ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart37c07 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 283 bits (723), Expect = 3e-76 Identities = 135/159 (84%), Positives = 143/159 (89%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKFEHPRHGSLGFLPRKR SRHRGKVK+FP+DD SK CHLT+F+GYKAGMTHIVREVE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVE 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 KPGSKLHKKETCEA GLVAYVKTPRG R+LNSVWAQHLSE+VRRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYA++V Sbjct: 121 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIV 159
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 262 bits (670), Expect = 4e-70 Identities = 125/159 (78%), Positives = 136/159 (85%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DDQ+K C TAF+GYKAGMTHIVREVE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVE 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 KPGSKLHKKETCEA G+VAYVKTPRG R+LN+VWAQHLSE+VRRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFT YA +YDS+ GKK IQ QLEKMKKYATV+ Sbjct: 121 WAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVI 159
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 251 bits (640), Expect = 1e-66 Identities = 117/159 (73%), Positives = 135/159 (84%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD +K C LT+FLGYKAGMTHIVR+VE Sbjct: 1 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVE 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 KPGSKLHKKETCEA G+V YVKTPRG R+L +VWAQHLSE++RRRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFT+Y+ K++++ GKK+IQ QLEKMKKY +V+ Sbjct: 121 WAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVI 159
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 216 bits (549), Expect = 4e-56 Identities = 101/159 (63%), Positives = 121/159 (76%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE EA G+V YV+TPRG RT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY K+ D GKK+++ MKKY V+ Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVI 159
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 216 bits (549), Expect = 4e-56 Identities = 101/159 (63%), Positives = 121/159 (76%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE EA G+V YV+TPRG RT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY K+ D GKK+++ MKKY V+ Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVI 159
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 214 bits (545), Expect = 1e-55 Identities = 104/159 (65%), Positives = 123/159 (77%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SH KFE PRHGSLGFLPRKR SR RGKVKAFP+DD SK HLTAFLGYKAGMTHIVR+++ Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK+HK+E EA G+V YV+TPRG R+L +VWA+HLSE+V+RRFYKN Sbjct: 61 RPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKYA KY + I +LE++KKY +VV Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVV 157
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 214 bits (545), Expect = 1e-55 Identities = 104/159 (65%), Positives = 123/159 (77%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SH KFE PRHGSLGFLPRKR SR RGKVKAFP+DD SK HLTAFLGYKAGMTHIVR+++ Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK+HK+E EA G+V YV+TPRG R+L +VWA+HLSE+V+RRFYKN Sbjct: 61 RPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKYA KY + I +LE++KKY +VV Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVV 157
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 213 bits (543), Expect = 2e-55 Identities = 100/159 (62%), Positives = 121/159 (76%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE EA G+V YV+TPRG RT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY K+ + GKK+++ MKKY V+ Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI 159
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 212 bits (539), Expect = 6e-55 Identities = 99/159 (62%), Positives = 120/159 (75%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE EA G+V YV+TPRG RT +++A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY K+ GKK+++ MKKY V+ Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVI 159
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 211 bits (536), Expect = 1e-54 Identities = 99/159 (62%), Positives = 120/159 (75%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGSLGFLPRKR SRHRGKVK+FP+DD SK HLTAFLGYKAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE A G+V YV+TPRG RT +V+A+H+S++ +RRFYKN Sbjct: 61 RPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY K+ + GKK+++ MKKY V+ Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI 159
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 206 bits (524), Expect = 4e-53 Identities = 97/160 (60%), Positives = 123/160 (76%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHGSL FLPRKR +RHRGKVK+FP+DD K HLTA +GYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PG+K+HKKE EA G+V Y++TPRG R+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKYA K+ + G I +LE++KKY TVV Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVV 159
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 205 bits (522), Expect = 6e-53 Identities = 97/160 (60%), Positives = 124/160 (77%), Gaps = 1/160 (0%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKFE PRHG+LGF PRKR +RH+GKVK+FP+DD+++K HLTAF+GYKAGMTH+VR++E Sbjct: 1 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLE 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 KPGSK+HKKE EA GLV YV+T +G +T +VWAQHLS++ RRR YKN Sbjct: 61 KPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN 120 Query: 435 WCKSK-KKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSK KKAFTKY +Y+++ GKK I+ L+ +KK +VV Sbjct: 121 WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVV 160
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 205 bits (521), Expect = 8e-53 Identities = 94/160 (58%), Positives = 117/160 (73%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRKF PRHG +GF P+KR +RG++KAFP+DD+SK HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 +KPGSK++KKE EA G+ YV TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + + Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSI 160
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 204 bits (519), Expect = 1e-52 Identities = 98/160 (61%), Positives = 121/160 (75%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHGSL +LPRKR +RHRGKVK+FP+DD K HLTA +GYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PG+K HKKE EA GLV Y++TPRG R+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKY K+ SD I +LE++KKY TVV Sbjct: 121 NWYKSKKKAFTKYVKKH-SDNNGAAITRELERIKKYCTVV 159
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 204 bits (518), Expect = 2e-52 Identities = 93/160 (58%), Positives = 116/160 (72%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRKF PRHG +GF P+KR +RG++KAFP+DD SK HLTAFLGYKAGMTHIVR+V Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 +KPGSK++KKE EA G+ Y+ TP+G R L ++WA+HLSE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKYA K+ + GKK I+ K+KKY + + Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSI 160
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 203 bits (516), Expect = 3e-52 Identities = 95/159 (59%), Positives = 115/159 (72%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGS+GF P+KR RHRGKVKAFP+DD +K HLTAF+ +KAGMTHIVREV+ Sbjct: 1 SHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 KPGSK++KKE EA G+V Y+ TPRG R +VWA+HLSED R RFYKN Sbjct: 61 KPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W SKKKAF K+A K+ + G+K I+ L KMKKY + + Sbjct: 121 WHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKI 159
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 202 bits (515), Expect = 4e-52 Identities = 97/160 (60%), Positives = 124/160 (77%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHGSLGFLPRKR + RG+VK+FP+D +SK LTAFLGYKAGMT +VR++ Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PGSK+HK+E EA G+V YV+TPRG R+L +VWA+HLSE+VRRRFYK Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKY+ KY D +++ +L ++KKYA+VV Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--QVERELARIKKYASVV 158
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 202 bits (514), Expect = 5e-52 Identities = 96/159 (60%), Positives = 114/159 (71%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHGS+ F P+KR +RHRGKVKAFP+DD SK HLT F+GYKAGMTHIVRE + Sbjct: 1 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK++KKE EA G V Y++TP G R L +VWAQHLSE+ RRRFYKN Sbjct: 61 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTK + K+ D GKK I+ KM +Y V+ Sbjct: 121 WYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 159
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 201 bits (511), Expect = 1e-51 Identities = 97/160 (60%), Positives = 123/160 (76%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHG LGFLPRKR + RG+VK+FP+DD+SK LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PGSK HK+E EA G+V YV+TPRG R+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKY+ KY + EI+ +L ++KKYATVV Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVV 158
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 196 bits (499), Expect = 3e-50 Identities = 93/160 (58%), Positives = 122/160 (76%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHG LGFLPRKR + RG+VK+FP+DDQ+K LT+FLGYKAGM+ IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PGSK HK+E EA G+V YV+TPRG R+L +VWA+HLS++V+RRFYK Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFTKY+ KY + ++ +L ++KKYA+VV Sbjct: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKYASVV 158
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 196 bits (498), Expect = 4e-50 Identities = 95/159 (59%), Positives = 120/159 (75%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRK+E PRHG LGFLPRKR + R +VKAFP+DD+SK LT+FLGYKAGMT IVR+++ Sbjct: 1 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PGSK HK+E EA G+V YV+TPRG R+L +VWA+HLS++V+RRFYKN Sbjct: 61 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTKY+ KY D I+ +L ++KKYA+VV Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVV 157
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 187 bits (476), Expect = 1e-47 Identities = 90/159 (56%), Positives = 110/159 (69%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHG LGFLP KR RHRGKVK +PRDD S+ HLTAFLGYKAGMTH +REV Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PG K+ K+E EA G+V YV TPRG R+ +++A+HLS++ RRRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTK ++ GKK++Q MKKY V+ Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVI 159
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 187 bits (476), Expect = 1e-47 Identities = 91/160 (56%), Positives = 119/160 (74%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 MSHRK+E PRHG LGFLPRKR + RG+VKAFP+DD+SK LT+FLGYKAGMT IVR++ Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYK 431 ++PGSK HK+E EA G+V Y++TPRG R+L +VWA+HLS++++RRFYK Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120 Query: 432 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 NW KSKKKAFT+ + G I+ +L ++KKYA+VV Sbjct: 121 NWYKSKKKAFTQVPPPSTAQDG-AAIERELARIKKYASVV 159
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 187 bits (475), Expect = 2e-47 Identities = 90/159 (56%), Positives = 110/159 (69%) Frame = +3 Query: 75 SHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVE 254 SHRKF PRHG LGFLP KR RHRGKVK +PRDD S+ HLTAFLGYKAGMTH +REV Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 255 KPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKN 434 +PG K+ K+E EA G+V YV TPRG R+ +++A+HLS++ RRRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 435 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 W KSKKKAFTK ++ GKK++Q MKKY V+ Sbjct: 121 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVI 159
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 97.1 bits (240), Expect = 3e-20 Identities = 57/130 (43%), Positives = 72/130 (55%), Gaps = 1/130 (0%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVR-E 248 MS RKF PRHGSL F PRKR R AFP DD+S+ HLT F+ YKAGMTH+VR + Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60 Query: 249 VEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFY 428 + +K +E +A G+V Y KT G R L V A ++S+ V RR + Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120 Query: 429 KNWCKSKKKA 458 N SK+ A Sbjct: 121 GNRYASKESA 130
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 67.8 bits (164), Expect = 2e-11 Identities = 46/156 (29%), Positives = 69/156 (44%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 + PR GS+ F PRKR +R +VK++P+ D+ L A GYKAGMTH++ + Sbjct: 3 RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEP---GLLALAGYKAGMTHVMMVDNQKN 59 Query: 264 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRFYKNWCK 443 S E + Y KT RG +TL V A +D+RR+ Sbjct: 60 SPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK------- 112 Query: 444 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVV 551 T A YD +A ++I+ +E + +V Sbjct: 113 -----LTPPADDYDQEAAIEKIRSNMEYVADVRVIV 143
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 67.4 bits (163), Expect = 3e-11 Identities = 47/119 (39%), Positives = 58/119 (48%), Gaps = 2/119 (1%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 M RK PR GSLGF PRKR SR +VK +P D K L AFLGY+AGMTH+ Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTP-RGHRTLNSVWAQHLSE-DVRRR 422 ++PG KE + Y P RG +L WAQ E +++RR Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 65.5 bits (158), Expect = 1e-10 Identities = 39/113 (34%), Positives = 55/113 (48%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GSL F PRKR + K++++P D KK L AF YKAG TH + P Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60 Query: 264 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRR 422 S + +E G+ AY KT +G + L VWA+ +++ R+ Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRK 113
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 65.1 bits (157), Expect = 1e-10 Identities = 38/114 (33%), Positives = 55/114 (48%) Frame = +3 Query: 54 GKEGRRMSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMT 233 G+ GRR R PR GSL F PRKR SR +++++P ++ + + F GYKAGMT Sbjct: 2 GRGGRRNPGR----PRRGSLAFSPRKRASRPVPRIRSWPDEE---RVRVQGFAGYKAGMT 54 Query: 234 HIVREVEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQ 395 H + + P S +E + AY TP G+R + WA+ Sbjct: 55 HAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE 108
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/108 (35%), Positives = 48/108 (44%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 PR GSLGF PRKR + + ++P DD + F GYKAGMTH+V ++P S Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQP--GVQGFAGYKAGMTHVVLVNDEPNSPRE 63 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRR 419 E L AY TP G R L VW ++ R Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDR 111
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 62.8 bits (151), Expect = 6e-10 Identities = 37/108 (34%), Positives = 48/108 (44%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 PR GS+GF PRKR + ++P DD + L F GYKAGMTH+V +K + Sbjct: 6 PRKGSMGFSPRKRAESEVPRFNSWPADD--GEVGLQGFAGYKAGMTHVVLVDDKANAPTE 63 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRR 419 ET + Y TP G + L VWA E + R Sbjct: 64 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR 111
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 61.6 bits (148), Expect = 1e-09 Identities = 35/113 (30%), Positives = 53/113 (46%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K+ PR GSL F PRKR +++A+P D + + F GYKAGMTH+V ++ Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECD---RVRMQGFAGYKAGMTHVVMIDDRKN 58 Query: 264 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRR 422 S + +E + Y KT G + VW+ +L + + RR Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRR 111
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 61.2 bits (147), Expect = 2e-09 Identities = 40/114 (35%), Positives = 54/114 (47%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 M HRK PR GS G PRKR S +++P QS + L F+GYK GM+HI Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTI-QSNEPKLLGFVGYKVGMSHIFMID 59 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDV 413 +KP S + KE + AYV P+G T + + +SED+ Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDL 113
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 59.7 bits (143), Expect = 5e-09 Identities = 33/109 (30%), Positives = 48/109 (44%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 P+ GSL F PRKR H + +A+P K L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDTKNSLTQ 64 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRR 422 E + AY + G + + VWA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR 113
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 58.5 bits (140), Expect = 1e-08 Identities = 37/113 (32%), Positives = 53/113 (46%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GSL + PRKR +++++P+D + + + F GYKAGMTHI+ + PG Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSEVR---MLGFAGYKAGMTHILMIDDSPG 59 Query: 264 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRR 422 KE G+ AY + G T VW L ++V RR Sbjct: 60 -LTKGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARR 111
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 57.4 bits (137), Expect = 3e-08 Identities = 32/109 (29%), Positives = 47/109 (43%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 P+ GSL F PRKR H + +A+P K L +F GYK GMTH++ + S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDIKNSLTQ 64 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRR 422 E + AY + G + + WA L +++RR Sbjct: 65 GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRR 113
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 55.5 bits (132), Expect = 1e-07 Identities = 47/149 (31%), Positives = 62/149 (41%), Gaps = 1/149 (0%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 M HRK PR GS G PRKR K +P + K+ L F+GYKAGMTH+ Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNL-KEPKLLGFIGYKAGMTHVYMID 59 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGH-RTLNSVWAQHLSEDVRRRFY 428 +KP S + KE L AY +G L WA F Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWA---------NFE 110 Query: 429 KNWCKSKKKAFTKYALKYDSDAGKKEIQM 515 + K K+ T +LK DS K+++ + Sbjct: 111 EGSLKYLKRKIT--SLKVDSSKMKEKLDL 137
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 55.5 bits (132), Expect = 1e-07 Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 2/114 (1%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GS+G PRKR + +V+ +P + K L F YKAGM H V ++P Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62 Query: 264 SKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRG--HRTLNSVWAQHLSEDVRR 419 S L+ KE +A G Y P R + VWA L + + R Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHR 116
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 54.7 bits (130), Expect = 2e-07 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 PR GSL F PRKR R +++++P +D + L AF YKAGM+H + + P S Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDTVR---LQAFPVYKAGMSHAFIKEDNPKSPNA 64 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGH-RTLNSVWAQHLSEDVRRR 422 +E + Y + R + TL VWA +L +++ R+ Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERK 114
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 53.1 bits (126), Expect = 5e-07 Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 8/146 (5%) Frame = +3 Query: 72 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 251 M HRK PR GS G PRKR S + +P+ + S+ L F+GYK GMTH+ Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQIN-SQNPKLLGFVGYKVGMTHVFMID 59 Query: 252 EKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGH-RTLNSVWAQHLSE--DVRRR 422 + P S + KE L AY +G + W+ + D+ RR Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119 Query: 423 FY--KNWCK---SKKKAFTKYALKYD 485 + ++ K SKKK ++ K D Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLD 145
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 53.1 bits (126), Expect = 5e-07 Identities = 25/60 (41%), Positives = 38/60 (63%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GSLGF PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/60 (40%), Positives = 37/60 (61%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GSL F PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/60 (40%), Positives = 37/60 (61%) Frame = +3 Query: 84 KFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 263 K PR GSL F PRKR +++++P++ + + + F GYKAGMTHI+ ++PG Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 48.9 bits (115), Expect = 9e-06 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 2/122 (1%) Frame = +3 Query: 96 PRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLH 275 PR GS+GF PRKR SR ++K +P+ ++ K AF YK GMTH + + G ++ Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKP---LAFAAYKVGMTHTILNIN--GERVF 63 Query: 276 KKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLSEDVRRRF--YKNWCKSK 449 T G AY K + ++S++ L + V R+ KN+ + Sbjct: 64 TPVT-----VLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPKLKNYNFEE 118 Query: 450 KK 455 KK Sbjct: 119 KK 120
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 36.2 bits (82), Expect = 0.063 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +3 Query: 93 HPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHI 239 H R GS+ + PR R +++++P + S + F G+K GMTH+ Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHV 52
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 36.2 bits (82), Expect = 0.063 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 93 HPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHI 239 H R GS+ + PR R K++++P K + F G+K GMTH+ Sbjct: 6 HSRRGSMAYYPRVRAKSVDPKIRSWPEIKGEVK--VQGFAGFKVGMTHV 52
>COTG_BACSU (P39801) Spore coat protein G| Length = 195 Score = 34.3 bits (77), Expect = 0.24 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 2/146 (1%) Frame = +3 Query: 51 QGKEGRRMSHRKFEHPRHGSLGFLPRKRCS--RHRGKVKAFPRDDQSKKCHLTAFLGYKA 224 Q G++ SH+K H H + CS + R K+F +S+ H ++ +K Sbjct: 27 QEPHGKKRSHKK-SHRTHKKSRSHKKSYCSHKKSRSHKKSFCSHKKSRS-HKKSYCSHKK 84 Query: 225 GMTHIVREVEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRGHRTLNSVWAQHLS 404 +H K + HKK +Y K+ R ++ S + S Sbjct: 85 SRSH------KKSYRSHKKSRSYKKSYRSYKKSR-----SYKKSCRSYKKSRSYKKSYCS 133 Query: 405 EDVRRRFYKNWCKSKKKAFTKYALKY 482 + R YK C++ KK++ + Y Sbjct: 134 HKKKSRSYKKSCRTHKKSYRSHKKYY 159
>ARRC_XENLA (P51483) Arrestin-C (Cone arrestin)| Length = 387 Score = 33.5 bits (75), Expect = 0.41 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = -2 Query: 296 SLTCLLLVQLGTRLLDLTHNVSH------ASLVAKEGSEVAFLGLVISGESLHLSAVARA 135 SLT LL R L L + H +S + + G + LG+++S + VAR Sbjct: 272 SLTPLLANNKEKRGLALDGKLKHGDTNLASSTILRPGMDKEVLGMLVSYKVRVSLVVARG 331 Query: 134 TLPGEETEGSVSRVLELTVRHPSP 63 + G+ T VS L T+ HP P Sbjct: 332 GILGDLTSSDVSVELPFTLMHPKP 355
>SSH2_MOUSE (Q5SW75) Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-2L) (mSSH-2L) Length = 1423 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 18/70 (25%) Frame = +1 Query: 67 EGCRTVSSSTRDTD------------PSVSS-----PGSVARATAE-R*RLSPEMTNPRN 192 EGC T SST D + P + S PGSV RAT E RL E N Sbjct: 827 EGCLTTHSSTADLEEEEPVEGEHDWGPGMHSGAKWCPGSVRRATLEFEERLRQEQENHGT 886 Query: 193 ATSLPSLATR 222 A++ P+L+ R Sbjct: 887 ASAGPTLSNR 896
>ARRB1_RAT (P29066) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -2 Query: 227 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 63 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_MOUSE (Q8BWG8) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -2 Query: 227 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 63 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_HUMAN (P49407) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -2 Query: 227 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 63 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>ARRB1_BOVIN (P17870) Beta-arrestin-1 (Arrestin, beta 1)| Length = 418 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -2 Query: 227 ASLVAKEGSEVAFLGLVISGESLHLSAVARATLPGEETEGSVSRVLELTVRHPSP 63 +S + +EG+ LG+++S + V+R L G+ V+ L T+ HP P Sbjct: 302 SSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKP 356
>COBT_METCH (Q9X7F4) Nicotinate-nucleotide--dimethylbenzimidazole| phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) Length = 342 Score = 30.0 bits (66), Expect = 4.5 Identities = 19/70 (27%), Positives = 28/70 (40%) Frame = -1 Query: 222 PCSQGRQ*GGISWIGHLWGKPSPFRGGASNASWGGNRGIRVSGARTYGATSFSLPSPVEV 43 P S GR + W+ GK P A+ + GN G+ G Y P+ V Sbjct: 41 PGSLGRLEAIVEWLAAWQGKSPPVLESAAAVVFAGNHGVAKHGVSAY-------PAEVTA 93 Query: 42 EVEAAADGGG 13 ++ A + GG Sbjct: 94 QMVANFEAGG 103
>YD428_YEAST (Q04066) Serine hydrolase YDR428C (EC 3.1.-.-)| Length = 261 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = +1 Query: 100 DTDPSVSSPGSVARATAER*RLSPEMTNPRNATSLPSLATRL 225 +T S+ + +V + + E RLSPE+TNPRN S TRL Sbjct: 55 NTIKSMDTESTVCQYSIEY-RLSPEITNPRNLYDAVSNITRL 95
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 29.6 bits (65), Expect = 5.9 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Frame = -1 Query: 294 PHMSPSCAAWNQASRPHAQCES-CQPCSQGRQ*GG------ISWIGHLWGKP-----SP- 154 PH+ PSC + N R C C PC G GG I GH G SP Sbjct: 574 PHIRPSCTSDNDNGRQSEDCRRVCSPCPLGV--GGHQNTHHIQSNGHAQGHALVPAISPR 631 Query: 153 --FRGGASNASWGGNRGIRVSGARTYGATS 70 F G+ A + +S + +YGA + Sbjct: 632 LNFNSGSFGAMYSNMHHTALSMSDSYGAVT 661
>ISU1_KLULA (Q6CRQ9) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 180 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = +1 Query: 64 GEGCRTVS-SSTRDTDPSVSSPGSVARATAER*RLSPEMTNPRNATS----LPSLATRLA 228 G G R + ++ R T P+V S S+A A ++ TNPRN S LP++ T L Sbjct: 21 GGGTRIIGVAAARATAPTVGSSPSMASARFYHPKVIDHYTNPRNVGSLDKNLPNVGTGLV 80 Query: 229 *LTLC 243 C Sbjct: 81 GAPAC 85
>YE5A_SCHPO (O14174) Hypothetical protein C4D7.10c in chromosome I| Length = 473 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 77 AP*VRAPETRIPRFPPQEALLAPPRKGEGFPQR*PIQEMPPH 202 AP R +I R PP + PP+ + FP E PP+ Sbjct: 335 APVQRKTTPKIQRLPPSSIQIPPPKPMQKFPANAASSESPPN 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,751,298 Number of Sequences: 219361 Number of extensions: 1476887 Number of successful extensions: 5136 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 4874 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5102 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
