcgtcggcaaga 124458
>emb|AJ851375.1| Gallus gallus mRNA for hypothetical protein, clone 1b12 Length = 3203 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcag 239 |||| |||| |||||||| ||| ||||||||||| ||| || ||||||||||| Sbjct: 106 cgaccacctcttcaagctgctcatcatcggcgacagcggtgtgggcaagagcag 159
>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181360 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagt 240 |||| ||| |||||| ||||| ||||| || | |||||||||||||| || |||| | || Sbjct: 151551 gactacgattacctgctcaagttcctcgtcctgggcgactccggcgtgggaaagacctgt 151492 Query: 241 ctcctc 246 |||||| Sbjct: 151491 ctcctc 151486
>ref|NM_130565.2| Drosophila melanogaster Rab27 CG14791-RC, transcript variant C (Rab27), mRNA Length = 1528 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagt 240 |||| ||| |||||| ||||| ||||| || | |||||||||||||| || |||| | || Sbjct: 753 gactacgattacctgctcaagttcctcgtcctgggcgactccggcgtgggaaagacctgt 812 Query: 241 ctcctc 246 |||||| Sbjct: 813 ctcctc 818
>ref|NM_078963.2| Drosophila melanogaster Rab-protein 3 CG7576-RA (Rab3), mRNA Length = 3751 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacagga 371 |||||||||||||||||||||| Sbjct: 827 tctgggacactgctggacagga 848
>ref|XM_693604.1| PREDICTED: Danio rerio similar to RAB13, member RAS oncogene family (LOC573788), mRNA Length = 1143 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 349 gtctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggg 408 ||||||||||| || |||||||| ||||||| |||| | |||| | |||||||||||| Sbjct: 694 gtctgggacacagcaggacaggagaggtttaagaccatcaccactgcatactacagaggg 753 Query: 409 gc 410 || Sbjct: 754 gc 755
>gb|AY060449.1| Drosophila melanogaster LP05860 full length cDNA Length = 3762 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacagga 371 |||||||||||||||||||||| Sbjct: 827 tctgggacactgctggacagga 848
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 ||||||||||||| ||||||||||||||| Sbjct: 5232937 tcctcatcggcgagcccggcgtcggcaaga 5232966
>ref|NM_201329.1| Danio rerio RAB13, member RAS oncogene family (rab13), mRNA Length = 1726 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 349 gtctgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggg 408 ||||||||||| || |||||||| ||||||| |||| | |||| | |||||||||||| Sbjct: 575 gtctgggacacagcaggacaggagaggtttaagaccatcaccactgcatactacagaggg 634 Query: 409 gc 410 || Sbjct: 635 gc 636
>gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 kDa (HSP101) mRNA, complete cds Length = 2821 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 ||||||||||||| ||||||||||||||| Sbjct: 684 tcctcatcggcgagcccggcgtcggcaaga 713
>gb|BT003609.1| Drosophila melanogaster GH17339 full insert cDNA Length = 1242 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Plus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagt 240 |||| ||| |||||| ||||| ||||| || | |||||||||||||| || |||| | || Sbjct: 457 gactacgattacctgctcaagttcctcgtcctgggcgactccggcgtgggaaagacctgt 516 Query: 241 ctcctc 246 |||||| Sbjct: 517 ctcctc 522
>dbj|AB112932.1| Drosophila melanogaster rab3 mRNA for Rab3, complete cds Length = 663 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacagga 371 |||||||||||||||||||||| Sbjct: 221 tctgggacactgctggacagga 242
>dbj|AK111946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A04, full insert sequence Length = 1190 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Plus Query: 179 cggacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagag 236 |||||| |||| |||| ||||||||||||||||||| ||| ||| || |||||||| Sbjct: 255 cggactacgaccacctcatcaagctcctcctcatcggggacagcggtgttggcaagag 312
>dbj|AK111499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K22, full insert sequence Length = 1146 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 233 cgactacctgttcaagatcgtgctgatcggggactccggcgt 274
>gb|AF052221.1|AF052221 Lolium perenne 4-coumarate--CoA ligase 4CL1 mRNA, complete cds Length = 2284 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 tcatcggcgactccggcgtcgg 230 |||||||||||||||||||||| Sbjct: 39 tcatcggcgactccggcgtcgg 18
>dbj|AK104527.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A01, full insert sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 158 cgactacctgttcaagatcgtgctgatcggggactccggcgt 199
>dbj|AK104362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C06, full insert sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cgactacctgttcaagctcctcctcatcggcgactccggcgt 227 |||||||||||||||| || | || ||||| ||||||||||| Sbjct: 158 cgactacctgttcaagatcgtgctgatcggggactccggcgt 199
>gb|AF076980.1|AF076980 Streptomyces albus G heat shock protein ClpB (clpB) gene, complete cds Length = 3291 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 ||||||||||||| ||||||||||||||| Sbjct: 1067 tcctcatcggcgagcccggcgtcggcaaga 1096
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 44.1 bits (22), Expect = 0.46 Identities = 55/66 (83%) Strand = Plus / Minus Query: 181 gacttcgactacctgttcaagctcctcctcatcggcgactccggcgtcggcaagagcagt 240 |||| ||| |||||| ||||| ||||| || | |||||||||||||| || |||| | || Sbjct: 14135 gactacgattacctgctcaagttcctcgtcctgggcgactccggcgtgggaaagacctgt 14076 Query: 241 ctcctc 246 |||||| Sbjct: 14075 ctcctc 14070
>gb|AY850352.1| Magnaporthe grisea formate dehydrogenase-like protein mRNA, complete cds Length = 1514 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 330 caagaagctcaagctcgccgtc 351 |||||||||||||||||||||| Sbjct: 615 caagaagctcaagctcgccgtc 636
>gb|AF013572.1|AF013572 Bombyx mori small GTP-binding protein (rabB) mRNA, complete cds Length = 952 Score = 44.1 bits (22), Expect = 0.46 Identities = 61/74 (82%) Strand = Plus / Plus Query: 352 tgggacactgctggacaggaaaggtttaggaccttgaccagctcttactacagaggggca 411 |||||||| ||||||||||| ||||||| ||| | ||| || ||||||||||| ||| Sbjct: 305 tgggacacagctggacaggagcggtttagaaccatcacctcatcatactacagaggagca 364 Query: 412 caagggatcatcat 425 || || |||||||| Sbjct: 365 catggaatcatcat 378
>emb|AJ970533.1| Triticum turgidum subsp. durum partial mRNA for heat shock protein 101 (hsp101b-A gene) Length = 1423 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 206 tcctcatcggcgactccggcgtcggcaaga 235 ||||||||||||| ||||||||||||||| Sbjct: 600 tcctcatcggcgagcccggcgtcggcaaga 629
>gb|U22433.1|ZMU22433 Zea mays clone Zm-Rab2-B GTP binding protein (rab2) mRNA, complete cds Length = 1038 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 189 ctacctgttcaagctcctcctcatcggcgactccggcgtcggcaag 234 ||||||||||||| | || ||||||||||| | |||||||||||| Sbjct: 120 ctacctgttcaagtacatcatcatcggcgacacaggcgtcggcaag 165
>gb|M64621.1|DRORAB3 Drosophila rab3 protein, complete cds Length = 2306 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 tctgggacactgctggacagga 371 |||||||||||||||||||||| Sbjct: 807 tctgggacactgctggacagga 828
>ref|NM_112768.1| Arabidopsis thaliana GTP binding AT3G18820 mRNA, complete cds Length = 1027 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggttt 378 ||||||| || |||||||||||||||||| Sbjct: 347 tctgggatacagctggacaggaaaggttt 375
>ref|XM_523865.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-31 (Rab-22B) (LOC468476), mRNA Length = 429 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggttt 378 |||||||||||||||| |||||| ||||| Sbjct: 221 tctgggacactgctggtcaggaacggttt 249
>gb|BT020028.1| Homo sapiens RAB31, member RAS oncogene family mRNA, complete cds Length = 585 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggttt 378 |||||||||||||||| |||||| ||||| Sbjct: 173 tctgggacactgctggtcaggaacggttt 201
>gb|BT020027.1| Homo sapiens RAB31, member RAS oncogene family mRNA, complete cds Length = 585 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggttt 378 |||||||||||||||| |||||| ||||| Sbjct: 173 tctgggacactgctggtcaggaacggttt 201
>gb|BT020026.1| Synthetic construct Homo sapiens RAB31, member RAS oncogene family mRNA, partial cds Length = 585 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 tctgggacactgctggacaggaaaggttt 378 |||||||||||||||| |||||| ||||| Sbjct: 173 tctgggacactgctggtcaggaacggttt 201 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,453,620 Number of Sequences: 3902068 Number of extensions: 4453620 Number of successful extensions: 86791 Number of sequences better than 10.0: 385 Number of HSP's better than 10.0 without gapping: 394 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 85136 Number of HSP's gapped (non-prelim): 1643 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)