ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart37c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 842 bits (425), Expect = 0.0 Identities = 467/481 (97%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 atgtcgcaccgtaagttcgagcacccgaggcacggatccctcggtttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 61 cggtgctcgcgccaccgcggaaaggtgaaggcctttcccagagatgaccaatccaagaaa 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 121 tgccaccttactgccttccttggctacaaggctgggatgacccacattgtgcgtgaggtt 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gagaagcctggttccaagctacacaagaaggagacatgtgaggctgtcaccattgttgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 241 acacccccgattgttattgttggactggttgcctatgtgaagactcctcgtggccttcgt 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 301 actctcaactctgtctgggcacagcatctcagcgaagatgtcaggagaaggttctacaag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggccttcaccaagtatgctctgaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 480 Query: 552 c 552 | Sbjct: 481 c 481
>gb|AY347532.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 842 bits (425), Expect = 0.0 Identities = 467/481 (97%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 atgtcgcaccgtaagttcgagcacccgaggcacggatccctcggtttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 61 cggtgctcgcgccaccgcggaaaggtgaaggcctttcccagagatgaccaatccaagaaa 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 121 tgccaccttactgccttccttggctacaaggctgggatgacccacattgtgcgtgaggtt 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gagaagcctggttccaagctacacaagaaggagacatgtgaggctgtcaccattgttgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 241 acacccccgattgttattgttggactggttgcctatgtgaagactcctcgtggccttcgt 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 301 actctcaactctgtctgggcacagcatctcagcgaagatgtcaggagaaggttctacaag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggccttcaccaagtatgctctgaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 480 Query: 552 c 552 | Sbjct: 481 c 481
>gb|AY343330.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 513 bits (259), Expect = e-142 Identities = 415/467 (88%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atgtcgcaccgcaagttcgagcacccgaggcacggttccctcggcttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||| ||||||||||||||||||||| | ||||||| ||||||||| ||| Sbjct: 61 cgctgctctcgccaccgcggaaaggtgaagtccttccccaaggatgaccaacagaagcct 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 ||||||||||||||||| || |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 tgccacctcactgcctttctgggctacaaggctggaatgacccacattgttcgtgaggtc 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||| || |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 181 gagaagcccggatccaagctccacaagaaggaaacctgtgaggctgttaccatcattgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 || || ||| | || |||||||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 241 acccctcctctggtcattgttggtcttgtggcctatgtgaagaccccacgtggccttcgc 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 301 actctcaactctgtctgggctcagcaccttagcgaagatgtgaggagaaggttctataag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggcgttcacaaagtatgccctcaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagta 538 || |||||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 421 gcaggcaagaaggaaatccagttgcagcttgagaaaatgaagaagta 467
>gb|AY343327.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 513 bits (259), Expect = e-142 Identities = 415/467 (88%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atgtcgcaccgcaagttcgagcacccgaggcacggttccctcggcttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||| ||||||||||||||||||||| | ||||||| ||||||||| ||| Sbjct: 61 cgctgctctcgccaccgcggaaaggtgaagtccttccccaaggatgaccaacagaagcct 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 ||||||||||||||||| || |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 tgccacctcactgcctttctgggctacaaggctggaatgacccacattgttcgtgaggtc 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||| || |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 181 gagaagcccggatccaagctccacaagaaggaaacctgtgaggctgttaccatcattgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 || || ||| | || |||||||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 241 acccctcctctggtcattgttggtcttgtggcctatgtgaagaccccacgtggccttcgc 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 301 actctcaactctgtctgggctcagcaccttagcgaagatgtgaggagaaggttctataag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggcgttcacaaagtatgccctcaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagta 538 || |||||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 421 gcaggcaagaaggaaatccagttgcagcttgagaaaatgaagaagta 467
>gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 502 bits (253), Expect = e-139 Identities = 424/481 (88%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atgtcgcaccgcaagttcgagcacccgaggcacggctccctcggcttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||| ||||||||||||||||||||| | ||||||| ||||||||| ||| Sbjct: 61 cgctgctctcgccaccgcggaaaggtgaagtccttccccaaggatgaccaacagaagcct 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 tgccatctcactgccttcctgggctacaaggctggaatgacccacattgttcgtgaggtc 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||| || |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 181 gagaagcccggatccaagctccacaagaaggaaacctgtgaggctgttaccatcattgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 || || ||| | || |||||||| ||||| |||||||||||||| ||||| |||| ||| Sbjct: 241 acccctcctctggtcattgttggtcttgtggcctatgtgaagacccctcggggccttcgc 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 |||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 301 actctcaactctgtctgggctcagcaccttagtgaagatgtgaggagaaggttctacaag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggcgttcacaaagtatgccctcaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 551 | || ||||| ||||||||| ||||||||||||| ||||||||||| || ||| ||||| Sbjct: 421 tcaggaaagaaggaaatccagttgcagcttgagaaaatgaagaagtacgccactattgtc 480 Query: 552 c 552 | Sbjct: 481 c 481
>gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 502 bits (253), Expect = e-139 Identities = 424/481 (88%) Strand = Plus / Plus Query: 72 atgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaag 131 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 1 atgtcgcaccgcaagttcgagcacccgaggcacggctccctcggcttcctccccaggaag 60 Query: 132 cgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaaa 191 || ||||| ||||||||||||||||||||| | ||||||| ||||||||| ||| Sbjct: 61 cgctgctctcgccaccgcggaaaggtgaagtccttccccaaggatgaccaacagaagcct 120 Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 tgccatctcactgccttcctgggctacaaggctggaatgacccacattgttcgtgaggtc 180 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||| || |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 181 gagaagcccggatccaagctccacaagaaggaaacctgtgaggctgttaccatcattgag 240 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 || || ||| | || |||||||| ||||| |||||||||||||| ||||| |||| ||| Sbjct: 241 acccctcctctggtcattgttggtcttgtggcctatgtgaagacccctcggggccttcgc 300 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 |||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 301 actctcaactctgtctgggctcagcaccttagtgaagatgtgaggagaaggttctacaag 360 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 361 aactggtgcaagagcaagaagaaggcgttcacaaagtatgccctcaagtatgacagtgat 420 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtc 551 | || ||||| ||||||||| ||||||||||||| ||||||||||| || ||| ||||| Sbjct: 421 tcaggaaagaaggaaatccagttgcagcttgagaaaatgaagaagtacgccactattgtc 480 Query: 552 c 552 | Sbjct: 481 c 481
>dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040J04, full insert sequence Length = 1403 Score = 496 bits (250), Expect = e-137 Identities = 424/482 (87%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 76 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 135 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 ||| | ||| ||||||||||| ||||||||| | ||||||| |||||| ||| Sbjct: 136 gcgctcctcccgccaccgcggcaaggtgaagtcattccccaaggatgacgtcaacaaacc 195 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 196 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 255 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttga 310 |||||||||||||||||| || |||||||||||||| ||||||||||| |||||| |||| Sbjct: 256 cgagaagcctggttccaaactccacaagaaggagacctgtgaggctgttaccattattga 315 Query: 311 gacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcg 370 |||||| |||||||| ||||||||||||| ||||||||||||||||| |||||| || Sbjct: 316 gacacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacg 375 Query: 371 tactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaa 430 | |||||||||||||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 376 cagtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaa 435 Query: 431 gaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtga 490 ||||||||||||||||||||||||||| |||||||||||||| || |||||||| || || Sbjct: 436 gaactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcga 495 Query: 491 tgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgt 550 ||| |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 496 tgccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgt 555 Query: 551 cc 552 || Sbjct: 556 cc 557
>dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E13, full insert sequence Length = 1486 Score = 496 bits (250), Expect = e-137 Identities = 424/482 (87%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 93 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 152 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 ||| | ||| ||||||||||| ||||||||| | ||||||| |||||| ||| Sbjct: 153 gcgctcctcccgccaccgcggcaaggtgaagtcattccccaaggatgacgtcaacaaacc 212 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 213 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 272 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttga 310 |||||||||||||||||| || |||||||||||||| ||||||||||| |||||| |||| Sbjct: 273 cgagaagcctggttccaaactccacaagaaggagacctgtgaggctgttaccattattga 332 Query: 311 gacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcg 370 |||||| |||||||| ||||||||||||| ||||||||||||||||| |||||| || Sbjct: 333 gacacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacg 392 Query: 371 tactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaa 430 | |||||||||||||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 393 cagtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaa 452 Query: 431 gaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtga 490 ||||||||||||||||||||||||||| |||||||||||||| || |||||||| || || Sbjct: 453 gaactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcga 512 Query: 491 tgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgt 550 ||| |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 513 tgccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgt 572 Query: 551 cc 552 || Sbjct: 573 cc 574
>dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A07, full insert sequence Length = 1433 Score = 488 bits (246), Expect = e-134 Identities = 423/482 (87%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 54 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctccagaggaa 113 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 ||| | ||| ||||||||||| ||||||||| | ||||||| |||||| ||| Sbjct: 114 gcgctcctcccgccaccgcggcaaggtgaagtcattccccaaggatgacgtcaacaaacc 173 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 174 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 233 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttga 310 |||||||||||||||||| || |||||||||||||| ||||||||||| |||||| |||| Sbjct: 234 cgagaagcctggttccaaactccacaagaaggagacctgtgaggctgttaccattattga 293 Query: 311 gacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcg 370 |||||| |||||||| ||||||||||||| ||||||||||||||||| |||||| || Sbjct: 294 gacacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacg 353 Query: 371 tactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaa 430 | |||||||||||||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 354 cagtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaa 413 Query: 431 gaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtga 490 ||||||||||||||||||||||||||| |||||||||||||| || |||||||| || || Sbjct: 414 gaactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcga 473 Query: 491 tgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgt 550 ||| |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 474 tgccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgt 533 Query: 551 cc 552 || Sbjct: 534 cc 535
>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full insert sequence Length = 1468 Score = 460 bits (232), Expect = e-126 Identities = 409/468 (87%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 63 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 122 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 ||| | ||| ||||||||||| ||||||||| | ||||||| |||||| ||| ||| Sbjct: 123 gcgctcctcccgccaccgcggcaaggtgaagtccttccccaaggatgacgtatcaaagcc 182 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 183 ctgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggt 242 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttga 310 |||||||||||| |||||||| ||||||||||| || || |||||||| ||||| | || Sbjct: 243 cgagaagcctggctccaagctccacaagaaggaaacctgcgaggctgttaccatcatcga 302 Query: 311 gacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcg 370 ||| || || |||| ||||||||||| || |||||||| ||||| |||||||| | ||| Sbjct: 303 gacccctccgcttgtcattgttggactcgtggcctatgtcaagacacctcgtggacttcg 362 Query: 371 tactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaa 430 ||||||||||||||||||| ||||| || ||||| || ||| |||||||||||||||| Sbjct: 363 ctctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaa 422 Query: 431 gaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtga 490 |||||||||||| |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 423 gaactggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtga 482 Query: 491 tgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagta 538 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 483 tgctggcaagaaagaaatccagatgcaacttgagaagatgaagaagta 530
>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3, complete cds Length = 1368 Score = 460 bits (232), Expect = e-126 Identities = 409/468 (87%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 21 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 80 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 ||| | ||| ||||||||||| ||||||||| | ||||||| |||||| ||| ||| Sbjct: 81 gcgctcctcccgccaccgcggcaaggtgaagtccttccccaaggatgacgtatcaaagcc 140 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 141 ctgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggt 200 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttga 310 |||||||||||| |||||||| ||||||||||| || || |||||||| ||||| | || Sbjct: 201 cgagaagcctggctccaagctccacaagaaggaaacctgcgaggctgttaccatcatcga 260 Query: 311 gacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcg 370 ||| || || |||| ||||||||||| || |||||||| ||||| |||||||| | ||| Sbjct: 261 gacccctccgcttgtcattgttggactcgtggcctatgtcaagacacctcgtggacttcg 320 Query: 371 tactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaa 430 ||||||||||||||||||| ||||| || ||||| || ||| |||||||||||||||| Sbjct: 321 ctctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaa 380 Query: 431 gaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtga 490 |||||||||||| |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 381 gaactggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtga 440 Query: 491 tgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagta 538 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 441 tgctggcaagaaagaaatccagatgcaacttgagaagatgaagaagta 488
>gb|BT016630.1| Zea mays clone Contig463 mRNA sequence Length = 1432 Score = 458 bits (231), Expect = e-126 Identities = 421/483 (87%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 69 aggatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccagg 128 |||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 59 aggatgtcgcaccgtaagttcgagcacccgaggcacggctccctcggcttccttcccagg 118 Query: 129 aagcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaag 188 ||||| | ||| ||||||||||| ||||||||| | || ||||| ||||||| ||||| Sbjct: 119 aagcgctcctcccgccaccgcggcaaggtgaagtcatttcccagggatgacc---ccaag 175 Query: 189 aaa---tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgt 245 || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 176 aagccttgccatctcactgccttccttggctacaaggctggcatgactcacattgtccgt 235 Query: 246 gaggtcgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccatt 305 ||||| |||||||| || ||||| || || |||||||| || ||||||||||| ||||| Sbjct: 236 gaggttgagaagccaggatccaaactccataagaaggaaacttgtgaggctgttaccatc 295 Query: 306 gttgagacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggc 365 |||| || || ||| |||| |||||||| || || || ||||||||||||||||||||| Sbjct: 296 attgaaacccctcctcttgtcattgttgggctcgtggcatatgtgaagactcctcgtggc 355 Query: 366 catcgtactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttc 425 | || || ||||||||||| ||||| || ||||| |||||||| ||||||||||||||| Sbjct: 356 ctccgcacactcaactctgtttgggcccaacatcttagcgaagaagtgaggagaaggttc 415 Query: 426 tacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgac 485 |||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 416 tacaagaactggtgcaagagcaagaagaaggctttcacaaagtatgctctcaaatatgaa 475 Query: 486 agtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctact 545 | ||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||| || Sbjct: 476 aatgatgctggcaagaaggaaattcagctgcagcttgagaagatgaagaaatatgcttct 535 Query: 546 gtt 548 ||| Sbjct: 536 gtt 538
>gb|AY236158.1| Oryza sativa (indica cultivar-group) ribosomal protein L3B mRNA, partial cds Length = 1035 Score = 452 bits (228), Expect = e-124 Identities = 393/448 (87%) Strand = Plus / Plus Query: 105 ggatccctcggtttcctccccaggaagcgttgctcgcgccaccgcggaaaggtgaaggct 164 ||||||||||| |||||||| |||||||| | ||| ||||||||||| ||||||||| | Sbjct: 1 ggatccctcggcttcctcccgaggaagcgctcctcccgccaccgcggcaaggtgaagtca 60 Query: 165 ttccccagagatgaccaatccaagaaatgccacctcactgccttccttggctacaaggct 224 ||||||| |||||| ||| |||||||||||| |||| | || ||||||||| Sbjct: 61 ttccccaaggatgacgtcaacaaaccatgccacctcacctcctttgtcggttacaaggct 120 Query: 225 ggcatgactcacattgtgcgtgaggtcgagaagcctggttccaagctgcacaagaaggag 284 || ||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 121 ggaatgacccacattgtgcgtgaggtcgagaagcctggttccaaactccacaagaaggag 180 Query: 285 acatgtgaggctgtcaccattgttgagacaccccctattgttattgttggacttgttgcc 344 || ||||||||||| |||||| |||||||||| |||||||| ||||||||||||| ||| Sbjct: 181 acctgtgaggctgttaccattattgagacacctcctattgtcgttgttggacttgtggcc 240 Query: 345 tatgtgaagactcctcgtggccatcgtactctcaactctgtctgggcacagcatctcagc 404 |||||||||||||| |||||| || | |||||||||||||||||| |||||||| || Sbjct: 241 tatgtgaagactccacgtggcttacgcagtctcaactctgtctgggctcagcatcttagt 300 Query: 405 gaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaagaaggccttcacc 464 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 301 gaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaagaaggctttcacc 360 Query: 465 aagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccagatgcagcttgag 524 |||||||| || |||||||| || ||||| |||||||| |||||||| |||||||||||| Sbjct: 361 aagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaaatgcagcttgag 420 Query: 525 aagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||| ||||||||| Sbjct: 421 aagatgaagaagtatgcttctgttgtcc 448
>gb|AY103608.1| Zea mays PCO139614 mRNA sequence Length = 1714 Score = 436 bits (220), Expect = e-119 Identities = 420/484 (86%), Gaps = 7/484 (1%) Strand = Plus / Plus Query: 69 aggatgtcgcaccgtaagttcgagcacccgagacacgga-tccctcggtttcctccccag 127 |||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 122 aggatgtcgcaccgtaagttcgagcacccgaggcacgggctccctcggcttccttcccag 181 Query: 128 gaagcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaa 187 |||||| | ||| || |||||||| ||||||||| | ||||| || ||||||| |||| Sbjct: 182 gaagcgctcctcccgtcaccgcggcaaggtgaagtcattccctagggatgacc---ccaa 238 Query: 188 gaaa---tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcg 244 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 239 gaagccttgccatctcactgccttccttggctacaaggctggcatgactcacattgtccg 298 Query: 245 tgaggtcgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccat 304 |||||| |||||||| || ||||| || || |||||||| || ||||||||||| ||||| Sbjct: 299 tgaggttgagaagccaggatccaaactccataagaaggaaacttgtgaggctgttaccat 358 Query: 305 tgttgagacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtgg 364 |||| || || ||| |||| |||||||| || || || |||||||||||||||||||| Sbjct: 359 cattgaaacccctcctcttgtcattgttgggctcgtggcatatgtgaagactcctcgtgg 418 Query: 365 ccatcgtactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggtt 424 || || || ||||||||||| ||||| || ||||| |||||||| |||||||||||||| Sbjct: 419 cctccgcacactcaactctgtttgggcccaacatcttagcgaagaagtgaggagaaggtt 478 Query: 425 ctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatga 484 ||||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 479 ctacaagaactggtgcaagagcaagaagaaggctttcacaaagtatgctctcaaatatga 538 Query: 485 cagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctac 544 | ||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||| | Sbjct: 539 aaatgatgctggcaagaaggaaattcagctgcagcttgagaagatgaagaaatatgcttc 598 Query: 545 tgtt 548 |||| Sbjct: 599 tgtt 602
>gb|BT017815.1| Zea mays clone EL01N0507E03.c mRNA sequence Length = 1343 Score = 367 bits (185), Expect = 3e-98 Identities = 314/357 (87%) Strand = Plus / Plus Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89 tgccatctcactgccttccttggctacaaggctggcatgactcacattgtccgtgaggtt 148 Query: 252 gagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgag 311 |||||||| || ||||| || || |||||||| || ||||||||||| ||||| |||| Sbjct: 149 gagaagccaggatccaaactccataagaaggaaacttgtgaggctgttaccatcattgaa 208 Query: 312 acaccccctattgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgt 371 || || ||| |||| |||||||| || || || |||||||||||||||||||||| || Sbjct: 209 acccctcctcttgtcattgttgggctcgtggcatatgtgaagactcctcgtggcctccgc 268 Query: 372 actctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaag 431 ||| |||||||||| ||||| || ||||| |||||||| ||||||||||||||||||||| Sbjct: 269 actttcaactctgtttgggcccaacatcttagcgaagaagtgaggagaaggttctacaag 328 Query: 432 aactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgat 491 |||||||||||||||||||||||||| ||||| |||||||| || || ||||| | |||| Sbjct: 329 aactggtgcaagagcaagaagaaggctttcacaaagtatgctctcaaatatgaaaatgat 388 Query: 492 gctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgtt 548 ||||||||||| ||||| ||| |||||||||||||||||||||| |||||| ||||| Sbjct: 389 gctggcaagaaggaaattcagctgcagcttgagaagatgaagaaatatgcttctgtt 445
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Minus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 |||||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 39001 cacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgtt 38942 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 |||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| Sbjct: 38941 ggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggct 38882 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 38881 cagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaag 38822 Query: 453 aaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccag 512 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 38821 aaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaa 38762 Query: 513 atgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 38761 atgcagcttgagaagatgaagaagtatgcttctgttgtcc 38722 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 40169 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 40110 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 40109 gcgctcctcccgccaccgcggcaagg 40084 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 39364 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 39305 Query: 251 cgagaagcctggttcca 267 ||||||||||||||||| Sbjct: 39304 cgagaagcctggttcca 39288
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Minus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 |||||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 138302 cacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgtt 138243 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 |||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| Sbjct: 138242 ggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggct 138183 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 138182 cagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaag 138123 Query: 453 aaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccag 512 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 138122 aaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaa 138063 Query: 513 atgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 138062 atgcagcttgagaagatgaagaagtatgcttctgttgtcc 138023 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 139470 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 139411 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 139410 gcgctcctcccgccaccgcggcaagg 139385 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 138665 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 138606 Query: 251 cgagaagcctggttcca 267 ||||||||||||||||| Sbjct: 138605 cgagaagcctggttcca 138589
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 |||||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 30199 cacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgtt 30258 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 |||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| Sbjct: 30259 ggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggct 30318 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 30319 cagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaag 30378 Query: 453 aaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccag 512 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 30379 aaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaa 30438 Query: 513 atgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 30439 atgcagcttgagaagatgaagaagtatgcttctgttgtcc 30478 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 29031 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 29090 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 29091 gcgctcctcccgccaccgcggcaagg 29116 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 29836 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 29895 Query: 251 cgagaagcctggttcca 267 ||||||||||||||||| Sbjct: 29896 cgagaagcctggttcca 29912
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 |||||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 3275984 cacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgtt 3276043 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 |||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| Sbjct: 3276044 ggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggct 3276103 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 3276104 cagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaag 3276163 Query: 453 aaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccag 512 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 3276164 aaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaa 3276223 Query: 513 atgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 3276224 atgcagcttgagaagatgaagaagtatgcttctgttgtcc 3276263 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 3274816 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 3274875 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 3274876 gcgctcctcccgccaccgcggcaagg 3274901 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 3275621 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 3275680 Query: 251 cgagaagcctggttcca 267 ||||||||||||||||| Sbjct: 3275681 cgagaagcctggttcca 3275697 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 ccgccgccgcctccacctccacc 46 ||||||||||||||||||||||| Sbjct: 12123651 ccgccgccgcctccacctccacc 12123673 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 25051348 ccgcctcctccacctccacctccac 25051372 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 20167081 ccgcctcctccacctccacctccac 20167105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cgcctccacctccacctccac 51 ||||||||||||||||||||| Sbjct: 14397271 cgcctccacctccacctccac 14397291 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cgccgccgcctccacctccacctcc 49 ||||||||||||||||||| ||||| Sbjct: 6013576 cgccgccgcctccacctccgcctcc 6013552 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 20 ccatccgccgccgcctccacctccacctccac 51 |||||| || || ||||||||||||||||||| Sbjct: 21675527 ccatccacctccacctccacctccacctccac 21675496 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccccatccgccgccgcctcc 37 |||||||||||||||||||| Sbjct: 13721992 ccccatccgccgccgcctcc 13722011
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 341 bits (172), Expect = 1e-90 Identities = 253/280 (90%) Strand = Plus / Plus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 |||||||||||||| ||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 3284697 cacaagaaggagacctgtgaggctgttaccattattgagacacctcctattgtcgttgtt 3284756 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 |||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| Sbjct: 3284757 ggacttgtggcctatgtgaagactccacgtggcttacgcagtctcaactctgtctgggct 3284816 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 3284817 cagcatcttagtgaagaagtaaggagaaggttctacaagaactggtgcaagagcaagaag 3284876 Query: 453 aaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatccag 512 ||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 3284877 aaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatccaa 3284936 Query: 513 atgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 3284937 atgcagcttgagaagatgaagaagtatgcttctgttgtcc 3284976 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 3283529 gatgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaa 3283588 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 3283589 gcgctcctcccgccaccgcggcaagg 3283614 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||||||| |||| | || ||||||||||| ||||| ||||||||||||||||| Sbjct: 3284334 atgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggt 3284393 Query: 251 cgagaagcctggttcca 267 ||||||||||||||||| Sbjct: 3284394 cgagaagcctggttcca 3284410 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 ccgccgccgcctccacctccacc 46 ||||||||||||||||||||||| Sbjct: 12202958 ccgccgccgcctccacctccacc 12202980 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 25362938 ccgcctcctccacctccacctccac 25362962 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 20452211 ccgcctcctccacctccacctccac 20452235 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cgcctccacctccacctccac 51 ||||||||||||||||||||| Sbjct: 14479272 cgcctccacctccacctccac 14479292 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cgccgccgcctccacctccacctcc 49 ||||||||||||||||||| ||||| Sbjct: 6080053 cgccgccgcctccacctccgcctcc 6080029 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 20 ccatccgccgccgcctccacctccacctccac 51 |||||| || || ||||||||||||||||||| Sbjct: 21985726 ccatccacctccacctccacctccacctccac 21985695 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccccatccgccgccgcctcc 37 |||||||||||||||||||| Sbjct: 13803990 ccccatccgccgccgcctcc 13804009
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 276 bits (139), Expect = 7e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 268 agctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgtta 327 |||| ||||||||||| || || |||||||| ||||| | ||||| || || |||| | Sbjct: 3429434 agctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtca 3429493 Query: 328 ttgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtct 387 |||||||||| || |||||||| ||||| |||||||| | ||| ||||||||||||||| Sbjct: 3429494 ttgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtct 3429553 Query: 388 gggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagca 447 |||| ||||| || ||||| || ||| |||||||||||||||||||||||||||| |||| Sbjct: 3429554 gggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagca 3429613 Query: 448 agaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaa 507 |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 3429614 agaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaa 3429673 Query: 508 tccagatgcagcttgagaagatgaagaagta 538 |||||||||| |||||||||||||||||||| Sbjct: 3429674 tccagatgcaacttgagaagatgaagaagta 3429704 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 3429277 tgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtc 3429336 Query: 252 gagaagcctggttcca 267 ||||||||||| |||| Sbjct: 3429337 gagaagcctggctcca 3429352 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 3428551 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 3428610 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 3428611 gcgctcctcccgccaccgcggcaagg 3428636 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 23 tccgccgccgcctccacctccacctccac 51 |||||| |||||||||||||||||||||| Sbjct: 8678420 tccgcctccgcctccacctccacctccac 8678392 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 18 ccccatccgccgccgcctccacctccacctcca 50 |||| ||| |||||||| ||||||||||||||| Sbjct: 24848896 ccccctcctccgccgccgccacctccacctcca 24848928 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cctccacctccacctccacag 53 ||||||||||||||||||||| Sbjct: 24538139 cctccacctccacctccacag 24538119 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 5920699 ccgcctcctccacctccacctccac 5920675 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 cgccgccgcctccacctccacctc 48 ||||||||||||| |||||||||| Sbjct: 19683480 cgccgccgcctccgcctccacctc 19683503 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 agaagatgaagaagtatgct 542 |||||||||||||||||||| Sbjct: 9840255 agaagatgaagaagtatgct 9840236 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 ccgccgccgcctccacctccacctccac 51 ||||| |||||||| ||||||||||||| Sbjct: 8678425 ccgcctccgcctccgcctccacctccac 8678398
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 276 bits (139), Expect = 7e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 268 agctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgtta 327 |||| ||||||||||| || || |||||||| ||||| | ||||| || || |||| | Sbjct: 3429375 agctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtca 3429434 Query: 328 ttgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtct 387 |||||||||| || |||||||| ||||| |||||||| | ||| ||||||||||||||| Sbjct: 3429435 ttgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtct 3429494 Query: 388 gggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagca 447 |||| ||||| || ||||| || ||| |||||||||||||||||||||||||||| |||| Sbjct: 3429495 gggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagca 3429554 Query: 448 agaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaa 507 |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 3429555 agaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaa 3429614 Query: 508 tccagatgcagcttgagaagatgaagaagta 538 |||||||||| |||||||||||||||||||| Sbjct: 3429615 tccagatgcaacttgagaagatgaagaagta 3429645 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 3429218 tgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtc 3429277 Query: 252 gagaagcctggttcca 267 ||||||||||| |||| Sbjct: 3429278 gagaagcctggctcca 3429293 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 3428492 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 3428551 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 3428552 gcgctcctcccgccaccgcggcaagg 3428577 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 23 tccgccgccgcctccacctccacctccac 51 |||||| |||||||||||||||||||||| Sbjct: 8678303 tccgcctccgcctccacctccacctccac 8678275 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 18 ccccatccgccgccgcctccacctccacctcca 50 |||| ||| |||||||| ||||||||||||||| Sbjct: 24777102 ccccctcctccgccgccgccacctccacctcca 24777134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cctccacctccacctccacag 53 ||||||||||||||||||||| Sbjct: 24466345 cctccacctccacctccacag 24466325 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ccgccgcctccacctccacctccac 51 ||||| ||||||||||||||||||| Sbjct: 5920692 ccgcctcctccacctccacctccac 5920668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 cgccgccgcctccacctccacctc 48 ||||||||||||| |||||||||| Sbjct: 19609694 cgccgccgcctccgcctccacctc 19609717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 agaagatgaagaagtatgct 542 |||||||||||||||||||| Sbjct: 9840140 agaagatgaagaagtatgct 9840121 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 ccgccgccgcctccacctccacctccac 51 ||||| |||||||| ||||||||||||| Sbjct: 8678308 ccgcctccgcctccgcctccacctccac 8678281
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 276 bits (139), Expect = 7e-71 Identities = 238/271 (87%) Strand = Plus / Minus Query: 268 agctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgtta 327 |||| ||||||||||| || || |||||||| ||||| | ||||| || || |||| | Sbjct: 102485 agctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtca 102426 Query: 328 ttgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtct 387 |||||||||| || |||||||| ||||| |||||||| | ||| ||||||||||||||| Sbjct: 102425 ttgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtct 102366 Query: 388 gggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagca 447 |||| ||||| || ||||| || ||| |||||||||||||||||||||||||||| |||| Sbjct: 102365 gggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagca 102306 Query: 448 agaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaa 507 |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 102305 agaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaa 102246 Query: 508 tccagatgcagcttgagaagatgaagaagta 538 |||||||||| |||||||||||||||||||| Sbjct: 102245 tccagatgcaacttgagaagatgaagaagta 102215 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 102642 tgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtc 102583 Query: 252 gagaagcctggttcca 267 ||||||||||| |||| Sbjct: 102582 gagaagcctggctcca 102567 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 103368 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 103309 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 103308 gcgctcctcccgccaccgcggcaagg 103283
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 276 bits (139), Expect = 7e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 268 agctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgtta 327 |||| ||||||||||| || || |||||||| ||||| | ||||| || || |||| | Sbjct: 108487 agctccacaagaaggaaacctgcgaggctgttaccatcatcgagacccctccgcttgtca 108546 Query: 328 ttgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtct 387 |||||||||| || |||||||| ||||| |||||||| | ||| ||||||||||||||| Sbjct: 108547 ttgttggactcgtggcctatgtcaagacacctcgtggacttcgctctctcaactctgtct 108606 Query: 388 gggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagca 447 |||| ||||| || ||||| || ||| |||||||||||||||||||||||||||| |||| Sbjct: 108607 gggcccagcaccttagcgaggaggtgcggagaaggttctacaagaactggtgcaaaagca 108666 Query: 448 agaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaa 507 |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 108667 agaagaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaa 108726 Query: 508 tccagatgcagcttgagaagatgaagaagta 538 |||||||||| |||||||||||||||||||| Sbjct: 108727 tccagatgcaacttgagaagatgaagaagta 108757 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 192 tgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtc 251 |||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 108330 tgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtc 108389 Query: 252 gagaagcctggttcca 267 ||||||||||| |||| Sbjct: 108390 gagaagcctggctcca 108405 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 107604 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 107663 Query: 131 gcgttgctcgcgccaccgcggaaagg 156 ||| | ||| ||||||||||| |||| Sbjct: 107664 gcgctcctcccgccaccgcggcaagg 107689
>dbj|D21299.1|RICSS498 Oryza sativa SS498 mRNA for ribosomal protein, partial sequence Length = 308 Score = 236 bits (119), Expect = 6e-59 Identities = 164/179 (91%) Strand = Plus / Plus Query: 374 tctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaa 433 |||||||||||||||||| |||||||| || ||||| || |||||||||||||||||||| Sbjct: 10 tctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaagaa 69 Query: 434 ctggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgc 493 |||||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| Sbjct: 70 ctggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcgatgc 129 Query: 494 tggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgttgtcc 552 |||||||| |||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 130 cggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttcttttgtcc 188
>dbj|D38597.1|RICRPB Oryza sativa mRNA, partial homologous to ribosomal protein coding sequence Length = 447 Score = 234 bits (118), Expect = 2e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 373 ctctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaaga 432 ||||||||||||||||||| ||||| || ||||| || ||| |||||||||||||||||| Sbjct: 6 ctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaaga 65 Query: 433 actggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatg 492 |||||||||| |||||||||||||| ||||| |||||||| || |||||||||||||||| Sbjct: 66 actggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtgatg 125 Query: 493 ctggcaagaaagaaatccagatgcagcttgagaagatgaagaagta 538 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126 ctggcaagaaagaaatccagatgcaacttgagaagatgaagaagta 171
>gb|AY456411.1| Lycopersicon esculentum ribosomal protein L3 (RPL3) mRNA, complete cds Length = 1387 Score = 172 bits (87), Expect = 8e-40 Identities = 323/399 (80%), Gaps = 2/399 (0%) Strand = Plus / Plus Query: 64 ggagaaggatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctcc 123 ||||||||||||| ||| | ||||| |||||||| |||||||| || | || || |||| Sbjct: 27 ggagaaggatgtctcacaggaagtttgagcacccaagacacggttctttgggatttctcc 86 Query: 124 ccaggaagcgttgctcgc-gccaccgcggaaaggtgaaggctttccccagagatgaccaa 182 ||||||||||| ||| | | ||| | |||||||||||||| ||||| | ||||||| | Sbjct: 87 ccaggaagcgt-gctgccagacacaggggaaaggtgaaggcattcccaaaggatgaccca 145 Query: 183 tccaagaaatgccacctcactgccttccttggctacaaggctggcatgactcacattgtg 242 |||| ||| | || ||||||||| | || ||||||||||| |||||||||||||| Sbjct: 146 agcaagccttgcaagctaactgccttcttgggttacaaggctggaatgactcacattgtc 205 Query: 243 cgtgaggtcgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcacc 302 | || || ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 206 agagaagttgagaaacctggatcaaaactccacaagaaagagacatgtgaagctgttacc 265 Query: 303 attgttgagacaccccctattgttattgttggacttgttgcctatgtgaagactcctcgt 362 |||||||| ||||| ||||| || |||||||| |||||| ||||||||||| |||||| Sbjct: 266 attgttgaaacacctcctatggtgattgttggtgttgttgggtatgtgaagacccctcgt 325 Query: 363 ggccatcgtactctcaactctgtctgggcacagcatctcagcgaagatgtgaggagaagg 422 || | |||| || ||| | |||||||| || |||||||| ||||| | | ||| ||| Sbjct: 326 ggtcttcgttgcctgaacacagtctgggctcaacatctcagtgaagacattaagaggagg 385 Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttc 461 |||||||||||||||||||| |||||||||||||||| Sbjct: 386 ttctacaagaactggtgcaaatccaagaagaaggccttc 424
>gb|AY395738.1| Nicotiana tabacum ribosomal protein L3A (RPL3A) mRNA, complete cds Length = 1416 Score = 161 bits (81), Expect = 3e-36 Identities = 216/261 (82%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcct 260 ||||||||| | |||||||| |||||||||||||||||||| | || || || || ||| Sbjct: 183 actgccttcttgggctacaaagctggcatgactcacattgtcagagatgttgaaaaacct 242 Query: 261 ggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccct 320 || || || || |||||||| ||||||||||| ||||||||||| |||| ||||| || Sbjct: 243 ggatcaaaactccacaagaaagagacatgtgaagctgtcaccatcattgaaacacctcca 302 Query: 321 attgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaac 380 || || |||||||| |||||| ||||||||||| |||||||| | |||| || ||| Sbjct: 303 atggtgattgttggtgttgttgggtatgtgaagacacctcgtggtcttcgttgcctgaac 362 Query: 381 tctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgc 440 |||||||||| || |||||||| ||||| | | ||| ||||||||||||||||||||| Sbjct: 363 actgtctgggctcaacatctcagtgaagagcttaagaggaggttctacaagaactggtgc 422 Query: 441 aagagcaagaagaaggccttc 461 ||| |||||||||||||||| Sbjct: 423 aagtccaagaagaaggccttc 443
>dbj|D10403.1|RICT82 Oryza sativa mRNA for ribosomal protein L3 (T82 gene), partial sequence Length = 258 Score = 159 bits (80), Expect = 1e-35 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||||||| | ||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 20 gatgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaa 79 Query: 131 gcgttgctcgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaagaa 190 | | | ||| |||||| ||| ||||||||| | ||||||| |||||| ||| ||| Sbjct: 80 g-gctcctcccgccac--cggcaaggtgaagtccttccccaaggatgacgtatcaaagcc 136 Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 |||||||| ||| |||| |||||||||||||||| ||||| |||||||||||||| || Sbjct: 137 ctgccaccttacttccttngttggctacaaggctggaatgacacacattgtgcgtga-gt 195 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccat 304 |||||||||||| |||||||| ||||||||||| || || |||||||| ||||| Sbjct: 196 cgagaagcctggctccaagctccacaagaaggaaacctgcgaggctgttaccat 249
>gb|DQ241849.1| Solanum tuberosum clone 187E04 ribosomal protein L3-like mRNA, complete cds Length = 1434 Score = 145 bits (73), Expect = 2e-31 Identities = 214/261 (81%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcct 260 ||||||||| | || ||||||||||| |||||||||||||| | || || || |||||| Sbjct: 181 actgccttcttggggtacaaggctggaatgactcacattgtcagagaagttgaaaagcct 240 Query: 261 ggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccct 320 || || || || |||||||| ||||||||||| ||||| ||||||||||| ||||| || Sbjct: 241 ggatcaaaactccacaagaaagagacatgtgaagctgttaccattgttgaaacacctcca 300 Query: 321 attgttattgttggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaac 380 || || || ||||| |||| | ||||||||||| |||||||| | |||| || ||| Sbjct: 301 atggtgatcgttggtgttgtcgggtatgtgaagacccctcgtggtcttcgttgcctgaac 360 Query: 381 tctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgc 440 | |||||||| || |||||||| |||||| | | ||| ||||||||||||||||||||| Sbjct: 361 acagtctgggctcaacatctcagtgaagatattaagaggaggttctacaagaactggtgc 420 Query: 441 aagagcaagaagaaggccttc 461 || |||||||||||||||| Sbjct: 421 aaatccaagaagaaggccttc 441
>ref|NM_001036069.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.3 mRNA, complete cds Length = 1447 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 117 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 176 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 177 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 236 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 237 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 296 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 297 gttggagttgttgcctatgtgaagactcct 326 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 349 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 408 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 409 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 468 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 469 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 514
>ref|NM_202237.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.2 mRNA, complete cds Length = 1449 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 119 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 178 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 179 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 238 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 239 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 298 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 299 gttggagttgttgcctatgtgaagactcct 328 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 351 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 410 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 411 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 470 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 471 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 516
>ref|NM_103469.2| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.1 mRNA, complete cds Length = 1483 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 153 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 212 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 213 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 272 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 273 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 332 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 333 gttggagttgttgcctatgtgaagactcct 362 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 385 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 444 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 445 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 504 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 505 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 550
>gb|BT000756.1| Arabidopsis thaliana clone RAFL09-59-D03 (R18985) putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1452 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 140 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 199 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 200 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 259 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 260 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 319 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 320 gttggagttgttgcctatgtgaagactcct 349 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| |||| || || || |||||||||||||||||||||||| | Sbjct: 372 ctgtctgggcacagcatttcagtgaggaggtcaggagaaggttctacaagaactgggcta 431 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 432 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 491 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 492 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 537
>gb|AF361101.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1220 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 79 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 138 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 139 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 198 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 199 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 258 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 259 gttggagttgttgcctatgtgaagactcct 288 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 311 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 370 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 371 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 430 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 431 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 476
>gb|AF327421.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1456 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 142 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 201 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 202 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 261 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 262 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 321 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 322 gttggagttgttgcctatgtgaagactcct 351 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 374 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 433 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 434 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 493 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 494 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 539
>gb|AF361809.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1380 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 138 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 197 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 198 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 257 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 258 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 317 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 318 gttggagttgttgcctatgtgaagactcct 347 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 370 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 429 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 430 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 489 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 490 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 535
>gb|AY057487.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1361 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 136 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 195 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 196 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 255 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 256 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 315 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 316 gttggagttgttgcctatgtgaagactcct 345 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 368 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 427 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 428 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 487 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 488 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 533
>gb|AY052743.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1170 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 79 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 138 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 139 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 198 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 199 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 258 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 259 gttggagttgttgcctatgtgaagactcct 288 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 311 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 370 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 371 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 430 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 431 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 476
>gb|AY039544.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1440 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 142 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 201 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 202 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 261 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 262 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 321 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 322 gttggagttgttgcctatgtgaagactcct 351 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 374 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 433 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 434 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 493 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 494 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 539
>gb|M32654.1|ATHRPCA Arabidopsis thaliana cytoplasmic ribosomal protein mRNA, complete cds Length = 1462 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||| ||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 112 ggaaaggtgaaggcgttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 171 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| |||||||||||||| | || || ||||| ||||| |||||| Sbjct: 172 atgggttacaaagctggtatgactcacattgtcagagaagtggagaaacctggatccaag 231 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| ||||| |||||||||| |||| || || Sbjct: 232 cttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtggtt 291 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 292 gttggagttgttgcctatgtgaagactcct 321 Score = 67.9 bits (34), Expect = 3e-08 Identities = 133/166 (80%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 344 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 403 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 404 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 463 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||| |||||||||| |||||||| Sbjct: 464 agggtattcaggctcagcttgagaaagtgaagaagtacgctactgt 509
>gb|AY089000.1| Arabidopsis thaliana clone 14534 mRNA, complete sequence Length = 1389 Score = 131 bits (66), Expect = 3e-27 Identities = 174/210 (82%) Strand = Plus / Plus Query: 150 ggaaaggtgaaggctttccccagagatgaccaatccaagaaatgccacctcactgccttc 209 |||||||||||||||||||| | ||||||||| ||||| ||| | |||| || ||| Sbjct: 139 ggaaaggtgaaggctttccctaaggatgaccaaaccaagccttgcaagttcacagctttc 198 Query: 210 cttggctacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaag 269 | || ||||| ||||| ||||||||||| || | || || ||||| ||||| |||||| Sbjct: 199 atgggttacaaagctggtatgactcacatcgtcagagaagtggagaaacctggatccaag 258 Query: 270 ctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttatt 329 || |||||||||||||||||||||||||| || || |||||||||| |||| || || Sbjct: 259 cttcacaagaaggagacatgtgaggctgttactatcattgagacacctgctatggtggtt 318 Query: 330 gttggacttgttgcctatgtgaagactcct 359 |||||| ||||||||||||||||||||||| Sbjct: 319 gttggagttgttgcctatgtgaagactcct 348 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 371 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 430 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 431 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 490 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 491 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 536
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 268 agctgcacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgtta 327 |||| |||||||||||||||||||||||||| ||||| |||||||||| |||| || Sbjct: 39472 agcttcacaagaaggagacatgtgaggctgttaccatcattgagacacctgctatggtgg 39531 Query: 328 ttgttggacttgttgcctatgtgaagactcct 359 |||||||| ||||||||||||||||||||||| Sbjct: 39532 ttgttggagttgttgcctatgtgaagactcct 39563 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 382 ctgtctgggcacagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgca 441 ||||||||||||||||| | || || || || |||||||||||||||||||||||| | Sbjct: 39586 ctgtctgggcacagcatttgagtgaggaggtcaggagaaggttctacaagaactgggcta 39645 Query: 442 agagcaagaagaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaaga 501 || ||||||||||| ||||| ||| || | ||||||||||||| | |||||||| Sbjct: 39646 agtctaagaagaaggctttcactgggtacgctaagcagtatgacagtgaggatggcaaga 39705 Query: 502 aagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 547 | | || ||| ||||||||||||||||||||||| |||||||| Sbjct: 39706 agggtattcaggctcagcttgagaagatgaagaagtacgctactgt 39751
>ref|XM_864664.1| PREDICTED: Bos taurus similar to ribosomal protein L3 (LOC613519), mRNA Length = 1314 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 173 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcgat 232 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 233 aggccagggtccaaggtgaacaagaagga 261 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaa 466 ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 401 ttctacaagaactggcataagtccaagaagaaggccttcaccaa 444
>emb|Z29555.2|BTRIPRL3 B.taurus mRNA for ribosomal protein L3 Length = 1294 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 141 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcgat 200 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 201 aggccagggtccaaggtgaacaagaagga 229 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaa 466 ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 369 ttctacaagaactggcataagtccaagaagaaggccttcaccaa 412
>gb|BC102253.1| Bos taurus ribosomal protein L3, mRNA (cDNA clone MGC:127077 IMAGE:7942978), complete cds Length = 1305 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 152 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcgat 211 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 212 aggccagggtccaaggtgaacaagaagga 240 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaa 466 ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 380 ttctacaagaactggcataagtccaagaagaaggccttcaccaa 423
>ref|NM_174715.1| Bos taurus ribosomal protein L3 (Rpl3), mRNA Length = 1294 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 141 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcgat 200 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 201 aggccagggtccaaggtgaacaagaagga 229 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaa 466 ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 369 ttctacaagaactggcataagtccaagaagaaggccttcaccaa 412
>gb|BT021012.1| Bos taurus ribosomal protein L3 (RPL3), mRNA, complete cds Length = 1276 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 138 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcgat 197 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 198 aggccagggtccaaggtgaacaagaagga 226 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaa 466 ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 366 ttctacaagaactggcataagtccaagaagaaggccttcaccaa 409
>dbj|AK130450.1| Homo sapiens cDNA FLJ26940 fis, clone RCT07237, highly similar to 60S ribosomal protein L3 Length = 2230 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 1086 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 1145 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 ||||| || |||||| || ||||||||||| Sbjct: 1146 caagccgggatccaaggtgaacaagaaggag 1176
>ref|XM_868958.1| PREDICTED: Bos taurus similar to ribosomal protein L3 (LOC616840), mRNA Length = 1294 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcgag 254 |||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 144 cacctcactgcctttcttggctacaaggctggcatgactcacattgtgagggaggttgat 203 Query: 255 aagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || | |||||||| Sbjct: 204 aggccagggtccaaggtgaataagaagga 232 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 396 aagaagaaggccttcaccaa 415
>dbj|AB243054.1| Oncorhynchus mykiss mRNA for sex hormone-binding globulin, complete cds Length = 3485 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1167 actgccttccttggctacaaggctggcatgactcacatcgtgcgtgaagtcga 1115 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 ||||||| |||||||| |||| |||||||||||||||||| ||||| Sbjct: 945 ttctacaggaactggtacaagtccaagaagaaggccttcacaaagta 899
>emb|AJ248327.1|MSA248327 Medicago sativa subsp. X varia mRNA for L3 Ribosomal protein Length = 1201 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 420 aggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaag 479 |||||||||||||||||||||||| |||||||||||| |||| |||||| | | || Sbjct: 370 aggttctacaagaactggtgcaagtccaagaagaaggctttcagcaagtactcaaagcag 429 Query: 480 tatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtat 539 ||||| ||||||| || |||||| | ||||||| ||||||||||| ||||||||||| Sbjct: 430 tatgaaagtgatgaggggaagaaaaacatccagacccagcttgagaaactgaagaagtat 489 Query: 540 gctactgtt 548 || |||||| Sbjct: 490 gcaactgtt 498 Score = 79.8 bits (40), Expect = 9e-12 Identities = 180/224 (80%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 71 gatgtcgcaccgtaagttcgagcacccgagacacggatccctcggtttcctccccaggaa 130 |||||| ||| | |||||||||||||| |||||||| || | || || ||||| || || Sbjct: 21 gatgtctcacaggaagttcgagcacccaagacacggttctttgggatttctcccaagaaa 80 Query: 131 gcgttgct-cgcgccaccgcggaaaggtgaaggctttccccagagatgaccaatccaaga 189 ||| |||| | || ||| | ||||| |||||||||||||||| ||||||| | ||||| Sbjct: 81 gcg-tgctgctcgtcacagaggaaaagtgaaggctttccccaaggatgacccaaccaagc 139 Query: 190 aatgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgagg 249 | | | || ||||||||| | || ||||||||||| ||||| |||||||| | || | Sbjct: 140 cacccaagctaactgccttcttgggttacaaggctggtatgacccacattgtcagagaag 199 Query: 250 tcgagaagcctggttccaagctgcacaagaaggagacatgtgag 293 |||||||||| || |||||||| ||||| |||||||| |||||| Sbjct: 200 tcgagaagccaggatccaagcttcacaaaaaggagacttgtgag 243
>gb|BC088373.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:111436 IMAGE:6195715), complete cds Length = 1305 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 146 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 205 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 206 caggccgggatccaaggtgaacaagaaggag 236
>gb|BC107711.1| Homo sapiens ribosomal protein L3, transcript variant 1, mRNA (cDNA clone MGC:104284 IMAGE:6699816), complete cds Length = 1325 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 153 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 212 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 213 caggccgggatccaaggtgaacaagaaggag 243
>ref|XM_525601.1| PREDICTED: Pan troglodytes similar to ribosomal protein L3; 60S ribosomal protein L3; HIV-1 TAR RNA-binding protein B (LOC470216), mRNA Length = 2523 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 162 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 221 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 222 caggccaggatccaaggtgaacaagaaggag 252
>gb|BC012786.2| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:16463 IMAGE:3951917), complete cds Length = 1323 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 136 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 195 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 196 caggccgggatccaaggtgaacaagaaggag 226
>gb|BC063662.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:70878 IMAGE:3852576), complete cds Length = 1299 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 136 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 195 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 196 caggccgggatccaaggtgaacaagaaggag 226
>gb|BC015767.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:23196 IMAGE:4861546), complete cds Length = 1295 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 132 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 191 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 192 caggccgggatccaaggtgaacaagaaggag 222
>gb|BC013674.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:17324 IMAGE:4152521), complete cds Length = 1317 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 132 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 191 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 192 caggccgggatccaaggtgaacaagaaggag 222
>gb|BC008492.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:14821 IMAGE:4251511), complete cds Length = 1322 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 149 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 208 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 209 caggccgggatccaaggtgaacaagaaggag 239
>gb|BC008003.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:15830 IMAGE:3507481), complete cds Length = 1291 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 128 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 187 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 188 caggccgggatccaaggtgaacaagaaggag 218
>gb|BC033296.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone IMAGE:4510463), partial cds Length = 1299 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 129 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 188 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 189 caggccgggatccaaggtgaacaagaaggag 219
>ref|XM_750424.1| Aspergillus fumigatus Af293 large subunit ribosomal protein L3 (Afu2g11850) partial mRNA Length = 1179 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 352 ttctacaagaactggtacaagagcaagaagaaggccttcaccaagta 398
>gb|BC012146.1| Homo sapiens ribosomal protein L3, transcript variant 1, mRNA (cDNA clone MGC:20359 IMAGE:4549682), complete cds Length = 1298 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 136 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 195 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 196 caggccgggatccaaggtgaacaagaaggag 226
>gb|AF464911.1| Aspergillus fumigatus large subunit ribosomal protein L3 mRNA, complete cds Length = 1253 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 352 ttctacaagaactggtacaagagcaagaagaaggccttcaccaagta 398
>gb|BC017593.1| Homo sapiens cDNA clone IMAGE:2988782, **** WARNING: chimeric clone **** Length = 3547 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 2385 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 2444 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 2445 caggccgggatccaaggtgaacaagaaggag 2475
>gb|BC041578.1| Homo sapiens zinc finger protein 114, mRNA (cDNA clone IMAGE:4640152), **** WARNING: chimeric clone **** Length = 3538 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 2376 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 2435 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 2436 caggccgggatccaaggtgaacaagaaggag 2466
>emb|X73460.1|HSRPL3A H.sapiens mRNA for ribosomal protein L3 Length = 1272 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 129 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 188 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 189 caggccgggatccaaggtgaacaagaaggag 219
>gb|BC036582.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:42068 IMAGE:4796724), complete cds Length = 2127 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 788 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 847 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 848 caggccgggatccaaggtgaacaagaaggag 878
>emb|AJ238851.1|BTA238851 Bos taurus rpl3 gene for ribosomal protein L3, U43 snoRNA, U82 snoRNA, U83a snoRNA and U83b snoRNA genes Length = 6259 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 1116 cacctcactgcctttcttggctacaaggctggcatgacccacattgtgagggaggtcga 1174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 caagaagaaggccttcaccaa 466 ||||||||||||||||||||| Sbjct: 2660 caagaagaaggccttcaccaa 2680
>emb|CR926481.1| Pongo pygmaeus mRNA; cDNA DKFZp468G0827 (from clone DKFZp468G0827) Length = 1932 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 151 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgagaagtcga 210 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 211 caggccaggatccaaggtgaacaagaaggag 241
>gb|BC014017.2| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:20304 IMAGE:4128023), complete cds Length = 1311 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 131 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 190 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 191 caggccgggatccaaggtgaacaagaaggag 221
>gb|BC006483.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone IMAGE:2905497), complete cds Length = 1304 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 136 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 195 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 196 caggccgggatccaaggtgaacaagaaggag 226
>emb|CR615684.1| full-length cDNA clone CS0DG004YH06 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1230 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 100 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 159 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 160 caggccgggatccaaggtgaacaagaaggag 190
>emb|CR626505.1| full-length cDNA clone CS0DJ010YA12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1251 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR626451.1| full-length cDNA clone CS0DA008YH04 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR626261.1| full-length cDNA clone CS0DF015YH20 of Fetal brain of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR625577.1| full-length cDNA clone CS0DI063YL04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1234 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR625496.1| full-length cDNA clone CS0DI084YC13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR625393.1| full-length cDNA clone CS0DI003YJ22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1213 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR624992.1| full-length cDNA clone CL0BB016ZB06 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR623791.1| full-length cDNA clone CS0DM002YH24 of Fetal liver of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR623564.1| full-length cDNA clone CS0DI019YJ17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1353 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR622788.1| full-length cDNA clone CS0DJ013YE08 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR621566.1| full-length cDNA clone CL0BB003ZH08 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR621265.1| full-length cDNA clone CS0DA008YD14 of Neuroblastoma of Homo sapiens (human) Length = 1227 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 83 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 142 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 143 caggccgggatccaaggtgaacaagaaggag 173
>emb|CR621177.1| full-length cDNA clone CS0DI055YJ14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR620145.1| full-length cDNA clone CS0DI057YK20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1236 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR619471.1| full-length cDNA clone CS0DH005YK18 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1264 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR619779.1| full-length cDNA clone CS0DF002YN14 of Fetal brain of Homo sapiens (human) Length = 1044 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR619715.1| full-length cDNA clone CS0DH003YK05 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1269 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR619632.1| full-length cDNA clone CS0DF020YI04 of Fetal brain of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR617467.1| full-length cDNA clone CL0BB009ZB12 of Neuroblastoma of Homo sapiens (human) Length = 1264 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR617147.1| full-length cDNA clone CS0DI072YC22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1228 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR616770.1| full-length cDNA clone CS0DA001YA11 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR616722.1| full-length cDNA clone CS0DI084YN09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR615390.1| full-length cDNA clone CL0BB025ZG06 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR613925.1| full-length cDNA clone CL0BB014ZD01 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR609557.1| full-length cDNA clone CS0DE007YI06 of Placenta of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR612896.1| full-length cDNA clone CS0DA004YC12 of Neuroblastoma of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR612782.1| full-length cDNA clone CS0DA007YN20 of Neuroblastoma of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR608886.1| full-length cDNA clone CS0DH007YL14 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>dbj|AK092695.1| Homo sapiens cDNA FLJ35376 fis, clone SKMUS2004044, highly similar to 60S RIBOSOMAL PROTEIN L3 Length = 1160 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 149 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 208 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 209 caggccgggatccaaggtgaacaagaaggag 239
>emb|CR608723.1| full-length cDNA clone CS0DN004YH20 of Adult brain of Homo sapiens (human) Length = 1226 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR607725.1| full-length cDNA clone CS0DI070YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR607164.1| full-length cDNA clone CS0DK005YF16 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1267 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR605080.1| full-length cDNA clone CS0DI031YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1233 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR605015.1| full-length cDNA clone CS0DF024YK22 of Fetal brain of Homo sapiens (human) Length = 1216 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR605531.1| full-length cDNA clone CL0BB009ZC01 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR604030.1| full-length cDNA clone CS0DE014YE11 of Placenta of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR602004.1| full-length cDNA clone CS0DH005YI17 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR601663.1| full-length cDNA clone CS0DF008YN16 of Fetal brain of Homo sapiens (human) Length = 1243 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR601581.1| full-length cDNA clone CS0DI053YP13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1212 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR601189.1| full-length cDNA clone CS0DE009YE21 of Placenta of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR599095.1| full-length cDNA clone CS0DH003YB10 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1269 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR597745.1| full-length cDNA clone CS0DI076YC23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1236 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR597737.1| full-length cDNA clone CS0DI083YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1229 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR597498.1| full-length cDNA clone CS0DN005YH11 of Adult brain of Homo sapiens (human) Length = 1253 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR597485.1| full-length cDNA clone CS0DI027YH23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR597097.1| full-length cDNA clone CS0DK006YJ04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR596667.1| full-length cDNA clone CS0DM001YO11 of Fetal liver of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR596389.1| full-length cDNA clone CL0BB011ZE07 of Neuroblastoma of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR596329.1| full-length cDNA clone CS0DG007YI12 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR595969.1| full-length cDNA clone CL0BB005ZB09 of Neuroblastoma of Homo sapiens (human) Length = 1289 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 142 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 201 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 202 caggccgggatccaaggtgaacaagaaggag 232
>emb|CR595509.1| full-length cDNA clone CS0DM003YE08 of Fetal liver of Homo sapiens (human) Length = 1264 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR595116.1| full-length cDNA clone CS0DA004YF11 of Neuroblastoma of Homo sapiens (human) Length = 1239 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR595102.1| full-length cDNA clone CS0DI030YI05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1237 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR592120.1| full-length cDNA clone XCL0BA001ZF09 of Placenta of Homo sapiens (human) Length = 1266 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR590820.1| full-length cDNA clone CL0BA003ZB06 of Placenta of Homo sapiens (human) Length = 1268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>emb|CR590654.1| full-length cDNA clone CS0DA007YC23 of Neuroblastoma of Homo sapiens (human) Length = 1257 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccgggatccaaggtgaacaagaaggag 211
>dbj|AB226292.1| Aspergillus oryzae cDNA, contig sequence: AoEST3153 Length = 1402 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 394 ttctacaagaactggtacaagagcaagaagaaggccttcaccaagta 440
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1289522 ttctacaagaactggtacaagagcaagaagaaggccttcaccaagta 1289476
>gb|BC022790.1| Homo sapiens, clone IMAGE:3538792, mRNA, partial cds Length = 1200 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 37 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 96 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 97 caggccgggatccaaggtgaacaagaaggag 127
>gb|AY892946.1| Synthetic construct Homo sapiens clone FLH141712.01L ribosomal protein L3 (RPL3) mRNA, partial cds Length = 1212 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 123 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 182 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 183 caggccgggatccaaggtgaacaagaaggag 213
>gb|BC002408.2| Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:8637 IMAGE:2961541), complete cds Length = 1289 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 126 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 185 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 186 caggccgggatccaaggtgaacaagaaggag 216
>gb|BC015032.1| Homo sapiens ribosomal protein L3, mRNA (cDNA clone IMAGE:3912046), complete cds Length = 1291 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 132 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 191 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 192 caggccgggatccaaggtgaacaagaaggag 222
>emb|CR456566.1| Homo sapiens RPL3 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.RPL3) Length = 1243 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 135 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 194 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 195 caggccgggatccaaggtgaacaagaaggag 225
>gb|BC013861.1| Homo sapiens ribosomal protein L3, transcript variant 1, mRNA (cDNA clone IMAGE:3917924) Length = 1291 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 132 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 191 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 192 caggccgggatccaaggtgaacaagaaggag 222
>gb|BC071666.1| Homo sapiens cDNA clone IMAGE:5529152, containing frame-shift errors Length = 1309 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 147 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 206 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 207 caggccgggatccaaggtgaacaagaaggag 237
>gb|L22453.1|HUMTAPR Homo sapiens HIV-1 TAR RNA binding protein (TARBP-b) mRNA, complete cds Length = 834 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 126 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 185 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 186 caggccgggatccaaggtgaacaagaaggag 216
>ref|NM_000967.3| Homo sapiens ribosomal protein L3 (RPL3), transcript variant 1, mRNA Length = 1348 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 191 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 250 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 251 caggccgggatccaaggtgaacaagaaggag 281
>ref|NM_001033853.1| Homo sapiens ribosomal protein L3 (RPL3), transcript variant 2, mRNA Length = 1201 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 191 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 250 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 251 caggccgggatccaaggtgaacaagaaggag 281
>gb|M90054.1|HUMRRL3A Human ribosomal protein L3 mRNA, 3' end Length = 1256 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 109 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 168 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 169 caggccgggatccaaggtgaacaagaaggag 199
>dbj|AB062291.1| Homo sapiens OK/SW-cl.32 mRNA for ribosomal protein L3, complete cds Length = 1281 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 128 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 187 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 188 caggccgggatccaaggtgaacaagaaggag 218
>emb|Z98849.1|SPAC17A5 S.pombe chromosome I cosmid c17A5 Length = 42854 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 7540 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 7589 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 aaggctggcatgactcacattgtgcgtga 247 |||||||| |||||||||||||| ||||| Sbjct: 7336 aaggctggtatgactcacattgttcgtga 7364
>emb|X57734.1|SPRPGL3 S.pombe rpgL3-2 gene for ribosomal protein L3 Length = 1728 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 652 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 701 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 147 cgcggaaaggtgaaggctttcccca 171 ||||||||||||||||||||||||| Sbjct: 376 cgcggaaaggtgaaggctttcccca 400
>emb|AL590902.2|SPAPB8E5 S.pombe chromosome I cosmid pB8E5 Length = 19788 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 11601 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 11552 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 147 cgcggaaaggtgaaggctttcccca 171 ||||||||||||||||||||||||| Sbjct: 11877 cgcggaaaggtgaaggctttcccca 11853
>ref|NM_001020208.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAPB8E5.06c), partial mRNA Length = 1167 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 352 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 401 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 147 cgcggaaaggtgaaggctttcccca 171 ||||||||||||||||||||||||| Sbjct: 76 cgcggaaaggtgaaggctttcccca 100
>ref|NM_001018904.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC17A5.03), partial mRNA Length = 1167 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 352 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 401 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 aaggctggcatgactcacattgtgcgtga 247 |||||||| |||||||||||||| ||||| Sbjct: 148 aaggctggtatgactcacattgttcgtga 176
>gb|U00798.1|SPU00798 Schizosaccharomyces pombe ribosomal protein L3 (rpg13-1) gene, complete cds Length = 2012 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgc 472 |||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 500 ttctacaagaactggttcaagagcaagaagaaggctttcaccaagtatgc 549 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 aaggctggcatgactcacattgtgcgtga 247 |||||||| |||||||||||||| ||||| Sbjct: 296 aaggctggtatgactcacattgttcgtga 324
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence Length = 125121 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 420 aggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaag 479 |||||||||||||||||||||||| |||||||||||| |||| |||||| | | || Sbjct: 7646 aggttctacaagaactggtgcaagtccaagaagaaggctttcagcaagtactcaaagcag 7705 Query: 480 tatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtat 539 ||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||||| Sbjct: 7706 tatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagtat 7765 Query: 540 gctactgtt 548 || |||||| Sbjct: 7766 gcaactgtt 7774 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgt 241 ||||||||| | || ||||||||||| ||||| |||||||| Sbjct: 6860 actgccttcttgggttacaaggctggtatgacccacattgt 6900
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence Length = 103966 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 420 aggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaag 479 |||||||||||||||||||||||| |||||||||||| |||| |||||| | | || Sbjct: 1713 aggttctacaagaactggtgcaagtccaagaagaaggctttcagcaagtactcaaagcag 1654 Query: 480 tatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtat 539 ||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||||| Sbjct: 1653 tatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagtat 1594 Query: 540 gctactgtt 548 || |||||| Sbjct: 1593 gcaactgtt 1585 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 201 actgccttccttggctacaaggctggcatgactcacattgt 241 ||||||||| | || ||||||||||| ||||| |||||||| Sbjct: 2499 actgccttcttgggttacaaggctggtatgacccacattgt 2459
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence Length = 113200 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 420 aggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagtatgcgctgaag 479 |||||||||||||||||||||||| |||||||||||| |||| |||||| | | || Sbjct: 97926 aggttctacaagaactggtgcaagtccaagaagaaggctttcagcaagtactcaaagcag 97985 Query: 480 tatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtat 539 ||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||||| Sbjct: 97986 tatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagtat 98045 Query: 540 gctactgtt 548 || |||||| Sbjct: 98046 gcaactgtt 98054 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgt 241 ||||||||| | || ||||||||||| ||||| |||||||| Sbjct: 97140 actgccttcttgggttacaaggctggtatgacccacattgt 97180
>ref|XM_966782.1| PREDICTED: Tribolium castaneum similar to CG4863-PA, isoform A (LOC660560), mRNA Length = 1365 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 445 ttctacaagaactggtacaagagcaagaagaaggccttcaccaag 489
>dbj|AK109100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-B01, full insert sequence Length = 1470 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 191 atgccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 ||||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||||| || Sbjct: 167 atgccacttgactggcttcattggctacaaggccggcatgacccacatcctgcgtgatgt 226 Query: 251 cgagaagcctggttccaagctgcacaagaaggagacatgtgaggctgtcaccattgt 307 || |||||||| ||||||||||||||||||||| || ||| | || |||||||| Sbjct: 227 ggacaagcctggcagcaagctgcacaagaaggagacttgcgagccagtgaccattgt 283 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 399 ttctacaagaactggtacaaggccaagaagaaggccttcaccaagta 445
>ref|NM_104840.3| Arabidopsis thaliana ARP2/RPL3B; structural constituent of ribosome AT1G61580 (ARP2/RPL3B) mRNA, complete cds Length = 1343 Score = 79.8 bits (40), Expect = 9e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 216 tacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaagctgcac 275 ||||| ||||| ||||||||||||||| | || || || || ||||| || || || ||| Sbjct: 183 tacaaagctgggatgactcacattgtgagagatgttgaaaaacctggatcaaaactacac 242 Query: 276 aagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgttgga 335 |||||||| |||||||| ||||| || || |||||||||| || || || ||||||| Sbjct: 243 aagaaggaaacatgtgaagctgtgacgatcattgagacacctccaatggtggttgttggt 302 Query: 336 cttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggcacag 395 | |||| ||||| ||||| |||||||| | || |||| | |||| ||||| ||| Sbjct: 303 gtggttggttatgtaaagacacctcgtggtctgcggtctctatgcactgtgtgggctcag 362 Query: 396 catctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaagaag 455 ||||| |||||||| |||| || |||||||||||||||||| |||| ||||||||| Sbjct: 363 catctgagcgaagaattgagaaggaggttctacaagaactgggccaagtcaaagaagaag 422 Query: 456 gccttcac 463 || ||||| Sbjct: 423 gctttcac 430
>ref|NM_001001590.1| Danio rerio ribosomal protein L3 (rpl3), mRNA Length = 1371 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 205 cacctgactgctttccttggctacaaggctggcatgacccacatagtccgtgaggtcga 263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 433 ttctacaagaactggtataagtccaagaagaaggcctttaccaagta 479
>gb|AY561514.1| Danio rerio ribosomal protein L3 (rpl3) mRNA, complete cds Length = 1371 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 205 cacctgactgctttccttggctacaaggctggcatgacccacatagtccgtgaggtcga 263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 433 ttctacaagaactggtataagtccaagaagaaggcctttaccaagta 479
>ref|XM_658714.1| Aspergillus nidulans FGSC A4 60S ribosomal protein L3 (AN6202.2), mRNA Length = 1344 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 517 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 563
>gb|DQ249182.1| Homo sapiens isolate 541CLS41 haplotype HLA-B5001/HLA-Cw0602 genomic sequence Length = 346809 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 97152 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 97093 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 97092 caggccaggatccaaggtgaacaagaaggag 97062
>gb|DQ249181.1| Homo sapiens isolate 541CLS37 haplotype HLA-B070201/HLA-Cw07020103 genomic sequence Length = 341361 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 95851 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 95792 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 95791 caggccaggatccaaggtgaacaagaaggag 95761
>gb|DQ249180.1| Homo sapiens isolate 495CLS44 haplotype HLA-B570101/HLA-Cw0602 genomic sequence Length = 265420 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 100311 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 100252 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 100251 caggccaggatccaaggtgaacaagaaggag 100221
>gb|DQ249179.1| Homo sapiens isolate 495CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic sequence Length = 338517 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 96335 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 96276 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 96275 caggccaggatccaaggtgaacaagaaggag 96245
>gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B15010101/HLA-Cw030401 genomic sequence Length = 351341 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 111941 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 111882 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 111881 caggccaggatccaaggtgaacaagaaggag 111851
>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 363675 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 111866 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 111807 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 111806 caggccaggatccaaggtgaacaagaaggag 111776
>gb|DQ249175.1| Homo sapiens isolate 144CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic sequence Length = 328871 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 97318 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 97259 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 97258 caggccaggatccaaggtgaacaagaaggag 97228
>gb|DQ249174.1| Homo sapiens isolate 144CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 338544 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 108052 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 107993 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 107992 caggccaggatccaaggtgaacaagaaggag 107962
>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 336776 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 90970 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 90911 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 90910 caggccaggatccaaggtgaacaagaaggag 90880
>gb|DQ249172.1| Homo sapiens isolate 135CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 342745 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 88661 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 88602 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 88601 caggccaggatccaaggtgaacaagaaggag 88571
>ref|NG_002397.2| Homo sapiens major histocompatibility complex, class I, BC (HLA-BC) on chromosome 6 Length = 89417 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 12188 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 12247 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 12248 caggccaggatccaaggtgaacaagaaggag 12278
>emb|BX248310.3| Human DNA sequence from clone DASS-311G1 on chromosome 6, complete sequence Length = 116320 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 17153 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 17212 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 17213 caggccaggatccaaggtgaacaagaaggag 17243
>emb|AL845443.3| Human DNA sequence from clone DAQB-48K1 on chromosome 6 Contains the USP8P pseudogene for ubiquitin specific protease 8, the RPL3P2 pseudogene for ribosomal protein L3 pseudogene 2, the WASF5P pseudogene for WAS protein family, member 5, the HLA-B gene for major histocompatibility complex, class I, B, the DHFRP2 pseudogene for dihydrofolate reductase 2, the FGFR3P pseudogene for fibroblast growth factor receptor 3, the HLA-S gene for major histocompatibility complex, class I, S, the MICA gene for MHC class I polypeptide-related sequence A and 3 CpG islands, complete sequence Length = 148076 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 8580 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 8639 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 8640 caggccaggatccaaggtgaacaagaaggag 8670
>emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 on chromosome 6 contains the gene for HCR, the TCF19 gene for transcription factor 19, the POU5F1 gene for POU domain, class 5, transcription factor 1, a putative novel transcript, the HLA-C gene for major histocompatibility complex, class I, C, a ubiquitin specific protease 8 (USP8) pseudogene, a ribosomal protein L3 (RPL3) pseudogene, a WAS protein family, member 3 (WASF3) pseudogene and three CpG islands, complete sequence Length = 168887 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 140084 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 140143 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 140144 caggccaggatccaaggtgaacaagaaggag 140174
>emb|AL671883.3| Human DNA sequence from clone XXbac-248L24 on chromosome 6 contains the HLA-C gene for major histocompatibility complex, class I, C, a ubiquitin specific protease 8 (USP8) pseudogene, a ribosomal protein L3 (RPL3) pseudogene, a WAS protein family, member 3 (WASF3) pseudogene, the HLA-B gene for major histocompatibility complex, class I, B, a dihydrofolate reductase pseudogene, a fibroblast growth factor receptor 3 (FGFR3) pseudogene and two CpG islands, complete sequence Length = 120197 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 15635 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 15694 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 15695 caggccaggatccaaggtgaacaagaaggag 15725
>emb|CR388229.14| Human DNA sequence from clone DADB-104B20 on chromosome 6, complete sequence Length = 121659 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 120665 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 120724 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 120725 caggccaggatccaaggtgaacaagaaggag 120755
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 172173 cacctgactgctttccttggctacaaggctggcatgacccacatagtccgtgaggtcga 172115 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 caagaagaaggccttcaccaagta 469 ||||||||||||||| |||||||| Sbjct: 171359 caagaagaaggcctttaccaagta 171336
>emb|BX927178.8| Human DNA sequence from clone DAMA-387C9 on chromosome 6, complete sequence Length = 106199 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 19670 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 19729 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 19730 caggccaggatccaaggtgaacaagaaggag 19760
>emb|CR759828.5| Human DNA sequence from clone DAMC-153L10 on chromosome 6, complete sequence Length = 102821 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 19089 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 19148 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 19149 caggccaggatccaaggtgaacaagaaggag 19179
>emb|CR759814.6| Human DNA sequence from clone DADB-15N24 on chromosome 6, complete sequence Length = 63499 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 1006 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 1065 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 1066 caggccaggatccaaggtgaacaagaaggag 1096
>dbj|D83770.1| Homo sapiens DNA, homologous sequence for ribosomal protein L3 mRNA Length = 1241 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 109 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 168 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 169 caggccaggatccaaggtgaacaagaaggag 199
>emb|CR598731.1| full-length cDNA clone CS0DC005YP09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 941 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 121 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 180 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 181 caggccaggatccaaggtgaacaagaaggag 211
>ref|NG_001302.1| Homo sapiens ribosomal protein L3 pseudogene 2 (RPL3P2) on chromosome 6 Length = 1241 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 109 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 168 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 169 caggccaggatccaaggtgaacaagaaggag 199
>emb|AL115179.1|CNS01C7N Botrytis cinerea strain T4 cDNA library Length = 660 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 376 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 422
>emb|AL114042.1|CNS01BC2 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 363 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 409
>emb|AL113204.1|CNS01AOS Botrytis cinerea strain T4 cDNA library Length = 720 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 302 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 348
>emb|AL111661.1|CNS019HX Botrytis cinerea strain T4 cDNA library Length = 720 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 347 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 393
>gb|AF198447.1|AF198447 Emericella nidulans 60S ribosomal protein L3 (rpl3) gene, complete cds Length = 2763 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1251 ttctacaagaactggtacaagagcaagaagaaggctttcaccaagta 1297
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 663174 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 663115 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 663114 caggccaggatccaaggtgaacaagaaggag 663084
>gb|BC091460.1| Danio rerio ribosomal protein L3, mRNA (cDNA clone MGC:110350 IMAGE:7403740), complete cds Length = 1324 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 147 cacctgactgctttccttggctacaaggctggcatgacccacatagtccgtgaggtcga 205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 375 ttctacaagaactggtataagtccaagaagaaggcctttaccaagta 421
>gb|AC004204.1|AC004204 Homo sapiens clone UWGC:y3c018 from 6p21, complete sequence Length = 46797 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 21436 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 21377 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 21376 caggccaggatccaaggtgaacaagaaggag 21346
>dbj|D84394.1| Homo sapiens genomic DNA, 237 kb segment from 6p21.3 region including HLA genes, complete sequence Length = 236822 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 134344 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 134285 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 134284 caggccaggatccaaggtgaacaagaaggag 134254
>ref|XM_446452.1| Candida glabrata CBS138, CAGL0G02079g partial mRNA Length = 1164 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 416 gagaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||| |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 345 gagaagattctacaagaactggtacaagtccaagaagaaggccttcaccaagta 398
>ref|XM_863217.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 9 (LOC475009), mRNA Length = 1217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 155 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 214 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 215 ccggccaggatccaaggtgaacaagaagga 244 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 408 aagaagaaggccttcaccaa 427
>ref|XM_863213.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 8 (LOC475009), mRNA Length = 1266 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 148 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 207 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 208 ccggccaggatccaaggtgaacaagaagga 237 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 401 aagaagaaggccttcaccaa 420
>ref|XM_863205.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 6 (LOC475009), mRNA Length = 1166 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 144 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 203 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 204 ccggccaggatccaaggtgaacaagaagga 233 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 397 aagaagaaggccttcaccaa 416
>ref|XM_863203.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 5 (LOC475009), mRNA Length = 1162 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 144 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 203 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 204 ccggccaggatccaaggtgaacaagaagga 233
>ref|XM_863194.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 3 (LOC475009), mRNA Length = 1257 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 125 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 184 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 185 ccggccaggatccaaggtgaacaagaagga 214 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 378 aagaagaaggccttcaccaa 397
>ref|XM_532246.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 1 (LOC475009), mRNA Length = 1321 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 155 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 214 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 215 ccggccaggatccaaggtgaacaagaagga 244 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 408 aagaagaaggccttcaccaa 427
>ref|XM_531732.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 2 (LOC474504), mRNA Length = 1285 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 133 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggtgga 192 Query: 254 gaagcctggttccaagctgcacaagaagga 283 ||| || |||||| || |||||||||| Sbjct: 193 ccggccaggatccaaggtgaacaagaagga 222 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaa 466 |||||||||||||||||||| Sbjct: 386 aagaagaaggccttcaccaa 405
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 416 gagaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||| |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 183314 gagaagattctacaagaactggtacaagtccaagaagaaggccttcaccaagta 183367
>gb|BT011339.1| Drosophila melanogaster RH62603 full insert cDNA Length = 1396 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 386 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 430 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgagg 249 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 176 ggctacaaggccggcatgacccacattgtgcgcgagg 212
>ref|XM_863199.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 4 (LOC475009), mRNA Length = 1000 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 138 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggt 194
>ref|XM_863184.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 2 (LOC475009), mRNA Length = 360 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 125 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggt 181
>ref|XM_854746.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 5 (LOC474504), mRNA Length = 343 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggt 250 ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 125 ccacctcacagccttcctgggctacaaggccggcatgactcacatcgtgcgggaggt 181
>gb|BC042242.1| Xenopus laevis ribosomal protein L3, mRNA (cDNA clone MGC:53999 IMAGE:5571281), complete cds Length = 1308 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 150 ggctacaaggctggcatgactcacattgttcgtgaggtcga 190 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| ||| |||||||||||| ||||| ||||| Sbjct: 360 ttctacaagaactggtacaaatccaagaagaaggcgttcacaaagta 406
>ref|NM_169379.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RE, transcript variant E (RpL3), mRNA Length = 1829 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 605 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 649 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgagg 249 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 395 ggctacaaggccggcatgacccacattgtgcgcgagg 431
>ref|NM_169378.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RB, transcript variant B (RpL3), mRNA Length = 1579 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 355 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 399 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgagg 249 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 145 ggctacaaggccggcatgacccacattgtgcgcgagg 181
>ref|NM_079592.2| Drosophila melanogaster Ribosomal protein L3 CG4863-RA, transcript variant A (RpL3), mRNA Length = 1610 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 386 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 430 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgagg 249 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 176 ggctacaaggccggcatgacccacattgtgcgcgagg 212
>gb|AY961519.1| Lysiphlebus testaceipes ribosomal protein L3 (RpL3) mRNA, complete cds Length = 1239 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 352 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 396
>gb|AF016835.1|AF016835 Drosophila melanogaster ribosomal protein L3 (RpL3) mRNA, complete cds Length = 1381 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 385 ttctacaagaactggtacaagagcaagaagaaggcattcaccaag 429 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 213 ggctacaaggctggcatgactcacattgtgcgtgagg 249 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 175 ggctacaaggccggcatgacccacattgtgcgcgagg 211
>emb|CT033709.1| Platynereis dumerilii EST IB0AAA15CD12EM1 Length = 839 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 150 actgccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 202 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 396 aagaagaaggccttcaccaagta 418
>emb|CT033573.1| Platynereis dumerilii EST IB0AAA18AC07EM1 Length = 842 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 150 actgccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 202 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 396 aagaagaaggccttcaccaagta 418
>emb|CT033168.1| Platynereis dumerilii EST IB0AAA25CD10EM1 Length = 927 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 154 actgccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 206 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 400 aagaagaaggccttcaccaagta 422
>emb|CT032804.1| Platynereis dumerilii EST IB0AAA31BC01EM1 Length = 811 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 150 actgccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 202 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 396 aagaagaaggccttcaccaagta 418
>emb|CT032452.1| Platynereis dumerilii EST IB0AAA38AD06EM1 Length = 895 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 201 actgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 154 actgccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 206 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 400 aagaagaaggccttcaccaagta 422
>emb|AL022326.1|HS333H23 Human DNA sequence from clone RP3-333H23 on chromosome 22q12.1-12.3 Contains the (possibly alternatively spliced) RPL3 gene for 60S Ribosomal Protein L3 and the threefold alternatively spliced gene for Synaptogyrin 1A, 1B and 1C (SYNGR1A, SYBGRIB, SYNGR1C), both genes downstream of a putative CpG island. Contains ESTs, an STS, GSSs, and a ca repeat (D22S1155) polymorphism, complete sequence Length = 122888 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 51510 ccacctcacagccttcctgggatacaaggctggcatgactcacatcgtgcgggaagtcga 51451
>gb|BT005702.1| Arabidopsis thaliana clone U20878 putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1204 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 216 tacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaagctgcac 275 ||||| ||||| ||||||||||||||| | || || || || ||||| || || || ||| Sbjct: 145 tacaaagctgggatgactcacattgtgagagatgttgaaaaacctggatcaaaactacac 204 Query: 276 aagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgttgga 335 |||||||| |||||||| ||||| || || |||||||||| || || || |||| || Sbjct: 205 aagaaggaaacatgtgaagctgtgacgatcattgagacacctccaatggtggttgtaggt 264 Query: 336 cttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggcacag 395 | |||| ||||| ||||| |||||||| | || |||| | |||| ||||| ||| Sbjct: 265 gtggttggttatgtaaagacacctcgtggtctgcggtctctatgcactgtgtgggctcag 324 Query: 396 catctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaagaag 455 ||||| |||||||| |||| || |||||||||||||||||| |||| ||||||||| Sbjct: 325 catctgagcgaagaattgagaaggaggttctacaagaactgggccaagtcaaagaagaag 384 Query: 456 gccttcac 463 || ||||| Sbjct: 385 gctttcac 392
>gb|BT003869.1| Arabidopsis thaliana clone RAFL15-38-D07 (R20878) putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 216 tacaaggctggcatgactcacattgtgcgtgaggtcgagaagcctggttccaagctgcac 275 ||||| ||||| ||||||||||||||| | || || || || ||||| || || || ||| Sbjct: 189 tacaaagctgggatgactcacattgtgagagatgttgaaaaacctggatcaaaactacac 248 Query: 276 aagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgttgga 335 |||||||| |||||||| ||||| || || |||||||||| || || || |||| || Sbjct: 249 aagaaggaaacatgtgaagctgtgacgatcattgagacacctccaatggtggttgtaggt 308 Query: 336 cttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggcacag 395 | |||| ||||| ||||| |||||||| | || |||| | |||| ||||| ||| Sbjct: 309 gtggttggttatgtaaagacacctcgtggtctgcggtctctatgcactgtgtgggctcag 368 Query: 396 catctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaagaag 455 ||||| |||||||| |||| || |||||||||||||||||| |||| ||||||||| Sbjct: 369 catctgagcgaagaattgagaaggaggttctacaagaactgggccaagtcaaagaagaag 428 Query: 456 gccttcac 463 || ||||| Sbjct: 429 gctttcac 436
>ref|XM_958224.1| Neurospora crassa OR74A hypothetical protein ( (AF198447) 60S ribosomal protein L3 [Emericella nidulans] ) (NCU06843.1) partial mRNA Length = 1140 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 313 ttctacaagaactggtacaagtccaagaagaaggccttcaccaagta 359
>ref|XM_327128.1| Neurospora crassa OR74A hypothetical protein ( (AF198447) 60S ribosomal protein L3 [Emericella nidulans] ) (NCU06843.1) partial mRNA Length = 1140 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 313 ttctacaagaactggtacaagtccaagaagaaggccttcaccaagta 359
>dbj|AB169493.1| Macaca fascicularis brain cDNA, clone: QccE-11024, similar to human ribosomal protein L3 (RPL3), mRNA, RefSeq: NM_000967.2 Length = 1310 Score = 69.9 bits (35), Expect = 8e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct: 150 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgcgggaagtcga 209 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || || ||| || ||||||||||| Sbjct: 210 caggccaggatctaaggtgaacaagaaggag 240
>emb|BX284750.1|NCB17B1 Neurospora crassa DNA linkage group II BAC clone B17B1 Length = 102737 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 50246 ttctacaagaactggtacaagtccaagaagaaggccttcaccaagta 50292
>emb|CT033251.1| Platynereis dumerilii EST IB0AAA24AG04EM1 Length = 903 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 159 aaggctttccccagagatgaccaatccaagaaatgccacctcactgccttccttggctac 218 ||||||||||||| |||||||| |||| |||||| | || |||||||| |||||| Sbjct: 110 aaggctttccccaaggatgaccagaacaagccatgccatttgaccgccttcctgggctac 169 Query: 219 aaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| ||||| ||| |||||||||||||||| Sbjct: 170 aaggctggaatgacccacgttgtgcgtgaggtcga 204 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagtatgc 472 |||||||||||||||||||||||||| Sbjct: 398 aagaagaaggccttcaccaagtatgc 423
>emb|CT033204.1| Platynereis dumerilii EST IB0AAA24DG07EM1 Length = 886 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 159 aaggctttccccagagatgaccaatccaagaaatgccacctcactgccttccttggctac 218 ||||||||||||| |||||||| |||| |||||| | || |||||||| |||||| Sbjct: 112 aaggctttccccaaggatgaccagaacaagccatgccatttgaccgccttcctgggctac 171 Query: 219 aaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| ||||| ||| |||||||||||||||| Sbjct: 172 aaggctggaatgacccacgttgtgcgtgaggtcga 206 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagtatgc 472 |||||||||||||||||||||||||| Sbjct: 400 aagaagaaggccttcaccaagtatgc 425
>emb|CT032838.1| Platynereis dumerilii EST IB0AAA30CG08EM1 Length = 865 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 159 aaggctttccccagagatgaccaatccaagaaatgccacctcactgccttccttggctac 218 ||||||||||||| |||||||| |||| |||||| | || |||||||| |||||| Sbjct: 119 aaggctttccccaaggatgaccagaacaagccatgccatttgaccgccttcctgggctac 178 Query: 219 aaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| ||||| ||| |||||||||||||||| Sbjct: 179 aaggctggaatgacccacgttgtgcgtgaggtcga 213 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagtatgc 472 |||||||||||||||||||||||||| Sbjct: 407 aagaagaaggccttcaccaagtatgc 432
>emb|CT032638.1| Platynereis dumerilii EST IB0AAA34CD10EM1 Length = 897 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 159 aaggctttccccagagatgaccaatccaagaaatgccacctcactgccttccttggctac 218 ||||||||||||| |||||||| |||| |||||| | || |||||||| |||||| Sbjct: 102 aaggctttccccaaggatgaccagaacaagccatgccatttgaccgccttcctgggctac 161 Query: 219 aaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| ||||| ||| |||||||||||||||| Sbjct: 162 aaggctggaatgacccacgttgtgcgtgaggtcga 196 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagtatgc 472 |||||||||||||||||||||||||| Sbjct: 390 aagaagaaggccttcaccaagtatgc 415
>ref|XM_455822.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F16511g predicted mRNA Length = 1164 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 416 gagaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||| |||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 345 gagaagattctacaagaactggtacaagtccaagaagaaggctttcaccaagta 398
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 416 gagaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||| |||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 1524239 gagaagattctacaagaactggtacaagtccaagaagaaggctttcaccaagta 1524292
>emb|CT032721.1| Platynereis dumerilii EST IB0AAA33AC11EM1 Length = 850 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 204 gccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 153 gccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 202 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 396 aagaagaaggccttcaccaagta 418
>emb|CT032559.1| Platynereis dumerilii EST IB0AAA36BG02EM1 Length = 885 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 204 gccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 155 gccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 204 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 398 aagaagaaggccttcaccaagta 420
>emb|CT032280.1| Platynereis dumerilii EST IB0AAA41DA03EM1 Length = 908 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 204 gccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 155 gccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 204 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 398 aagaagaaggccttcaccaagta 420
>ref|XM_457044.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B01782g) partial mRNA Length = 1170 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 417 agaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 ||||| |||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 346 agaagattctacaagaactggtacaagtccaagaagaaggctttcaccaagta 398
>emb|AM048987.1| Scarabaeus laticollis mRNA for ribosomal protein L3e (rpL3e gene) Length = 1233 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcac 463 ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 352 ttctacaagaattggtacaagagcaagaagaaggccttcac 392
>emb|BX017508.1|CNS08LO8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA26BH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 562 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 410 ttctacaagaactggcgcgcgagcaagaagaaggccttcaccaag 454
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 417 agaaggttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 ||||| |||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 140757 agaagattctacaagaactggtacaagtccaagaagaaggctttcaccaagta 140705
>gb|AY961520.1| Lysiphlebus testaceipes ribosomal protein L3 variant 1 (RpL3) mRNA, complete cds Length = 1239 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 |||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 352 ttctacaagaactggtacaagagcaagaaaaaggcattcaccaag 396
>emb|CT032610.1| Platynereis dumerilii EST IB0AAA35BE08EM1 Length = 874 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 205 ccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||| |||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 157 ccttcctgggctacaaggctggaatgacccacgttgtgcgtgaggtcga 205 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 447 aagaagaaggccttcaccaagtatgc 472 |||||||||||||||||||||||||| Sbjct: 399 aagaagaaggccttcaccaagtatgc 424
>gb|AF401554.1| Ictalurus punctatus ribosomal protein L3 mRNA, complete cds Length = 1299 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 125 ccacctcacagctttcctgggctacaaagctggcatgacccacattgtccgtgaagtcga 184 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||| ||||||| ||| |||||||||||| ||||||||||| Sbjct: 354 ttctacaaaaactggtacaaatccaagaagaaggctttcaccaagta 400
>gb|BC058494.1| Rattus norvegicus ribosomal protein L3, mRNA (cDNA clone MGC:72934 IMAGE:6887923), complete cds Length = 1320 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgt 241 |||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct: 153 cacctcacagccttcctagggtacaaggctggcatgacccacattgt 199
>ref|XM_386465.1| Gibberella zeae PH-1 chromosome 3 RL3_NEUCR 60S ribosomal protein L3 (FG06289.1) partial mRNA Length = 1137 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaagta 469 |||||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 313 ttctacaagaactggtacaagtccaagaagaaggctttcaccaagta 359
>emb|X62166.1|RRRPL3 R.rattus mRNA for ribosomal protein L3 Length = 1316 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgt 241 |||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct: 154 cacctcacagccttcctagggtacaaggctggcatgacccacattgt 200
>gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, complete sequence Length = 158330 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 |||||||| |||||||| || ||||||||||||||||| ||||| ||| | || ||||| Sbjct: 68591 ccacctcatagccttcctgggatacaaggctggcatgacccacatcgtgtgggaagtcga 68532 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 68531 caggccaggatccaaggtgaacaagaaggag 68501 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 447 aagaagaaggccttcaccaagta 469 ||||||||||||||||||||||| Sbjct: 68341 aagaagaaggccttcaccaagta 68319
>ref|NM_198753.1| Rattus norvegicus ribosomal protein L3 (Rpl3), mRNA Length = 1320 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcacattgt 241 |||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct: 153 cacctcacagccttcctagggtacaaggctggcatgacccacattgt 199
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| ||||| ||| | || ||| | Sbjct: 214263 ccacctcacagccttcctgggatacaaggctggcatgacccacatcgtgagggaagtcaa 214204 Query: 254 gaagcctggttccaagctgcacaagaaggag 284 | ||| || |||||| || ||||||||||| Sbjct: 214203 caggccaggatccaaggtgaacaagaaggag 214173
>gb|M32655.1|ATHRPCB Arabidopsis thaliana ribosomal protein gene, complete cds Length = 2068 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/191 (79%) Strand = Plus / Plus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 ||||||||||| |||||||| ||||| || || |||||||||| || || || ||||| Sbjct: 579 cacaagaaggaaacatgtgaagctgtgacgatcattgagacacctccaatggtggttgtt 638 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 || | |||| ||||| ||||| |||||||| | || |||| | |||| ||||| Sbjct: 639 ggtgtggttggttatgtaaagacacctcgtggtctgcggtctctatgcactgtgtgggct 698 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| |||||||| |||| || |||||||||||||||||| |||| |||||| Sbjct: 699 cagcatctgagcgaagaattgagaaggaggttctacaagaactgggccaagtcaaagaag 758 Query: 453 aaggccttcac 463 ||||| ||||| Sbjct: 759 aaggctttcac 769
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete sequence Length = 84432 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/191 (79%) Strand = Plus / Plus Query: 273 cacaagaaggagacatgtgaggctgtcaccattgttgagacaccccctattgttattgtt 332 ||||||||||| |||||||| ||||| || || |||||||||| || || || ||||| Sbjct: 49662 cacaagaaggaaacatgtgaagctgtgacgatcattgagacacctccaatggtggttgtt 49721 Query: 333 ggacttgttgcctatgtgaagactcctcgtggccatcgtactctcaactctgtctgggca 392 || | |||| ||||| ||||| |||||||| | || |||| | |||| ||||| Sbjct: 49722 ggtgtggttggttatgtaaagacacctcgtggtctgcggtctctatgcactgtgtgggct 49781 Query: 393 cagcatctcagcgaagatgtgaggagaaggttctacaagaactggtgcaagagcaagaag 452 |||||||| |||||||| |||| || |||||||||||||||||| |||| |||||| Sbjct: 49782 cagcatctgagcgaagaattgagaaggaggttctacaagaactgggccaagtcaaagaag 49841 Query: 453 aaggccttcac 463 ||||| ||||| Sbjct: 49842 aaggctttcac 49852
>gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, complete sequence Length = 170043 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 194 ccacctcactgccttccttggctacaaggctggcatgactcacattgtgcgtgaggtcga 253 ||||||||| |||||||| || ||||||||||||||||| |||| |||| || ||||| Sbjct: 107482 ccacctcacagccttcctgggatacaaggctggcatgaccaacatcatgcgggaagtcga 107423 Query: 254 gaagcctggttccaagctgcacaagaagga 283 | ||| || |||||| || |||||||||| Sbjct: 107422 caggccaggatccaaggtgaacaagaagga 107393
>ref|NM_005061.2| Homo sapiens ribosomal protein L3-like (RPL3L), mRNA Length = 1547 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 ||||||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 399 ttctacaaggactggcacaagagcaagaagaaagccttcaccaag 443 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 195 cacctcactgccttccttggctacaaggctggcatgactcaca 237 |||||||| |||||||| ||||||||||| |||||||| |||| Sbjct: 171 cacctcacggccttcctgggctacaaggcgggcatgacccaca 213
>emb|BX070443.1|CNS09QIN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 397 ttctacaagaactggcacgcgagcaagaagaaggccttcaccaag 441
>emb|BX070228.1|CNS09QCO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7BA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 736 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 423 ttctacaagaactggtgcaagagcaagaagaaggccttcaccaag 467 ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 381 ttctacaagaactggcacgcgagcaagaagaaggccttcaccaag 425 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 tacaaggctggcatgactcacattgtgc 243 ||||||||||||||||| ||||| |||| Sbjct: 174 tacaaggctggcatgacgcacatcgtgc 201 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,475,987 Number of Sequences: 3902068 Number of extensions: 6475987 Number of successful extensions: 180738 Number of sequences better than 10.0: 1423 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 167845 Number of HSP's gapped (non-prelim): 12764 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
