ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart36h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 335 bits (169), Expect = 9e-89 Identities = 241/265 (90%) Strand = Plus / Plus Query: 293 ggcggcggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 352 |||||||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 18857132 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 18857191 Query: 353 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 412 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 18857192 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 18857251 Query: 413 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 472 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18857252 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 18857311 Query: 473 cttcgccaagcgcaacttccccgtcgcccaggccgtcggcttctgggactaccaggcctt 532 |||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |||| Sbjct: 18857312 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 18857371 Query: 533 catcaccgccgcctccctcttcgag 557 ||||||||||||| ||||||||||| Sbjct: 18857372 catcaccgccgccgccctcttcgag 18857396
>dbj|AK103755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143D05, full insert sequence Length = 1649 Score = 335 bits (169), Expect = 9e-89 Identities = 241/265 (90%) Strand = Plus / Plus Query: 293 ggcggcggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 352 |||||||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 376 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 435 Query: 353 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 412 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 436 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 495 Query: 413 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 472 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 555 Query: 473 cttcgccaagcgcaacttccccgtcgcccaggccgtcggcttctgggactaccaggcctt 532 |||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |||| Sbjct: 556 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 615 Query: 533 catcaccgccgcctccctcttcgag 557 ||||||||||||| ||||||||||| Sbjct: 616 catcaccgccgccgccctcttcgag 640
>dbj|AK069564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019G16, full insert sequence Length = 1455 Score = 335 bits (169), Expect = 9e-89 Identities = 241/265 (90%) Strand = Plus / Plus Query: 293 ggcggcggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 352 |||||||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 159 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 218 Query: 353 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 412 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 219 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 278 Query: 413 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 472 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 338 Query: 473 cttcgccaagcgcaacttccccgtcgcccaggccgtcggcttctgggactaccaggcctt 532 |||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |||| Sbjct: 339 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 398 Query: 533 catcaccgccgcctccctcttcgag 557 ||||||||||||| ||||||||||| Sbjct: 399 catcaccgccgccgccctcttcgag 423
>gb|AY105990.1| Zea mays PCO087835 mRNA sequence Length = 1619 Score = 289 bits (146), Expect = 5e-75 Identities = 221/246 (89%) Strand = Plus / Plus Query: 312 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 371 ||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| ||||| Sbjct: 384 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 443 Query: 372 caggagaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccag 431 ||||||||| | || |||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 444 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 503 Query: 432 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 491 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 504 accatcaccgacttcttcaaggtgtacaagttcgagaacctcttcgccaagcgcaacacc 563 Query: 492 cccgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctc 551 |||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 564 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 623 Query: 552 ttcgag 557 |||||| Sbjct: 624 ttcgag 629
>emb|Z99959.1|MAZ99959 Musa acuminata mRNA for putative chitinase (clone pBAN EU41) Length = 715 Score = 174 bits (88), Expect = 2e-40 Identities = 157/180 (87%) Strand = Plus / Plus Query: 378 aaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccatc 437 ||||||||||||||||||||||||||| ||| | | |||||||||||| | |||||| Sbjct: 156 aaggtgtgcaacaaggggtgggagtgcagcggcagtatctactgctgcaacgacaccatc 215 Query: 438 accgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttccccgtc 497 | ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 216 agcgactacttcaaggtgtaccagttcgagaacctcttcagcaagcgcaactcccccgtg 275 Query: 498 gcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctcttcgag 557 || || |||||||||||||||||||||||| |||||||| ||||||||| ||| |||| Sbjct: 276 gcgcacgccgtcggcttctgggactaccagtccttcatccttgccgcctccgtctacgag 335
>ref|XM_507595.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1260 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>ref|XM_483389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1260 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>ref|XM_507594.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1262 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 200 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 259 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 260 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 319 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 320 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 379 Query: 554 cgag 557 |||| Sbjct: 380 cgag 383
>ref|XM_507298.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1272 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 25970002 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 25969943 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 25969942 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 25969883 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 25969882 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 25969823 Query: 554 cgag 557 |||| Sbjct: 25969822 cgag 25969819 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 cggtgctgctgctgggggcggcggcggtg 305 ||||||||||||| | ||||||||||||| Sbjct: 15428007 cggtgctgctgcttgtggcggcggcggtg 15427979 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggtgacggtgctgctgctg 290 |||||||||||||||||||| Sbjct: 5662526 tggtgacggtgctgctgctg 5662507
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 5563 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 5504 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 5503 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 5444 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 5443 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 5384 Query: 554 cgag 557 |||| Sbjct: 5383 cgag 5380
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 54879 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 54820 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 54819 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 54760 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 54759 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 54700 Query: 554 cgag 557 |||| Sbjct: 54699 cgag 54696
>dbj|AK106190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E01, full insert sequence Length = 1272 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>dbj|AK104718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A09, full insert sequence Length = 1260 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>dbj|AK102814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M05, full insert sequence Length = 1262 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 200 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 259 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 260 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 319 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 320 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 379 Query: 554 cgag 557 |||| Sbjct: 380 cgag 383
>dbj|AK060080.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D01, full insert sequence Length = 1260 Score = 131 bits (66), Expect = 3e-27 Identities = 155/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 377 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 436 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 437 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 493 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 494 cgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 553 ||||||| |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 554 cgag 557 |||| Sbjct: 378 cgag 381
>ref|XM_969484.1| PREDICTED: Tribolium castaneum similar to CG6154-PA, isoform A (LOC663439), mRNA Length = 2613 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 273 gtgacggtgctgctgctgggggcggcggc 301 ||||||||||||||||||| ||||||||| Sbjct: 886 gtgacggtgctgctgctggcggcggcggc 914
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 324 gcgctgatcctgacggcggggacg 347 |||||||||||||||||||||||| Sbjct: 754258 gcgctgatcctgacggcggggacg 754235 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 280 tgctgctgctgggggcggcggcggt 304 ||||||||||||| ||||||||||| Sbjct: 478345 tgctgctgctgggcgcggcggcggt 478321
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 269 cgtggtgacggtgctgctgctggg 292 |||||||||||||||||||||||| Sbjct: 2249143 cgtggtgacggtgctgctgctggg 2249120 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 gtgctgctgctgggggcggcg 299 ||||||||||||||||||||| Sbjct: 3376281 gtgctgctgctgggggcggcg 3376261
>ref|XM_322076.1| Neurospora crassa OR74A hypothetical protein (NCU09973.1) partial mRNA Length = 531 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 tgctgctgggggcggcggcggtg 305 ||||||||||||||||||||||| Sbjct: 279 tgctgctgggggcggcggcggtg 301
>ref|XM_952998.1| Neurospora crassa OR74A hypothetical protein (NCU09973.1) partial mRNA Length = 531 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 tgctgctgggggcggcggcggtg 305 ||||||||||||||||||||||| Sbjct: 279 tgctgctgggggcggcggcggtg 301
>gb|AY898625.1| Acidovorax avenae subsp. citrulli lytic murein transglycosylase, SAM-dependent methyltransferase, HrcC, HrpD5, HrpB1, HrpB2, HrcJ, HrpB4, HrpF, HrcN, hypothetical protein, GALA, HrcT, HrcU, HrcV, HpaP, HrcQ, HrcR, HrcS, HpaA, HpaB, HrpG, HrpX, and chorismate mutase genes, complete cds; anthranilate para-aminobenzoate synthase component I gene, partial cds; and unknown genes Length = 36584 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 gacggtgctgctgctgggggcg 296 |||||||||||||||||||||| Sbjct: 23955 gacggtgctgctgctgggggcg 23934
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 ggtgctgctgctgggggcggcggcgg 303 |||||||||||||| ||||||||||| Sbjct: 144690 ggtgctgctgctggtggcggcggcgg 144715
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ggcacgctggcgctgatcctg 335 ||||||||||||||||||||| Sbjct: 3564961 ggcacgctggcgctgatcctg 3564941
>ref|XM_481774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3645 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 277 cggtgctgctgctgggggcggcggcggtg 305 ||||||||||||| | ||||||||||||| Sbjct: 35 cggtgctgctgcttgtggcggcggcggtg 63
>ref|NM_001030552.1| Gallus gallus ClpX caseinolytic peptidase X homolog (E. coli) (CLPX), mRNA Length = 3757 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 aggagaaggtgtgcaacaagg 393 ||||||||||||||||||||| Sbjct: 1202 aggagaaggtgtgcaacaagg 1222
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 agatcgtggtgacggtgctgc 285 ||||||||||||||||||||| Sbjct: 141361 agatcgtggtgacggtgctgc 141341
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 caccgaagcaatccagatcga 85 ||||||||||||||||||||| Sbjct: 5374622 caccgaagcaatccagatcga 5374642
>ref|XM_858569.1| PREDICTED: Canis familiaris similar to K06H7.3, transcript variant 3 (LOC478916), mRNA Length = 2030 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 ggtgctgctgctgggggcggcggcg 302 ||||| ||||||||||||||||||| Sbjct: 67 ggtgcagctgctgggggcggcggcg 91
>ref|XM_536075.2| PREDICTED: Canis familiaris similar to K06H7.3, transcript variant 1 (LOC478916), mRNA Length = 2525 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 ggtgctgctgctgggggcggcggcg 302 ||||| ||||||||||||||||||| Sbjct: 49 ggtgcagctgctgggggcggcggcg 73
>emb|CR733868.2|CNS0GT17 Tetraodon nigroviridis full-length cDNA Length = 1858 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 326 atcgtggtgacggcgctgctgctgg 350
>emb|CR731321.2|CNS0GR8E Tetraodon nigroviridis full-length cDNA Length = 1797 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 306 atcgtggtgacggcgctgctgctgg 330
>emb|CR724189.2|CNS0GLQB Tetraodon nigroviridis full-length cDNA Length = 1981 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR701279.2|CNS0G423 Tetraodon nigroviridis full-length cDNA Length = 1312 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 317 atcgtggtgacggcgctgctgctgg 341
>emb|CR699265.2|CNS0G2I5 Tetraodon nigroviridis full-length cDNA Length = 1505 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 328 atcgtggtgacggcgctgctgctgg 352
>ref|XM_536224.2| PREDICTED: Canis familiaris similar to Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 (LOC479077), mRNA Length = 4109 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gtggtgacggtgctgctgctg 290 ||||||||||||||||||||| Sbjct: 448 gtggtgacggtgctgctgctg 468
>emb|CR681381.2|CNS0FOPD Tetraodon nigroviridis full-length cDNA Length = 2078 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 318 atcgtggtgacggcgctgctgctgg 342
>emb|CR676740.2|CNS0FL4W Tetraodon nigroviridis full-length cDNA Length = 1566 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 160 atcgtggtgacggcgctgctgctgg 184
>emb|CR665561.2|CNS0FCIN Tetraodon nigroviridis full-length cDNA Length = 2027 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 331 atcgtggtgacggcgctgctgctgg 355
>emb|CR662594.2|CNS0FA88 Tetraodon nigroviridis full-length cDNA Length = 2092 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR659457.2|CNS0F7T3 Tetraodon nigroviridis full-length cDNA Length = 1930 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR657849.2|CNS0F6KF Tetraodon nigroviridis full-length cDNA Length = 2085 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 atcgtggtgacggtgctgctgctgg 291 ||||||||||||| ||||||||||| Sbjct: 324 atcgtggtgacggcgctgctgctgg 348
>gb|AE008696.1| Salmonella typhimurium LT2, section 4 of 220 of the complete genome Length = 22039 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggcg 302 ||||||||||||||||||||| Sbjct: 922 ctgctgctgggggcggcggcg 902
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 acggtgctgctgctgggggcggcgg 300 ||||||||||||| ||||||||||| Sbjct: 9146 acggtgctgctgcggggggcggcgg 9170
>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23, complete sequence Length = 169760 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 tcatcaccgccgcctccctct 552 ||||||||||||||||||||| Sbjct: 153828 tcatcaccgccgcctccctct 153848
>emb|AJ719607.1| Gallus gallus mRNA for hypothetical protein, clone 4h24 Length = 3757 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 aggagaaggtgtgcaacaagg 393 ||||||||||||||||||||| Sbjct: 1202 aggagaaggtgtgcaacaagg 1222
>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: K1 Length = 45779 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 gacggtgctgctgctgggggc 295 ||||||||||||||||||||| Sbjct: 26450 gacggtgctgctgctgggggc 26430
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 ggcgctgatcctgacggcggggacg 347 |||||||| |||||||||||||||| Sbjct: 3835719 ggcgctgaccctgacggcggggacg 3835695 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 gctgctgggggcggcggcggtgctg 308 |||||||||||||| |||||||||| Sbjct: 2293249 gctgctgggggcggaggcggtgctg 2293225
>ref|NM_204353.1| Gallus gallus insulin-like growth factor binding protein 4 (IGFBP4), mRNA Length = 1809 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 gtgctgctgctgggggcggcggcgg 303 ||||||||||||| ||||||||||| Sbjct: 56 gtgctgctgctggcggcggcggcgg 80
>gb|AF111945.1|AF111945 Rhodobacter sphaeroides strain 2.4.1T quinol oxidase subunit II (qoxB) and quinol oxidase subunit I (qoxA) genes, complete cds Length = 3462 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 agatcgtggtgacggtgctgc 285 ||||||||||||||||||||| Sbjct: 1336 agatcgtggtgacggtgctgc 1356
>gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, complete sequence Length = 201464 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gacggtgctgctgctgggggc 295 ||||||||||||||||||||| Sbjct: 148612 gacggtgctgctgctgggggc 148632
>gb|AY230206.1| Gallus gallus insulin-like growth factor-binding protein-4 mRNA, complete cds Length = 1809 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 gtgctgctgctgggggcggcggcgg 303 ||||||||||||| ||||||||||| Sbjct: 56 gtgctgctgctggcggcggcggcgg 80
>dbj|AB192413.1| Gallus gallus IGFBP4 gene for insulin-like growth factor binding protein-4, complete cds Length = 5927 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 gtgctgctgctgggggcggcggcgg 303 ||||||||||||| ||||||||||| Sbjct: 716 gtgctgctgctggcggcggcggcgg 740
>gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, complete sequence Length = 40590 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcggtgctg 308 |||||||||||| ||||||||||| |||| Sbjct: 33444 tgctgctgctggcggcggcggcggcgctg 33472
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 cggtgctgctgctgggggcggcggcggtg 305 ||||||||||||| | ||||||||||||| Sbjct: 113583 cggtgctgctgcttgtggcggcggcggtg 113555
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggcg 302 ||||||||||||||||||||| Sbjct: 3474297 ctgctgctgggggcggcggcg 3474277 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ctgctgctgggggcggcggcg 302 ||||||||||||||||||||| Sbjct: 861034 ctgctgctgggggcggcggcg 861054 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggcg 302 ||||||||||||||||||||| Sbjct: 58626 ctgctgctgggggcggcggcg 58606
>gb|M26290.1|KPNOADBG2 K.pneumoniae oxaloacetate decarboxylase beta-chain gene (oadB) gene, complete cds Length = 1438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ctgctgctgggggcggcggcg 302 ||||||||||||||||||||| Sbjct: 496 ctgctgctgggggcggcggcg 516
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gcggcacgctggcgctgatcctga 336 ||||||||||||| |||||||||| Sbjct: 478838 gcggcacgctggccctgatcctga 478815
>ref|NM_001003162.1| Canis familiaris integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) (ITGB3), mRNA Length = 2374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cggtgctgctgctgggggcg 296 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0076F20.5), mRNA Length = 3478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 tgctgctgctgggggcggcggcgg 303 |||||||||||| ||||||||||| Sbjct: 1368 tgctgctgctggtggcggcggcgg 1345
>ref|NM_191079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1662 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctgctgctgggggcggcggcggt 304 ||||||||||| |||||||||||| Sbjct: 27 gctgctgctggtggcggcggcggt 50
>gb|AC170424.1| Rhesus Macaque BAC CH250-53N5 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 175619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gtgtgcaacaaggggtggga 400 |||||||||||||||||||| Sbjct: 105887 gtgtgcaacaaggggtggga 105868
>ref|XM_514021.1| PREDICTED: Pan troglodytes LOC457544 (LOC457544), mRNA Length = 6621 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 1038 ctgctgctgggggccggcggcggtgctg 1065
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aatccagatcgagcaccccgagct 97 |||||||||||| ||||||||||| Sbjct: 3756468 aatccagatcgaacaccccgagct 3756445
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 atcgtggtgacggtgctgctgctg 290 |||||| ||||||||||||||||| Sbjct: 1832487 atcgtgctgacggtgctgctgctg 1832464
>gb|AY390355.1| Triticum aestivum ammonium transporter (AMT1) mRNA, complete cds Length = 1852 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctgctgggggcggcggcgg 303 |||||||||||||||||||| Sbjct: 77 gctgctgggggcggcggcgg 96
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tgacggtgctgctgctgggggcgg 297 |||||| ||||||||||||||||| Sbjct: 29741 tgacggagctgctgctgggggcgg 29718
>ref|XM_369372.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06092.4) partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 taggcggcacgctggcgctg 329 |||||||||||||||||||| Sbjct: 374 taggcggcacgctggcgctg 355
>ref|XM_960596.1| Neurospora crassa OR74A hypothetical protein (NCU02558.1) partial mRNA Length = 1881 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggtgacggtgctgctgctg 290 |||||||||||||||||||| Sbjct: 959 tggtgacggtgctgctgctg 940
>ref|XM_331756.1| Neurospora crassa OR74A hypothetical protein (NCU02558.1) partial mRNA Length = 1881 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggtgacggtgctgctgctg 290 |||||||||||||||||||| Sbjct: 959 tggtgacggtgctgctgctg 940
>ref|NM_207108.1| Homo sapiens astrotactin (ASTN), transcript variant 2, mRNA Length = 3914 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 245 ctgctgctgggggccggcggcggtgctg 272
>ref|NM_004319.1| Homo sapiens astrotactin (ASTN), transcript variant 1, mRNA Length = 7331 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 245 ctgctgctgggggccggcggcggtgctg 272
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 atcgtggtgacggtgctgctgctg 290 |||||| ||||||||||||||||| Sbjct: 3073356 atcgtgctgacggtgctgctgctg 3073333
>gb|AE009108.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 134 of 256 of the complete sequence Length = 11709 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 318 acgctggcgctgatcctgacggcgggga 345 |||||||||||||||| | ||||||||| Sbjct: 3084 acgctggcgctgatccgggcggcgggga 3057
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ctgctgggggcggcggcggtgctg 308 ||||||||||||| |||||||||| Sbjct: 398596 ctgctgggggcgggggcggtgctg 398573
>ref|NM_001031686.1| Homo sapiens zinc finger protein 205 (ZNF205), transcript variant 1, mRNA Length = 2033 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1764 tgctgatgctgggggcggcggcgg 1787
>ref|NM_003456.1| Homo sapiens zinc finger protein 205 (ZNF205), transcript variant 2, mRNA Length = 2041 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1764 tgctgatgctgggggcggcggcgg 1787
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 aacaagatcgtggtgacggt 280 |||||||||||||||||||| Sbjct: 79668 aacaagatcgtggtgacggt 79649
>ref|XM_533732.2| PREDICTED: Canis familiaris similar to plexin D1 (LOC476526), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcg 299 |||||||||||||||||||| Sbjct: 119 tgctgctgctgggggcggcg 138
>ref|XM_386423.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06247.1) partial mRNA Length = 1653 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcggtgctgataggcggcacgctg 323 |||||||||| ||||||||||||| Sbjct: 567 gcggtgctgagaggcggcacgctg 544
>ref|XM_843937.1| PREDICTED: Canis familiaris hypothetical LOC55248, transcript variant 1 (LOC612794), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 accagaccatcaccgacttc 446 |||||||||||||||||||| Sbjct: 274 accagaccatcaccgacttc 293
>ref|XM_852593.1| PREDICTED: Canis familiaris hypothetical LOC55248, transcript variant 2 (LOC612794), mRNA Length = 862 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 accagaccatcaccgacttc 446 |||||||||||||||||||| Sbjct: 274 accagaccatcaccgacttc 293
>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence Length = 156399 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ggaaggtgaagctcaaggag 368 |||||||||||||||||||| Sbjct: 117332 ggaaggtgaagctcaaggag 117351
>gb|BC002810.2| Homo sapiens zinc finger protein 205, mRNA (cDNA clone MGC:3772 IMAGE:3635500), complete cds Length = 2033 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1764 tgctgatgctgggggcggcggcgg 1787
>gb|BC049377.1| Homo sapiens astrotactin, mRNA (cDNA clone IMAGE:5284415), containing frame-shift errors Length = 4203 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 226 ctgctgctgggggccggcggcggtgctg 253
>emb|AL021398.1|HS964D12 Human DNA sequence from clone RP5-964D12 on chromosome 1q24-25 Contains the 5' end of the ASTN gene for astrotactin and the 5' end of the gene for a novel protein (KIAA1747, LOC57795), complete sequence Length = 146963 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 58375 ctgctgctgggggccggcggcggtgctg 58402
>gb|BT009318.1| Triticum aestivum clone wlm12.pk0020.b10:fis, full insert mRNA sequence Length = 1991 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctgctgggggcggcggcgg 303 |||||||||||||||||||| Sbjct: 103 gctgctgggggcggcggcgg 122
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 atcgtggtgacggtgctgctgctg 290 |||||| ||||||||||||||||| Sbjct: 2803432 atcgtgctgacggtgctgctgctg 2803409
>gb|BC032870.1| Homo sapiens astrotactin, mRNA (cDNA clone IMAGE:5259902), containing frame-shift errors Length = 4207 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 230 ctgctgctgggggccggcggcggtgctg 257
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggc 301 |||||||||||||||||||| Sbjct: 167166 ctgctgctgggggcggcggc 167147
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggc 301 |||||||||||||||||||| Sbjct: 64369 ctgctgctgggggcggcggc 64350
>emb|AJ496544.2|VAN496544 Listonella anguillarum serovar 01 haem uptake cluster (huvA, huvZ, huvX, tonB, exbB, exbD, huvB, huvC and huvD genes) Length = 9690 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 gctgctgctgggggcggcggcggt 304 ||||||||| |||||||||||||| Sbjct: 4533 gctgctgcttggggcggcggcggt 4510
>gb|BT007718.1| Synthetic construct Homo sapiens zinc finger protein 205 mRNA, partial cds Length = 1665 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1604 tgctgatgctgggggcggcggcgg 1627
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 280 tgctgctgctgggggcggcggcggtgctgataggcggcac 319 |||||||| |||| || ||||||||||||| |||||||| Sbjct: 3169270 tgctgctggtgggcgccccggcggtgctgatgggcggcac 3169231
>emb|CR859529.1| Pongo pygmaeus mRNA; cDNA DKFZp459C1639 (from clone DKFZp459C1639) Length = 2453 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggtgctgctgctgggggcgg 297 |||||||||||||||||||| Sbjct: 98 ggtgctgctgctgggggcgg 79
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 acggtgctgctgctgggggc 295 |||||||||||||||||||| Sbjct: 29258 acggtgctgctgctgggggc 29239
>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete sequence Length = 261927 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gagtcgcaggagaaggtgtg 385 |||||||||||||||||||| Sbjct: 34350 gagtcgcaggagaaggtgtg 34369
>gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169705 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ggtgctgctgctgggggcggcggcggtg 305 |||| ||||||||| ||||||||||||| Sbjct: 28602 ggtggtgctgctggcggcggcggcggtg 28629
>emb|CR623188.1| full-length cDNA clone CS0DK010YB08 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1895 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1676 tgctgatgctgggggcggcggcgg 1699
>ref|NM_168667.1| Drosophila melanogaster CG32159-RB (CG32159), mRNA Length = 3493 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 ggtgctgctgctgggggcggcggcggtg 305 |||| ||||||||| ||||||||||||| Sbjct: 1388 ggtggtgctgctggcggcggcggcggtg 1361
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 318 acgctggcgctgatcctgacggcgggga 345 |||||||||||||||| | ||||||||| Sbjct: 1479774 acgctggcgctgatccgggcggcgggga 1479747
>gb|AY071185.1| Drosophila melanogaster RE23490 full length cDNA Length = 3508 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 ggtgctgctgctgggggcggcggcggtg 305 |||| ||||||||| ||||||||||||| Sbjct: 1388 ggtggtgctgctggcggcggcggcggtg 1361
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 |||||||||||| ||||||||||| Sbjct: 39953 tgctgctgctggtggcggcggcgg 39976
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 |||||||||||| ||||||||||| Sbjct: 19412087 tgctgctgctggtggcggcggcgg 19412110
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctgctgctgggggcggcggcggt 304 ||||||||||| |||||||||||| Sbjct: 34740327 gctgctgctggtggcggcggcggt 34740350
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence Length = 180354 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 131788 tgctgatgctgggggcggcggcgg 131811
>gb|AC009238.4| Homo sapiens BAC clone RP11-468G5 from 2, complete sequence Length = 202361 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ggaaggtgaagctcaaggag 368 |||||||||||||||||||| Sbjct: 86706 ggaaggtgaagctcaaggag 86725
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctgctgctgggggcggcggcggt 304 ||||||||||| |||||||||||| Sbjct: 55567 gctgctgctggtggcggcggcggt 55590
>gb|AY892140.1| Synthetic construct Homo sapiens clone FLH012624.01L zinc finger protein 205 (ZNF205) mRNA, partial cds Length = 1665 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1604 tgctgatgctgggggcggcggcgg 1627
>gb|AY892139.1| Synthetic construct Homo sapiens clone FLH012623.01L zinc finger protein 205 (ZNF205) mRNA, partial cds Length = 1665 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1604 tgctgatgctgggggcggcggcgg 1627
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggtgacggtgctgctgctg 290 |||||||||||||||||||| Sbjct: 117902 tggtgacggtgctgctgctg 117883
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tggtgacggtgctgctgctg 290 |||||||||||||||||||| Sbjct: 17151 tggtgacggtgctgctgctg 17132
>ref|XM_316488.2| Anopheles gambiae str. PEST ENSANGP00000025112 (ENSANGG00000021508), partial mRNA Length = 1291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ggtgacggtgctgctgctgg 291 |||||||||||||||||||| Sbjct: 415 ggtgacggtgctgctgctgg 434
>ref|XM_311909.2| Anopheles gambiae str. PEST ENSANGP00000010912 (ENSANGG00000008423), partial mRNA Length = 7578 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcg 299 |||||||||||||||||||| Sbjct: 4833 tgctgctgctgggggcggcg 4852
>dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E13, full insert sequence Length = 2451 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gctgctgctgggggcggcggcggt 304 ||||||||||| |||||||||||| Sbjct: 210 gctgctgctggtggcggcggcggt 233
>gb|AF116270.1|AF116270 Canis familiaris platelet glycoprotein IIIa (GPIIIa) mRNA, complete cds Length = 2355 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cggtgctgctgctgggggcg 296 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>gb|AF170525.1|AF170525 Canis familiaris glycoprotein GPIIIa (GPIIIa) mRNA, complete cds Length = 2374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cggtgctgctgctgggggcg 296 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggc 301 |||||||||||||||||||| Sbjct: 3358660 ctgctgctgggggcggcggc 3358641 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctgctgctgggggcggcggc 301 |||||||||||||||||||| Sbjct: 64369 ctgctgctgggggcggcggc 64350
>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete sequence Length = 279904 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ggtgctgctgctgggggcggcggcggtg 305 |||| ||||||||| ||||||||||||| Sbjct: 146368 ggtggtgctgctggcggcggcggcggtg 146395
>gb|AF060865.1|AF060865 Homo sapiens chromosome 16 zinc finger protein ZNF210 (ZNF210) mRNA, complete cds Length = 2041 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 1764 tgctgatgctgggggcggcggcgg 1787
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cggcacgctggcgctgatcc 333 |||||||||||||||||||| Sbjct: 3185396 cggcacgctggcgctgatcc 3185377
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cggtgctgctgctgggggcggcggcggt 304 |||||| ||||||||||| ||||||||| Sbjct: 3359026 cggtgcagctgctgggggtggcggcggt 3358999
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 |||||||||||| ||||||||||| Sbjct: 19423363 tgctgctgctggtggcggcggcgg 19423386
>gb|AF026065.1|AF026065 Ralstonia sp. E2 positive phenol-degradative gene regulator (poxR), phenol hydroxylase components (poxA, poxB, poxC, poxD, poxE, poxF), and ferredoxin-like protein (poxG) genes, complete cds Length = 9511 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gtgacggtgctgctgctggg 292 |||||||||||||||||||| Sbjct: 2788 gtgacggtgctgctgctggg 2807
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tgctgctgctgggggcggcggcgg 303 ||||| |||||||||||||||||| Sbjct: 79486 tgctgatgctgggggcggcggcgg 79509
>gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gaaggtgaagctcaaggagt 369 |||||||||||||||||||| Sbjct: 36436 gaaggtgaagctcaaggagt 36417
>dbj|AB006627.1| Homo sapiens mRNA for KIAA0289 gene, partial cds Length = 7127 Score = 40.1 bits (20), Expect = 7.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 282 ctgctgctgggggc-ggcggcggtgctg 308 |||||||||||||| ||||||||||||| Sbjct: 59 ctgctgctgggggccggcggcggtgctg 86 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,085,490 Number of Sequences: 3902068 Number of extensions: 4085490 Number of successful extensions: 90803 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 88832 Number of HSP's gapped (non-prelim): 1971 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
