ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart37b06 |
|---|---|
| Clone Library Name | barley_pub |
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)| Length = 335 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/77 (25%), Positives = 40/77 (51%) Frame = +2 Query: 326 GLSTFDMADHYGPAEDLYGMFINKVRRERPPEMLEQVRGLTKWVPPPVKMTRSYVEENIN 505 G++ D + +YGP+E LYG ++ +R E P + + + +R +V +++ Sbjct: 48 GINAIDTSPYYGPSEVLYGRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVH 107 Query: 506 RSRKRMDVAALDMLQFH 556 RS +R+ LD++ H Sbjct: 108 RSCERLHTTYLDLVYLH 124
>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ| Length = 346 Score = 39.7 bits (91), Expect = 0.006 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Frame = +2 Query: 212 ESSLAICRVLNGMWQTSGGWGRIDRADAVDAMLAYA-DAGLSTFDMADHYGP----AEDL 376 +S L + + G+W +G ++ ++ A+L A D G++ FD+A++YGP AE+ Sbjct: 20 KSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEEN 76 Query: 377 YGMFINKVRRERPPEMLEQVR-GLTKWVPPPVKM--TRSYVEENINRSRKRMDVAALDML 547 +G + + E++ + G W P P +R Y+ ++++S KRM + +D+ Sbjct: 77 FGRLLREDFAAYRDELIISTKAGYDMW-PGPYGSGGSRKYLLASLDQSLKRMGLEYVDIF 135 Query: 548 QFH 556 H Sbjct: 136 YSH 138
>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ| Length = 346 Score = 39.7 bits (91), Expect = 0.006 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Frame = +2 Query: 212 ESSLAICRVLNGMWQTSGGWGRIDRADAVDAMLAYA-DAGLSTFDMADHYGP----AEDL 376 +S L + + G+W +G ++ ++ A+L A D G++ FD+A++YGP AE+ Sbjct: 20 KSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEEN 76 Query: 377 YGMFINKVRRERPPEMLEQVR-GLTKWVPPPVKM--TRSYVEENINRSRKRMDVAALDML 547 +G + + E++ + G W P P +R Y+ ++++S KRM + +D+ Sbjct: 77 FGRLLREDFAAYRDELIISTKAGYDMW-PGPYGSGGSRKYLLASLDQSLKRMGLEYVDIF 135 Query: 548 QFH 556 H Sbjct: 136 YSH 138
>GS69_BACSU (P80874) General stress protein 69 (EC 1.1.1.-) (GSP69) (AKR11B)| Length = 331 Score = 37.4 bits (85), Expect = 0.029 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 5/120 (4%) Frame = +2 Query: 212 ESSLAICRVLNGMWQTSGG-WGRIDRADAVDAMLAYADAGLSTFDMADHYG--PAEDLYG 382 ++ + R+ G W G WG D +++ + A D G++ D A YG +E++ G Sbjct: 8 DTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVG 67 Query: 383 MFINKVRRERPPEMLEQVRGLTKWVPPPV--KMTRSYVEENINRSRKRMDVAALDMLQFH 556 I + + +++ + W + R+ + E + S KR+ +D+ Q H Sbjct: 68 KAIKEYGKR--DQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVH 125
>TARP2_CHLTR (Q6GX35) Translocated actin-recruiting phosphoprotein (Tarp protein)| Length = 1005 Score = 36.6 bits (83), Expect = 0.049 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = +2 Query: 131 AGFVGPAVETATPGPMAATLASSRGGTESSLAICRVLNGMWQTSGGWGRIDRADAVDAML 310 +G V + + P P TL + G T +SL + + T+GG GRI ++ +L Sbjct: 816 SGSVQTLLPSPPPTPSTTTLRTGTGATTTSLMMGGPIKADIITTGGGGRIPGGGTLEKLL 875 Query: 311 AYADAGLS-TFD-MADHYGPAEDLYGMFINKVRRE 409 A L +FD D E G +NK R+E Sbjct: 876 PRIRAHLDISFDGQGDLVSTEEPQLGSIVNKFRKE 910
>TARP1_CHLTR (O84462) Translocated actin-recruiting phosphoprotein (Tarp protein)| Length = 1005 Score = 36.2 bits (82), Expect = 0.064 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = +2 Query: 131 AGFVGPAVETATPGPMAATLASSRGGTESSLAICRVLNGMWQTSGGWGRIDRADAVDAML 310 +G V + + P P TL + G T +SL + + T+GG GRI ++ +L Sbjct: 816 SGSVQTLLPSPPPTPSTTTLRTGTGATTTSLMMGGPIKADIITTGGGGRIPGGGTLEKLL 875 Query: 311 AYADAGLS-TFD-MADHYGPAEDLYGMFINKVRRE 409 A L +FD D E G +NK R+E Sbjct: 876 PRIRAHLDISFDAQGDLVSTEEPQLGSIVNKFRQE 910
>TRPF_LACLA (Q02002) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 351 Score = 35.8 bits (81), Expect = 0.084 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = +2 Query: 380 GMFINKVRRERPPEMLEQVRGLTKWVPPPVKMTRSYVEENINRSRKRMDVAALDMLQFH 556 G ++ +R+ PE + Q+ T VP VK +V+E I+ +K + VA LD++Q H Sbjct: 26 GFILSPSKRQVAPEKILQI---TNDVPKTVKKVGVFVDEPIDFVKKAIQVAQLDLVQLH 81
>CWC27_ASHGO (Q75A74) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)| Length = 303 Score = 33.1 bits (74), Expect = 0.54 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = +2 Query: 119 PARCAGFVGPAVETATPGP---MAATLASSRGGTESSLAICRVLNG 247 P+RCA GPA A+PGP +A L++ GT SSLA R G Sbjct: 253 PSRCASLAGPA--PASPGPVTDLAPQLSAREQGTLSSLAEFRCKRG 296
>FGRL1_HUMAN (Q8N441) Fibroblast growth factor receptor-like 1 precursor (FGF| receptor-like protein 1) (Fibroblast growth factor receptor 5) (FGFR-like protein) (FGF homologous factor receptor) Length = 504 Score = 32.7 bits (73), Expect = 0.71 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = -3 Query: 273 PHPPLVCHMPLSTRQMASDDSVPPRLLARVAAIGPGVAVSTAGPTNPAHL 124 P PPL H P T + S D P L A A G G+ P P HL Sbjct: 410 PAPPLPGHRPPGTARDRSGDKDLPSLAALSAGPGVGLCEEHGSPAAPQHL 459
>PSD9_RAT (Q9WTV5) 26S proteasome non-ATPase regulatory subunit 9 (26S| proteasome regulatory subunit p27) (Transactivating protein Bridge-1) Length = 222 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -3 Query: 234 RQMASDDSVPPRLLARVAAIGPGVAVSTAG 145 R++ASD P+ ARV +I PG S AG Sbjct: 122 RRLASDSPALPKAFARVNSISPGSPASIAG 151
>TRPF_PSESM (Q87YI1) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 206 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 431 QVRGLTKWVPPPVKMTRSYVEENINRSRKRMDVAALDMLQFH 556 Q R + +PP + +V + + +D ALDMLQFH Sbjct: 44 QARAIIAALPPFITTVGLFVNASRCELNETLDAVALDMLQFH 85
>VL2_HPV07 (P36745) Minor capsid protein L2| Length = 456 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 252 HMPLSTRQMASDDSVPPRLLARVAAIGPGVAVSTAGPTNPA 130 ++PLST A +PP+ LA P V V T PT+P+ Sbjct: 71 YVPLSTGSRA----IPPKSLAPDVIARPPVVVDTVAPTDPS 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,086,270 Number of Sequences: 219361 Number of extensions: 961364 Number of successful extensions: 3531 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3526 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
