Clone Name | bart37d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-gluta... | 32 | 1.1 | 2 | CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-gluta... | 31 | 3.1 | 3 | CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial mar... | 30 | 4.1 | 4 | CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-gluta... | 30 | 4.1 | 5 | EMSY_HUMAN (Q7Z589) Protein EMSY | 30 | 6.9 | 6 | FTSK_RHIME (Q92L89) DNA translocase ftsK | 29 | 9.1 |
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>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 390 Score = 32.3 bits (72), Expect = 1.1 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 11/90 (12%) Frame = -2 Query: 292 APTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPE--AMTGTAQMSAISVTH---- 131 AP A+A +R P R A AH A+ TP TGTA+ A + Sbjct: 161 APAPSAAAPARAVPSRTVAPAAAPAAH------AHHTPAHPTTTGTAKRKAYKLVAIGTS 214 Query: 130 -----AVMLLLTAMAGGSPSPLPLSQTVPA 56 A+ +LT + P+PL L Q +PA Sbjct: 215 TGGPVALQRVLTQLPANFPAPLVLIQHMPA 244
>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 387 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 11/90 (12%) Frame = -2 Query: 292 APTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMT--GTAQMSAISVTH---- 131 APT + A + + P A R + ++P A A+ P T GT + A + Sbjct: 152 APTSSSRAPAPTTAPARAVPTRTAAPATAPAAHAHHAPAHPTTSGTPKRKAYKLVAIGTS 211 Query: 130 -----AVMLLLTAMAGGSPSPLPLSQTVPA 56 A+ +LT + P+PL L Q +PA Sbjct: 212 TGGPVALQRVLTQLPASFPAPLVLIQHMPA 241
>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 765 Score = 30.4 bits (67), Expect = 4.1 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Frame = -2 Query: 280 PASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTG-------TAQMSAISVTHAVM 122 P + S + PP + T R+S H +P ANQ P + T Q S+IS TH+ Sbjct: 591 PQLSVSALQPP-LPTNSRSS-VHETPVPAANQPPAFPSSPLPPQRPTNQTSSISPTHSYS 648 Query: 121 LLLTAMAGGSPSP--LPLSQTVPA 56 G PSP +P +VP+ Sbjct: 649 RAPLVPREGVPSPKSVPQLPSVPS 672
>CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-glutamate| methylesterase 3 (EC 3.1.1.61) Length = 386 Score = 30.4 bits (67), Expect = 4.1 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%) Frame = -2 Query: 292 APTKPASAASRMSP-PRMATGQRASRAHSSP*ADANQTPEAMT--GTAQMSAISVTH--- 131 AP+ +S AS +P P A R + ++P A + P T GTA+ A + Sbjct: 150 APSTLSSRASAPAPAPARAVPSRTATPAAAPAAPTSHAPAHPTTSGTAKRKAYKLVAIGT 209 Query: 130 ------AVMLLLTAMAGGSPSPLPLSQTVPA 56 A+ +LT + P+PL L Q +PA Sbjct: 210 STGGPVALQRVLTQLPANFPAPLVLIQHMPA 240
>EMSY_HUMAN (Q7Z589) Protein EMSY| Length = 1322 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/69 (21%), Positives = 34/69 (49%) Frame = -2 Query: 271 AASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTGTAQMSAISVTHAVMLLLTAMAGGS 92 A++ PP + T ++S +S ++ TP + T ++A+ + +++ T G S Sbjct: 313 ASTTQKPPVVITASQSSLVSNSSSGSSSSTPSPIPNTVAVTAVVSSTPSVVMSTVAQGVS 372 Query: 91 PSPLPLSQT 65 S + ++ T Sbjct: 373 TSAIKMAST 381
>FTSK_RHIME (Q92L89) DNA translocase ftsK| Length = 881 Score = 29.3 bits (64), Expect = 9.1 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -2 Query: 292 APTKPA--SAASRMSPPRMATGQRASR 218 AP KPA A SR++PPR GQR R Sbjct: 338 APPKPALAMAGSRVAPPRPKAGQRVER 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,965,027 Number of Sequences: 219361 Number of extensions: 788524 Number of successful extensions: 3280 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3277 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)