Clone Name | bart37d10 |
---|---|
Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 219 bits (559), Expect = 3e-57 Identities = 108/136 (79%), Positives = 111/136 (81%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MK NIANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 466 NDLPGLTDTEKPRMRG 513 NDLPGLTD EKPRMRG Sbjct: 121 NDLPGLTDVEKPRMRG 136
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 219 bits (558), Expect = 3e-57 Identities = 107/136 (78%), Positives = 111/136 (81%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MK N+ANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEFKGY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 466 NDLPGLTDTEKPRMRG 513 NDLPGLTDTEKPRMRG Sbjct: 121 NDLPGLTDTEKPRMRG 136
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 214 bits (546), Expect = 8e-56 Identities = 104/136 (76%), Positives = 111/136 (81%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MK N+ANPTTGCQKK+EIDDDQKLR +DKR+SQEV GD LGEEFKGY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKG Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120 Query: 466 NDLPGLTDTEKPRMRG 513 +DLPGLTDTEKPRMRG Sbjct: 121 SDLPGLTDTEKPRMRG 136
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 159 bits (402), Expect = 4e-39 Identities = 80/136 (58%), Positives = 96/136 (70%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTVPRRLG 134
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 159 bits (402), Expect = 4e-39 Identities = 80/136 (58%), Positives = 96/136 (70%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTVPRRLG 134
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 159 bits (402), Expect = 4e-39 Identities = 80/136 (58%), Positives = 96/136 (70%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTVPRRLG 134
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 155 bits (393), Expect = 5e-38 Identities = 78/136 (57%), Positives = 95/136 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++ +R Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTVPRRLG 134
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 155 bits (391), Expect = 8e-38 Identities = 76/136 (55%), Positives = 97/136 (71%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI++KGE Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD+ PR G Sbjct: 119 KDIPGLTDSTVPRRLG 134
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 153 bits (386), Expect = 3e-37 Identities = 75/136 (55%), Positives = 97/136 (71%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MK+NI+ P TGCQK +E+DD++KLR Y+KR+S ++ + LG+E+KGY+ +I GG DKQG Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI+KKGE Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 QDIPGLTDTTIPRRLG 134
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 152 bits (385), Expect = 4e-37 Identities = 76/136 (55%), Positives = 95/136 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E++D++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIV+KGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD PR G Sbjct: 119 KDIPGLTDNTVPRRLG 134
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 151 bits (382), Expect = 9e-37 Identities = 76/136 (55%), Positives = 95/136 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CI +LSV+NLVI+KKGE Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD+ PR G Sbjct: 119 KDIPGLTDSTVPRRLG 134
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 150 bits (379), Expect = 2e-36 Identities = 76/136 (55%), Positives = 94/136 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR YDKRIS E+ D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+ RVRLLL + C+ CIV +LSV++LVI+KKGE Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD PR G Sbjct: 119 QDIPGLTDKTIPRRLG 134
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 149 bits (377), Expect = 3e-36 Identities = 75/136 (55%), Positives = 92/136 (67%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E+KGY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+ RVRLLL +G C+ CIV Q+LS + L++VKKGE Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTVPRRLG 134
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 145 bits (367), Expect = 5e-35 Identities = 74/136 (54%), Positives = 91/136 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E+KGY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+ RVRLLL +G C+ CIV Q+LS + L++VKKGE Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT R G Sbjct: 119 KDIPGLTDTTVLRRLG 134
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 143 bits (361), Expect = 2e-34 Identities = 73/136 (53%), Positives = 91/136 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ Q V D+LG+E+KGY +I GG DKQG Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT GRVRLLL +G C+ CIV ++SV+ LV++KKGE Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTDT PR G Sbjct: 119 KDIPGLTDTTIPRRLG 134
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 141 bits (356), Expect = 9e-34 Identities = 69/91 (75%), Positives = 72/91 (79%) Frame = +1 Query: 241 KGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 420 KGY+FKIMGGCDKQGFPMKQGVLT GRVRLLL+RGTPCF CIVS Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60 Query: 421 QDLSVINLVIVKKGENDLPGLTDTEKPRMRG 513 DLSV+NLVIVKKGENDLPGLTDTEKPRMRG Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRG 91
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 141 bits (355), Expect = 1e-33 Identities = 71/136 (52%), Positives = 91/136 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV DLLG+E+KGY+ ++ GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+ RVRLL+ +G C+ CIV +LSV+ LVIV+KGE Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++PGLTD PR G Sbjct: 119 QEIPGLTDGNVPRRLG 134
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 140 bits (354), Expect = 2e-33 Identities = 74/136 (54%), Positives = 88/136 (64%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPM QGVL RVRLLL G PC+ CIV QDL+V+ L IVK+GE Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD P+ G Sbjct: 119 QDIPGLTDVTVPKRLG 134
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 140 bits (353), Expect = 2e-33 Identities = 73/136 (53%), Positives = 88/136 (64%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPM QGVL RVRLLL G PC+ CIV QDL+V+ L I+K+GE Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+PGLTD P+ G Sbjct: 119 QDIPGLTDVTVPKRLG 134
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 139 bits (350), Expect = 5e-33 Identities = 71/136 (52%), Positives = 90/136 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVLT+ RVRLL+ +G C+ CIV +LSV+ LVIV+KGE Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++PGLTD PR G Sbjct: 119 QEIPGLTDGNVPRRLG 134
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 139 bits (350), Expect = 5e-33 Identities = 70/136 (51%), Positives = 93/136 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK ++I+D+ KLR Y+KR+ QEV GD +G+EFKGYIF+I GG DKQG Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGV+ RV+LLL +G C+ CIV+QDL+V+ L +VK+G+ Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118 Query: 466 NDLPGLTDTEKPRMRG 513 +D+ GLTDT P+ G Sbjct: 119 SDIEGLTDTTTPKRLG 134
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 138 bits (348), Expect = 8e-33 Identities = 72/136 (52%), Positives = 89/136 (65%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNIA P G QK VE+DD+ ++R YDKRI QE+ G+ +G+EFKGY FKI GG DKQG Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVL RV+LLL +G C+ IV DL+V++LVIVKKGE Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 +L G+TD P+ G Sbjct: 119 QELEGVTDATVPKRLG 134
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 138 bits (347), Expect = 1e-32 Identities = 69/136 (50%), Positives = 93/136 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 M+LN A P TG QK E+D+++KLR ++KR+SQEV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQG+LT+GRVRLLL +G C+ CIV ++S ++LVIVKKG+ Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++ GLTD+ PR G Sbjct: 119 GEIEGLTDSVLPRKLG 134
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 135 bits (341), Expect = 5e-32 Identities = 71/136 (52%), Positives = 88/136 (64%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK EIDD+ ++R +DKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVL R++LLL + C+ IV DL+V+ LVIVKKGE Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 +L GLTDT P+ G Sbjct: 119 QELEGLTDTTVPKRLG 134
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 135 bits (339), Expect = 9e-32 Identities = 69/136 (50%), Positives = 89/136 (65%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNIA P G QK ++I+D+ ++R Y+KR+ QEV D LG+EFKGY+ KI GG DKQG Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGV+ RVRLLL + + C+ CIVS DLSV+++VIVK+G+ Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118 Query: 466 NDLPGLTDTEKPRMRG 513 D+ GLT PR G Sbjct: 119 ADIEGLTTETVPRRLG 134
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 134 bits (337), Expect = 1e-31 Identities = 70/136 (51%), Positives = 90/136 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK VEIDD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVL RV+LL+ +GT C+ IV DL+V+ LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++ G+T+ P+ G Sbjct: 119 QEIEGVTNETVPKRLG 134
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 133 bits (335), Expect = 2e-31 Identities = 66/136 (48%), Positives = 89/136 (65%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK +E+DD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVL RV+LL+ +GT C+ IV DL+V+ L+I KKG+ Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++ G+T+ P+ G Sbjct: 119 QEIEGITNESVPKRLG 134
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 131 bits (329), Expect = 1e-30 Identities = 68/136 (50%), Positives = 88/136 (64%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 FPMKQGVL RV+LLL +G C+ IV DL+V+ L+I KKGE Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118 Query: 466 NDLPGLTDTEKPRMRG 513 ++ G+T+ P+ G Sbjct: 119 QEIEGITNDTVPKRLG 134
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 109 bits (273), Expect = 4e-24 Identities = 59/137 (43%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 282 MKLNIA P G K+ EI D+ R L D R+ EV G + G EFKGYIF++ GG DK Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 283 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM GVL S RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 463 ENDLPGLTDTEKPRMRG 513 + + G+TDT PR G Sbjct: 121 DQPIEGVTDTTAPRRLG 137
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 107 bits (266), Expect = 2e-23 Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 1/137 (0%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 282 M LNIA P G K+ EI D+ R L D R+ EV G + G EFKGYIF++ GG DK Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 283 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM GVL S RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 463 ENDLPGLTDTEKPRMRG 513 + + G+TDT PR G Sbjct: 121 DQPIEGVTDTTAPRRLG 137
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 78.6 bits (192), Expect = 9e-15 Identities = 46/112 (41%), Positives = 66/112 (58%) Frame = +1 Query: 154 EIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLL 333 EI+ ++R LYDK+I + G +LGEEF+G I +I GG D QGFPM G LT RVR L Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61 Query: 334 LHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTD 489 L +G + IVS+++ V+NL+I++ GE ++ GLT+ Sbjct: 62 LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILRPGEKEIDGLTN 111
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 53.1 bits (126), Expect = 4e-07 Identities = 40/125 (32%), Positives = 59/125 (47%) Frame = +1 Query: 109 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGF 288 K+ +A+P +VE+ + L KRI + G+++G GY KI GG DK GF Sbjct: 5 KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61 Query: 289 PMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGEN 468 PM+ + RVRLLL G P F +S+D+ +N VIV+ G+ Sbjct: 62 PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVEYGDK 118 Query: 469 DLPGL 483 + L Sbjct: 119 PVEEL 123
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e| Length = 125 Score = 53.1 bits (126), Expect = 4e-07 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 9/91 (9%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 252 +T KL I+NP G K+VEI + + L +RI +E+ + ++ GEE Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAK 60 Query: 253 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 345 KI GG DK GFPM+ V RV++LL RG Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e| Length = 125 Score = 52.8 bits (125), Expect = 6e-07 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 252 +T KL I++P TG K++EI + L KRI ++ + +L G+EF + Sbjct: 2 ATFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVK 60 Query: 253 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 345 +I GG DK GFPM+ + RVR+LL +G Sbjct: 61 MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 51.6 bits (122), Expect = 1e-06 Identities = 40/131 (30%), Positives = 61/131 (46%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 282 T K +A+P TG ++E D+ L K+I + G ++G E GY +I GG D Sbjct: 3 TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIGLE--GYKLQIRGGTDSS 56 Query: 283 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM+ + S +VR+LL P F ++ D+ IN+ +V+ G Sbjct: 57 GFPMRPDIHGSRKVRVLL-SAPPGFKPKRKGERRRKTVRGNT--IAPDIVQINVKVVEYG 113 Query: 463 ENDLPGLTDTE 495 E +P L E Sbjct: 114 EKSIPELLGLE 124
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 51.6 bits (122), Expect = 1e-06 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Frame = +1 Query: 142 QKKVEID-DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 318 +K V+++ D + R L I E G ++G GY KI GG DK GFPMK+ V + Sbjct: 11 EKSVQMEVDPSESRGLIGLTIGDEFDGSIIG--LSGYKLKITGGSDKNGFPMKKTVPGAR 68 Query: 319 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEK 498 R+R L+ G +S D+ IN V+++KGE L L ++ Sbjct: 69 RIRSLVSGGV---GYKPRRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEELLGADE 125
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e| Length = 125 Score = 50.8 bits (120), Expect = 2e-06 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 252 +T KL I++P +G K+VEI + L KRI ++ + +L G+EF + Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVK 60 Query: 253 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 345 +I GG DK GFPM+ + RVR+LL +G Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e| Length = 125 Score = 47.4 bits (111), Expect = 2e-05 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 9/91 (9%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFK------- 258 +T KL I++P +G K++EI L K+I ++ LG + K K Sbjct: 2 TTFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVK 60 Query: 259 --IMGGCDKQGFPMKQGVLTSGRVRLLLHRG 345 I GG DK GFPM+ + RVR+LL +G Sbjct: 61 MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e| Length = 127 Score = 45.1 bits (105), Expect = 1e-04 Identities = 36/119 (30%), Positives = 52/119 (43%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 297 IA+ TG K EID + + L +RI E+ G E GY KI GG GFPMK Sbjct: 6 IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62 Query: 298 QGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDL 474 + + +G+ R+L+ IV D+S +N++I + G L Sbjct: 63 KDLPIAGKKRILI----TYTHGRKGKNGIRKRVTLRGNIVGSDISQLNMIITQYGPQPL 117
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e| Length = 124 Score = 42.7 bits (99), Expect = 6e-04 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 297 IA+P TG K EI + ++ +L ++I E+ G + GY + GG GFPM+ Sbjct: 4 IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60 Query: 298 QGVLTSGRVRLLL-----HRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 + T G+ ++L+ +RG I+ D+S INL IV+ G Sbjct: 61 SDLQTQGKKQILVSYKKGYRG---------KNGIRKRITVRGSIIGSDISQINLKIVQYG 111 Query: 463 ENDLPGLTDTEK 498 L D ++ Sbjct: 112 PTPLEEKKDDQQ 123
>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e| Length = 126 Score = 41.2 bits (95), Expect = 0.002 Identities = 27/76 (35%), Positives = 42/76 (55%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 279 S +K+ +++P +G ++E + Q L Y K+I + G +G + GY KI GG D Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59 Query: 280 QGFPMKQGVLTSGRVR 327 GFPM++ V G VR Sbjct: 60 AGFPMRKEV--EGAVR 73
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 40.4 bits (93), Expect = 0.003 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Frame = +1 Query: 118 IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFP 291 I++P TG QK VE L K+I + G ++ Y KI GG D+ GFP Sbjct: 7 ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLP-PDYELKITGGTDRDGFP 62 Query: 292 MKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 465 M+ + + R RLLL G ++S+D+ IN V+VK G+ Sbjct: 63 MRPDLPGTARRRLLLSGGV---GFRPKEKGLRKRKGVRGRVISKDILQINTVVVKHGK 117
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e| Length = 136 Score = 37.7 bits (86), Expect = 0.019 Identities = 26/82 (31%), Positives = 39/82 (47%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 279 + K+ +++P G +++I D + L K I V G + G GY +I GGCD Sbjct: 2 ANFKVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDG 58 Query: 280 QGFPMKQGVLTSGRVRLLLHRG 345 GF MK + R R+L G Sbjct: 59 SGFVMKPDLPGPRRQRILTATG 80
>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e| Length = 131 Score = 37.7 bits (86), Expect = 0.019 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 279 +T ++ +A+P +G + E+D Q + I V G +G + GY +I GG D Sbjct: 2 ATFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58 Query: 280 QGFPMKQGVLTSGRVRLLLHRG 345 G PM++ V S + +LL G Sbjct: 59 AGRPMREDVDGSDLMEVLLEGG 80
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 37.0 bits (84), Expect = 0.032 Identities = 27/70 (38%), Positives = 35/70 (50%) Frame = +1 Query: 148 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVR 327 ++ + DD ++ L I G L+G G FKI GG D G PM GV SGR + Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192 Query: 328 LLLHRGTPCF 357 +LL G P F Sbjct: 193 VLL-AGPPGF 201
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e| Length = 213 Score = 36.6 bits (83), Expect = 0.041 Identities = 29/98 (29%), Positives = 42/98 (42%) Frame = +1 Query: 163 DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHR 342 D KL N+ +I + ++ G K KI GG D GFPM+ V G R LL Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177 Query: 343 GTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 456 G P F +++QD+ IN +I++ Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e| Length = 136 Score = 36.2 bits (82), Expect = 0.054 Identities = 25/82 (30%), Positives = 38/82 (46%) Frame = +1 Query: 100 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 279 + K+ +++P +++I D + L K I V G + G GY +I GGCD Sbjct: 2 ANFKVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDG 58 Query: 280 QGFPMKQGVLTSGRVRLLLHRG 345 GF MK + R R+L G Sbjct: 59 SGFVMKPDLPGPRRQRILTATG 80
>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) (Docking protein CAIR-1) Length = 575 Score = 35.8 bits (81), Expect = 0.070 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Frame = +3 Query: 6 PKPYPSS--------NRAAPPPPLHPAFGLLAAGEL-VPQLHHEAEHREPH--HGVPEEG 152 PK PSS +R P HP + L G + +P LH AE+R+ H H P+ G Sbjct: 59 PKETPSSANGPSREGSRLPPAREGHPVYPQLRPGYIPIPVLHEGAENRQVHPFHVYPQPG 118 Query: 153 RDR*RPEAA 179 R R EAA Sbjct: 119 MQRFRTEAA 127
>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) Length = 577 Score = 33.9 bits (76), Expect = 0.27 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +3 Query: 12 PYPSSNRAAPPPPLHPAFGLLAAGEL-VPQLHHEAEHREPH--HGVPEEGRDR*RPEAA 179 P + +R P HP + L G + +P LH +E+R+PH H + G R R EAA Sbjct: 71 PSRNGSRLLPIREGHPIYPQLRPGYIPIPVLHEGSENRQPHLFHAYSQPGVQRFRTEAA 129
>CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog| Length = 1091 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = +3 Query: 39 PPPPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEG 152 PPPPL PA +G P HH H HHG G Sbjct: 63 PPPPLPPAAFGAYSGGAGPSRHHHPAHHFHHHGQAPPG 100
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e| Length = 214 Score = 33.5 bits (75), Expect = 0.35 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Frame = +1 Query: 145 KKVEIDDDQ-KLRNLYDKRISQEV-VGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 318 K ++I DQ K NL +I L+G K KI GG D GFPM+ V+ + Sbjct: 115 KTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAA 171 Query: 319 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 456 + ++LL G P F +SQ++ IN +IV+ Sbjct: 172 KRKILL-SGPPGFYPNENGERRRKTIRGNT--ISQEIVQINTIIVR 214
>ETS6_DROME (P29776) DNA-binding protein D-ETS-6| Length = 475 Score = 31.6 bits (70), Expect = 1.3 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 54 HPAFGLLAAGELVPQLHHEAEHREPHH 134 H A G + G P LHH +H PHH Sbjct: 362 HHAGGAMQLGRHPPPLHHHPQHSHPHH 388
>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)| Length = 128 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 297 +++P G ++++D Q + + EV G +G + GY ++ GG D G PM+ Sbjct: 7 VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVGLD--GYSLELTGGSDTSGRPMR 63 Query: 298 QGV 306 V Sbjct: 64 PDV 66
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = +3 Query: 6 PKPYPSSNRAAPPPPLHPAFGLLAAGELVP 95 P P PSS PPPL PA L+ AG L P Sbjct: 399 PPPPPSSGNGPAPPPLPPA--LVPAGGLAP 426
>SL9A5_RAT (Q9Z0X2) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5) (NHE-5)| (Solute carrier family 9 member 5) Length = 898 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = -1 Query: 355 SKVCPCEAEGGHAQKLALLASLGSPAYHSHP*S*RYNP*IPHPEDHQL-------PPGRF 197 +K+ P + + G Q ++ L SL SP P R P PE+ Q+ P F Sbjct: 782 TKIVPVDMQTGWNQSISSLESLASPPCTQPPTLTRLPPHPLVPEEPQVPLDLSSDPRSSF 841 Query: 196 SCHKGSAASGRHRSRPSSGTP 134 + A +GR RS S+ P Sbjct: 842 AFPPSLAKAGRSRSESSADIP 862
>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)| Length = 1096 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Frame = +3 Query: 18 PSSNRAAPP--PPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEG 152 P + R + P PPL PA +G P HH H HHG + G Sbjct: 54 PRAARGSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFHHHGQAQPG 100
>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c| Length = 163 Score = 29.6 bits (65), Expect = 5.0 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +1 Query: 145 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 237 +KV D +QK+R+ YD +S V+G+L+ +E Sbjct: 85 EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 29.6 bits (65), Expect = 5.0 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 93 PQLHHEAEHREPHHGVPEE 149 P+ HHE H E HH PEE Sbjct: 66 PEEHHEPHHEEHHHHHPEE 84
>STB3_YEAST (Q12427) Protein STB3 (SIN3-binding protein 3)| Length = 513 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +3 Query: 21 SSNRAAPPPPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEGRD 158 S+N P P +P+F G++ P L H+ ++ H P G D Sbjct: 459 STNGVVSPKPTNPSFTNSQNGDIEPPLQHD---QQKHEQQPRNGED 501
>CITE4_HUMAN (Q96RK1) Cbp/p300-interacting transactivator 4 (MSG1-related| protein 2) (MRG-2) Length = 184 Score = 29.3 bits (64), Expect = 6.6 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 6 PKPYPSSNRAAPPPPLHPAFGL 71 P P P+ + AAPPPP H G+ Sbjct: 111 PGPQPAPSAAAPPPPAHALGGM 132
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +3 Query: 3 RPKPYPSSNRAAPPPP--LHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEGRDR 161 RPKP + PP P L G A E P H EAE E H GV G ++ Sbjct: 131 RPKPRAKEGTSDPPSPLLLPSPGGWKAITEKPPGGHEEAE--EDHQGVGLRGEEK 183
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 Query: 6 PKPYPSSNRAAPPPPLHPAFGLLAAG 83 P P P N+A PPPP PA L A+G Sbjct: 583 PPPPPLPNQAPPPPPPPPAPPLPASG 608
>MARH4_MOUSE (Q80TE3) Membrane-associated RING finger protein 4| (Membrane-associated RING-CH protein IV) (MARCH-IV) Length = 408 Score = 29.3 bits (64), Expect = 6.6 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 Query: 151 PSSGTPWWGSRCSASWWSCGTSSPA 77 P G WW C W+SCG +PA Sbjct: 4 PLGGLLWWWC-CCCGWYSCGLCTPA 27
>SMC4_YEAST (Q12267) Structural maintenance of chromosome 4| Length = 1418 Score = 29.3 bits (64), Expect = 6.6 Identities = 22/87 (25%), Positives = 37/87 (42%) Frame = +1 Query: 73 SPPASSCRNSTMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYI 252 SPP S R+ T +L + + +VE+ K+ S+ + +L+ E FK Y Sbjct: 109 SPPRSPGRSPTRRLELLQLSPVKNSRVELQKIYDRHQSSSKQQSRLFINELVLENFKSYA 168 Query: 253 FKIMGGCDKQGFPMKQGVLTSGRVRLL 333 K + G F G SG+ ++ Sbjct: 169 GKQVVGPFHTSFSAVVGPNGSGKSNVI 195
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 29.3 bits (64), Expect = 6.6 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = +3 Query: 6 PKPYPSSNRAAPPPPLHP--AFGLLAAGELVPQLHHEAEHREPHHGVPEEGRDR*RPEAA 179 P P R + P A L AG+ VP+ E E E E D+ +A Sbjct: 284 PSPNKKKRRVVKTKSITPLQAMMLRMAGQSVPEEEEEDEEEEYSESEDSEAEDQASTDAP 343 Query: 180 EPL*QENLP 206 +PL LP Sbjct: 344 QPLVNPRLP 352
>NR4A2_XENLA (Q04913) Orphan nuclear receptor NR4A2 (Orphan nuclear receptor| NURR1) (Nerve growth factor-induced protein I-B homolog) Length = 577 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 Query: 199 FSCHKGSAASGRHRSRPSSGTPWWGSRCSASWWSCGTSSPAASNP 65 F C+ GS + + SSG+ ++GS CS S+P NP Sbjct: 86 FGCYPGSFTNQLDETMSSSGSDYYGSPCSIP----SPSTPGFQNP 126
>TRI66_HUMAN (O15016) Tripartite motif protein 66| Length = 1214 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 Query: 18 PSSNRAAPPPPLHPAFGLLAAGELVPQ 98 PS PPP +HPA E+VPQ Sbjct: 328 PSLKGQVPPPSIHPAHSFRQPPEMVPQ 354
>ENV_MLVCB (P08360) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Spike protein p15E; R protein] Length = 661 Score = 28.9 bits (63), Expect = 8.6 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 6/39 (15%) Frame = -1 Query: 151 PSSGTPWWGSRCSA------SWWSCGTSSPAASNPNAGW 53 P S P W C + W C T+ AA NP + W Sbjct: 153 PGSHRPRWARSCGGLDAYYCASWGCETTGRAAWNPTSSW 191
>ILVD_THET8 (Q5SIY0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 555 Score = 28.9 bits (63), Expect = 8.6 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Frame = +1 Query: 199 ISQEVVGDLLGEEFKGYIFKIMGG---CDKQGFPMKQGVLTSGRVRLLLHRGT 348 +S+EV+ D + +GY++ M G CDK GV+ SG ++L+ GT Sbjct: 92 VSREVIADSVELIAQGYLYDGMVGLSACDKTIPGTAMGVIRSGVPGMILYGGT 144
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 28.9 bits (63), Expect = 8.6 Identities = 16/47 (34%), Positives = 17/47 (36%) Frame = +3 Query: 12 PYPSSNRAAPPPPLHPAFGLLAAGELVPQLHHEAEHREPHHGVPEEG 152 P P + PPP HP G P H H P HG P G Sbjct: 348 PPPHGHPPHGPPPRHPPHG--------PPPHGHPPHGPPPHGHPPHG 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,351,842 Number of Sequences: 219361 Number of extensions: 1495947 Number of successful extensions: 6360 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 5501 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6257 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)