ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart37e01 |
|---|---|
| Clone Library Name | barley_pub |
>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1| Length = 602 Score = 46.2 bits (108), Expect = 6e-05 Identities = 33/103 (32%), Positives = 50/103 (48%) Frame = +1 Query: 223 ITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKRNYTY 402 I +IG G+L+LP + GWV G L +FAL T+ T+ LL C +D + + Y Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGY 277 Query: 403 MDAVGSLLGKGQVWFCGLCQYVSLVGTAIGYTITASISAAALY 531 A G+ KG+ L + L+G+ + I S AL+ Sbjct: 278 A-AFGT---KGRALISALFT-LDLLGSGVSLVILFGDSLNALF 315
>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (rGVAT) (Solute carrier family 32 member 1) Length = 525 Score = 38.1 bits (87), Expect = 0.016 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 10/147 (6%) Frame = +1 Query: 97 GGLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASARVITAVIGSGVLSLPWSVAQ 276 GG P P + + + A ++ D KP+ T W A V A+ G VL LP+++ Sbjct: 88 GGAPLPPSGSKDQAVGAGGEFGGHD--KPKITA--WEAGWNVTNAIQGMFVLGLPYAILH 143 Query: 277 LGWVAGPATLLLFALITYYTSVLL----------GDCYRSDDAVAGKRNYTYMDAVGSLL 426 G++ G ++ A++ YT +L G+ R D+ N +L Sbjct: 144 GGYL-GLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLG 202 Query: 427 GKGQVWFCGLCQYVSLVGTAIGYTITA 507 G+ + Q + LV T I Y + + Sbjct: 203 GR----VVNVAQIIELVMTCILYVVVS 225
>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (mVIAAT) (mVGAT) (Solute carrier family 32 member 1) Length = 525 Score = 38.1 bits (87), Expect = 0.016 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 10/147 (6%) Frame = +1 Query: 97 GGLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASARVITAVIGSGVLSLPWSVAQ 276 GG P P + + + A ++ D KP+ T W A V A+ G VL LP+++ Sbjct: 88 GGAPLPPSGSKDQAVGAGGEFGGHD--KPKITA--WEAGWNVTNAIQGMFVLGLPYAILH 143 Query: 277 LGWVAGPATLLLFALITYYTSVLL----------GDCYRSDDAVAGKRNYTYMDAVGSLL 426 G++ G ++ A++ YT +L G+ R D+ N +L Sbjct: 144 GGYL-GLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLG 202 Query: 427 GKGQVWFCGLCQYVSLVGTAIGYTITA 507 G+ + Q + LV T I Y + + Sbjct: 203 GR----VVNVAQIIELVMTCILYVVVS 225
>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV| Length = 615 Score = 37.4 bits (85), Expect = 0.027 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +1 Query: 166 DDDGKPRRTGTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTS-V 342 D GK T+++ + ++G+ +L++PW++ Q G V G +L A I +YT+ + Sbjct: 158 DVSGKQGSIVTIFS----IWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYI 213 Query: 343 LLGDCYRSDDAVAGKRNYTYMDAVGSLLGKGQVWFCGLCQYVSLVGTAIGYTITAS 510 ++ R D + D SL G+ + + L+G I Y + S Sbjct: 214 VIESPKRLQDLSVDPLLAEFSDVCKSLFGRIGEYCAVVFSVCVLIGGVIVYWVLMS 269
>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)| (MtLAX4) Length = 482 Score = 37.4 bits (85), Expect = 0.027 Identities = 22/74 (29%), Positives = 37/74 (50%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372 G+VW A + + +L+LP+S +QLG V+G + + LI +T+ L+ Y Sbjct: 46 GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYR 105 Query: 373 AVAGKRNYTYMDAV 414 A K N + + V Sbjct: 106 ARKEKENVNFKNHV 119
>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2| Length = 482 Score = 34.3 bits (77), Expect = 0.23 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 15/98 (15%) Frame = +1 Query: 112 PAGDLRRRVIAAADD---------YSLDDDGKPRRT------GTVWTASARVITAVIGSG 246 PAGD I A ++ DGK T G+VW A + + Sbjct: 3 PAGDQAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVAQV 62 Query: 247 VLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360 +L+LP+S +QLG ++G + + L+ +T+ L+ Y Sbjct: 63 LLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLY 100
>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) Length = 476 Score = 34.3 bits (77), Expect = 0.23 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Frame = +1 Query: 160 SLDDDGKPRRTG----TVWTASA-RVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324 +L G +R G T W + ++ IG+G+L LP +V G V GP +LL+ ++ Sbjct: 31 NLSSPGSYQRFGQSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIV 90 Query: 325 TYYTSVLLGDC 357 + +L C Sbjct: 91 AVHCMGILVKC 101
>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein| 1) (Polar auxin transport inhibitor resistant protein 1) Length = 485 Score = 33.9 bits (76), Expect = 0.29 Identities = 16/56 (28%), Positives = 31/56 (55%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360 G+VW A + + +L+LP+S +QLG ++G + + L+ +T+ L+ Y Sbjct: 46 GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLY 101
>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)| (MtLAX2) Length = 484 Score = 33.1 bits (74), Expect = 0.50 Identities = 18/74 (24%), Positives = 37/74 (50%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372 G+VW A + + +L+LP+S +QLG ++G + + ++ +T+ L+ Y Sbjct: 46 GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYR 105 Query: 373 AVAGKRNYTYMDAV 414 + K N + + V Sbjct: 106 SRKEKENVNFKNHV 119
>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1| Length = 492 Score = 32.7 bits (73), Expect = 0.66 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360 G+VW A + + +L+LP+S +QLG ++G L + + +T+ L+ Y Sbjct: 54 GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLY 109
>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral amino acid/proton symporter) Length = 475 Score = 32.3 bits (72), Expect = 0.86 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 235 IGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357 IG+G+L LP +V G + GP +LL+ ++ + +L C Sbjct: 60 IGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) Length = 475 Score = 32.3 bits (72), Expect = 0.86 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 235 IGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357 IG+G+L LP +V G + GP +LL+ ++ + +L C Sbjct: 60 IGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
>LYSI_CORGL (P35865) L-lysine transport protein (L-lysine permease)| Length = 501 Score = 32.3 bits (72), Expect = 0.86 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = +1 Query: 187 RTGTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324 RT ++ T A +I + +G+G+ S+P ++ G VAGP +L+ LI Sbjct: 18 RTVSIRTLIALIIGSTVGAGIFSIPQNI---GSVAGPGAMLIGWLI 60
>VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (Solute carrier family 32 member 1) Length = 525 Score = 32.0 bits (71), Expect = 1.1 Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 10/146 (6%) Frame = +1 Query: 100 GLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASARVITAVIGSGVLSLPWSVAQL 279 G P P + +V A + D KP+ T W A V A+ G VL LP+++ Sbjct: 90 GAPLPPSGSKDQVGAGGEFGGHD---KPKITA--WEAGWNVTNAIQGMFVLGLPYAILHG 144 Query: 280 GWVAGPATLLLFALITYYTSVLL----------GDCYRSDDAVAGKRNYTYMDAVGSLLG 429 G++ G ++ A++ YT +L G+ R D+ N +L G Sbjct: 145 GYL-GLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGG 203 Query: 430 KGQVWFCGLCQYVSLVGTAIGYTITA 507 + + Q + LV T I Y + + Sbjct: 204 R----VVNVAQIIELVMTCILYVVVS 225
>ARCD_SHIFL (P0AAE7) Putative arginine/ornithine antiporter| Length = 460 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Frame = +1 Query: 211 SARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKR 390 +A V+++++G+GV SLP ++A VA PA LL+ IT +LL + + Sbjct: 11 TALVLSSMLGAGVFSLPQNMAA---VASPAALLIGWGITGAGILLLAFAMLILTRIRPEL 67 Query: 391 N---YTY-MDAVGSLLGKGQVWFCGLCQYVSLV 477 + +TY + G L+G W LC ++ V Sbjct: 68 DGGIFTYAREGFGELIGFCSAWGYWLCAVIANV 100
>ARCD_ECOLI (P0AAE5) Putative arginine/ornithine antiporter| Length = 460 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Frame = +1 Query: 211 SARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKR 390 +A V+++++G+GV SLP ++A VA PA LL+ IT +LL + + Sbjct: 11 TALVLSSMLGAGVFSLPQNMAA---VASPAALLIGWGITGAGILLLAFAMLILTRIRPEL 67 Query: 391 N---YTY-MDAVGSLLGKGQVWFCGLCQYVSLV 477 + +TY + G L+G W LC ++ V Sbjct: 68 DGGIFTYAREGFGELIGFCSAWGYWLCAVIANV 100
>ARCD_ECOL6 (P0AAE6) Putative arginine/ornithine antiporter| Length = 460 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Frame = +1 Query: 211 SARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKR 390 +A V+++++G+GV SLP ++A VA PA LL+ IT +LL + + Sbjct: 11 TALVLSSMLGAGVFSLPQNMAA---VASPAALLIGWGITGAGILLLAFAMLILTRIRPEL 67 Query: 391 N---YTY-MDAVGSLLGKGQVWFCGLCQYVSLV 477 + +TY + G L+G W LC ++ V Sbjct: 68 DGGIFTYAREGFGELIGFCSAWGYWLCAVIANV 100
>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)| Length = 488 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/56 (26%), Positives = 30/56 (53%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360 G+ W A + + +L+LP+S +QLG ++G + + L+ +T+ L+ Y Sbjct: 51 GSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLY 106
>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)| Length = 470 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 12/107 (11%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY---- 360 G+V+ A + + +L+LP+S +QLG ++G L + L+ +T+ L+ Y Sbjct: 44 GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYR 103 Query: 361 -RSDDAVAGKRNYT--YMDAVGSLLGK-----GQVWFCGLCQYVSLV 477 R + RN+ + + + LLGK G ++ C + S++ Sbjct: 104 TRKEREKFDFRNHVIQWFEVLDGLLGKHWRNLGLIFNCTFLLFGSVI 150
>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (hVIAAT) (Solute carrier family 32 member 1) Length = 525 Score = 31.2 bits (69), Expect = 1.9 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = +1 Query: 196 TVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLL--------- 348 T W A V A+ G VL LP+++ G++ G ++ A++ YT +L Sbjct: 117 TAWEAGWNVTNAIQGMFVLGLPYAILHGGYL-GLFLIIFAAVVCCYTGKILIACLYEENE 175 Query: 349 -GDCYRSDDAVAGKRNYTYMDAVGSLLGKGQVWFCGLCQYVSLVGTAIGYTITA 507 G+ R D+ N +L G+ + Q + LV T I Y + + Sbjct: 176 DGEVVRVRDSYVAIANACCAPRFPTLGGR----VVNVAQIIELVMTCILYVVVS 225
>AVT7_YEAST (P40501) Vacuolar amino acid transporter 7| Length = 490 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/59 (23%), Positives = 32/59 (54%) Frame = +1 Query: 190 TGTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRS 366 T + +++A ++ ++G+G L++P+S G + G LL A+ + +L C ++ Sbjct: 4 TSSALSSTANLVKTIVGAGTLAIPYSFKSDGVLVGVILTLLAAVTSGLGLFVLSKCSKT 62
>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)| (MtLAX1) Length = 479 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/74 (24%), Positives = 38/74 (51%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372 G+V+ A + + +L+LP+S +QLG ++G + + L+ +T+ L+ Y Sbjct: 45 GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYR 104 Query: 373 AVAGKRNYTYMDAV 414 + K N ++ + V Sbjct: 105 SRKEKENVSFKNHV 118
>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4| Length = 480 Score = 30.8 bits (68), Expect = 2.5 Identities = 16/56 (28%), Positives = 31/56 (55%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360 G+V+ A + + +L+LP+S +QLG +G A + + L+ +T+ L+ Y Sbjct: 53 GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLY 108
>Y389_CLOPE (P30818) Putative amino acid transporter CPE0389| Length = 481 Score = 30.8 bits (68), Expect = 2.5 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = +1 Query: 220 VITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYR-----SDDAVAG 384 VI+A++G GV +LP ++AQ A +L+ +IT + + +R DA G Sbjct: 16 VISAMLGGGVYNLPQNMAQ---SASAGAILISWIITGIGIWFIANTFRILAAARPDATTG 72 Query: 385 KRNYTYMD-AVGSLLGKGQVWFCGLCQYVSLVGTAI 489 YTY + G G W +C + VG A+ Sbjct: 73 --IYTYGELGFGKFTGFLMAWGYWICNSFANVGYAV 106
>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)| (MtLAX3) Length = 465 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY---- 360 G+V+ A + + +L+LP+S +QLG ++G + + L+ +T+ ++ Y Sbjct: 39 GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYR 98 Query: 361 -RSDDAVAGKRNYT--YMDAVGSLLGK 432 R + RN+ + + + LLGK Sbjct: 99 TRKEREKVDFRNHVIQWFEVLDGLLGK 125
>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)| Length = 483 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY---- 360 G+ + A + + +L+LP+S +QLG ++G L + ++ +T+ L+ Y Sbjct: 40 GSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYR 99 Query: 361 -RSDDAVAGKRNYT--YMDAVGSLLGK 432 R + RN+ + + + LLGK Sbjct: 100 TRKEREKVNFRNHVIQWFEVLDGLLGK 126
>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3| Length = 547 Score = 30.0 bits (66), Expect = 4.3 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 7/87 (8%) Frame = +1 Query: 193 GTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY---- 360 G+ + A + + +L+LP+S AQLG +G L + L+ +T+ L+ Y Sbjct: 61 GSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTAYLISILYLEYR 120 Query: 361 -RSDDAVAGKRNYT--YMDAVGSLLGK 432 R + RN+ + + + LLG+ Sbjct: 121 TRKERDKVDFRNHVIQWFEVLDGLLGR 147
>LNT_SALTY (O87576) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) (Copper homeostasis protein cutE) Length = 512 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 232 VIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351 + GSG+ + S+AQ G + GP + L L+ Y S+ G Sbjct: 67 LFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTG 106
>LNT_SALTI (Q8Z8G7) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) (Copper homeostasis protein cutE) Length = 512 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 232 VIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351 + GSG+ + S+AQ G + GP + L L+ Y S+ G Sbjct: 67 LFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTG 106
>CHDH_HUMAN (Q8NE62) Choline dehydrogenase, mitochondrial precursor (EC| 1.1.99.1) (CHD) (CDH) Length = 594 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 308 RSVAGPATHPSCATDQGSDSTPEPITAVITRALAVHTVPVL 186 R+ A A HPSC G S P + TR L V + V+ Sbjct: 503 RAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVV 543
>PCBB_PROMM (Q7V6U4) Divinyl chlorophyll a/b light-harvesting protein pcbB| Length = 350 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Frame = +1 Query: 190 TGTVW---TASARVITAVIGSGVLS----LPWSVAQLGWVAGPATLLLFALITYYTSVLL 348 +G +W T A T G G+LS L W++A +GW+A A + T Y Sbjct: 215 SGGLWHIVTKQAGEYTTFKGKGILSAEAQLSWALAGVGWMALVAAFWCASNTTIYPDTFF 274 Query: 349 GD 354 G+ Sbjct: 275 GE 276
>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)| (MtLAX5) Length = 490 Score = 29.3 bits (64), Expect = 7.3 Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Frame = +1 Query: 115 AGDLRRRVIAAADDYSLDDDGKPRRT------------GTVWTASARVITAVIGSGVLSL 258 A D + + ++ +GKP + G+ + A + + +L+L Sbjct: 4 ANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLTL 63 Query: 259 PWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY-----RSDDAVAGKRNYT--YMDAVG 417 P+S +QLG ++G L + ++ +T+ L+ Y R + R++ + + + Sbjct: 64 PYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLD 123 Query: 418 SLLGK 432 LLGK Sbjct: 124 GLLGK 128
>TCMR_STRGA (P39885) HTH-type transcriptional regulator tcmR (Tetracenomycin C| transcriptional repressor) Length = 226 Score = 29.3 bits (64), Expect = 7.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 133 RVIAAADDYSLDDDGKPRRTGTVWTASARVIT 228 R+IAA + LDDD +PR V+ A RV++ Sbjct: 157 RIIAAREGVDLDDDFRPRFIVAVFKAVGRVVS 188
>AVT3_YEAST (P36062) Vacuolar amino acid transporter 3| Length = 692 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 181 PRRTGTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITY 330 P ++ TV A ++ + +G+GVL LP + GW LL ALI+Y Sbjct: 294 PHKSSTV-KAVLLLLKSFVGTGVLFLPKAFHNGGWGFSALCLLSCALISY 342
>TUTB_ENTAG (Q47825) Tyrosine permease| Length = 416 Score = 29.3 bits (64), Expect = 7.3 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = +1 Query: 184 RRTGTVWTASARVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLL 348 + T + + + +I VIG G+ SLP ++A + + L L A++ T ++L Sbjct: 5 KTTPGLMSGTMLIIATVIGGGMFSLPIAMAGIWFPGASIILTLIAIMMLLTGLML 59
>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan| resistance protein) Length = 470 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 220 VITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351 +I I G LSLP + A LG V G + LI YT+ ++G Sbjct: 62 LIVEAIALGSLSLPGAFATLGMVPGVILSVGMGLICIYTAHVIG 105
>YCFZ_ECOLI (P75961) Inner membrane protein ycfZ| Length = 262 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 259 PWSVAQLGWVAGPATLLLFALITYYTS 339 P S LG++A AT +LF+ I YYT+ Sbjct: 178 PGSTNTLGFIAWAATFILFSRIFYYTT 204
>YHJV_ECOLI (P37660) Inner membrane transport protein yhjV| Length = 423 Score = 28.9 bits (63), Expect = 9.5 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%) Frame = +1 Query: 223 ITAVIGSGVLSLPWSVAQLG-WVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKRNYT 399 I IG+G + +P + G WV + A+I Y + ++ D Y + + N Sbjct: 27 IGMAIGAGTVLMPVQIGLKGIWV-----FITAAIIAYPATWVVQDIYLKTLSESDSCN-D 80 Query: 400 YMDAVGSLLGKGQVWFCGLCQYVSLVGTAIGYTITASISAAA 525 Y D + LGK F G+ ++ ++ Y+++ +A+ Sbjct: 81 YTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSAS 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,197,678 Number of Sequences: 219361 Number of extensions: 698552 Number of successful extensions: 2920 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2866 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2920 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
