>YIQ1_YEAST (P40449) Hypothetical 27.1 kDa protein in SUC2-FOX3 intergenic|
           region
          Length = 235

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = +1

Query: 7   KLRPPNPQRKSSQV--KTNTLRFSREEDMEERRNDSQRQE 120
           K +  N +RK++    K NTL +S+E ++EER+  ++RQE
Sbjct: 74  KSQAKNRRRKNNNGANKKNTLHYSKEINVEERKQIAKRQE 113

>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1)
          Length = 765

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 7   KLRPPNPQRKSSQVKTNTLRFSREEDMEERRNDSQRQE 120
           KLR PNP  KSS+    +   S E+D EE  +D + +E
Sbjct: 658 KLRGPNP--KSSRTTLQSKSESEEDDDEEEEDDEEEEE 693

>CHLD_TOBAC (O24133) Magnesium-chelatase subunit chlD, chloroplast precursor|
           (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase)
           (Mg-chelatase subunit D)
          Length = 758

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
 Frame = +1

Query: 16  PPNPQRKSSQVKTNTLRFSREEDME-ERRNDSQRQEPTVARAXXXXXXXXXXXXEFEF-- 186
           PP PQ + S  + N      EED E E+  ++++Q+P V               +  F  
Sbjct: 413 PPPPQNQDSSEEQNEEEEKEEEDQEDEKDRENEQQQPQVPDEFIFDAEGGLVDEKLLFFA 472

Query: 187 SFGSREPATGGAAADELFADGR---IRPFYP 270
               R     G A   +F++ R   I+P  P
Sbjct: 473 QQAQRRKGKAGRAKKVIFSEDRGRYIKPMLP 503

>DNAJ1_COREF (Q8FNF5) Chaperone protein dnaJ 1|
          Length = 378

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 193 GSREPATGGAAADELFADGRIRPFYPVFGRVFNDAHAPGRRPL 321
           G  E   GG  A +L+ +  +RP + VF R  +D HA  R P+
Sbjct: 232 GQGEVGAGGGPAGDLYVEVMVRP-HAVFTRDGDDLHASIRVPM 273

>QUEA_SYMTH (Q67Q93) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 341

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
 Frame = -2

Query: 288 EDPPEHRVER------PDAPVGEELVGRGTARGRLPAXXXXXXXXXXXXXGNRGTVRPGD 127
           EDP +H++        P+A  G   V +G   GRL A                GTVRPG+
Sbjct: 217 EDPTQHKMHSEFYHVSPEAAAGINAVRKGG--GRLVAVGTTSVRTLETVADEDGTVRPGE 274

>CYTSA_RAT (Q2KN99) Cytospin-A|
          Length = 1118

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KTNTLRFSREEDMEERRNDSQRQEPTVAR 135
           K  TL  S +ED+   RND+ R + T+A+
Sbjct: 619 KAETLASSLQEDLAHTRNDANRLQDTIAK 647

>CYTSA_MOUSE (Q2KN98) Cytospin-A|
          Length = 1118

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KTNTLRFSREEDMEERRNDSQRQEPTVAR 135
           K  TL  S +ED+   RND+ R + T+A+
Sbjct: 619 KAETLASSLQEDLAHTRNDANRLQDTIAK 647

>CYTSA_CANFA (Q2KNA0) Cytospin-A|
          Length = 1117

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KTNTLRFSREEDMEERRNDSQRQEPTVAR 135
           K  TL  S +ED+   RND+ R + T+A+
Sbjct: 618 KAETLASSLQEDLAHTRNDANRLQDTIAK 646

>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)|
          Length = 654

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 8   SFAPQIRKENQVKSRQTHYVSAEKKTWRSGAMTANARNPRSPGRTV 145
           S +  + + N  K+R+   +S +  +W +G ++ N R P SPG  V
Sbjct: 521 SSSDSLEEVNAGKNRRPLSISID--SWNTGTLSGNYRRPPSPGEYV 564

>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm|
           protein Spag-1) (HSD-3.8)
          Length = 893

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   RAKLRPPNPQRKSSQVKTNTLRFSREEDMEERR-NDSQRQEPTVARAXXXXXXXXXXXXE 177
           RA+   P  +++  Q +T T   S   D+EERR  DS     +                +
Sbjct: 392 RARTPMPGAEQQEGQPETGTASTSDNHDLEERRAADSPGDLKSRGNELFRGGQFAEAAVQ 451

Query: 178 FEFSFGSREPATGGAAADEL 237
           +  +    EP TG   ADEL
Sbjct: 452 YSGAIAQLEP-TGSENADEL 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,748,231
Number of Sequences: 219361
Number of extensions: 571697
Number of successful extensions: 1889
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1886
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)