ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart37d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur... 218 1e-56
2UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur... 152 5e-37
3UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfu... 152 9e-37
4UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfu... 151 2e-36
5UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfu... 150 2e-36
6UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfu... 142 1e-33
7UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfu... 141 2e-33
8UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur... 36 0.074
9UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.16
10UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.16
11UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.16
12UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.16
13UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.21
14UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.21
15UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.21
16UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.21
17UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur... 35 0.21
18UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur... 34 0.28
19UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.48
20UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.48
21UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur s... 33 0.48
22UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.48
23MBTP1_RAT (Q9WTZ3) Membrane-bound transcription factor site 1 pr... 33 0.62
24UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.62
25UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.81
26MBTP1_MOUSE (Q9WTZ2) Membrane-bound transcription factor site 1 ... 33 0.81
27MBTP1_HUMAN (Q14703) Membrane-bound transcription factor site 1 ... 33 0.81
28MBTP1_CRIGR (Q9Z2A8) Membrane-bound transcription factor site 1 ... 33 0.81
29UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.81
30UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.4
31UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.4
32ISPD_CHLCV (Q824I4) 2-C-methyl-D-erythritol 4-phosphate cytidyly... 30 5.3
33UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur... 30 5.3
34TOP2_MIMIV (Q5UQE6) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoi... 30 6.9
35UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur... 29 9.0
36DNAJ_MYCPU (Q98PI9) Chaperone protein dnaJ 29 9.0
37SAPA_HAEIN (P45285) Peptide transport periplasmic protein sapA p... 29 9.0

>UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 273

 Score =  218 bits (555), Expect = 1e-56
 Identities = 112/162 (69%), Positives = 123/162 (75%)
 Frame = +2

Query: 107 MLRVAGRRLSSSLSWRPAATVXXXXXXXXXXXXXXXXXXXXXYQRRFAIESPFFTAARGF 286
           MLRVAGRRLSSSLSWRPAA V                      Q RF+I+SPFF A+RGF
Sbjct: 1   MLRVAGRRLSSSLSWRPAAAVARGPLAGAGVPDRDDDSARGRSQPRFSIDSPFFVASRGF 60

Query: 287 SSAETLVPRNQDAGLVELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYFVLSGG 466
           SS ET+VPRNQDAGL +LPATVAA+KNPN K++YD+YNHERYPPGDPSKRAFAYFVLSGG
Sbjct: 61  SSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGG 120

Query: 467 RFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           RF+YAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 121 RFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGT 162



to top

>UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 265

 Score =  152 bits (385), Expect = 5e-37
 Identities = 91/162 (56%), Positives = 105/162 (64%)
 Frame = +2

Query: 107 MLRVAGRRLSSSLSWRPAATVXXXXXXXXXXXXXXXXXXXXXYQRRFAIESPFFTAARGF 286
           MLRVAGRRLSSS + R ++T                           ++ S F    RGF
Sbjct: 1   MLRVAGRRLSSSAA-RSSSTFFTRSSFTVTDDSSPARSPSP------SLTSSFLDQIRGF 53

Query: 287 SSAETLVPRNQDAGLVELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYFVLSGG 466
           SS  ++ P +Q   + +LPATVAA+KNP+SKI+YD  NHERYPPGDPSKRAFAYFVL+GG
Sbjct: 54  SS-NSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGG 112

Query: 467 RFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           RFVYAS           SMSASKDVLALASLEVDLSSIEPGS
Sbjct: 113 RFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGS 154



to top

>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 2) (RISP2)
          Length = 272

 Score =  152 bits (383), Expect = 9e-37
 Identities = 88/163 (53%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = +2

Query: 107 MLRVAGRRLSSSLSWRPAATVXXXXXXXXXXXXXXXXXXXXXYQRRFAIESPFFTAARGF 286
           MLR+AGRR SS   W   +                            ++ S F    RGF
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGF 60

Query: 287 SSAETLVPRNQDAGLV-ELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYFVLSG 463
           SS    V    D GLV +LP TVAA+KNP SKI+YD++NHERYPPGDPSKRAFAYFVL+G
Sbjct: 61  SSNS--VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 118

Query: 464 GRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           GRFVYAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 119 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGT 161



to top

>UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfur subunit 3,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 3) (RISP3)
          Length = 268

 Score =  151 bits (381), Expect = 2e-36
 Identities = 87/162 (53%), Positives = 104/162 (64%)
 Frame = +2

Query: 107 MLRVAGRRLSSSLSWRPAATVXXXXXXXXXXXXXXXXXXXXXYQRRFAIESPFFTAARGF 286
           MLR+AGR+LSSS + R ++                            ++ S F    RGF
Sbjct: 1   MLRIAGRKLSSSAATRSSSAFFTRNPFTFTDDSSSPARSPSPA----SLASQFLDQFRGF 56

Query: 287 SSAETLVPRNQDAGLVELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYFVLSGG 466
           SS  ++ P +Q   + +LPATVAA+KNP+SKI+YD  NHERYPPGDPSKRAFAYFVL+GG
Sbjct: 57  SS-NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGG 115

Query: 467 RFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           RFVYAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 116 RFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGT 157



to top

>UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 5) (RISP5)
          Length = 268

 Score =  150 bits (380), Expect = 2e-36
 Identities = 87/162 (53%), Positives = 104/162 (64%)
 Frame = +2

Query: 107 MLRVAGRRLSSSLSWRPAATVXXXXXXXXXXXXXXXXXXXXXYQRRFAIESPFFTAARGF 286
           MLR+AGR+LSSS + R ++                            ++ S F    RGF
Sbjct: 1   MLRIAGRKLSSSAAARSSSAFFTRNPFTFTDDSSSPTRSPSPT----SLASQFLDQFRGF 56

Query: 287 SSAETLVPRNQDAGLVELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYFVLSGG 466
           SS  ++ P +Q   + +LPATVAA+KNP+SKI+YD  NHERYPPGDPSKRAFAYFVL+GG
Sbjct: 57  SS-NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGG 115

Query: 467 RFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           RFVYAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 116 RFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGT 157



to top

>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 1) (RISP1) (Fragment)
          Length = 258

 Score =  142 bits (357), Expect = 1e-33
 Identities = 78/116 (67%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
 Frame = +2

Query: 248 AIESPFFTAARGFSSAETLVPRNQDAGLV-ELPATVAALKNPNSKILYDQYNHERYPPGD 424
           ++ S F    RGFSS    V    D GLV +LP TVAA+KNP SKI+YD++NHERYPPGD
Sbjct: 34  SLASVFLHHTRGFSSNS--VSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGD 91

Query: 425 PSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           PSKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 92  PSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGT 147



to top

>UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 4) (RISP4)
          Length = 236

 Score =  141 bits (355), Expect = 2e-33
 Identities = 77/116 (66%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
 Frame = +2

Query: 248 AIESPFFTAARGFSSAETLVPRNQDAGLV-ELPATVAALKNPNSKILYDQYNHERYPPGD 424
           ++ S  F+   GFSS    V    D GLV +LP TVAA+KNP SKI+YD++NHERYPPGD
Sbjct: 12  SVTSNSFSIISGFSSNS--VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGD 69

Query: 425 PSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           PSKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSSIEPG+
Sbjct: 70  PSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGT 125



to top

>UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 231

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 440 FAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           F+YF++     + A+           +MSAS DVLA+A +EVDL++I  G
Sbjct: 70  FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEG 119



to top

>UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 215

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +2

Query: 434 RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           R++AYF++     + ++           SM+A+ DVLA+A +EV+L++I  G
Sbjct: 53  RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLG 104



to top

>UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +      A            SMSAS DVLA+A +E++LS I  G
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASADVLAMAKIEINLSDIPEG 162



to top

>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +      A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           ++++F+Y V +      A            SMSAS DVLA+A +EV LS I  G
Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEG 162



to top

>UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +      A            SMSAS DVLA+A +E++LS I  G
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASADVLAMAKIEINLSDIPEG 162



to top

>UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V        A            SMSAS DVLALA +E+ LS I  G
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDIPEG 162



to top

>UCRI_RHOSH (Q02762) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 187

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           ++R F Y+  +G   V               M+ S DV ALAS+ VD+SS+EPG
Sbjct: 10  TRRDFLYYATAGAGAV---ATGAAVWPLINQMNPSADVQALASIFVDVSSVEPG 60



to top

>UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 190

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGS 592
           ++R F Y+  +G   V A             M+ S DV ALAS++VD+S +E G+
Sbjct: 14  TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGT 65



to top

>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) (Liver regeneration-related
           protein LRRGT00195)
          Length = 274

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS I  G
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEG 162



to top

>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) [Contains:
           Ubiquinol-cytochrome c reductase 8 kDa protein (Complex
           III subunit IX)]
          Length = 274

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
 Frame = +2

Query: 254 ESPFFTAARGFSSAETLVPRNQDAGLVELPATV-----AALKNPNSKILYDQYNHERYPP 418
           ESP     R     E+L  R Q AG   L A+V     A+++  ++ I    ++  R P 
Sbjct: 39  ESPVLDLKRSVLCRESL--RGQAAGR-PLVASVSLNVPASVRYSHTDIKVPDFSDYRRPE 95

Query: 419 ----------GDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVD 568
                        +++ F+Y V +      A            SMSAS DVLA++ +E+ 
Sbjct: 96  VLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIK 155

Query: 569 LSSIEPG 589
           LS I  G
Sbjct: 156 LSDIPEG 162



to top

>MBTP1_RAT (Q9WTZ3) Membrane-bound transcription factor site 1 protease|
           precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1
           protease) (Subtilisin/kexin isozyme 1) (SKI-1)
          Length = 1052

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +2

Query: 287 SSAETLVPRNQD-AGLVELPATVAALKNP--NSKILYDQYNHERYPPG 421
           S AET +    +    V+LP  V  +  P  + ++L+DQY++ RYPPG
Sbjct: 589 SPAETELKNGAEHTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPG 636



to top

>UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS I  G
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEG 162



to top

>UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G
Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEG 162



to top

>MBTP1_MOUSE (Q9WTZ2) Membrane-bound transcription factor site 1 protease|
           precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1
           protease) (Subtilisin/kexin isozyme 1) (SKI-1)
           (Sterol-regulated luminal protease)
          Length = 1052

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +2

Query: 287 SSAET-LVPRNQDAGLVELPATVAALKNP--NSKILYDQYNHERYPPG 421
           S AET L    +    V+LP  V  +  P  + ++L+DQY++ RYPPG
Sbjct: 589 SPAETELHSGAEHTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPG 636



to top

>MBTP1_HUMAN (Q14703) Membrane-bound transcription factor site 1 protease|
           precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1
           protease) (Subtilisin/kexin-isozyme 1) (SKI-1)
          Length = 1052

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 317 QDAGLVELPATVAALKNP--NSKILYDQYNHERYPPG 421
           +    V+LP  V  +  P  + ++L+DQY++ RYPPG
Sbjct: 600 EQTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPG 636



to top

>MBTP1_CRIGR (Q9Z2A8) Membrane-bound transcription factor site 1 protease|
           precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1
           protease) (Subtilisin/kexin-isozyme 1) (SKI-1)
           (Sterol-regulated luminal protease)
          Length = 1052

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 287 SSAETLVPRNQD-AGLVELPATVAALKNP--NSKILYDQYNHERYPPG 421
           S AET      +    V+LP  V  +  P  + ++L+DQY++ RYPPG
Sbjct: 589 SPAETEAKNGAEHTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPG 636



to top

>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 228

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +2

Query: 287 SSAETLVPRNQDAG-----LVELPATVAALKNPNSKILYDQYNHERYPPGDPSKRAFAYF 451
           SS   L+P +  A      ++ +P   +     +S  + D   ++    GD S R  +Y 
Sbjct: 13  SSLRRLLPVSSTASSLKGSMMTIPKFTSIRTYTDSPEMPDFSEYQTKSTGDRS-RVISYA 71

Query: 452 VLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           ++     + A+           S SAS DVLA++  EVDLS I  G
Sbjct: 72  MVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEG 117



to top

>UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G
Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLSDIPEG 162



to top

>UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 428 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS I  G
Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEG 162



to top

>ISPD_CHLCV (Q824I4) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 212

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +2

Query: 251 IESPFFTAARGFSSAE--TLVPRNQDAGLVELPATVAALKNPNSKILYDQ 394
           +++   +A   F+S E  TLV   Q A L+++P ++ + K+P  KI Y +
Sbjct: 154 VKTEILSAGLEFASREGITLVDDTQAAELLDIPVSLVSSKHPQIKITYPE 203



to top

>UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 177

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +2

Query: 518 SMSASKDVLALASLEVDLSSIEPG 589
           S + S DVLAL+S+EVDLS+I  G
Sbjct: 40  SFNPSADVLALSSIEVDLSNIAIG 63



to top

>TOP2_MIMIV (Q5UQE6) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1263

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +2

Query: 251 IESPFFTAARGFSSAETLVPRNQDAGLVELPATVAALKNPNSKILYDQYNHERYPPGDPS 430
           IES F        S +T  P+N+D     +    A  +  + KI  + YN + Y   DPS
Sbjct: 655 IESEFIEEESDIIS-DTYKPKNKDISEDAMTLAFAGGREDDRKIWINTYNPDNYL--DPS 711

Query: 431 KRAFAYF 451
           K+  +Y+
Sbjct: 712 KKRISYY 718



to top

>UCRI_RHORU (P23136) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC|
           1.10.2.2) (Rieske iron-sulfur protein) (RISP)
          Length = 182

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 413 PPGDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPG 589
           P G+ S+R F  +   G   V A             M+ + D LALAS EVD+S+I  G
Sbjct: 10  PGGESSRRDFLIY---GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEG 65



to top

>DNAJ_MYCPU (Q98PI9) Chaperone protein dnaJ|
          Length = 377

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 311 RNQDAGLVELPATVAALKNPNSKILYDQYNHE 406
           +  +A + E+      L NP  K +YD+Y HE
Sbjct: 41  KESEAKMREINEAYEVLSNPEKKAIYDKYGHE 72



to top

>SAPA_HAEIN (P45285) Peptide transport periplasmic protein sapA precursor|
          Length = 565

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = +2

Query: 254 ESPFFTAARGFSSAETLVPRNQDAG-----LVELPATVAALKNPNSKILYDQYNHERYPP 418
           ++P+FT  R F++ + +   N+  G     L  L  T     NP  ++ ++Q    R+P 
Sbjct: 108 QTPWFTPTRDFNAEDVVFSINRVLGGHNTYLPTLAETNVTYSNPQYRVFHEQARKVRFPY 167

Query: 419 GDPSK 433
            D  K
Sbjct: 168 FDSIK 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,349,641
Number of Sequences: 219361
Number of extensions: 1249462
Number of successful extensions: 3585
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3578
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top