ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart37b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative... 196 5e-47
2gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III ... 196 5e-47
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 196 5e-47
4gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds 196 5e-47
5gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 196 5e-47
6dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
7dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 196 5e-47
9emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 48 0.030
10dbj|AB035668.1| Tulipa bakeri tbc1 mRNA for bulb chitinase-1, co... 48 0.030
11dbj|D84193.1| Streptomyces lividans gene for chitinase, complete... 48 0.030
12dbj|AB017009.1| Streptomyces coelicolor gene for ChiB, partial cds 48 0.030
13gb|AE004591.1| Pseudomonas aeruginosa PAO1, section 152 of 529 o... 46 0.12
14ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative... 42 1.9
15gb|AC119426.2| Homo sapiens chromosome 1 clone RP11-203A2, compl... 42 1.9
16gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 42 1.9
17dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III ch... 42 1.9
19dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
21dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
22dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
23dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
24emb|CR376854.12| Zebrafish DNA sequence from clone DKEY-197C15 i... 42 1.9
25ref|NM_121779.1| Arabidopsis thaliana ATP binding / ATPase/ nucl... 40 7.3
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.3
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.3
28gb|AC134595.3| Mus musculus BAC clone RP23-388E14 from chromosom... 40 7.3
29gb|AC124467.3| Mus musculus BAC clone RP24-163L18 from chromosom... 40 7.3
30emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.3
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.3
32gb|AF451898.1| Heliothis zea virus 1, complete genome 40 7.3
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.3
34dbj|AB006706.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.3
35gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, comp... 40 7.3
36gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 7.3

>ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           RCB4 (OSJNBa0032I20.7), mRNA
          Length = 924

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
           ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 79  aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 138

                                                                       
Query: 220 gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
           ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 139 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 198

                                                                       
Query: 280 accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
           ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 199 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 258

                                                                       
Query: 340 gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
           |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 259 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 318

                                                                       
Query: 400 gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
           |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 319 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 375

                                                                       
Query: 460 gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
           |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 376 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 435

                                
Query: 520 ctggacggcatcgacatcgac 540
           |||||||||||||||||||||
Sbjct: 436 ctggacggcatcgacatcgac 456



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>gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III chitinase RCB4
           (Rcb4) mRNA, complete cds
          Length = 1158

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
           ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 131 aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 190

                                                                       
Query: 220 gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
           ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 191 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 250

                                                                       
Query: 280 accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
           ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 251 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 310

                                                                       
Query: 340 gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
           |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 311 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 370

                                                                       
Query: 400 gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
           |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 371 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 427

                                                                       
Query: 460 gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
           |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 428 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 487

                                
Query: 520 ctggacggcatcgacatcgac 540
           |||||||||||||||||||||
Sbjct: 488 ctggacggcatcgacatcgac 508



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                            
Query: 160      aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
                ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 14044922 aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 14044981

                                                                            
Query: 220      gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
                ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 14044982 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 14045041

                                                                            
Query: 280      accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
                ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 14045042 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 14045101

                                                                            
Query: 340      gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
                |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 14045102 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 14045161

                                                                            
Query: 400      gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
                |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 14045162 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 14045218

                                                                            
Query: 460      gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
                |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 14045219 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 14045278

                                     
Query: 520      ctggacggcatcgacatcgac 540
                |||||||||||||||||||||
Sbjct: 14045279 ctggacggcatcgacatcgac 14045299



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 248      acttcatcctcgcgttcgtcatcgactac 276
                ||||||||||||| |||| ||||||||||
Sbjct: 14076023 acttcatcctcgccttcgccatcgactac 14076051



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>gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds
          Length = 941

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
           ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 4   aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 63

                                                                       
Query: 220 gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
           ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 64  gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 123

                                                                       
Query: 280 accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
           ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 124 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 183

                                                                       
Query: 340 gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
           |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 184 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 243

                                                                       
Query: 400 gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
           |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 244 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 300

                                                                       
Query: 460 gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
           |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 301 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 360

                                
Query: 520 ctggacggcatcgacatcgac 540
           |||||||||||||||||||||
Sbjct: 361 ctggacggcatcgacatcgac 381



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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 160   aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
             ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 61051 aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 61110

                                                                         
Query: 220   gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
             ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 61111 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 61170

                                                                         
Query: 280   accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
             ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 61171 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 61230

                                                                         
Query: 340   gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
             |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 61231 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 61290

                                                                         
Query: 400   gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
             |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 61291 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 61347

                                                                         
Query: 460   gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
             |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 61348 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 61407

                                  
Query: 520   ctggacggcatcgacatcgac 540
             |||||||||||||||||||||
Sbjct: 61408 ctggacggcatcgacatcgac 61428



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 248   acttcatcctcgcgttcgtcatcgactac 276
             ||||||||||||| |||| ||||||||||
Sbjct: 92152 acttcatcctcgccttcgccatcgactac 92180



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>dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093F02, full
           insert sequence
          Length = 1211

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
           ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 132 aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 191

                                                                       
Query: 220 gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
           ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 192 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 251

                                                                       
Query: 280 accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
           ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 252 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 311

                                                                       
Query: 340 gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
           |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 312 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 371

                                                                       
Query: 400 gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
           |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 372 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 428

                                                                       
Query: 460 gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
           |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 429 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 488

                                
Query: 520 ctggacggcatcgacatcgac 540
           |||||||||||||||||||||
Sbjct: 489 ctggacggcatcgacatcgac 509



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>dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E04, full
           insert sequence
          Length = 1096

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
           ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 17  aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 76

                                                                       
Query: 220 gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
           ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 77  gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 136

                                                                       
Query: 280 accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
           ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 137 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 196

                                                                       
Query: 340 gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
           |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 197 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 256

                                                                       
Query: 400 gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
           |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 257 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 313

                                                                       
Query: 460 gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
           |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 314 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 373

                                
Query: 520 ctggacggcatcgacatcgac 540
           |||||||||||||||||||||
Sbjct: 374 ctggacggcatcgacatcgac 394



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  196 bits (99), Expect = 5e-47
 Identities = 311/381 (81%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                            
Query: 160      aactctaacctcttccgcgactacatcggcgccctttacaacggcgtcaggttcgcggac 219
                ||||| ||||||||||| ||||||||||||||| | | ||||||||| | |||| | |||
Sbjct: 14053164 aactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgac 14053223

                                                                            
Query: 220      gtgccgatcaacccgcgcgcccggttcgacttcatcctcgcgttcgtcatcgactacacc 279
                ||||| ||||| |||   | ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 14053224 gtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacacc 14053283

                                                                            
Query: 280      accgccacggagcccccgaccccgaccaacggccggttcaacgtcttctggcaggacacg 339
                ||||  ||| | || ||||||||||||||||||  ||||||| ||||||||||| |||||
Sbjct: 14053284 accgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacg 14053343

                                                                            
Query: 340      gtgctcacccccgccgcgatcgccgaggtcaagcggcggaacccgaacgtgcgcgtggca 399
                |||||||||||  | ||  ||||   | |||||| | | ||||| |||||| | ||||| 
Sbjct: 14053344 gtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggcc 14053403

                                                                            
Query: 400      gtcagcctcggcggcgccacggtcaacggcaggcccgtgttcttcaacgccacctccggc 459
                |||||| | ||||||||||| || |||| | | || || |||||||||  ||||||   |
Sbjct: 14053404 gtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctc---c 14053460

                                                                            
Query: 460      gtcgactcctgggtccgcaacgccgtcgactcgctaaccggcatcatccagcggtacggc 519
                |||||||| |||||   |||||| ||||| || || |||||||||||||||    ||  |
Sbjct: 14053461 gtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaac 14053520

                                     
Query: 520      ctggacggcatcgacatcgac 540
                |||||||||||||||||||||
Sbjct: 14053521 ctggacggcatcgacatcgac 14053541



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 248      acttcatcctcgcgttcgtcatcgactac 276
                ||||||||||||| |||| ||||||||||
Sbjct: 14084265 acttcatcctcgccttcgccatcgactac 14084293



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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 513    gtacggcctggacggcatcgacatcgac 540
              |||||||||||||||| |||||||||||
Sbjct: 192961 gtacggcctggacggcctcgacatcgac 192988



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>dbj|AB035668.1| Tulipa bakeri tbc1 mRNA for bulb chitinase-1, complete cds
          Length = 1106

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 248 acttcatcctcgcgttcgtcatcgactacacc 279
           ||||||||||||| |||| |||||||||||||
Sbjct: 175 acttcatcctcgctttcgccatcgactacacc 206



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>dbj|D84193.1| Streptomyces lividans gene for chitinase, complete cds
          Length = 2097

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 513  gtacggcctggacggcatcgacatcgac 540
            |||||||||||||||| |||||||||||
Sbjct: 1275 gtacggcctggacggcctcgacatcgac 1302



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>dbj|AB017009.1| Streptomyces coelicolor gene for ChiB, partial cds
          Length = 2687

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 513  gtacggcctggacggcatcgacatcgac 540
            |||||||||||||||| |||||||||||
Sbjct: 1711 gtacggcctggacggcctcgacatcgac 1738



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>gb|AE004591.1| Pseudomonas aeruginosa PAO1, section 152 of 529 of the complete
            genome
          Length = 11040

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 405  cctcggcggcgccacggtcaacg 427
            |||||||||||||||||||||||
Sbjct: 9741 cctcggcggcgccacggtcaacg 9763



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>ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           (OSJNBa0032I20.10), mRNA
          Length = 861

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 95  acttcatcctcgccttcgccatcgactac 123



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>gb|AC119426.2| Homo sapiens chromosome 1 clone RP11-203A2, complete sequence
          Length = 52339

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 28    accaaacaaaagcaggagtaacaaa 52
             ||||||||||||||| |||||||||
Sbjct: 12063 accaaacaaaagcagtagtaacaaa 12087



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>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 248   acttcatcctcgcgttcgtcatcgactac 276
             ||||||||||||| |||| ||||||||||
Sbjct: 15661 acttcatcctcgccttcgccatcgactac 15689



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 278     ccaccgccacggagcccccgaccccgacc 306
               ||||||||| ||| |||||||||||||||
Sbjct: 8216685 ccaccgccaaggaacccccgaccccgacc 8216713



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>gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III chitinase (chib1) gene,
           complete cds
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 146 acttcatcctcgccttcgccatcgactac 174



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>dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450F09
          Length = 148752

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 278   ccaccgccacggagcccccgaccccgacc 306
             ||||||||| ||| |||||||||||||||
Sbjct: 40607 ccaccgccaaggaacccccgaccccgacc 40635



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>dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C10, full
           insert sequence
          Length = 989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 151 acttcatcctcgccttcgccatcgactac 179



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>dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C04, full
           insert sequence
          Length = 1053

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 151 acttcatcctcgccttcgccatcgactac 179



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>dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G07, full
           insert sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 151 acttcatcctcgccttcgccatcgactac 179



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>dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G07, full
           insert sequence
          Length = 1069

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 248 acttcatcctcgcgttcgtcatcgactac 276
           ||||||||||||| |||| ||||||||||
Sbjct: 151 acttcatcctcgccttcgccatcgactac 179



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>emb|CR376854.12| Zebrafish DNA sequence from clone DKEY-197C15 in linkage group 24,
              complete sequence
          Length = 201044

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aacaaaagcaggagtaacaaa 52
              |||||||||||||||||||||
Sbjct: 173168 aacaaaagcaggagtaacaaa 173148



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>ref|NM_121779.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT5G17730 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  ctccaactctaacctcttcc 175
            ||||||||||||||||||||
Sbjct: 1350 ctccaactctaacctcttcc 1331



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 349    cccgccgcgatcgccgaggtcaag 372
              |||||||||||||||||| |||||
Sbjct: 685997 cccgccgcgatcgccgagttcaag 685974



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 349     cccgccgcgatcgccgaggtcaag 372
               |||||||||||||||||| |||||
Sbjct: 1210467 cccgccgcgatcgccgagttcaag 1210444



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>gb|AC134595.3| Mus musculus BAC clone RP23-388E14 from chromosome 15, complete sequence
          Length = 189263

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     aacaaaagcaggagtaacaa 51
              ||||||||||||||||||||
Sbjct: 167561 aacaaaagcaggagtaacaa 167580



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>gb|AC124467.3| Mus musculus BAC clone RP24-163L18 from chromosome 15, complete sequence
          Length = 169366

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     aacaaaagcaggagtaacaa 51
              ||||||||||||||||||||
Sbjct: 135667 aacaaaagcaggagtaacaa 135648



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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    cgccgcgatcgccgaggtca 370
              ||||||||||||||||||||
Sbjct: 342587 cgccgcgatcgccgaggtca 342568



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 349     cccgccgcgatcgccgaggtcaag 372
               |||||||||||||||||| |||||
Sbjct: 1113377 cccgccgcgatcgccgagttcaag 1113354



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>gb|AF451898.1| Heliothis zea virus 1, complete genome
          Length = 228089

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    aaactccaactctaacctct 172
              ||||||||||||||||||||
Sbjct: 189248 aaactccaactctaacctct 189229



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 513     gtacggcctggacggcatcgacatcgac 540
               |||||||||||||||| | |||||||||
Sbjct: 3178412 gtacggcctggacggcctggacatcgac 3178385



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>dbj|AB006706.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVA3
          Length = 81701

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   ctccaactctaacctcttcc 175
             ||||||||||||||||||||
Sbjct: 34811 ctccaactctaacctcttcc 34830



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>gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, complete sequence
          Length = 202822

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    agcaggagtaacaaaagcta 57
             ||||||||||||||||||||
Sbjct: 93565 agcaggagtaacaaaagcta 93584



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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 402     cagcctcggcggcgccacgg 421
               ||||||||||||||||||||
Sbjct: 2260172 cagcctcggcggcgccacgg 2260153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,887,135
Number of Sequences: 3902068
Number of extensions: 2887135
Number of successful extensions: 55534
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54684
Number of HSP's gapped (non-prelim): 842
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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