Clone Name | bart37e09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A06, full insert sequence Length = 3391 Score = 176 bits (89), Expect = 4e-41 Identities = 146/165 (88%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||| Sbjct: 2276 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgactgccagacctgccg 2335 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||| || Sbjct: 2336 ctggatggcgccggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcc 2395 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 2396 catctccgacgaccacaggaccaaggccctgcaggctctgctctc 2440
>ref|XM_507554.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1218 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 169 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 228 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 229 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 288 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 289 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 333
>ref|XM_468525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 169 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 228 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 229 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 288 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 289 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 333
>ref|XM_507553.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1334 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 168 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 227 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 228 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 287 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 288 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 332
>ref|XM_507067.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1381 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 215 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 274 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 275 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 334 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 335 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 379
>dbj|AK122029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F11, full insert sequence Length = 1381 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 215 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 274 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 275 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 334 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 335 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 379
>dbj|AK104532.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C07, full insert sequence Length = 1218 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 169 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 228 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 229 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 288 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 289 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 333
>dbj|AK104364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C11, full insert sequence Length = 1218 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 169 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 228 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 229 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 288 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 289 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 333
>dbj|AK064830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F10, full insert sequence Length = 1335 Score = 153 bits (77), Expect = 6e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 168 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 227 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 228 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 287 Query: 402 cagctccgaggagcagaggaccaaggcactgcaggctttgctctc 446 || |||||| || || ||||||||||| ||||||||| ||||||| Sbjct: 288 catctccgacgaacacaggaccaaggccctgcaggctctgctctc 332
>ref|XM_468526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1144 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 164 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 223 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 224 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 283 Query: 402 cagctccga 410 || |||||| Sbjct: 284 catctccga 292
>dbj|AK065244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I14, full insert sequence Length = 1142 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 282 gcagaacgtctccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccg 341 |||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||||| Sbjct: 162 gcagaacgtccccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccg 221 Query: 342 gtggatggcgccggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcc 401 |||||||| ||||||||||||||||||||||||| | ||||||| || |||||||| Sbjct: 222 ctggatggcttcggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcc 281 Query: 402 cagctccga 410 || |||||| Sbjct: 282 catctccga 290
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 354 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 413 |||||||||||||||||||||||| | |||||||||| ||||| |||| |||||| || Sbjct: 35685641 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 35685582 Query: 414 gcagaggaccaaggcactgcagg 436 || ||||||||||| ||||||| Sbjct: 35685581 ccacaggaccaaggccctgcagg 35685559 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 354 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 413 |||||||||||||||||||||||| | ||||||| || |||||||||| |||||| || Sbjct: 35681623 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 35681564 Query: 414 gcagaggaccaaggcactgcagg 436 || ||||||||||| ||||||| Sbjct: 35681563 acacaggaccaaggccctgcagg 35681541 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 310 gatcaccggtgcatcgactgcgccacctgccggtggatggcgccgg 355 |||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 35685772 gatcaccgatgcatcgactgccagacctgccgctggatggcgccgg 35685727 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 30348478 agctcagctcagctcagccc 30348459
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 354 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 413 |||||||||||||||||||||||| | |||||||||| ||||| |||| |||||| || Sbjct: 46255 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 46196 Query: 414 gcagaggaccaaggcactgcagg 436 || ||||||||||| ||||||| Sbjct: 46195 ccacaggaccaaggccctgcagg 46173 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 354 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 413 |||||||||||||||||||||||| | ||||||| || |||||||||| |||||| || Sbjct: 42237 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 42178 Query: 414 gcagaggaccaaggcactgcagg 436 || ||||||||||| ||||||| Sbjct: 42177 acacaggaccaaggccctgcagg 42155 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 310 gatcaccggtgcatcgactgcgccacctgccggtggatggcgccgg 355 |||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 46386 gatcaccgatgcatcgactgccagacctgccgctggatggcgccgg 46341
>dbj|AB158483.1| Cyanidioschyzon merolae genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, complete sequence, clone:BAC clone H1D17 Length = 98410 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 319 tgcatcgactgcgccacctgccggtggatggcgccg 354 ||||||||||| | ||||||||||||||||||||| Sbjct: 51397 tgcatcgactgtgatacctgccggtggatggcgccg 51432
>emb|Z98681.1|OAIMMU3 Ovis aries immunoglobulin mu switch, 3' region Length = 2067 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 aagctcagctcagctcagccca 44 |||||||||||||||||||||| Sbjct: 1317 aagctcagctcagctcagccca 1296 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1256 agctcagctcagctcagccca 1236 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 409 agctcagctcagctcagccca 389
>gb|J00472.1|MUSIGCD39 mouse germline IgE gene, switch region Length = 652 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagcccac 45 |||||||||||||||||||||| Sbjct: 81 agctcagctcagctcagcccac 60
>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence Length = 215537 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 aagctcagctcagctcagccc 43 ||||||||||||||||||||| Sbjct: 129157 aagctcagctcagctcagccc 129177
>gb|AY386696.1| Oryctolagus cuniculus clone 27N5, complete sequence Length = 146676 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 146234 agctcagctcagctcagccca 146214 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 145779 agctcagctcagctcagccca 145759 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 133318 agctcagctcagctcagccca 133298 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 102705 agctcagctcagctcagccca 102685 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 102207 agctcagctcagctcagccca 102187 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 101718 agctcagctcagctcagccca 101698 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 100731 agctcagctcagctcagccca 100711 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 100302 agctcagctcagctcagccca 100282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 99162 agctcagctcagctcagccca 99142 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 98894 agctcagctcagctcagccca 98874 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 81764 agctcagctcagctcagccca 81744 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 81744 agctcagctcagctcagccca 81724 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 67547 agctcagctcagctcagccca 67527 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 67231 agctcagctcagctcagccca 67211 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 66590 agctcagctcagctcagccca 66570 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 133591 agctcagctcagctcagccc 133572 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 133325 caagctcagctcagctcagc 133306 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctcagctcagctcagccca 44 |||||||||||||||||||| Sbjct: 83701 gctcagctcagctcagccca 83682 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagcccac 45 ||||| |||||||||||||||||| Sbjct: 82380 caagcccagctcagctcagcccac 82357 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagcccac 45 ||||| |||||||||||||||||| Sbjct: 81073 caagcccagctcagctcagcccac 81050
>gb|AY386695.1| Oryctolagus cuniculus clone 219D23, complete sequence Length = 137302 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 102886 agctcagctcagctcagccca 102866
>gb|J00442.1|MUSIGCD09 Mouse Ig germline mu-chain switch region (C-region), part c Length = 1461 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 467 agctcagctcagctcagccca 447
>gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complete sequence Length = 150101 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 aagctcagctcagctcagccc 43 ||||||||||||||||||||| Sbjct: 118268 aagctcagctcagctcagccc 118248
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 141248 agctcagctcagctcagccca 141268
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ggctgcagtgcagcgacggca 79 ||||||||||||||||||||| Sbjct: 425877 ggctgcagtgcagcgacggca 425857
>gb|AC073553.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-270B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 138420 agctcagctcagctcagccca 138400 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 138280 agctcagctcagctcagccca 138260 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 138085 agctcagctcagctcagccca 138065
>gb|DQ090924.1| Homo sapiens isolate Edm 1394 WHSC1/IGH@ fusion gene, partial sequence Length = 572 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 472 agctcagctcagctcagccca 452
>emb|BX957251.3| Zebrafish DNA sequence from clone CH211-152L15 in linkage group 23, complete sequence Length = 120410 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 101490 agctcagctcagctcagccca 101470
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 caccggtgcatcgactgcgcc 333 ||||||||||||||||||||| Sbjct: 2858584 caccggtgcatcgactgcgcc 2858564
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 22577 agctcagctcagctcagccca 22597
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 ttcttcgtcgatcaccggtgc 321 ||||||||||||||||||||| Sbjct: 1961780 ttcttcgtcgatcaccggtgc 1961760
>emb|AJ630626.1| Homo sapiens t(8;14)(q24;q32) translocation breakpoint in Burkitt's lymphoma, c-myc gene position 1484 Length = 250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 94 agctcagctcagctcagccca 74
>emb|AJ630613.1| Homo sapiens t(8;14)(q24;q32) translocation breakpoint in Burkitt's lymphoma, c-myc gene position 3483 Length = 250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 230 agctcagctcagctcagccca 210
>gb|K01306.1|HUMIGCB2 Human IgM germline chain J-delta region: mu/alpha switch Length = 147 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 55 agctcagctcagctcagccca 35
>emb|AJ628704.1| Homo sapiens t(8;14)(q24;q32) translocation breakpoint sequence in Burkitt's lymphoma, c-myc gene position 3902 Length = 250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 183 agctcagctcagctcagccca 163
>emb|X63555.1|HSBL67 Homo sapiens DNA for translocation breakpoint sequence BL67 in Burkitt's lymphoma, cell line BL67 Length = 3545 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 3306 agctcagctcagctcagccca 3326 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2352 agctcagctcagctcagccca 2372
>gb|U50149.1|SSU50149 Sus scrofa IgM heavy chain gene, switch region and exons encoding ch1-ch4 and secretion domains, partial cds Length = 5994 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2483 agctcagctcagctcagccca 2463 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2320 agctcagctcagctcagccca 2300 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2058 agctcagctcagctcagccca 2038 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1887 agctcagctcagctcagccca 1867 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1609 agctcagctcagctcagccca 1589 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1359 agctcagctcagctcagccca 1339 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 933 agctcagctcagctcagccca 913 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctcagctcagctcagccca 44 |||||||||||||||||||| Sbjct: 3397 gctcagctcagctcagccca 3378
>emb|AJ270948.1|HSA270948 Homo sapiens immunoglobulin junction mu/epsilon heavy chain switch region clone 35 Length = 487 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 230 agctcagctcagctcagccca 210
>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 68381 agctcagctcagctcagccca 68361 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 68147 agctcagctcagctcagccca 68127
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 cgagttcttcgtcgatcaccg 317 ||||||||||||||||||||| Sbjct: 1344533 cgagttcttcgtcgatcaccg 1344513
>emb|BX279523.5| Zebrafish DNA sequence from clone CH211-63O20 in linkage group 20, complete sequence Length = 165073 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 134563 agctcagctcagctcagccca 134583
>emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-417P24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169802 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 129349 agctcagctcagctcagccca 129369 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 128908 agctcagctcagctcagccca 128928 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 128394 agctcagctcagctcagccca 128414
>gb|AF030305.1|AF030305 Homo sapiens IgA2 heavy chain gene switch region sequence Length = 2758 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2464 agctcagctcagctcagccca 2444 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2230 agctcagctcagctcagccca 2210 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 721 agctcagctcagctcagccca 701
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 caccggtgcatcgactgcgcc 333 ||||||||||||||||||||| Sbjct: 2880439 caccggtgcatcgactgcgcc 2880419
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1233882 agctcagctcagctcagccca 1233862 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1233648 agctcagctcagctcagccca 1233628 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1113504 agctcagctcagctcagccca 1113484 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1111592 agctcagctcagctcagccca 1111572 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 964844 agctcagctcagctcagccca 964824 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 964330 agctcagctcagctcagccca 964310 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 963889 agctcagctcagctcagccca 963869
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1213773 agctcagctcagctcagccca 1213753 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1212909 agctcagctcagctcagccca 1212889 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1212744 agctcagctcagctcagccca 1212724 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tcaagctcagctcagctcagccca 44 ||||||||||||||||||| |||| Sbjct: 1212032 tcaagctcagctcagctcacccca 1212009
>gb|U45428.1|MMU45428 Mus musculus plasmacytoma TEPC 1194 translocation (12;15), c-myc/Ig 5'Smu gene fusion Length = 1375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 675 agctcagctcagctcagccca 695
>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12 Length = 163455 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 aagctcagctcagctcagccc 43 ||||||||||||||||||||| Sbjct: 138239 aagctcagctcagctcagccc 138259
>emb|X56795.1|HSJHCMU Human IgM heavy chain switch region Length = 4502 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1691 agctcagctcagctcagccca 1671 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1256 agctcagctcagctcagccca 1236
>emb|X54713.1|HSIGHMUS Human Mu switch DNA of the immunoglobulin heavy-chain gene locus Length = 4525 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2183 agctcagctcagctcagccca 2163 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1668 agctcagctcagctcagccca 1648 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 1226 agctcagctcagctcagccca 1206
>gb|M38077.1|MUSIGXYZ Mouse Ig S-gamma-1/S-mu recombination sites Length = 60 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 54 agctcagctcagctcagccca 34
>gb|J00601.1|MUSIGHAM Mouse Ig mu S-region aberrantly rearranged 18b-mu gene from MPC11 Length = 587 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 424 agctcagctcagctcagccca 444
>gb|L19121.1|HUMIGACHSR Human IgA C alpha 1 switch region (Sa1) Length = 3326 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 2281 agctcagctcagctcagccca 2261 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 728 agctcagctcagctcagccca 708
>emb|AL901608.1|CNS08CBC Human chromosome 14 DNA sequence Partial sequence from BAC C-2194O15_PCR1 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 38314 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 33435 agctcagctcagctcagccca 33415 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccca 44 ||||||||||||||||||||| Sbjct: 31523 agctcagctcagctcagccca 31503
>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence Length = 213244 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 180748 caagctcagctcagctcagc 180729
>ref|XM_864359.1| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 2 (LOC506694), mRNA Length = 2328 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ccgtggcggcgcagcccagc 405 |||||||||||||||||||| Sbjct: 1718 ccgtggcggcgcagcccagc 1699
>ref|XM_583176.2| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 1 (LOC506694), mRNA Length = 2289 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ccgtggcggcgcagcccagc 405 |||||||||||||||||||| Sbjct: 1679 ccgtggcggcgcagcccagc 1660
>ref|XM_872751.1| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 3 (LOC506694), mRNA Length = 2421 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ccgtggcggcgcagcccagc 405 |||||||||||||||||||| Sbjct: 1811 ccgtggcggcgcagcccagc 1792
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 68071 caagctcagctcagctcagc 68052
>ref|XM_430034.1| PREDICTED: Gallus gallus hypothetical gene supported by BX929854 (LOC423248), mRNA Length = 965 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 825 agctcagctcagctcagccc 806
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 112277 caagctcagctcagctcagc 112296
>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete sequence Length = 192020 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 110092 agctcagctcagctcagccc 110111
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tgagtcaccggctcaccgcc 144 |||||||||||||||||||| Sbjct: 11907164 tgagtcaccggctcaccgcc 11907145
>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence Length = 224704 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 210819 agctcagctcagctcagccc 210800
>ref|XM_755817.1| Ustilago maydis 521 hypothetical protein (UM04763.1) partial mRNA Length = 705 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 60 agctcagctcagctcagccc 79
>emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 in linkage group 11, complete sequence Length = 199426 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 49234 caagctcagctcagctcagc 49215
>gb|J00427.1|AH003512S4 Mus musculus domesticus immunoglobulin heavy chain variable region V1 (Igha) gene, intron Length = 340 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 260 agctcagctcagctcagccc 241
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 caggctttgctctcttgccc 452 |||||||||||||||||||| Sbjct: 78709 caggctttgctctcttgccc 78690
>emb|AL023828.1|CEY17G7B Caenorhabditis elegans YAC Y17G7B, complete sequence Length = 143092 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 caaccggaaccggcggcgagagca 284 |||||||||||||||| ||||||| Sbjct: 66295 caaccggaaccggcggagagagca 66272
>emb|AM051357.1| Gasterosteus aculeatus mRNA for beclin 1 (atg6 gene) Length = 1596 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 ctccgaggagcagaggaccaaggc 428 ||||||||||||| |||||||||| Sbjct: 1248 ctccgaggagcagtggaccaaggc 1271
>gb|AC113127.6| Mus musculus chromosome 9, clone RP23-352H13, complete sequence Length = 185801 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctcagctcagctcagccca 44 |||||||||||||||||||| Sbjct: 135714 gctcagctcagctcagccca 135695
>gb|AC164882.2| Mus musculus BAC clone RP23-88F16 from chromosome 9, complete sequence Length = 203020 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gctcagctcagctcagccca 44 |||||||||||||||||||| Sbjct: 183356 gctcagctcagctcagccca 183375
>gb|DQ421813.1| Oryza glumipatula voucher IRGC 105672 shattering (sh4) gene, partial cds Length = 1639 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 464 agctcagctcagctcagccc 483
>gb|DQ421812.1| Oryza barthii voucher IRGC 101196 shattering (sh4) gene, partial cds Length = 1650 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 464 agctcagctcagctcagccc 483
>emb|X70879.1|HVMYB1G H.vulgare Myb1 gene Length = 2587 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 575 caagctcagctcagctcagc 556
>ref|XM_777406.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8777-PA (LOC577162), mRNA Length = 3363 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 aagctcagctcagctcagcccaca 46 ||||||||||||||||||| |||| Sbjct: 3324 aagctcagctcagctcagctcaca 3347
>emb|X57855.1|MMGECGEC M.musculus gamma E-crystallin gene for gamma E-crystallin Length = 3632 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 3155 caagctcagctcagctcagc 3174
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gcggcgctcgacaaccggaaccggcggc 277 |||||||||||| ||| ||||||||||| Sbjct: 122489 gcggcgctcgaccacccgaaccggcggc 122462
>emb|AL663029.11| Mouse DNA sequence from clone RP23-355B12 on chromosome 11 Contains a novel gene, complete sequence Length = 170968 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 79052 agctcagctcagctcagccc 79071
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 69169 caagctcagctcagctcagc 69188
>gb|AF393636.1| Caenorhabditis elegans cyclophilin-16 (cyp-16) mRNA, complete cds Length = 669 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 caaccggaaccggcggcgagagca 284 |||||||||||||||| ||||||| Sbjct: 209 caaccggaaccggcggagagagca 232
>ref|NM_142952.2| Drosophila melanogaster Autophagy-specific gene 6 CG5429-RA (Atg6), mRNA Length = 1733 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 gaggagcagaggaccaaggcactg 432 ||||||||| |||||||||||||| Sbjct: 1556 gaggagcagtggaccaaggcactg 1579
>gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, complete sequence Length = 164278 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cactgcaggctttgctctct 447 |||||||||||||||||||| Sbjct: 5082 cactgcaggctttgctctct 5063
>gb|AY061424.1| Drosophila melanogaster LD35669 full length cDNA Length = 1746 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 gaggagcagaggaccaaggcactg 432 ||||||||| |||||||||||||| Sbjct: 1556 gaggagcagtggaccaaggcactg 1579
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccgccgtggcggcgcagccc 402 |||||||||||||||||||| Sbjct: 4638690 ccgccgtggcggcgcagccc 4638671
>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190081 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 54912 agctcagctcagctcagccc 54893
>ref|NM_064161.3| Caenorhabditis elegans CYclophyliN family member (cyn-16) (cyn-16) mRNA, complete cds Length = 1600 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 caaccggaaccggcggcgagagca 284 |||||||||||||||| ||||||| Sbjct: 209 caaccggaaccggcggagagagca 232
>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone BACR16C17, complete sequence Length = 180425 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tcaagctcagctcagctcag 40 |||||||||||||||||||| Sbjct: 86781 tcaagctcagctcagctcag 86800
>emb|BX929854.2| Gallus gallus finished cDNA, clone ChEST337d4 Length = 789 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 646 agctcagctcagctcagccc 627
>emb|CR353540.1| Gallus gallus finished cDNA, clone ChEST129e8 Length = 1175 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cagctccgaggagcagagga 421 |||||||||||||||||||| Sbjct: 407 cagctccgaggagcagagga 426
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 20429021 caagctcagctcagctcagc 20429040
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 27881860 caagctcagctcagctcagc 27881879 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 19364722 caagctcagctcagctcagc 19364703
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tgagtcaccggctcaccgcc 144 |||||||||||||||||||| Sbjct: 11903927 tgagtcaccggctcaccgcc 11903908
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 31692878 caagctcagctcagctcagc 31692859
>gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, region 95C-95D, BAC clone BACR15J11, complete sequence Length = 186159 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 gaggagcagaggaccaaggcactg 432 ||||||||| |||||||||||||| Sbjct: 117786 gaggagcagtggaccaaggcactg 117763
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 106610 caagctcagctcagctcagc 106591
>gb|AC136759.4| Homo sapiens chromosome 11, clone RP11-114J20, complete sequence Length = 152269 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 85053 caagctcagctcagctcagc 85072
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tgagtcaccggctcaccgcc 144 |||||||||||||||||||| Sbjct: 3489 tgagtcaccggctcaccgcc 3508
>gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, complete sequence Length = 169232 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 aggctttgctctcttgccca 453 |||||||||||||||||||| Sbjct: 105393 aggctttgctctcttgccca 105412
>gb|AC078878.20| Homo sapiens 12 BAC RP11-983C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172393 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 169756 agctcagctcagctcagccc 169775
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 319 tgcatcgactgcgccacctgccggtggatggc 350 ||||||||||||| ||||||||| ||| |||| Sbjct: 4357197 tgcatcgactgcgacacctgccgctgggtggc 4357228
>emb|AL954663.13| Zebrafish DNA sequence from clone DKEY-47L19 in linkage group 11, complete sequence Length = 224753 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 205253 caagctcagctcagctcagc 205234
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 29338 agctcagctcagctcagccc 29319
>emb|X14965.1|PSMUTAB Propionibacterium shermanii mutA and mutB genes for methylmalonyl-CoA mutase (EC 5.4.99.2) Length = 4512 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ccgacaagccggcgaaggac 489 |||||||||||||||||||| Sbjct: 920 ccgacaagccggcgaaggac 939
>dbj|AK067179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097F03, full insert sequence Length = 1272 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 31 caagctcagctcagctcagc 50
>dbj|AK058570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E07, full insert sequence Length = 1609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 103 caagctcagctcagctcagc 84
>gb|AE003746.3| Drosophila melanogaster chromosome 3R, section 84 of 118 of the complete sequence Length = 218498 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 gaggagcagaggaccaaggcactg 432 ||||||||| |||||||||||||| Sbjct: 17498 gaggagcagtggaccaaggcactg 17475
>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete sequence Length = 229685 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tcaagctcagctcagctcag 40 |||||||||||||||||||| Sbjct: 171843 tcaagctcagctcagctcag 171862
>dbj|AP000626.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21B22, complete sequences Length = 106316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 50070 caagctcagctcagctcagc 50051
>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11 Length = 200610 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 44290 agctcagctcagctcagccc 44271
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 20440293 caagctcagctcagctcagc 20440312
>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence Length = 177464 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 agctcagctcagctcagcccacag 47 |||||||||||||||||| ||||| Sbjct: 100135 agctcagctcagctcagctcacag 100112
>emb|AL929306.4| Zebrafish DNA sequence from clone CH211-145C5 in linkage group 11, complete sequence Length = 176222 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 67169 caagctcagctcagctcagc 67150
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctcagctcagctcagccca 44 |||||||||||||||||||| Sbjct: 826016 gctcagctcagctcagccca 825997
>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence Length = 206095 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 caagctcagctcagctcagc 41 |||||||||||||||||||| Sbjct: 123525 caagctcagctcagctcagc 123544
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tgagtcaccggctcaccgcc 144 |||||||||||||||||||| Sbjct: 8426 tgagtcaccggctcaccgcc 8407
>gb|AC167231.12| Mus musculus BAC RP23-416P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 18965 agctcagctcagctcagccc 18984
>gb|AC097015.2| Homo sapiens chromosome 3 clone RP11-82B23, complete sequence Length = 178596 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcagctcagctcagccc 43 |||||||||||||||||||| Sbjct: 102356 agctcagctcagctcagccc 102375 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,628,827 Number of Sequences: 3902068 Number of extensions: 2628827 Number of successful extensions: 64018 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61525 Number of HSP's gapped (non-prelim): 2467 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)