ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart37e01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 293 bits (148), Expect = 3e-76 Identities = 309/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 166 gacgacgacggcaagcccaggaggacagggacggtgtggacggcgagcgcgcgcgtgatc 225 ||||||||||| ||||||| | | ||||| |||| ||||||||||||||||| | | || Sbjct: 225 gacgacgacgggaagcccaagcgaacaggaacggagtggacggcgagcgcgcacatcgtc 284 Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| ||| Sbjct: 285 acggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcgcagctcggctgg 344 Query: 286 gtcgccgggcccgccacgctcctcctcttcgccctcatcacctactacacctccgtgctc 345 |||||||| || ||||| ||| || | ||||| |||||||||||||||||||||||||| Sbjct: 345 gtcgccggcccggccaccctcgtcgtgttcgcggtcatcacctactacacctccgtgctc 404 Query: 346 ctcggcgactgctaccg---cagcgacgacgccgtcgccgggaaaaggaactacacctac 402 |||| |||||||||||| | ||| ||| ||| ||||||| ||||||||||| ||| Sbjct: 405 ctcgccgactgctaccgcgccggcggcgatcaggtctccgggaagaggaactacacatac 464 Query: 403 atggacgccgtcgggtccctcctaggtaaagggcaggtgtggttttgtggcctctgtcag 462 ||||||||||||| |||| |||||| |||| |||||||| ||||| ||||||||| Sbjct: 465 atggacgccgtcgagtcctatctaggtggtcggcaagtgtggttctgtggtctctgtcag 524 Query: 463 tacgtcagtcttgttgggactgcaatcgggtacaccatcacagcatccatcagtgccgcg 522 ||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 tacgttaacctggttggaactgcaatcgggtacaccatcacagcatccatcagtgccgcg 584 Query: 523 gc 524 || Sbjct: 585 gc 586
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 188 bits (95), Expect = 1e-44 Identities = 199/233 (85%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||| |||| ||||||||||||||||| | | ||||||||||| ||||||||||||||| Sbjct: 6695486 caggaacggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgc 6695427 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| | |||||| |||||||||||| ||||||||||| || ||||| ||| || Sbjct: 6695426 tgtcgctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcg 6695367 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccg---cagcg 367 | ||||| |||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 6695366 tgttcgcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 6695307 Query: 368 acgacgccgtcgccgggaaaaggaactacacctacatggacgccgtcgggtcc 420 ||| ||| ||||||| ||||||||||| |||||||||||||||| |||| Sbjct: 6695306 gcgatcaggtctccgggaagaggaactacacatacatggacgccgtcgagtcc 6695254 Score = 129 bits (65), Expect = 1e-26 Identities = 146/173 (84%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| |||| | | ||||||||||||||||| |||||||||| Sbjct: 20864106 cagggacggtgtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgc 20864165 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| | ||| | |||||||||| || ||||| || || ||| ||| ||||||| Sbjct: 20864166 tgtcgctggcgtgggcgatggcgcagctggggtgggtggctggccccatcaccctcctcc 20864225 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgc 363 |||||||| |||||||| |||||||| || |||||| ||||||||||||| Sbjct: 20864226 tcttcgccgccatcaccttctacacctgcggcctcctctccgactgctaccgc 20864278 Score = 117 bits (59), Expect = 4e-23 Identities = 137/163 (84%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||||||||||||||||||||||||||| || || | Sbjct: 20841850 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 20841909 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | |||||||||||| ||||| | |||||| | || || | |||||||||||| Sbjct: 20841910 tgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctc 20841969 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgca 364 ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct: 20841970 atcacgtactacacctctgggctcctcgccgactgctaccgca 20842012 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 434 ggcaggtgtggttttgtggcctctgtcagtacgtcagtcttgttgggactgcaatcgggt 493 |||| |||||||| ||||| |||||||||||||| | || ||||| ||||||||||||| Sbjct: 6695127 ggcaagtgtggttctgtggtctctgtcagtacgttaacctggttggaactgcaatcgggt 6695068 Query: 494 acaccatcacagcatccatcagtgccgcg 522 ||||||||||||||||||||||||||||| Sbjct: 6695067 acaccatcacagcatccatcagtgccgcg 6695039 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 475 gttgggactgcaatcgggtacaccatcacagcatccatcag 515 |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 20842482 gttgggacagcaattgggtacacaatcacagcatccatcag 20842522 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 323 tcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 ||||||||||| |||| | ||||||| ||||||||||||| ||||||| Sbjct: 6705568 tcacctactactcctcggccctcctcgccgactgctaccgcgacgacgac 6705519
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 188 bits (95), Expect = 1e-44 Identities = 199/233 (85%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||| |||| ||||||||||||||||| | | ||||||||||| ||||||||||||||| Sbjct: 129612 caggaacggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgc 129553 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| | |||||| |||||||||||| ||||||||||| || ||||| ||| || Sbjct: 129552 tgtcgctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcg 129493 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccg---cagcg 367 | ||||| |||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 129492 tgttcgcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 129433 Query: 368 acgacgccgtcgccgggaaaaggaactacacctacatggacgccgtcgggtcc 420 ||| ||| ||||||| ||||||||||| |||||||||||||||| |||| Sbjct: 129432 gcgatcaggtctccgggaagaggaactacacatacatggacgccgtcgagtcc 129380 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 434 ggcaggtgtggttttgtggcctctgtcagtacgtcagtcttgttgggactgcaatcgggt 493 |||| |||||||| ||||| |||||||||||||| | || ||||| ||||||||||||| Sbjct: 129253 ggcaagtgtggttctgtggtctctgtcagtacgttaacctggttggaactgcaatcgggt 129194 Query: 494 acaccatcacagcatccatcagtgccgcg 522 ||||||||||||||||||||||||||||| Sbjct: 129193 acaccatcacagcatccatcagtgccgcg 129165 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 323 tcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 ||||||||||| |||| | ||||||| ||||||||||||| ||||||| Sbjct: 139694 tcacctactactcctcggccctcctcgccgactgctaccgcgacgacgac 139645
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 188 bits (95), Expect = 1e-44 Identities = 199/233 (85%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||| |||| ||||||||||||||||| | | ||||||||||| ||||||||||||||| Sbjct: 25165 caggaacggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgc 25106 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| | |||||| |||||||||||| ||||||||||| || ||||| ||| || Sbjct: 25105 tgtcgctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcg 25046 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccg---cagcg 367 | ||||| |||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 25045 tgttcgcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 24986 Query: 368 acgacgccgtcgccgggaaaaggaactacacctacatggacgccgtcgggtcc 420 ||| ||| ||||||| ||||||||||| |||||||||||||||| |||| Sbjct: 24985 gcgatcaggtctccgggaagaggaactacacatacatggacgccgtcgagtcc 24933 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 434 ggcaggtgtggttttgtggcctctgtcagtacgtcagtcttgttgggactgcaatcgggt 493 |||| |||||||| ||||| |||||||||||||| | || ||||| ||||||||||||| Sbjct: 24806 ggcaagtgtggttctgtggtctctgtcagtacgttaacctggttggaactgcaatcgggt 24747 Query: 494 acaccatcacagcatccatcagtgccgcg 522 ||||||||||||||||||||||||||||| Sbjct: 24746 acaccatcacagcatccatcagtgccgcg 24718 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 323 tcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 ||||||||||| |||| | ||||||| ||||||||||||| ||||||| Sbjct: 35247 tcacctactactcctcggccctcctcgccgactgctaccgcgacgacgac 35198
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 141 bits (71), Expect = 3e-30 Identities = 187/223 (83%), Gaps = 2/223 (0%) Strand = Plus / Minus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 61836 gggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 61777 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| | ||| | | ||||||||||| ||||| ||||| |||||| | || ||| Sbjct: 61776 tcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctc 61717 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 |||||| || ||| ||||||||||||| ||| |||| ||| ||||||||| || |||| Sbjct: 61716 ttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgac 61657 Query: 373 gccgt-cgccgggaaaaggaactacacctacatggacgccgtc 414 |||| | |||| || | |||||||||||||||||||||||| Sbjct: 61656 -ccgtgcaccggcaagcgcaactacacctacatggacgccgtc 61615
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 141 bits (71), Expect = 3e-30 Identities = 187/223 (83%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 4769838 gggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 4769897 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| | ||| | | ||||||||||| ||||| ||||| |||||| | || ||| Sbjct: 4769898 tcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctc 4769957 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 |||||| || ||| ||||||||||||| ||| |||| ||| ||||||||| || |||| Sbjct: 4769958 ttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgac 4770017 Query: 373 gccgt-cgccgggaaaaggaactacacctacatggacgccgtc 414 |||| | |||| || | |||||||||||||||||||||||| Sbjct: 4770018 -ccgtgcaccggcaagcgcaactacacctacatggacgccgtc 4770059 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactact 160 |||||||||||||||||||| Sbjct: 23955053 cgccgccgccgacgactact 23955034
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 185/223 (82%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct: 38305501 cagggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgc 38305442 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| ||| || | ||||||||||| ||||| |||||||| || | | | Sbjct: 38305441 tgtcgctggggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgc 38305382 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacg 370 ||||| ||||| |||||||||||||||| |||||| ||| ||||||||| || || Sbjct: 38305381 tcttctccctcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 38305322 Query: 371 acgccgtcgccgggaaaaggaactacacctacatggacgccgt 413 || ||||| |||| || ||||||||||||||||||||||||| Sbjct: 38305321 accccgtcaccggcaagcggaactacacctacatggacgccgt 38305279 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||||| |||||||||| |||| | | | ||||||||||||||||||||||||| Sbjct: 38113372 cagggacggtatggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgc 38113313 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcc 296 || ||||| | ||| |||||||||||| || ||||| |||||||| Sbjct: 38113312 tggcgctggcgtggagcgtggcgcagctgggttgggtggccgggcc 38113267 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 38128408 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 38128350 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 38128349 acggcaagcggaactacacctacatggacgtcgtc 38128315
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 141 bits (71), Expect = 3e-30 Identities = 185/223 (82%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct: 66326 cagggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgc 66267 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| ||| || | ||||||||||| ||||| |||||||| || | | | Sbjct: 66266 tgtcgctggggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgc 66207 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacg 370 ||||| ||||| |||||||||||||||| |||||| ||| ||||||||| || || Sbjct: 66206 tcttctccctcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 66147 Query: 371 acgccgtcgccgggaaaaggaactacacctacatggacgccgt 413 || ||||| |||| || ||||||||||||||||||||||||| Sbjct: 66146 accccgtcaccggcaagcggaactacacctacatggacgccgt 66104
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 141 bits (71), Expect = 3e-30 Identities = 187/223 (83%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 224 gggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 283 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| | ||| | | ||||||||||| ||||| ||||| |||||| | || ||| Sbjct: 284 tcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctc 343 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 |||||| || ||| ||||||||||||| ||| |||| ||| ||||||||| || |||| Sbjct: 344 ttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgac 403 Query: 373 gccgt-cgccgggaaaaggaactacacctacatggacgccgtc 414 |||| | |||| || | |||||||||||||||||||||||| Sbjct: 404 -ccgtgcaccggcaagcgcaactacacctacatggacgccgtc 445
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 141 bits (71), Expect = 3e-30 Identities = 187/223 (83%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 211 gggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 270 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| | ||| | | ||||||||||| ||||| ||||| |||||| | || ||| Sbjct: 271 tcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctc 330 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 |||||| || ||| ||||||||||||| ||| |||| ||| ||||||||| || |||| Sbjct: 331 ttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgac 390 Query: 373 gccgt-cgccgggaaaaggaactacacctacatggacgccgtc 414 |||| | |||| || | |||||||||||||||||||||||| Sbjct: 391 -ccgtgcaccggcaagcgcaactacacctacatggacgccgtc 432
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 141 bits (71), Expect = 3e-30 Identities = 187/223 (83%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 4788622 gggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 4788681 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| | ||| | | ||||||||||| ||||| ||||| |||||| | || ||| Sbjct: 4788682 tcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctc 4788741 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 |||||| || ||| ||||||||||||| ||| |||| ||| ||||||||| || |||| Sbjct: 4788742 ttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgac 4788801 Query: 373 gccgt-cgccgggaaaaggaactacacctacatggacgccgtc 414 |||| | |||| || | |||||||||||||||||||||||| Sbjct: 4788802 -ccgtgcaccggcaagcgcaactacacctacatggacgccgtc 4788843 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactact 160 |||||||||||||||||||| Sbjct: 24266722 cgccgccgccgacgactact 24266703
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Plus Query: 164 tcgacgacgacggcaagcccaggaggacagggacggtgtggacggcgagcgcgcgcgtga 223 |||||||||||||| |||||| | | |||||| |||||||||||||||||| | | | Sbjct: 98 tcgacgacgacggccgccccaggcgcaacgggacgatgtggacggcgagcgcgcacatca 157 Query: 224 tcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggat 283 ||||||||||||||||||||||||||||||||||| ||| || | ||||||||||| | Sbjct: 158 tcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcgcagctcggct 217 Query: 284 gggtcgccgggcccgccacgctcctcctcttcgccctcatcacctactacacctccgtgc 343 |||| |||||||| || | | |||||| ||||| |||||||||||||||| | Sbjct: 218 gggtggccgggccggcggtcatggtgctcttctccctcgtcacctactacacctcatccc 277 Query: 344 tcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctaca 403 ||||| ||| ||||||||| || |||| ||||| |||| || ||||||||||||||| Sbjct: 278 tcctctccgattgctaccgctccggcgaccccgtcaccggcaagcggaactacacctaca 337 Query: 404 tggacgccgt 413 |||||||||| Sbjct: 338 tggacgccgt 347
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Plus Query: 164 tcgacgacgacggcaagcccaggaggacagggacggtgtggacggcgagcgcgcgcgtga 223 |||||||||||||| |||||| | | |||||| |||||||||||||||||| | | | Sbjct: 258 tcgacgacgacggccgccccaggcgcaacgggacgatgtggacggcgagcgcgcacatca 317 Query: 224 tcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggat 283 ||||||||||||||||||||||||||||||||||| ||| || | ||||||||||| | Sbjct: 318 tcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcgcagctcggct 377 Query: 284 gggtcgccgggcccgccacgctcctcctcttcgccctcatcacctactacacctccgtgc 343 |||| |||||||| || | | |||||| ||||| |||||||||||||||| | Sbjct: 378 gggtggccgggccggcggtcatggtgctcttctccctcgtcacctactacacctcatccc 437 Query: 344 tcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctaca 403 ||||| ||| ||||||||| || |||| ||||| |||| || ||||||||||||||| Sbjct: 438 tcctctccgattgctaccgctccggcgaccccgtcaccggcaagcggaactacacctaca 497 Query: 404 tggacgccgt 413 |||||||||| Sbjct: 498 tggacgccgt 507
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 129 bits (65), Expect = 1e-26 Identities = 146/173 (84%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| |||| | | ||||||||||||||||| |||||||||| Sbjct: 118781 cagggacggtgtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgc 118840 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcc 310 |||||||| | ||| | |||||||||| || ||||| || || ||| ||| ||||||| Sbjct: 118841 tgtcgctggcgtgggcgatggcgcagctggggtgggtggctggccccatcaccctcctcc 118900 Query: 311 tcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgc 363 |||||||| |||||||| |||||||| || |||||| ||||||||||||| Sbjct: 118901 tcttcgccgccatcaccttctacacctgcggcctcctctccgactgctaccgc 118953 Score = 117 bits (59), Expect = 4e-23 Identities = 137/163 (84%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||||||||||||||||||||||||||| || || | Sbjct: 96525 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 96584 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | |||||||||||| ||||| | |||||| | || || | |||||||||||| Sbjct: 96585 tgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctc 96644 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgca 364 ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct: 96645 atcacgtactacacctctgggctcctcgccgactgctaccgca 96687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 475 gttgggactgcaatcgggtacaccatcacagcatccatcag 515 |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 97157 gttgggacagcaattgggtacacaatcacagcatccatcag 97197
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 123 bits (62), Expect = 6e-25 Identities = 182/222 (81%) Strand = Plus / Plus Query: 192 agggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgct 251 ||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||||| Sbjct: 57186 agggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgct 57245 Query: 252 gtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcct 311 ||||||| ||| | | |||||||| || ||||| ||||| |||||| | || || Sbjct: 57246 gtcgctggggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgct 57305 Query: 312 cttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacga 371 |||| | || |||||||||||||||||| ||| |||| ||||||||||||| || ||| Sbjct: 57306 cttctcgttcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcga 57365 Query: 372 cgccgtcgccgggaaaaggaactacacctacatggacgccgt 413 || | |||| || | ||||||||||||||||||||||| Sbjct: 57366 cgagagcaccggcaagcgcaactacacctacatggacgccgt 57407
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 123 bits (62), Expect = 6e-25 Identities = 182/222 (81%) Strand = Plus / Plus Query: 192 agggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgct 251 ||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||||| Sbjct: 20635146 agggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgct 20635205 Query: 252 gtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcct 311 ||||||| ||| | | |||||||| || ||||| ||||| |||||| | || || Sbjct: 20635206 gtcgctggggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgct 20635265 Query: 312 cttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacga 371 |||| | || |||||||||||||||||| ||| |||| ||||||||||||| || ||| Sbjct: 20635266 cttctcgttcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcga 20635325 Query: 372 cgccgtcgccgggaaaaggaactacacctacatggacgccgt 413 || | |||| || | ||||||||||||||||||||||| Sbjct: 20635326 cgagagcaccggcaagcgcaactacacctacatggacgccgt 20635367 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||||| Sbjct: 744560 acggcggtgatcggctccggcgtgctg 744586 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ggtcatcgccgccgccgacgac 156 |||||||||||||||||||||| Sbjct: 17614068 ggtcatcgccgccgccgacgac 17614089 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 7208517 gtcatcgccgccgccgacgac 7208497 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 acgctcctcctcttcgccctcatc 324 |||||||||||| ||||||||||| Sbjct: 16710602 acgctcctcctcctcgccctcatc 16710625
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 121 bits (61), Expect = 2e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 |||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 244 gggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctg 303 Query: 253 tcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctc 312 |||||| ||| | | |||||||| || ||||| ||||| |||||| | || ||| Sbjct: 304 tcgctggggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctc 363 Query: 313 ttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 ||| | || |||||||||||||||||| ||| |||| ||||||||||||| || |||| Sbjct: 364 ttctcgttcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcgac 423 Query: 373 gccgtcgccgggaaaaggaactacacctacatggacgccgt 413 | | |||| || | ||||||||||||||||||||||| Sbjct: 424 gagagcaccggcaagcgcaactacacctacatggacgccgt 464
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 4145437 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 4145378 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 4145377 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 4145318 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 4145317 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 4145258 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 4145257 ggcaagcgcaactacacctacatggacgccgt 4145226 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 4120144 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 4120203 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 4120204 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 4120263 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 4120264 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 4120323 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 4120324 ggcaagcgaaactacacctacatggacgccgt 4120355 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 4893450 tggacggcgagcgcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccg 4893391 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgcc 300 ||| | |||||||||||| ||||||| |||||||||| Sbjct: 4893390 tgggcgacggcgcagctcgggtgggtcggcgggcccgcc 4893352 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||| | ||| | ||| |||||||||||| || ||| Sbjct: 5410933 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410874 Query: 286 gtcgccgggcc 296 || || ||||| Sbjct: 5410873 gtggctgggcc 5410863 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| ||| | | | |||||||| ||||||||||||||| Sbjct: 4880758 cagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgc 4880817 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggt 287 || ||||| | ||| | ||||||||||| || ||||| Sbjct: 4880818 tggcgctggcgtggacggtggcgcagctggggtgggt 4880854 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 23921427 gtcatcgccgccgccgacgac 23921447 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 5568277 cgccgcgctcctcctcttcgtcctcatc 5568304
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 210 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 269 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 270 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 329 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 330 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 389 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 390 ggcaagcgaaactacacctacatggacgccgt 421
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 188 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 247 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 248 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 307 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 308 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 367 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 368 ggcaagcgcaactacacctacatggacgccgt 399
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 213 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 272 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 273 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 332 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 333 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 392 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 393 ggcaagcgaaactacacctacatggacgccgt 424
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 190 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 249 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 250 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 309 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 310 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 369 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 370 ggcaagcgcaactacacctacatggacgccgt 401
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 211 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 270 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 271 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 330 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 331 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 390 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 391 ggcaagcgaaactacacctacatggacgccgt 422
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 4145424 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 4145365 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 4145364 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 4145305 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 4145304 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 4145245 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 4145244 ggcaagcgcaactacacctacatggacgccgt 4145213 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 4120131 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 4120190 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 4120191 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 4120250 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 4120251 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 4120310 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 4120311 ggcaagcgaaactacacctacatggacgccgt 4120342 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 4893432 tggacggcgagcgcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccg 4893373 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgcc 300 ||| | |||||||||||| ||||||| |||||||||| Sbjct: 4893372 tgggcgacggcgcagctcgggtgggtcggcgggcccgcc 4893334 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||| | ||| | ||| |||||||||||| || ||| Sbjct: 5410922 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410863 Query: 286 gtcgccgggcc 296 || || ||||| Sbjct: 5410862 gtggctgggcc 5410852 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| ||| | | | |||||||| ||||||||||||||| Sbjct: 4880740 cagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgc 4880799 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggt 287 || ||||| | ||| | ||||||||||| || ||||| Sbjct: 4880800 tggcgctggcgtggacggtggcgcagctggggtgggt 4880836 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 23849633 gtcatcgccgccgccgacgac 23849653 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 5568266 cgccgcgctcctcctcttcgtcctcatc 5568293
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 87833 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 87774 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 87773 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 87714 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 87713 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 87654 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 87653 ggcaagcgcaactacacctacatggacgccgt 87622 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 62540 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 62599 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 62600 tgggcgatcgcgcagctgggctgggtggccggtcccgccgtgatgctcctcttcgccttc 62659 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 62660 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgacccggccacc 62719 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | ||||||||||||||||||||||| Sbjct: 62720 ggcaagcgaaactacacctacatggacgccgt 62751
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 117 bits (59), Expect = 4e-23 Identities = 137/163 (84%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||||||||||||||||||||||||||| || || | Sbjct: 229 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 288 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | |||||||||||| ||||| | |||||| | || || | |||||||||||| Sbjct: 289 tgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctc 348 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgca 364 ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct: 349 atcacgtactacacctctgggctcctcgccgactgctaccgca 391 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 475 gttgggactgcaatcgggtacaccatcacagcatccatcagtgccgcggct 525 |||||||| ||||| |||||||| ||||||||||||||||| || |||||| Sbjct: 502 gttgggacagcaattgggtacacaatcacagcatccatcagcgcagcggct 552
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 111 bits (56), Expect = 2e-21 Identities = 173/212 (81%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || || |||||||||||||||||||||||| | Sbjct: 188 tggacggcgagcgcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcg 247 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | | |||||||| || ||||| ||||| |||||| | | |||||||||||| || Sbjct: 248 tgggcgatcgcgcagctgggctgggtggccggccccgccgtgatgctcctcttcgccttc 307 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgcc 381 ||| ||||||||||||| ||||||| ||| |||||||||| || |||| | | | || Sbjct: 308 gtcatctactacacctccaccctcctcgccgagtgctaccgcaccggcgaccctgccacc 367 Query: 382 gggaaaaggaactacacctacatggacgccgt 413 || || | |||||||||||||| |||||||| Sbjct: 368 ggcaagcgcaactacacctacattgacgccgt 399
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 109 bits (55), Expect = 9e-21 Identities = 136/163 (83%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||||||||||||||||||||||||||| || || | Sbjct: 226 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 285 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctc 321 ||| | |||||||||||| ||||| | |||||| | || || | |||||||||||| Sbjct: 286 tgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctc 345 Query: 322 atcacctactacacctccgtgctcctcggcgactgctaccgca 364 ||||| |||||| |||| | |||||||| |||||||||||||| Sbjct: 346 atcacgtactacgcctctgggctcctcgccgactgctaccgca 388 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 475 gttgggactgcaatcgggtacaccatcacagcatccatcagtgccgcggct 525 |||||||| ||||| |||||||| ||||||||||||||||| || |||||| Sbjct: 499 gttgggacagcaattgggtacacaatcacagcatccatcagcgcagcggct 549
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 200 tgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgc 259 |||||||||||||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 107 tgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctgg 166 Query: 260 cctggtccgtggcgcagctcggatgggtcgccgggcccgc 299 | ||| ||| |||||||| || ||||| ||||| ||||| Sbjct: 167 cgtggggcgtcgcgcagctggggtgggtggccggccccgc 206
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 200 tgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgc 259 |||||||||||||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 69435 tgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctgg 69494 Query: 260 cctggtccgtggcgcagctcggatgggtcgccgggcccgc 299 | ||| ||| |||||||| || ||||| ||||| ||||| Sbjct: 69495 cgtggggcgtcgcgcagctggggtgggtggccggccccgc 69534
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 200 tgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgc 259 |||||||||||||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 24509804 tgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctgg 24509863 Query: 260 cctggtccgtggcgcagctcggatgggtcgccgggcccgc 299 | ||| ||| |||||||| || ||||| ||||| ||||| Sbjct: 24509864 cgtggggcgtcgcgcagctggggtgggtggccggccccgc 24509903 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||| |||||||||| |||| ||||||||||||||||||||| ||||| |||| Sbjct: 23497997 cagggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgc 23497938 Query: 251 tgtcgctgccctggtccgtggcgcagct 278 |||||||| | ||| |||||||||||| Sbjct: 23497937 tgtcgctggcgtggagcgtggcgcagct 23497910 Score = 60.0 bits (30), Expect = 8e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 191 cagggacggtgtggacg-gcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||||||||||| ||| | |||| | | ||||||||||||||||| ||||| ||| Sbjct: 23490529 cagggacggtgtggacgtgcgtg-gcgcacatcatcacggcggtgatcgggtccggggtg 23490471 Query: 250 ctgtcgctgccctggtccgtggcgcagctcggatgggt 287 ||||||||| | ||| ||||||| |||| || ||||| Sbjct: 23490470 ctgtcgctggcgtggagcgtggcgaagctggggtgggt 23490433 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcgga 282 ||||| ||||||||||| | |||||||||| ||||| | ||| ||| ||||||||||| Sbjct: 33695975 atcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcgcagctcggc 33696034 Query: 283 tgggtcgccgg 293 ||||| ||||| Sbjct: 33696035 tgggtggccgg 33696045 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 aggaactacacctacatggacgccgtc 414 ||||||||| ||||||||||||||||| Sbjct: 33696140 aggaactactcctacatggacgccgtc 33696166 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 acgactactccctcgacgacgacg 175 ||||| |||||||||||||||||| Sbjct: 12590476 acgacgactccctcgacgacgacg 12590453 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tcatcgccgccgccgacgac 156 |||||||||||||||||||| Sbjct: 1009550 tcatcgccgccgccgacgac 1009569
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 200 tgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgc 259 |||||||||||||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 103126 tgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctgg 103185 Query: 260 cctggtccgtggcgcagctcggatgggtcgccgggcccgc 299 | ||| ||| |||||||| || ||||| ||||| ||||| Sbjct: 103186 cgtggggcgtcgcgcagctggggtgggtggccggccccgc 103225
>ref|NM_190137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 89.7 bits (45), Expect = 9e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 188 ggacagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcg 247 ||||||||||||| |||||||||| |||| | | | |||||||||||||||||||||| Sbjct: 50 ggacagggacggtatggacggcgacggcgcacattgttacggcggtgatcggctccggcg 109 Query: 248 tgctgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcc 296 ||||| ||||| | ||| |||||||||||| || ||||| |||||||| Sbjct: 110 tgctggcgctggcgtggagcgtggcgcagctgggttgggtggccgggcc 158
>dbj|AK073884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073B17, full insert sequence Length = 1762 Score = 89.7 bits (45), Expect = 9e-15 Identities = 93/109 (85%) Strand = Plus / Plus Query: 188 ggacagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcg 247 ||||||||||||| |||||||||| |||| | | | |||||||||||||||||||||| Sbjct: 126 ggacagggacggtatggacggcgacggcgcacattgttacggcggtgatcggctccggcg 185 Query: 248 tgctgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcc 296 ||||| ||||| | ||| |||||||||||| || ||||| |||||||| Sbjct: 186 tgctggcgctggcgtggagcgtggcgcagctgggttgggtggccgggcc 234
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||| Sbjct: 75 acggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgg 134 Query: 286 gtcg 289 |||| Sbjct: 135 gtcg 138
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||| Sbjct: 30011945 acggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgg 30012004 Query: 286 gtcg 289 |||| Sbjct: 30012005 gtcg 30012008 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 343 ctcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctac 402 ||||||| |||||||||||||| || |||| ||| | |||| | |||||||||||||||| Sbjct: 120154 ctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctac 120213 Query: 403 atggacgccgtc 414 |||||||||||| Sbjct: 120214 atggacgccgtc 120225 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcg-cgcgcgtgatcacggcggtgatcggctccggcgtgct 251 |||||||||||||||||| ||| ||| | | ||||||||||||||||| || || ||||| Sbjct: 120004 gggacggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgct 120062 Query: 252 gtcgctg 258 ||||||| Sbjct: 120063 gtcgctg 120069
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||| Sbjct: 112221 acggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgg 112280 Query: 286 gtcg 289 |||| Sbjct: 112281 gtcg 112284
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||| Sbjct: 75 acggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtggcgcagctcggctgg 134 Query: 286 gtcg 289 |||| Sbjct: 135 gtcg 138
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 323 tcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgccgtcgccg 382 ||||||||| ||||||| ||||||| |||||||||||||| || |||| ||| | ||| Sbjct: 470 tcacctacttcacctccaacctcctcgccgactgctaccgcaccggcgaccccgccaccg 529 Query: 383 ggaaaaggaactacacctacatggacgccgtc 414 | | |||||||||||||||||||||||||||| Sbjct: 530 gcagaaggaactacacctacatggacgccgtc 561 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcg-cgcgcgtgatcacggcggtgatcggctccggcgtgct 251 |||||||||||||||||| ||| ||| | | ||||||||||||||||| || || ||||| Sbjct: 340 gggacggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgct 398 Query: 252 gtcgctg 258 ||||||| Sbjct: 399 gtcgctg 405
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||| |||||||||| |||| ||||||||||||||||||||| ||||| |||| Sbjct: 53900 cagggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgc 53841 Query: 251 tgtcgctgccctggtccgtggcgcagct 278 |||||||| | ||| |||||||||||| Sbjct: 53840 tgtcgctggcgtggagcgtggcgcagct 53813 Score = 60.0 bits (30), Expect = 8e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 191 cagggacggtgtggacg-gcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||||||||||| ||| | |||| | | ||||||||||||||||| ||||| ||| Sbjct: 46432 cagggacggtgtggacgtgcgtg-gcgcacatcatcacggcggtgatcgggtccggggtg 46374 Query: 250 ctgtcgctgccctggtccgtggcgcagctcggatgggt 287 ||||||||| | ||| ||||||| |||| || ||||| Sbjct: 46373 ctgtcgctggcgtggagcgtggcgaagctggggtgggt 46336
>gb|BT009014.1| Triticum aestivum clone wdk3c.pk006.d6:fis, full insert mRNA sequence Length = 1785 Score = 85.7 bits (43), Expect = 1e-13 Identities = 175/219 (79%) Strand = Plus / Plus Query: 196 acggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcg 255 |||||||||||||||||||| | | | ||||| || || |||||||| ||||| || ||| Sbjct: 208 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctcgggcgtcctctcg 267 Query: 256 ctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttc 315 ||| | ||| || | || |||||||| ||||| || || ||||||| | ||||| ||| Sbjct: 268 ctggcgtgggccatcgcccagctcggctgggtggcgggccccgccatcatgctcctgttc 327 Query: 316 gccctcatcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgacgcc 375 || ||| ||| ||||||||||||| |||||||| ||| ||||||||| || |||| | Sbjct: 328 gcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcgacccg 387 Query: 376 gtcgccgggaaaaggaactacacctacatggacgccgtc 414 | |||| || | |||||||||||||||||||||||| Sbjct: 388 gagaccggcaagcgcaactacacctacatggacgccgtc 426
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 44972 tggacggcgagcgcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccg 45031 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgcc 300 ||| | |||||||||||| ||||||| |||||||||| Sbjct: 45032 tgggcgacggcgcagctcgggtgggtcggcgggcccgcc 45070 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| ||| | | | |||||||| ||||||||||||||| Sbjct: 57664 cagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgc 57605 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggt 287 || ||||| | ||| | ||||||||||| || ||||| Sbjct: 57604 tggcgctggcgtggacggtggcgcagctggggtgggt 57568
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 85.7 bits (43), Expect = 1e-13 Identities = 142/175 (81%) Strand = Plus / Plus Query: 190 acagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 |||||||||||||||||||||| ||| || ||||| || ||||| |||||||||||| Sbjct: 113 acagggacggtgtggacggcgacgacgcacgccatcaccgccgtgataggctccggcgtg 172 Query: 250 ctgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcccgccacgctcctc 309 ||| ||||||||||| |||||||||| | || |||||| ||| |||| | | ||| || Sbjct: 173 ctggcgctgccctggagcgtggcgcagatgggctgggtcctcggccccgtcgccctcgtc 232 Query: 310 ctcttcgccctcatcacctactacacctccgtgctcctcggcgactgctaccgca 364 || |||| ||||||||||| |||| |||| ||||| |||||||||||||| Sbjct: 233 ggctgcgcctacatcacctacttcaccgccgtcctcctgtccgactgctaccgca 287
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcgctgccc 261 |||||||||||||||| | | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 66509 tggacggcgagcgcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccg 66568 Query: 262 tggtccgtggcgcagctcggatgggtcgccgggcccgcc 300 ||| | |||||||||||| ||||||| |||||||||| Sbjct: 66569 tgggcgacggcgcagctcgggtgggtcggcgggcccgcc 66607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 ||||||||||||||||||||| ||| | | | |||||||| ||||||||||||||| Sbjct: 79201 cagggacggtgtggacggcgacgtcgcacatcgtggcggcggtggtcggctccggcgtgc 79142 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggt 287 || ||||| | ||| | ||||||||||| || ||||| Sbjct: 79141 tggcgctggcgtggacggtggcgcagctggggtgggt 79105
>ref|XM_472826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||| |||||||||| |||| ||||||||||||||||||||| ||||| |||||| Sbjct: 91 gggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctg 150 Query: 253 tcgctgccctggtccgtggcgcagct 278 |||||| | ||| |||||||||||| Sbjct: 151 tcgctggcgtggagcgtggcgcagct 176
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||||| |||||||||| |||| | | | ||||||||||||||||||||||||| Sbjct: 81406 cagggacggtatggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgc 81347 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcc 296 || ||||| | ||| |||||||||||| || ||||| |||||||| Sbjct: 81346 tggcgctggcgtggagcgtggcgcagctgggttgggtggccgggcc 81301 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 96442 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 96384 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 96383 acggcaagcggaactacacctacatggacgtcgtc 96349
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||||| |||||||||| |||| | | | ||||||||||||||||||||||||| Sbjct: 32606 cagggacggtatggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgc 32547 Query: 251 tgtcgctgccctggtccgtggcgcagctcggatgggtcgccgggcc 296 || ||||| | ||| |||||||||||| || ||||| |||||||| Sbjct: 32546 tggcgctggcgtggagcgtggcgcagctgggttgggtggccgggcc 32501 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 47642 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 47584 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 47583 acggcaagcggaactacacctacatggacgtcgtc 47549
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctg 252 ||||||| |||||||||| |||| ||||||||||||||||||||| ||||| |||||| Sbjct: 199 gggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctg 258 Query: 253 tcgctgccctggtccgtggcgcagct 278 |||||| | ||| |||||||||||| Sbjct: 259 tcgctggcgtggagcgtggcgcagct 284
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 190 acagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||| || |||||||||||||| | | || |||||||||||||||||||||||| Sbjct: 210 acagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtg 269 Query: 250 ctgtcgctg 258 ||||||||| Sbjct: 270 ctgtcgctg 278
>gb|AY224447.1| Oryza sativa (japonica cultivar-group) isolate 23048 amino acid permease-like protein mRNA, partial cds Length = 915 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 190 acagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||| || |||||||||||||| | | || |||||||||||||||||||||||| Sbjct: 16 acagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtg 75 Query: 250 ctgtcgctg 258 ||||||||| Sbjct: 76 ctgtcgctg 84
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 190 acagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||| || |||||||||||||| | | || |||||||||||||||||||||||| Sbjct: 212 acagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtg 271 Query: 250 ctgtcgctg 258 ||||||||| Sbjct: 272 ctgtcgctg 280
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 190 acagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtg 249 ||||||||| || |||||||||||||| | | || |||||||||||||||||||||||| Sbjct: 210 acagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtg 269 Query: 250 ctgtcgctg 258 ||||||||| Sbjct: 270 ctgtcgctg 278
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 343 ctcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctac 402 ||||||| |||||||||||||| || |||| ||| | |||| | |||||||||||||||| Sbjct: 469 ctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctac 528 Query: 403 atggacgccgtc 414 |||||||||||| Sbjct: 529 atggacgccgtc 540 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcg-cgcgcgtgatcacggcggtgatcggctccggcgtgct 251 |||||||||||||||||| ||| ||| | | ||||||||||||||||| || || ||||| Sbjct: 319 gggacggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgct 377 Query: 252 gtcgctg 258 ||||||| Sbjct: 378 gtcgctg 384
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| || |||||||||||||| | | || ||||||||||||||||||||||||| Sbjct: 86 cagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgc 145 Query: 251 tgtcgctg 258 |||||||| Sbjct: 146 tgtcgctg 153
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| || |||||||||||||| | | || ||||||||||||||||||||||||| Sbjct: 1826388 cagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgc 1826329 Query: 251 tgtcgctg 258 |||||||| Sbjct: 1826328 tgtcgctg 1826321 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tcctcctcttcgccctcatc 324 |||||||||||||||||||| Sbjct: 1315270 tcctcctcttcgccctcatc 1315251
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| || |||||||||||||| | | || ||||||||||||||||||||||||| Sbjct: 30967 cagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgc 30908 Query: 251 tgtcgctg 258 |||||||| Sbjct: 30907 tgtcgctg 30900
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| || |||||||||||||| | | || ||||||||||||||||||||||||| Sbjct: 78607 cagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgc 78548 Query: 251 tgtcgctg 258 |||||||| Sbjct: 78547 tgtcgctg 78540
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 343 ctcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctac 402 ||||||| |||||||||||||| || |||| ||| | |||| | |||||||||||||||| Sbjct: 114763 ctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctac 114822 Query: 403 atggacgccgtc 414 |||||||||||| Sbjct: 114823 atggacgccgtc 114834 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcg-cgcgcgtgatcacggcggtgatcggctccggcgtgct 251 |||||||||||||||||| ||| ||| | | ||||||||||||||||| || || ||||| Sbjct: 114613 gggacggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgct 114671 Query: 252 gtcgctg 258 ||||||| Sbjct: 114672 gtcgctg 114678
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 343 ctcctcggcgactgctaccgcagcgacgacgccgtcgccgggaaaaggaactacacctac 402 ||||||| |||||||||||||| || |||| ||| | |||| | |||||||||||||||| Sbjct: 69181 ctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctac 69240 Query: 403 atggacgccgtc 414 |||||||||||| Sbjct: 69241 atggacgccgtc 69252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 193 gggacggtgtggacggcgagcg-cgcgcgtgatcacggcggtgatcggctccggcgtgct 251 |||||||||||||||||| ||| ||| | | ||||||||||||||||| || || ||||| Sbjct: 69031 gggacggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgct 69089 Query: 252 gtcgctg 258 ||||||| Sbjct: 69090 gtcgctg 69096
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 191 cagggacggtgtggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgc 250 |||||||| || |||||||||||||| | | || ||||||||||||||||||||||||| Sbjct: 85 cagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgc 144 Query: 251 tgtcgctg 258 |||||||| Sbjct: 145 tgtcgctg 152
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 387 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 445 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 446 acggcaagcggaactacacctacatggacgtcgtc 480
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 266 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 324 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 325 acggcaagcggaactacacctacatggacgtcgtc 359
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 205 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 263 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 264 acggcaagcggaactacacctacatggacgtcgtc 298
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 69.9 bits (35), Expect = 8e-09 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 321 catcacctactacacctccgtgctcctcggcgactgctaccgcagcgac-gacgccgtcg 379 |||||||||||||||| |||| |||||| ||||||||||||||| || | ||| ||||| Sbjct: 266 catcacctactacaccgccgtcctcctctgcgactgctaccgca-cgccggaccccgtcc 324 Query: 380 ccgggaaaaggaactacacctacatggacgccgtc 414 ||| || ||||||||||||||||||||| |||| Sbjct: 325 acggcaagcggaactacacctacatggacgtcgtc 359
>dbj|AK071510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095G15, full insert sequence Length = 1150 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 269 tggcgcagctcggatgggtcgccgggcccgccacgctcctcctcttcgccctcatcacct 328 |||||||||| || ||||| || || ||| ||| ||||||||||||||| |||||||| Sbjct: 18 tggcgcagctggggtgggtggctggccccatcaccctcctcctcttcgccgccatcacct 77 Query: 329 actacacctccgtgctcctcggcgactgctaccgc 363 |||||||| || |||||| ||||||||||||| Sbjct: 78 tctacacctgcggcctcctctccgactgctaccgc 112
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||| | ||| | ||| |||||||||||| || ||| Sbjct: 54875 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 54934 Query: 286 gtcgccgggcc 296 || || ||||| Sbjct: 54935 gtggctgggcc 54945
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 226 acggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgg 285 ||||||||||||||||||||||||||| | ||| | ||| |||||||||||| || ||| Sbjct: 82950 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 82891 Query: 286 gt 287 || Sbjct: 82890 gt 82889
>dbj|AK069508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L23, full insert sequence Length = 1819 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 227 cggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatggg 286 |||||||| ||||||||||||||||| ||||| | ||| | ||||||||||| || |||| Sbjct: 181 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 240 Query: 287 t 287 | Sbjct: 241 t 241
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcgga 282 ||||| ||||||||||| | |||||||||| ||||| | ||| ||| ||||||||||| Sbjct: 103 atcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcgcagctcggc 162 Query: 283 tgggtcgccgg 293 ||||| ||||| Sbjct: 163 tgggtggccgg 173 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 aggaactacacctacatggacgccgtc 414 ||||||||| ||||||||||||||||| Sbjct: 268 aggaactactcctacatggacgccgtc 294
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||||| Sbjct: 17002 acggcggtgatcggctccggcgtgctg 17028
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcgga 282 ||||| ||||||||||| | |||||||||| ||||| | ||| ||| ||||||||||| Sbjct: 127035 atcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcgcagctcggc 127094 Query: 283 tgggtcgccgg 293 ||||| ||||| Sbjct: 127095 tgggtggccgg 127105 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 aggaactacacctacatggacgccgtc 414 ||||||||| ||||||||||||||||| Sbjct: 127200 aggaactactcctacatggacgccgtc 127226
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcgga 282 ||||| ||||||||||| | |||||||||| ||||| | ||| ||| ||||||||||| Sbjct: 46418 atcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcgcagctcggc 46477 Query: 283 tgggtcgccgg 293 ||||| ||||| Sbjct: 46478 tgggtggccgg 46488 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 aggaactacacctacatggacgccgtc 414 ||||||||| ||||||||||||||||| Sbjct: 46583 aggaactactcctacatggacgccgtc 46609
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcgga 282 ||||| ||||||||||| | |||||||||| ||||| | ||| ||| ||||||||||| Sbjct: 127153 atcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcgcagctcggc 127212 Query: 283 tgggtcgccgg 293 ||||| ||||| Sbjct: 127213 tgggtggccgg 127223 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 aggaactacacctacatggacgccgtc 414 ||||||||| ||||||||||||||||| Sbjct: 127318 aggaactactcctacatggacgccgtc 127344
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 226 acggcggtgatcggctccggcgtgctg 252 ||||||||||||||||||||||||||| Sbjct: 89741 acggcggtgatcggctccggcgtgctg 89767
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 130 cggcgggtcatcgccgccgccgac 153 |||||||||||||||||||||||| Sbjct: 3081900 cggcgggtcatcgccgccgccgac 3081877
>ref|NM_100875.1| Arabidopsis thaliana AAP8; amino acid permease AT1G10010 (AAP8) mRNA, complete cds Length = 1428 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcg 255 ||||||||||| |||| | | ||||||||||| || ||||| || ||||||||| Sbjct: 97 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcg 150
>ref|XM_475136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 ggtcatcgccgccgccgacgac 156 |||||||||||||||||||||| Sbjct: 589 ggtcatcgccgccgccgacgac 568
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ggtcatcgccgccgccgacgac 156 |||||||||||||||||||||| Sbjct: 143873 ggtcatcgccgccgccgacgac 143894
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.47 Identities = 55/66 (83%) Strand = Plus / Plus Query: 231 ggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgggtcgc 290 |||||| ||||||||||||||| | || | ||| |||||||||||| || ||||| || Sbjct: 2456155 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456214 Query: 291 cgggcc 296 |||||| Sbjct: 2456215 cgggcc 2456220 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 cgccgggcccgccacgctcctcctc 312 |||| |||||||||||||||||||| Sbjct: 24433039 cgcccggcccgccacgctcctcctc 24433015
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete sequence Length = 67878 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcg 255 ||||||||||| |||| | | ||||||||||| || ||||| || ||||||||| Sbjct: 11386 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcg 11439
>gb|DQ446241.1| Arabidopsis thaliana clone pENTR221-At1g10010 amino acid permease (At1g10010) mRNA, complete cds Length = 591 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 202 tggacggcgagcgcgcgcgtgatcacggcggtgatcggctccggcgtgctgtcg 255 ||||||||||| |||| | | ||||||||||| || ||||| || ||||||||| Sbjct: 97 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcg 150
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.47 Identities = 55/66 (83%) Strand = Plus / Plus Query: 231 ggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgggtcgc 290 |||||| ||||||||||||||| | || | ||| |||||||||||| || ||||| || Sbjct: 2456265 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456324 Query: 291 cgggcc 296 |||||| Sbjct: 2456325 cgggcc 2456330 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 cgccgggcccgccacgctcctcctc 312 |||| |||||||||||||||||||| Sbjct: 24350508 cgcccggcccgccacgctcctcctc 24350484
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 44.1 bits (22), Expect = 0.47 Identities = 55/66 (83%) Strand = Plus / Plus Query: 231 ggtgatcggctccggcgtgctgtcgctgccctggtccgtggcgcagctcggatgggtcgc 290 |||||| ||||||||||||||| | || | ||| |||||||||||| || ||||| || Sbjct: 28651 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 28710 Query: 291 cgggcc 296 |||||| Sbjct: 28711 cgggcc 28716
>dbj|AK106814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D01, full insert sequence Length = 1749 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 323 tcacctactacacctccgtgctcctcggcgactgctaccgcagcgacgac 372 ||||||||||| |||| | ||||||| ||||||||||||| ||||||| Sbjct: 313 tcacctactactcctcggccctcctcgccgactgctaccgcgacgacgac 362
>dbj|AK070770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069I18, full insert sequence Length = 2041 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 ggtcatcgccgccgccgacgac 156 |||||||||||||||||||||| Sbjct: 679 ggtcatcgccgccgccgacgac 658
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 68531 gtcatcgccgccgccgacgac 68511
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 cgccgggcccgccacgctcctcctc 312 |||| |||||||||||||||||||| Sbjct: 40918 cgcccggcccgccacgctcctcctc 40942
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgggtcatcgccgccgccgac 153 ||||||||||||||||||||| Sbjct: 558494 cgggtcatcgccgccgccgac 558474
>emb|AJ868286.1| Methanotrophic alpha proteobacterium arc2 partial pmoA gene for particulate methane monooxygenase alpha subunit, isolate arc2 Length = 463 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 gtgatcacggcggtgatcggc 240 ||||||||||||||||||||| Sbjct: 271 gtgatcacggcggtgatcggc 291
>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a gene for a novel protein (MGC35463), complete sequence Length = 107891 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 gtgtggttttgtggcctctgt 459 ||||||||||||||||||||| Sbjct: 92170 gtgtggttttgtggcctctgt 92190
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 tgaggcggcgggtcatcgccg 145 ||||||||||||||||||||| Sbjct: 800735 tgaggcggcgggtcatcgccg 800715
>ref|NM_136349.2| Drosophila melanogaster dream CG7863-RA (dream), mRNA Length = 2226 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 1359 gacgactactccctggacgacgacg 1383
>gb|AF242735.1|AF242735 Drosophila melanogaster STRICA (strica) mRNA, complete cds Length = 1749 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 1271 gacgactactccctggacgacgacg 1295
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 5421 gacgactactccctggacgacgacg 5397
>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR39E09, complete sequence Length = 163990 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 49246 gacgactactccctggacgacgacg 49222
>gb|BT024233.1| Drosophila melanogaster LD13366 full insert cDNA Length = 2243 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 1359 gacgactactccctggacgacgacg 1383
>gb|AF275814.1|AF275814 Drosophila melanogaster DREAM mRNA, complete cds Length = 2198 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 1314 gacgactactccctggacgacgacg 1338
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 214 gcgcgcgtgatcacggcggtgatcggctc 242 ||||| |||| |||||||||||||||||| Sbjct: 4621962 gcgcgggtgagcacggcggtgatcggctc 4621990
>emb|AJ459046.1|MSP459046 Methylocystis sp. F10V2a partial pmoA gene for particulate methane monooxygenase protein A, strain F10V2a Length = 495 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 gtgatcacggcggtgatcggc 240 ||||||||||||||||||||| Sbjct: 271 gtgatcacggcggtgatcggc 291
>dbj|AK060505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H11, full insert sequence Length = 2134 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 cgccgggcccgccacgctcctcctc 312 |||| |||||||||||||||||||| Sbjct: 609 cgcccggcccgccacgctcctcctc 585
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gacgactactccctcgacgacgacg 175 |||||||||||||| |||||||||| Sbjct: 67908 gacgactactccctggacgacgacg 67884
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 51756 gtcatcgccgccgccgacgac 51736
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gtcatcgccgccgccgacgac 156 ||||||||||||||||||||| Sbjct: 165969 gtcatcgccgccgccgacgac 165949
>emb|AL606986.27| Mouse DNA sequence from clone RP23-258K3 on chromosome 4, complete sequence Length = 219634 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ccatcacagcatccatcagtg 517 ||||||||||||||||||||| Sbjct: 147022 ccatcacagcatccatcagtg 147042
>ref|NM_104616.2| Arabidopsis thaliana AAP1; amino acid permease AT1G58360 (AAP1) mRNA, complete cds Length = 1715 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 232 atcacggcggtgataggctccggagtgttgtc 263
>ref|XM_471048.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4224 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tcatcgccgccgccgacgac 156 |||||||||||||||||||| Sbjct: 3610 tcatcgccgccgccgacgac 3591
>ref|XM_450531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 436 cgccgccgccgccgaccactccctcgac 463
>ref|XM_476456.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcctcctcttcgccctcatc 324 |||||||||||||||||||| Sbjct: 177 tcctcctcttcgccctcatc 196
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 acgctcctcctcttcgccctcatc 324 |||||||||||| ||||||||||| Sbjct: 34712 acgctcctcctcctcgccctcatc 34735
>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05, complete sequence Length = 129890 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 acgctcctcctcttcgccctcatc 324 |||||||||||| ||||||||||| Sbjct: 120218 acgctcctcctcctcgccctcatc 120241
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 16579 cgccgccgccgccgaccactccctcgac 16552
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cgggtcatcgccgccgccga 152 |||||||||||||||||||| Sbjct: 1729663 cgggtcatcgccgccgccga 1729682
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 gcgtgatcacggcggtgatcggct 241 |||||||||||||||||| ||||| Sbjct: 5590724 gcgtgatcacggcggtgaccggct 5590701
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactact 160 |||||||||||||||||||| Sbjct: 22920 cgccgccgccgacgactact 22901
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gggtcatcgccgccgccgac 153 |||||||||||||||||||| Sbjct: 43640 gggtcatcgccgccgccgac 43659
>ref|XM_845813.1| PREDICTED: Canis familiaris similar to ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant 3 (LOC491324), mRNA Length = 1144 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcttcgccctcatcacc 327 |||||||||||||||||||| Sbjct: 256 tcctcttcgccctcatcacc 275
>ref|XM_548445.2| PREDICTED: Canis familiaris similar to ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant 1 (LOC491324), mRNA Length = 1093 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcttcgccctcatcacc 327 |||||||||||||||||||| Sbjct: 219 tcctcttcgccctcatcacc 238
>ref|XM_857490.1| PREDICTED: Canis familiaris similar to ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant 4 (LOC491324), mRNA Length = 1025 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcttcgccctcatcacc 327 |||||||||||||||||||| Sbjct: 236 tcctcttcgccctcatcacc 255
>ref|XM_762683.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_448_29485_26609) partial mRNA Length = 2877 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 gctaccgcagcgacgacgcc 375 |||||||||||||||||||| Sbjct: 1376 gctaccgcagcgacgacgcc 1357
>emb|AL583826.16| Human DNA sequence from clone RP11-434B7 on chromosome 1 Contains the 3' end of the RPS6KC1 gene for ribosomal protein S6 kinase 52kDa polypeptide 1, complete sequence Length = 122208 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 agggcaggtgtggttttgtggcct 455 ||||||| |||||||||||||||| Sbjct: 27851 agggcagatgtggttttgtggcct 27874
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactact 160 |||||||||||||||||||| Sbjct: 143868 cgccgccgccgacgactact 143849
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 1498006 cgccgccgccgccgaccactccctcgac 1497979
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gtcatcgccgccgccgacga 155 |||||||||||||||||||| Sbjct: 3942636 gtcatcgccgccgccgacga 3942655
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tcatcgccgccgccgacgac 156 |||||||||||||||||||| Sbjct: 89269 tcatcgccgccgccgacgac 89288
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 110760 cgccgccgccgccgaccactccctcgac 110733
>gb|AC023736.4| Drosophila melanogaster X BAC RP98-4P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165052 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 aaagggcaggtgtggttttgtggcctct 457 |||||||||||| |||||||||||||| Sbjct: 122352 aaagggcaggtgctgttttgtggcctct 122325
>dbj|AB097445.1| Oryza sativa (japonica cultivar-group) transposon AnacB5 DNA, complete sequence Length = 1516 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 998 cgccgccgccgccgaccactccctcgac 1025
>gb|AF031649.1| Arabidopsis thaliana neutral amino acid transport system II (NAT2) gene, complete cds Length = 5798 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 2233 atcacggcggtgataggctccggagtgttgtc 2264
>gb|AY069889.1| Arabidopsis thaliana At1g58360/F19C14_3 mRNA sequence Length = 1644 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 232 atcacggcggtgataggctccggagtgttgtc 263
>gb|AY129334.1| Mycobacteriophage Rosebush, complete genome Length = 67480 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cggcgggtcatcgccgccgc 149 |||||||||||||||||||| Sbjct: 37596 cggcgggtcatcgccgccgc 37577
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 1498006 cgccgccgccgccgaccactccctcgac 1497979
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 9475521 cgccgccgccgccgaccactccctcgac 9475548
>emb|BX815188.1|CNS0ACDC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1653 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 213 atcacggcggtgataggctccggagtgttgtc 244
>emb|BX817828.1|CNS0AAXL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZH05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1531 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 154 atcacggcggtgataggctccggagtgttgtc 185
>gb|AF268969.1| Mesorhizobium loti ADP-glucose pyrophosphorylase (glgC), glycogen synthetase (glgA), and phosphoglucomutase (pgm) genes, complete cds Length = 5015 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tcatcgccgccgccgacgac 156 |||||||||||||||||||| Sbjct: 4468 tcatcgccgccgccgacgac 4487
>gb|AC008051.3|F19C14 Sequence of BAC F19C14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 86014 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 13107 atcacggcggtgataggctccggagtgttgtc 13076
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tcctcctcttcgccctcatc 324 |||||||||||||||||||| Sbjct: 80105 tcctcctcttcgccctcatc 80086
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 29859 cgccgcgctcctcctcttcgtcctcatc 29832
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 39157 cgccgccgccgccgaccactccctcgac 39184
>dbj|AB077822.1| Arabidopsis thaliana genomic DNA, chromosome 1, P1 clone:X7J, complete sequence Length = 77636 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 5323 atcacggcggtgataggctccggagtgttgtc 5354
>emb|X67124.1|ATPPPMR A.thaliana AAP1 mRNA for amino acid permease I Length = 1685 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 201 atcacggcggtgataggctccggagtgttgtc 232
>dbj|AK109764.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-H08, full insert sequence Length = 2546 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tcatcgccgccgccgacgac 156 |||||||||||||||||||| Sbjct: 1863 tcatcgccgccgccgacgac 1844
>dbj|AK071313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084A11, full insert sequence Length = 871 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 438 cgccgcgctcctcctcttcgtcctcatc 465
>dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A01, full insert sequence Length = 1054 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcctcctcttcgccctcatc 324 |||||||||||||||||||| Sbjct: 177 tcctcctcttcgccctcatc 196
>dbj|AK062593.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H04, full insert sequence Length = 2405 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 acgactactccctcgacgacgacg 175 ||||| |||||||||||||||||| Sbjct: 1077 acgacgactccctcgacgacgacg 1100
>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete sequence Length = 299153 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 aaagggcaggtgtggttttgtggcctct 457 |||||||||||| |||||||||||||| Sbjct: 279234 aaagggcaggtgctgttttgtggcctct 279207
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgccgccgccgacgactactccctcgac 168 ||||||||||| |||| ||||||||||| Sbjct: 1498003 cgccgccgccgccgaccactccctcgac 1497976
>emb|AL731633.2|OSJN00280 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0096E05, complete sequence Length = 129908 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 acgactactccctcgacgacgacg 175 ||||| |||||||||||||||||| Sbjct: 5462 acgacgactccctcgacgacgacg 5439
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 121082 cgccgcgctcctcctcttcgtcctcatc 121109
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 cgccacgctcctcctcttcgccctcatc 324 |||| ||||||||||||||| ||||||| Sbjct: 84608 cgccgcgctcctcctcttcgtcctcatc 84581
>gb|L16240.1|ATHAAT Arabidopsis thaliana amino acid transporter mRNA, complete cds Length = 1665 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 atcacggcggtgatcggctccggcgtgctgtc 254 |||||||||||||| |||||||| ||| |||| Sbjct: 201 atcacggcggtgataggctccggagtgttgtc 232
>dbj|AB024335.1| Comamonas testosteroni genes, strain:TA441, complete cds Length = 9925 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 tgatcggctccggcgtgctgtcgc 256 ||||||||||||||| |||||||| Sbjct: 3627 tgatcggctccggcgggctgtcgc 3650 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,665,613 Number of Sequences: 3902068 Number of extensions: 3665613 Number of successful extensions: 88616 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 83642 Number of HSP's gapped (non-prelim): 4924 length of query: 537 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 514 effective length of database: 17,143,297,704 effective search space: 8811655019856 effective search space used: 8811655019856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
