ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart37e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor 32 0.48

>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor|
          Length = 287

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 154 SGVDAIGTYCAK---NGTSAET-QANIDQDLAALVPXXXXXXXXXXXXXXXXXXVWGLAH 321
           S  D + T+C K   N TS  T   N++  L+ L                    V G+  
Sbjct: 24  SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83

Query: 322 CRGDVPRHDCSLCLAAAAKEVA 387
           C GDV R  C+ C+  A  E+A
Sbjct: 84  CTGDVNRTTCNACVKNATIEIA 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,496,415
Number of Sequences: 219361
Number of extensions: 200423
Number of successful extensions: 515
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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