>IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2|
          Length = 346

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
 Frame = +2

Query: 233 AAAPLGSAHRRIAIAVDLSDESAYAVSWAVANYLRPGDAVILLHVRSTNVLYGADWGSVT 412
           A A  G+  R   +  DLS ES YA+++ +   +  GD V ++H           W    
Sbjct: 202 AGAEAGN-QRSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVH-----------W---E 246

Query: 413 PTSPEDDAEVAA-----RKMEEDFDALTASKADDLAKPLEEAKIPYXIHIVKD 556
           P+ P DD+++ A     RK         A   DDL   +     PY  H++ +
Sbjct: 247 PSKPTDDSQMFANVARIRKHVMHLFDCVAGVLDDLDVVVLSLTHPYPKHLLNE 299

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 272 IAVDLSDESAYAVSWAVANYLRPGDAVILLHV 367
           + +DLS ES +A  WAV   LR GD +I++ V
Sbjct: 435 LTLDLSSESLHAAEWAVGILLRNGDTLIIVDV 466

>YGEZ_ECOLI (Q46806) Hypothetical hydrolase ygeZ (EC 3.-.-.-)|
          Length = 461

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 401 GSVTPTSPEDDAEVAARKMEEDFDALTASKADDLAKPLE 517
           G++T   PE+DA +A+++ E     LTA +   L++PLE
Sbjct: 176 GALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLE 214

>TOP6B_HALSA (Q9HR31) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 804

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 302 YAVSWAVANYLRPGDAVILLHVRSTNVLYGADWGSVTPTSPEDDAEV 442
           Y +S    + L  G AVI++HV STNV + ++        PE +AE+
Sbjct: 596 YNLSQPGGSGLPQGPAVIMVHVASTNVPFTSESKDAIANVPEIEAEI 642

>ILVC_NATPD (Q3IRQ2) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 331

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +2

Query: 236 AAPLGSAHRRIAIAVDLSDESAYAVSWAVANYLRPGDAVILLHVRSTNVLYG----ADWG 403
           A P G+A +   ++V + D    AV   + + L+PGD +   H    N+ YG    ++  
Sbjct: 67  ATPRGAAEQADLVSVLVPDTVQPAVYEQIEDVLQPGDTLQFAH--GFNIHYGQIEPSEDV 124

Query: 404 SVTPTSPEDDAEVAARKMEED 466
           +VT  +P+    +  R  E D
Sbjct: 125 NVTMVAPKSPGHLVRRNYEND 145

>OPGH_PSEPK (Q88D04) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 857

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 375 LMFYTALTGAPSPPRPPKTTLRSPRARWR 461
           +  +  +TG P+ P+PPK  L  P ARWR
Sbjct: 107 IRMWRRMTGRPNAPQPPKREL--PPARWR 133

>TOP6B_AERPE (Q9YE64) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 565

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 281 DLSDESAYAVSWAVANYLRPGDAVILLHVRSTNVLYGADWGSVTPTSPEDDAEV 442
           D+S +   +++W   N   P   V+L+H+ ST V Y           PE +AE+
Sbjct: 411 DVSYKVVSSINWRQYNVDFPAPLVVLVHIASTKVPYKGVGKESVSDVPEIEAEI 464

>USPA_PHOLL (P60004) Universal stress protein A|
          Length = 143

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 25/87 (28%), Positives = 40/87 (45%)
 Frame = +2

Query: 254 AHRRIAIAVDLSDESAYAVSWAVANYLRPGDAVILLHVRSTNVLYGADWGSVTPTSPEDD 433
           A++ I +AVDLS ES   V  AV+        V L+HV   +V Y   +  +   +  D 
Sbjct: 2   AYKHILVAVDLSPESQVLVRKAVSMAKPDNAKVSLIHV---DVNYSDLYTGLIDVNLGDM 58

Query: 434 AEVAARKMEEDFDALTASKADDLAKPL 514
            +  + +      AL+A  A D+ + L
Sbjct: 59  QQRISEETRSALKALSADSAYDIQETL 85

>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)|
          Length = 2256

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +2

Query: 392  ADWGSV-TPTSPEDDAEV--AARKMEEDFDALTASKADDLAKPLEEA 523
            AD  SV TP   +  AE   A  + EEDFD LT  + D+L+   EE+
Sbjct: 1456 ADGQSVGTPAGTDTGAEKDGAEEEEEEDFDDLTQDEEDELSSASEES 1502


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,568,879
Number of Sequences: 219361
Number of extensions: 715374
Number of successful extensions: 4407
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4405
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)