ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart36g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccagg 155 |||||||||| |||||| ||||||||||||||||||||||| |||||||||||| | | Sbjct: 38 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgggcgcg 97 Query: 156 cgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 |||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 98 cgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 143 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||| ||| ||| | ||||||||||||| || ||||| |||||||||||| ||||| Sbjct: 377 cggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagc 436 Query: 468 tcgcgcaccc 477 |||||||||| Sbjct: 437 tcgcgcaccc 446
>dbj|AK063434.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E03, full insert sequence Length = 1916 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggc 151 |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 85 gagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcggc 144 Query: 152 caggcgatcgtggaggagct 171 | || ||||| |||||||| Sbjct: 145 cgcgccatcgtcgaggagct 164 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 gtcaccgtctccgtctgcgacgtctc 288 ||||||||||||||||| |||||||| Sbjct: 256 gtcaccgtctccgtctgtgacgtctc 281 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 333 tcttcggcggcaagctcgacatactggtgaac 364 ||||||||||||||||| ||| ||||||||| Sbjct: 326 tcttcggcggcaagctcagcatcctggtgaac 357
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 65981 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 65922 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 65921 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 65862 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 65861 gtctgcgacgtctcc 65847 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66113 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 66059 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 65707 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 65659
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 28883 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 28824 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 28823 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 28764 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 28763 gtctgcgacgtctcc 28749 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29021 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 28967 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 28609 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 28561
>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0051D10, complete sequence Length = 140272 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 43872 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 43931 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 43932 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 43991 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 43992 gtctgcgacgtctcc 44006 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43734 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 43788 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 44146 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 44194
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 25301870 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 25301811 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 25301810 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 25301751 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 25301750 gtctgcgacgtctcc 25301736 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 25190711 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 25190652 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 25190651 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 25190592 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 25190591 gtctgcgacgtctcc 25190577 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25302008 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 25301954 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25190843 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 25190789 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 13752751 gagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcgg 13752809 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 90 aggagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcg 149 |||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 13790371 aggaaaggtggagccttgccggcgccaccgcgctcgtcaccggcggtagcaaaggcatcg 13790430 Query: 150 g 150 | Sbjct: 13790431 g 13790431 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| ||| |||||||| || ||||| ||||||||| |||||||||||||||| Sbjct: 13725139 gagaggtggatcctcgccggcgccaccgcgctagtcaccggccgcagcaaaggcatcgg 13725197 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 101 agcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 ||||| ||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 14082897 agcctcgccggtgccacggcgcttgtcaccggtggcagcaaaggcatcgg 14082946 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 247 ggccaaggggctcccggtcaccgtctccgtctgcgacgt 285 ||||||||| ||| | ||||||||||||||||||||||| Sbjct: 14083156 ggccaagggcctcgccgtcaccgtctccgtctgcgacgt 14083194 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 25301596 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 25301548 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 25190437 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 25190389 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gagtcgtgcttccacctcagccagct 468 ||||||||||||||||| |||||||| Sbjct: 14083467 gagtcgtgcttccacctgagccagct 14083492 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 gtcaccgtctccgtctgcgacgtctc 288 ||||||||||||||||| |||||||| Sbjct: 13753034 gtcaccgtctccgtctgtgacgtctc 13753059
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 25620540 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 25620481 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 25620480 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 25620421 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 25620420 gtctgcgacgtctcc 25620406 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgccaggagcgcg 214 ||||| ||||||||||| || || ||||||||| ||||||||||||||| ||| |||| Sbjct: 25509369 gcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcg 25509310 Query: 215 gcggagctggaggagtgccgccgccggtgggaggccaaggggctcccggtcaccgtctcc 274 ||||||||||||| | |||| || |||||||||| |||||||| ||||||| | || Sbjct: 25509309 gcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccacc 25509250 Query: 275 gtctgcgacgtctcc 289 ||||||||||||||| Sbjct: 25509249 gtctgcgacgtctcc 25509235 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25620678 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 25620624 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25509501 ggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 25509447 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 13834749 gagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcgg 13834807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 90 aggagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcg 149 |||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 13872373 aggaaaggtggagccttgccggcgccaccgcgctcgtcaccggcggtagcaaaggcatcg 13872432 Query: 150 g 150 | Sbjct: 13872433 g 13872433 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| ||| |||||||| || ||||| ||||||||| |||||||||||||||| Sbjct: 13807137 gagaggtggatcctcgccggcgccaccgcgctagtcaccggccgcagcaaaggcatcgg 13807195 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 101 agcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 ||||| ||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 14164899 agcctcgccggtgccacggcgcttgtcaccggtggcagcaaaggcatcgg 14164948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 247 ggccaaggggctcccggtcaccgtctccgtctgcgacgt 285 ||||||||| ||| | ||||||||||||||||||||||| Sbjct: 14165158 ggccaagggcctcgccgtcaccgtctccgtctgcgacgt 14165196 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 25620266 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 25620218 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 429 tggcgaccaatctagagtcgtgcttccacctcagccagctcgcgcaccc 477 |||| ||||| || ||||| |||||||||||| ||||||||||||||| Sbjct: 25509095 tggccaccaacctcgagtcctgcttccacctctcccagctcgcgcaccc 25509047 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gagtcgtgcttccacctcagccagct 468 ||||||||||||||||| |||||||| Sbjct: 14165469 gagtcgtgcttccacctgagccagct 14165494 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 gtcaccgtctccgtctgcgacgtctc 288 ||||||||||||||||| |||||||| Sbjct: 13835032 gtcaccgtctccgtctgtgacgtctc 13835057
>ref|NM_190020.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 834 Score = 99.6 bits (50), Expect = 9e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccagg 155 |||||||||| |||||| ||||||||||||||||||||||| ||| |||||||| | | Sbjct: 26 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaagggcatcgggcgcg 85 Query: 156 cgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 |||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 86 cgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 131 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||||||| ||| ||||||||| ||||| || ||||| |||||||||||| ||||| Sbjct: 356 cggaggagtacgcgcgcctcatggccaccaacctcgagtcctgcttccacctcgcccagc 415 Query: 468 tcgcgcacc 476 ||||||||| Sbjct: 416 tcgcgcacc 424
>dbj|AK073524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I10, full insert sequence Length = 1143 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggc 151 |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 86 gagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcggc 145 Query: 152 c 152 | Sbjct: 146 c 146 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 gtcaccgtctccgtctgcgacgtctc 288 ||||||||||||||||| |||||||| Sbjct: 257 gtcaccgtctccgtctgtgacgtctc 282 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 333 tcttcggcggcaagctcgacatactggtgaac 364 ||||||||||||||||| ||| ||||||||| Sbjct: 327 tcttcggcggcaagctcagcatcctggtgaac 358
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 110560 gagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcgg 110618 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| ||| |||||||| || ||||| ||||||||| |||||||||||||||| Sbjct: 82948 gagaggtggatcctcgccggcgccaccgcgctagtcaccggccgcagcaaaggcatcgg 83006 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 gtcaccgtctccgtctgcgacgtctc 288 ||||||||||||||||| |||||||| Sbjct: 110843 gtcaccgtctccgtctgtgacgtctc 110868
>dbj|AK073048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C03, full insert sequence Length = 3157 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 92 gagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggc 151 |||||||||| ||| |||||||| || ||||| ||||||||| ||||||||||||||||| Sbjct: 2736 gagaggtggatcctcgccggcgccaccgcgctagtcaccggccgcagcaaaggcatcggc 2795 Query: 152 caggcgatcgtggaggagct 171 | || |||||||||||||| Sbjct: 2796 cgcgccatcgtggaggagct 2815
>ref|XM_471478.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccagg 155 |||||||||| |||||||| || || ||||||||||||||||||||||| ||||| | | Sbjct: 35 ggtggagcctcgccggcgccacagctctcgtcaccggcggcagcaaaggaatcgggcgag 94 Query: 156 cgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtgcgcc 205 | |||||||||||| ||||| | ||| ||| |||||||||||||||| Sbjct: 95 ccatcgtggaggagttggcgagcttcggcgcgacggtgcacacgtgcgcc 144 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ctagagtcgtgcttccacctcagccagct 468 |||||||| ||||||||||| |||||||| Sbjct: 379 ctagagtcatgcttccacctaagccagct 407 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 335 ttcggcggcaagctcgacatactggtgaacaa 366 |||| ||||||||||||||| || |||||||| Sbjct: 274 ttcgacggcaagctcgacatccttgtgaacaa 305
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 90 aggagaggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcg 149 |||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 27930 aggaaaggtggagccttgccggcgccaccgcgctcgtcaccggcggtagcaaaggcatcg 27989 Query: 150 g 150 | Sbjct: 27990 g 27990
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 40841622 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgg 40841676 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||||||| ||| ||||||||| ||||| || ||||| |||||||||||| ||||| Sbjct: 40844828 cggaggagtacgcgcgcctcatggccaccaacctcgagtcctgcttccacctcgcccagc 40844887 Query: 468 tcgcgcacc 476 ||||||||| Sbjct: 40844888 tcgcgcacc 40844896 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| ||| |||||||| Sbjct: 40844410 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaagggcatcgg 40844464 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||| ||| ||| | ||||||||||||| || ||||| |||||||||||| ||||| Sbjct: 40842087 cggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagc 40842146 Query: 468 tcgcgcaccc 477 |||||||||| Sbjct: 40842147 tcgcgcaccc 40842156 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 40844557 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 40844603 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 40841807 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 40841853
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 144268 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgg 144322 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||||||| ||| ||||||||| ||||| || ||||| |||||||||||| ||||| Sbjct: 147474 cggaggagtacgcgcgcctcatggccaccaacctcgagtcctgcttccacctcgcccagc 147533 Query: 468 tcgcgcacc 476 ||||||||| Sbjct: 147534 tcgcgcacc 147542 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| ||| |||||||| Sbjct: 147056 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaagggcatcgg 147110 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||| ||| ||| | ||||||||||||| || ||||| |||||||||||| ||||| Sbjct: 144733 cggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagc 144792 Query: 468 tcgcgcaccc 477 |||||||||| Sbjct: 144793 tcgcgcaccc 144802 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 147203 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 147249 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 144453 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 144499
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 53728 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgg 53782 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||||||| ||| ||||||||| ||||| || ||||| |||||||||||| ||||| Sbjct: 56934 cggaggagtacgcgcgcctcatggccaccaacctcgagtcctgcttccacctcgcccagc 56993 Query: 468 tcgcgcacc 476 ||||||||| Sbjct: 56994 tcgcgcacc 57002 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||| ||||||||||||||||||||||| ||| |||||||| Sbjct: 56516 ggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaagggcatcgg 56570 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 408 cggaggagtactcgcacctcatggcgaccaatctagagtcgtgcttccacctcagccagc 467 ||||||| ||| ||| | ||||||||||||| || ||||| |||||||||||| ||||| Sbjct: 54193 cggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagc 54252 Query: 468 tcgcgcaccc 477 |||||||||| Sbjct: 54253 tcgcgcaccc 54262 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 56663 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 56709 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 155 gcgatcgtggaggagctggcggggcacggggcgcgggtgcacacgtg 201 ||||||||||||||||| || ||| ||||| | ||||||||||||| Sbjct: 53913 gcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtg 53959
>dbj|AK108232.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G04, full insert sequence Length = 1118 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 101 agcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccaggcgatc 160 ||||| ||||| || |||||||| |||||||| ||||||||||||||||||| || ||| Sbjct: 87 agcctcgccggtgccacggcgcttgtcaccggtggcagcaaaggcatcggccgcgccatc 146 Query: 161 gtggaggagctggcg 175 ||||| ||||||||| Sbjct: 147 gtggaagagctggcg 161 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 247 ggccaaggggctcccggtcaccgtctccgtctgcgacgt 285 ||||||||| ||| | ||||||||||||||||||||||| Sbjct: 233 ggccaagggcctcgccgtcaccgtctccgtctgcgacgt 271 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gagtcgtgcttccacctcagccagct 468 ||||||||||||||||| |||||||| Sbjct: 429 gagtcgtgcttccacctgagccagct 454
>ref|XM_471642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccagg 155 |||||||||| |||||||| || || ||||||||||| ||||||||||| ||||| | | Sbjct: 32 ggtggagccttgccggcgccacagctctcgtcaccggtggcagcaaaggaatcgggcgcg 91 Query: 156 cgatcgtggaggagctggcg 175 | ||||||||||| |||||| Sbjct: 92 ccatcgtggaggaactggcg 111
>dbj|AK111082.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-F05, full insert sequence Length = 531 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcggccagg 155 |||||||||| |||||||| || || ||||||||||| ||||||||||| ||||| | | Sbjct: 77 ggtggagccttgccggcgccacagctctcgtcaccggtggcagcaaaggaatcgggcgcg 136 Query: 156 cgatcgtggaggagctggcg 175 | ||||||||||| |||||| Sbjct: 137 ccatcgtggaggaactggcg 156
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 11232835 ggtggagcctcgccggcgccacagctctcgtcaccggcggcagcaaaggaatcgg 11232889 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||||| || || ||||||||||| ||||||||||| ||||| Sbjct: 12890378 ggtggagccttgccggcgccacagctctcgtcaccggtggcagcaaaggaatcgg 12890432 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 ggaggagaggtggagcctggccggcgc 114 |||||||||||||||||| |||||||| Sbjct: 19258631 ggaggagaggtggagcctcgccggcgc 19258657 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ctagagtcgtgcttccacctcagccagct 468 |||||||| ||||||||||| |||||||| Sbjct: 11233988 ctagagtcatgcttccacctaagccagct 11234016
>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09, complete sequence Length = 141580 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 101459 ggtggagcctcgccggcgccacagctctcgtcaccggcggcagcaaaggaatcgg 101513 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ctagagtcgtgcttccacctcagccagct 468 |||||||| ||||||||||| |||||||| Sbjct: 102612 ctagagtcatgcttccacctaagccagct 102640
>emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0068N06, complete sequence Length = 172895 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 96 ggtggagcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 |||||||||| |||||||| || || ||||||||||| ||||||||||| ||||| Sbjct: 38639 ggtggagccttgccggcgccacagctctcgtcaccggtggcagcaaaggaatcgg 38693
>gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064J09 map near 50283S, complete sequence Length = 111122 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 101 agcctggccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgg 150 ||||| ||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 71305 agcctcgccggtgccacggcgcttgtcaccggtggcagcaaaggcatcgg 71354 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 247 ggccaaggggctcccggtcaccgtctccgtctgcgacgt 285 ||||||||| ||| | ||||||||||||||||||||||| Sbjct: 71564 ggccaagggcctcgccgtcaccgtctccgtctgcgacgt 71602 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gagtcgtgcttccacctcagccagct 468 ||||||||||||||||| |||||||| Sbjct: 71875 gagtcgtgcttccacctgagccagct 71900
>dbj|AK058655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F07, full insert sequence Length = 1166 Score = 56.0 bits (28), Expect = 1e-04 Identities = 142/180 (78%) Strand = Plus / Plus Query: 115 gacggcgctcgtcaccggcggcagcaaaggcatcggccaggcgatcgtggaggagctggc 174 |||||| |||||||||||||||| | |||||||| || ||| | ||||| |||||||| Sbjct: 87 gacggccctcgtcaccggcggcacccgcggcatcgggcatgcggtggtggacgagctggc 146 Query: 175 ggggcacggggcgcgggtgcacacgtgcgccaggagcgcggcggagctggaggagtgccg 234 || || |||||| |||||||| ||| |||||| | ||| ||||||| ||| ||| Sbjct: 147 ggcgctgggggcggccgtgcacacctgctccaggaaggaggccgagctgggcgagcgcct 206 Query: 235 ccgccggtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 | | |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 207 cagggagtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 266 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ggcaagctcgacatactggtgaacaacg 368 |||||||||||||| || |||||||||| Sbjct: 313 ggcaagctcgacatcctcgtgaacaacg 340
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 119 gcgctcgtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||||||||||| | |||||||||| Sbjct: 1110806 gcgctcgtcaccggcggcagcgatggcatcggcc 1110773
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 298 cagcagggagcagctcgtggagacgg 323 |||||||||||||||||||||||||| Sbjct: 290954 cagcagggagcagctcgtggagacgg 290979
>ref|NM_187486.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 189 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 237 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 282 cttcggcggcaagctcgacat 302
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 8913223 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 8913175 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 8920039 gacggcgctcgtcaccggcggca 8920017 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 8924026 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 8923973 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 8913130 cttcggcggcaagctcgacat 8913110
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 104111 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 104063 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 110927 gacggcgctcgtcaccggcggca 110905 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 114914 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 114861 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 104018 cttcggcggcaagctcgacat 103998
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 38084 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 38036 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 44900 gacggcgctcgtcaccggcggca 44878 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 48887 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 48834 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 37991 cttcggcggcaagctcgacat 37971
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 8911058 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 8911010 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 8917874 gacggcgctcgtcaccggcggca 8917852 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 8921861 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 8921808 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 8910965 cttcggcggcaagctcgacat 8910945
>dbj|AK109304.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E03, full insert sequence Length = 927 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 250 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 298 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 343 cttcggcggcaagctcgacat 363
>dbj|AK099430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012E01, full insert sequence Length = 1051 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctcc 289 ||||||||||| |||| ||| |||||| |||||||||||||| ||||| Sbjct: 226 gtgggaggccagggggttccgcgtcaccatctccgtctgcgacctctcc 274 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 cttcggcggcaagctcgacat 354 ||||||||||||||||||||| Sbjct: 319 cttcggcggcaagctcgacat 339
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcggc 372 ||||||||||||||| || |||||||||||||| Sbjct: 2883474 cggcaagctcgacattctcgtgaacaacgcggc 2883442 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 gcgcgacggcgctcgtcaccggcg 134 |||||||||||||| ||||||||| Sbjct: 2150309 gcgcgacggcgctcatcaccggcg 2150286
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcgg 371 ||||||| ||||||| |||||||||||||||| Sbjct: 2484961 cggcaagatcgacatcctggtgaacaacgcgg 2484930
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 cggcggcagcaaaggcatcggcc 152 ||||||||||||||||||||||| Sbjct: 1456060 cggcggcagcaaaggcatcggcc 1456082
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 122 ctcgtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||||||||| |||||||||| Sbjct: 4423857 ctcgtcaccggcggcagcagcggcatcggcc 4423887
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 ggaggagaggtggagcctggccggcgc 114 |||||||||||||||||| |||||||| Sbjct: 40463 ggaggagaggtggagcctcgccggcgc 40489
>gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186970 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacacagag 42 |||||||||||||| |||||||||||| Sbjct: 97353 cacgcgcacacgcacacgcacacagag 97327
>dbj|AK098913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I11, full insert sequence Length = 937 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 80 gacggcgctcgtcaccggcggca 102
>dbj|AK062166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B08, full insert sequence Length = 1007 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 115 gacggcgctcgtcaccggcggca 137 ||||||||||||||||||||||| Sbjct: 147 gacggcgctcgtcaccggcggca 169
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 accggcggcagcaaaggcatcgg 150 ||||||||||||||||||||||| Sbjct: 1034588 accggcggcagcaaaggcatcgg 1034566
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 131 ggcggcagcaaaggcatcggccaggcg 157 |||||||||||||||||||||| |||| Sbjct: 835221 ggcggcagcaaaggcatcggcctggcg 835195
>ref|NM_187487.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 297 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 350 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ggcaagctcgacatactggtgaacaacg 368 |||||||||||||| || |||||||||| Sbjct: 397 ggcaagctcgacatcctcgtgaacaacg 424
>ref|XM_956790.1| Neurospora crassa OR74A hypothetical protein (NCU05223.1) partial mRNA Length = 2640 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cggcaagctcgacatactggtgaacaacgc 369 ||||| ||||||| |||||||||||||||| Sbjct: 2256 cggcaggctcgacgtactggtgaacaacgc 2285
>ref|XM_324579.1| Neurospora crassa OR74A hypothetical protein (NCU05223.1) partial mRNA Length = 2640 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cggcaagctcgacatactggtgaacaacgc 369 ||||| ||||||| |||||||||||||||| Sbjct: 2256 cggcaggctcgacgtactggtgaacaacgc 2285
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 125 gtcaccggcggcagcaaaggcatcgg 150 ||||||||||||| |||||||||||| Sbjct: 300435 gtcaccggcggcaccaaaggcatcgg 300460
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 acggcgctcgtcaccggcggca 137 |||||||||||||||||||||| Sbjct: 37479 acggcgctcgtcaccggcggca 37500
>gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS37502 (LLfos-27A6) and 3' overlapping PCR product, complete sequence Length = 41159 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 gcacacgcagacgcacacagag 42 |||||||||||||||||||||| Sbjct: 10514 gcacacgcagacgcacacagag 10535
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 116 acggcgctcgtcaccggcggcagcaaaggcatcggccaggcgatcg 161 ||||||||||||||||||| |||| |||||||||| ||||||| Sbjct: 4654092 acggcgctcgtcaccggcgcgggcaacggcatcggccgcgcgatcg 4654137
>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24, complete sequence Length = 199345 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 aacacgcgcacacgcagacgcacaca 39 |||||||||||||||| ||||||||| Sbjct: 133412 aacacgcgcacacgcacacgcacaca 133437
>dbj|AK069762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K22, full insert sequence Length = 1272 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 241 gtgggaggccaaggggctcccggtcaccgtctccgtctgcgacgtctccctgcg 294 |||||||| |||||| ||| ||||||| ||| ||||||||||||||| |||| Sbjct: 331 gtgggagggcaagggcttccgcgtcaccggctcagtctgcgacgtctccgtgcg 384 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ggcaagctcgacatactggtgaacaacg 368 |||||||||||||| || |||||||||| Sbjct: 431 ggcaagctcgacatcctcgtgaacaacg 458
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 ggcgctcgtcaccggcggcagc 139 |||||||||||||||||||||| Sbjct: 4657344 ggcgctcgtcaccggcggcagc 4657365
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 cggcaagctcgacatactggtgaacaacgc 369 ||||||||||||||| ||||| |||||||| Sbjct: 406727 cggcaagctcgacattctggtcaacaacgc 406756
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 154482 acacgcgcacacgcacacgcacaca 154458
>gb|AY541498.1| Ralstonia solanacearum siderophore synthesis decarboxylase (ssd) gene, complete cds Length = 1683 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 103 cctggccggcgcgacggcgctcgtcaccg 131 ||||||||||||||||| | ||||||||| Sbjct: 1666 cctggccggcgcgacggtgatcgtcaccg 1638
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 aaggcatcggccaggcgatcg 161 ||||||||||||||||||||| Sbjct: 731233 aaggcatcggccaggcgatcg 731253
>gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosome 6, complete sequence Length = 190146 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 56822 acacgcgcacacgcacacgcacaca 56798
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcggc 372 ||||||| ||||||| || |||||||||||||| Sbjct: 1807366 cggcaagatcgacattctcgtgaacaacgcggc 1807334 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gcgcgacggcgctcgtcaccggcg 134 |||||||||||||| ||||||||| Sbjct: 2685334 gcgcgacggcgctcatcaccggcg 2685357
>gb|AC165313.7| Mus musculus chromosome 5, clone RP24-294J23, complete sequence Length = 137597 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 40828 acacgcgcacacgcacacgcacaca 40804
>gb|BC056275.1| Danio rerio zgc:65772, mRNA (cDNA clone MGC:65772 IMAGE:6789082), complete cds Length = 1154 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 |||| |||||||||||||||||||| Sbjct: 998 acacacgcacacgcagacgcacaca 974
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 341 ggcaagctcgacatactggtgaacaacgc 369 |||||||||||||| ||||| |||||||| Sbjct: 2410292 ggcaagctcgacatcctggtcaacaacgc 2410264 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 122 ctcgtcaccggcggcagcaaaggcatcgg 150 |||||||| ||||||||||| |||||||| Sbjct: 2065288 ctcgtcacgggcggcagcaagggcatcgg 2065316 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 gcaaaggcatcggccaggcgatcg 161 |||||||| ||||||||||||||| Sbjct: 1422688 gcaaaggcctcggccaggcgatcg 1422665
>gb|AC120855.9| Mus musculus chromosome 18, clone RP23-270P23, complete sequence Length = 226294 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 213391 acacgcgcacacgcacacgcacaca 213415
>gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosome 5, complete sequence Length = 212783 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 120336 acacgcgcacacgcacacgcacaca 120360
>gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, complete sequence Length = 229261 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 69036 acacgcgcacacgcacacgcacaca 69060
>gb|AC127340.4| Mus musculus BAC clone RP23-188M2 from chromosome 18, complete sequence Length = 210649 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 151217 acacgcgcacacgcacacgcacaca 151193
>emb|CR407582.7| Zebrafish DNA sequence from clone DKEY-224L8 in linkage group 7, complete sequence Length = 200693 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 46706 acacgcgcacacgcacacgcacaca 46730
>gb|AC130545.4| Mus musculus chromosome 18 clone RP24-297E18, complete sequence Length = 156144 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 104469 acacgcgcacacgcacacgcacaca 104445
>gb|AC125084.4| Mus musculus BAC clone RP24-100F10 from chromosome 18, complete sequence Length = 170040 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 121657 acacgcgcacacgcacacgcacaca 121681
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence Length = 182686 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 104904 acacgcgcacacgcacacgcacaca 104928
>emb|CR376723.15| Zebrafish DNA sequence from clone DKEY-90N12 in linkage group 8, complete sequence Length = 213541 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 108638 acacgcgcacacgcacacgcacaca 108614
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 123 tcgtcaccggcggcagcaaaggcatcggccaggcgat 159 |||||||||||||| |||| || ||||| |||||||| Sbjct: 4129952 tcgtcaccggcggcggcaatggaatcggtcaggcgat 4129916 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 122 ctcgtcaccggcggcagcaaaggcatcggccaggcg 157 |||||||||||| ||| ||| |||||||||| |||| Sbjct: 4749562 ctcgtcaccggcagcaccaagggcatcggccgggcg 4749527
>gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's Hospital Oakland Research Institute) complete sequence Length = 209981 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 65493 acacgcgcacacgcacacgcacaca 65469 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 65083 acacgcgcacacgcacacgcacac 65060 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 64866 cacgcgcacacgcacacgcacaca 64843 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 64475 acacgcgcacacgcacacgcacac 64452
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 259392 acacgcgcacacgcacacgcacaca 259416
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcggc 372 ||||||| ||||||| || |||||||||||||| Sbjct: 3141357 cggcaagatcgacattctcgtgaacaacgcggc 3141325 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gcgcgacggcgctcgtcaccggcg 134 |||||||||||||| ||||||||| Sbjct: 865662 gcgcgacggcgctcatcaccggcg 865685
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 114084 acacgcgcacacgcacacgcacaca 114060
>emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in linkage group 19, complete sequence Length = 205235 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 76902 acacgcgcacacgcacacgcacaca 76878
>ref|NM_200533.2| Danio rerio zgc:65772 (zgc:65772), mRNA Length = 1270 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 |||| |||||||||||||||||||| Sbjct: 1016 acacacgcacacgcagacgcacaca 992
>emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in linkage group 24, complete sequence Length = 160005 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 aacacgcgcacacgcagacgcacac 38 |||||||||||||||| |||||||| Sbjct: 128564 aacacgcgcacacgcacacgcacac 128588
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 119 gcgctcgtcaccggcggcagcaaaggcatcggccaggcgat 159 |||||||||||||||| |||| |||||||| |||||||| Sbjct: 3246995 gcgctcgtcaccggcgccagccgcggcatcggtcaggcgat 3246955
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 341 ggcaagctcgacatactggtgaacaacgc 369 |||||||||||||| || ||||||||||| Sbjct: 1469990 ggcaagctcgacatcctcgtgaacaacgc 1470018
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 123 tcgtcaccggcggcagcaaaggcatcggccaggcgat 159 |||||||||||||| |||| || ||||| |||||||| Sbjct: 4496215 tcgtcaccggcggcggcaatggaatcggtcaggcgat 4496179
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcggc 372 ||||||| ||||||| || |||||||||||||| Sbjct: 2293407 cggcaagatcgacattctcgtgaacaacgcggc 2293375 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gcgcgacggcgctcgtcaccggcg 134 |||||||||||||| ||||||||| Sbjct: 848802 gcgcgacggcgctcatcaccggcg 848825
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 63041 acacgcgcacacgcacacgcacaca 63017
>emb|BX530029.5| Zebrafish DNA sequence from clone CH211-153J15 in linkage group 17, complete sequence Length = 155612 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 61403 acacgcgcacacgcacacgcacaca 61427
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggagcctggccggcgcgacggcgct 123 |||||||||||| |||||||||||| Sbjct: 13017575 ggagcctggccgacgcgacggcgct 13017599
>gb|AY235121.1| Meleagris gallopavo clone MNT-152 microsatellite sequence Length = 339 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 209 acacgcgcacacgcacacgcacaca 185
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggagcctggccggcgcgacggcgct 123 |||||||||||| |||||||||||| Sbjct: 56376 ggagcctggccgacgcgacggcgct 56400
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggagcctggccggcgcgacggcgct 123 |||||||||||| |||||||||||| Sbjct: 99952 ggagcctggccgacgcgacggcgct 99976
>emb|BX294653.11| Zebrafish DNA sequence from clone CH211-196H24 in linkage group 20, complete sequence Length = 208836 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 106548 acacgcgcacacgcacacgcacaca 106524
>dbj|AK121262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104L05, full insert sequence Length = 736 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggagcctggccggcgcgacggcgct 123 |||||||||||| |||||||||||| Sbjct: 240 ggagcctggccgacgcgacggcgct 216
>gb|BC066442.1| Danio rerio zgc:65772, mRNA (cDNA clone MGC:77372 IMAGE:6969016), complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacaca 39 |||| |||||||||||||||||||| Sbjct: 1016 acacacgcacacgcagacgcacaca 992
>emb|AL928692.9| Zebrafish DNA sequence from clone CH211-208D15 in linkage group 12, complete sequence Length = 215891 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 155545 acacgcgcacacgcacacgcacaca 155569
>emb|CT009687.10| Zebrafish DNA sequence from clone DKEY-5I20 in linkage group 14, complete sequence Length = 189137 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 37206 acacgcgcacacgcacacgcacaca 37230
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 180823 acacgcgcacacgcacacgcacaca 180847
>emb|CR847961.12| Zebrafish DNA sequence from clone DKEY-154B7 in linkage group 5, complete sequence Length = 237051 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 186894 acacgcgcacacgcacacgcacaca 186918
>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete sequence Length = 217837 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 61028 acacgcgcacacgcacacgcacaca 61052
>emb|AL731822.31| Mouse DNA sequence from clone RP23-105H6 on chromosome 2, complete sequence Length = 218037 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacaca 39 ||||||||||||||| ||||||||| Sbjct: 72579 acacgcgcacacgcacacgcacaca 72603
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 70554 tcgacattctggtgaacaacgcgg 70577
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 100534 cacgcgcacacgcacacgcacaca 100557
>gb|AC163452.12| Mus musculus chromosome 19, clone RP23-405C7, complete sequence Length = 185406 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 164959 acacgcgcacacgcacacgcacac 164982
>gb|AC125068.4| Mus musculus chromosome UNKNOWN clone RP23-432M17, complete sequence Length = 205831 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 157041 acacgcgcacacgcacacgcacac 157018
>gb|AC132905.13| Mus musculus chromosome 13, clone RP24-295E18, complete sequence Length = 187116 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 168863 cacgcgcacacgcacacgcacaca 168886
>gb|AF003731.1| Struthio camelus microsatellite sequence OSM 3 Length = 288 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacacagag 42 |||| |||||||||| |||||||||||| Sbjct: 107 acacacgcacacgcacacgcacacagag 134
>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence Length = 227238 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 45930 cacgcgcacacgcacacgcacaca 45907
>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence Length = 188921 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 101854 acacgcgcacacgcacacgcacac 101831
>gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, complete sequence Length = 197206 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 60146 acacgcgcacacgcacacgcacac 60169
>gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, complete sequence Length = 206056 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 143780 acacgcgcacacgcacacgcacac 143757
>gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's Hospital Oakland Research Institute) complete sequence Length = 132946 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 119106 acacgcgcacacgcacacgcacac 119083
>gb|AC119959.8| Mus musculus chromosome 15, clone RP24-467H19, complete sequence Length = 163783 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 92506 cacgcgcacacgcacacgcacaca 92483
>gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosome 9, complete sequence Length = 187063 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 97368 acacgcgcacacgcacacgcacac 97391
>ref|NM_013900.1| Mus musculus antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 (Mfi2), mRNA Length = 4158 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 3269 cacgcgcacacgcacacgcacaca 3292
>gb|BC040347.1| Mus musculus antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, mRNA (cDNA clone MGC:18315 IMAGE:3672916), complete cds Length = 4102 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 3192 cacgcgcacacgcacacgcacaca 3215
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence Length = 194800 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 48205 acacgcgcacacgcacacgcacac 48228
>ref|XM_959790.1| Neurospora crassa OR74A hypothetical protein (NCU02018.1) partial mRNA Length = 1038 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||||||| ||||| |||| Sbjct: 331 gtcaccggcggcagcaagggcattggcc 358
>ref|XM_329207.1| Neurospora crassa OR74A hypothetical protein (NCU02018.1) partial mRNA Length = 1038 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||||||| ||||| |||| Sbjct: 331 gtcaccggcggcagcaagggcattggcc 358
>gb|DQ286760.1| Dunaliella viridis sodium-coupled phosphate transporter protein (SPT1) gene, complete cds Length = 7922 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 370 cacgcgcacacgcacacgcacaca 393
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 11811 cacgcgcacacgcacacgcacaca 11788
>gb|DQ177443.1| Pseudomonas sp. 10c-1-3 poly beta hydroxyalkanoate operon, complete sequence Length = 6421 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 4760 tcgacatcctggtgaacaacgcgg 4783
>gb|AC142405.4| Mus musculus BAC clone RP24-559P3 from chromosome 5, complete sequence Length = 144109 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 75381 cacgcgcacacgcacacgcacaca 75404
>ref|XM_658149.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5637.2), mRNA Length = 789 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 gtcaccggcggcagcaaaggcatcggcc 152 |||||||||||| |||||||||||||| Sbjct: 46 gtcaccggcggcgccaaaggcatcggcc 73
>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete sequence Length = 192020 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 28493 cacgcgcacacgcacacgcacaca 28470
>gb|AC137691.7| Mus musculus chromosome 13, clone RP23-104G24, complete sequence Length = 204418 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 201495 cacgcgcacacgcacacgcacaca 201472
>gb|AY543839.1| Salmo salar clone Alu308 microsatellite sequence Length = 762 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 269 cacgcgcacacgcacacgcacaca 292
>gb|AY435036.1| Felis catus microsatellite FCA1056 sequence Length = 148 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 97 cacgcgcacacgcacacgcacaca 74
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 63934 acacgcgcacacgcacacgcacac 63957
>gb|AC122481.3| Mus musculus BAC clone RP24-357O20 from chromosome 17, complete sequence Length = 126340 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 120157 cacgcgcacacgcacacgcacaca 120180
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 gccaggcgatcgtggaggagctggcggg 177 |||||||||||| || |||||||||||| Sbjct: 29166 gccaggcgatcgcgggggagctggcggg 29193
>gb|AF041061.3| Mycobacterium smegmatis alkanal monooxygenase-like hypothetical protein (amlp), hypothetical protein, beta-lactamase-like protein (bllp), F420-dependent glucose-6-phosphate dehydrogenase (fgd), putative transcriptional regulator, and hypothetical proteins genes, complete cds Length = 6791 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 gtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||| ||| |||||||||| Sbjct: 4756 gtcaccggcggcaccaagggcatcggcc 4729
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 168245 cacgcgcacacgcacacgcacaca 168222
>gb|AC140320.2| Mus musculus BAC clone RP23-401C13 from chromosome 19, complete sequence Length = 197365 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 112717 acacgcgcacacgcacacgcacac 112740
>emb|AJ271957.1|TCA271957 Theobroma cacao microsatellite DNA, clone mTcCIR58 Length = 559 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 125 cacgcgcacacgcacacgcacaca 102
>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence Length = 170885 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cgcacacgcagacgcacacagagc 43 |||||||||| ||||||||||||| Sbjct: 54267 cgcacacgcacacgcacacagagc 54244
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 123 tcgtcaccggcggcagcaaaggcatcgg 150 |||||||||||||| |||| |||||||| Sbjct: 11782 tcgtcaccggcggcggcaagggcatcgg 11755
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gctcccggtcaccgtctccg 275 |||||||||||||||||||| Sbjct: 22370 gctcccggtcaccgtctccg 22389
>gb|AC124681.3| Mus musculus BAC clone RP24-261H7 from chromosome 16, complete sequence Length = 173837 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 50841 cacgcgcacacgcacacgcacaca 50864
>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence Length = 160137 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 18143 acacgcgcacacgcacacgcacac 18120
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 127671 acacgcgcacacgcacacgcacac 127694
>gb|AC121838.2| Mus musculus BAC clone RP24-74O18 from 1, complete sequence Length = 180961 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 161614 acacgcgcacacgcacacgcacac 161591
>gb|AC118686.8| Mus musculus chromosome 6, clone RP23-402P24, complete sequence Length = 223851 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 36689 acacgcgcacacgcacacgcacac 36666
>gb|AC107753.10| Mus musculus chromosome 15, clone RP23-243P15, complete sequence Length = 173814 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggggcacggggcgcgggtgc 194 |||||||||||||||||||| Sbjct: 37344 ggggcacggggcgcgggtgc 37363
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 84154 cacgcgcacacgcacacgcacaca 84131
>emb|AL158837.14| Human DNA sequence from clone RP11-102C16 on chromosome 1 Contains the gene for a novel protein (FLJ14904, FLJ29032, DKFZp434L0217), a novel gene, the GPA33 gene for glycoprotein A33 (transmembrane), the gene for novel protein (FLJ37495) and three CpG islands, complete sequence Length = 148849 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cagggaggagaggtggagcc 104 |||||||||||||||||||| Sbjct: 136962 cagggaggagaggtggagcc 136981
>emb|AL158823.11| Human DNA sequence from clone RP11-151F5 on chromosome 9 Contains part of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2), a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 175558 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 128757 cacgcgcacacgcacacgcacaca 128734
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||||||||| |||||||||| Sbjct: 592384 tcgacatactggtcaacaacgcgg 592407
>emb|CR407563.8| Zebrafish DNA sequence from clone DKEY-252G21 in linkage group 8, complete sequence Length = 109914 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 31861 acacgcgcacacgcacacgcacac 31838
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gaggagtgccgccgccggtg 243 |||||||||||||||||||| Sbjct: 2990764 gaggagtgccgccgccggtg 2990783
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ggccggcgcgacggcgctcg 125 |||||||||||||||||||| Sbjct: 2683925 ggccggcgcgacggcgctcg 2683906 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 cggcgcgacggcgctcgtcaccggcggc 136 |||| ||||||||||||||| ||||||| Sbjct: 1087000 cggcacgacggcgctcgtcatcggcggc 1087027
>gb|AC163018.3| Mus musculus chromosome 15, clone RP24-366J14, complete sequence Length = 175394 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggggcacggggcgcgggtgc 194 |||||||||||||||||||| Sbjct: 51635 ggggcacggggcgcgggtgc 51654
>gb|AC106128.6| Rattus norvegicus 1 BAC CH230-149H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 210385 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 73637 acacgcgcacacgcacacgcacac 73660
>emb|BX842622.1| Neurospora crassa DNA linkage group I BAC clone B15B3 Length = 76690 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 gtcaccggcggcagcaaaggcatcggcc 152 ||||||||||||||||| ||||| |||| Sbjct: 66766 gtcaccggcggcagcaagggcattggcc 66739
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 gcgctcgtcaccggcggcagcaaaggcatcgg 150 ||||| |||||||||||||| || |||||||| Sbjct: 180347 gcgctggtcaccggcggcagtaagggcatcgg 180378
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 10719 tcgacatcctggtgaacaacgcgg 10742
>emb|AL591172.3| Zebrafish DNA sequence from clone BUSM1-48C11 Contains two novel genes, two novel genes for a proteins similar to MHC class II alpha and beta chain, the putative novel transposon LDR1 and three CpG islands, complete sequence Length = 106049 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 72845 cacgcgcacacgcacacgcacaca 72868
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 gccaggcgatcgtggaggagctggcggg 177 |||||||||||| || |||||||||||| Sbjct: 12761 gccaggcgatcgcgggggagctggcggg 12788
>emb|AJ007731.1|SCO007731 Streptomyces coelicolor scbR gene, scbA gene, ORFs A,B,X & Z Length = 6727 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 4288 tcgacatcctggtgaacaacgcgg 4265
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 101866 cacgcgcacacgcacacgcacaca 101843
>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5, complete sequence Length = 181599 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 111425 cacgcgcacacgcacacgcacaca 111402
>gb|BC065662.1| Danio rerio zgc:77390, mRNA (cDNA clone MGC:77390 IMAGE:6969484), complete cds Length = 2544 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 2232 acacgcgcacacgcacacgcacac 2209
>emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in linkage group 1, complete sequence Length = 185266 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 178477 acacgcgcacacgcacacgcacac 178500
>gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequence Length = 38754 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||||||||||||||| |||| Sbjct: 20334 tcgacatactggtgaacaatgcgg 20357
>gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequence Length = 40824 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||||||||||||||| |||| Sbjct: 23146 tcgacatactggtgaacaatgcgg 23123
>gb|DQ397849.1| Cenarchaeum symbiosum clone C08E01, complete sequence Length = 37303 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||||||||||||||| |||| Sbjct: 28578 tcgacatactggtgaacaatgcgg 28601
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 4947616 tcgacatcctggtgaacaacgcgg 4947593
>emb|BX324133.12| Zebrafish DNA sequence from clone CH211-209H1 in linkage group 10, complete sequence Length = 127130 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 32928 cacgcgcacacgcacacgcacaca 32951
>dbj|AK036444.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830108P05 product:antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, full insert sequence Length = 4055 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 3204 cacgcgcacacgcacacgcacaca 3227
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 tcgtcaccggcggcagcaaaggcatcgg 150 |||||||||||| |||||| |||||||| Sbjct: 3474473 tcgtcaccggcgccagcaagggcatcgg 3474500
>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence Length = 205466 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 65821 acacgcgcacacgcacacgcacac 65798
>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence Length = 147599 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 95335 acacgcgcacacgcacacgcacac 95358
>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence Length = 183148 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 162356 cacgcgcacacgcacacgcacaca 162333
>dbj|AK083761.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130004H04 product:unclassifiable, full insert sequence Length = 2892 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 2218 acacgcgcacacgcacacgcacac 2241
>gb|BC096797.1| Danio rerio cDNA clone IMAGE:7284172 Length = 1511 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 1331 cacgcgcacacgcacacgcacaca 1354
>emb|AL844567.22| Zebrafish DNA sequence from clone DKEY-77D17 in linkage group 16, complete sequence Length = 174845 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 91267 cacgcgcacacgcacacgcacaca 91290
>emb|BX294169.10| Zebrafish DNA sequence from clone DKEY-151N15 in linkage group 5, complete sequence Length = 73230 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 35873 cacgcgcacacgcacacgcacaca 35850
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 cgcacacgcagacgcacacagagcgatc 47 |||||||||| ||||||||||| ||||| Sbjct: 4708968 cgcacacgcacacgcacacagatcgatc 4708941
>ref|NM_205652.1| Danio rerio zgc:77390 (zgc:77390), mRNA Length = 2544 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 2232 acacgcgcacacgcacacgcacac 2209
>emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 in linkage group 12, complete sequence Length = 172778 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 72386 cacgcgcacacgcacacgcacaca 72409
>dbj|AB047799.2| Mus musculus MTf gene for membrane-bound transferrin-like protein, complete cds Length = 10922 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 10040 cacgcgcacacgcacacgcacaca 10063
>gb|AC150660.4| Mus musculus BAC clone RP23-41F9 from chromosome 15, complete sequence Length = 229655 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 218085 cacgcgcacacgcacacgcacaca 218108
>gb|AC124392.6| Mus musculus BAC clone RP24-441F24 from chromosome 13, complete sequence Length = 159514 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 158982 cacgcgcacacgcacacgcacaca 159005
>ref|XM_578714.1| PREDICTED: Rattus norvegicus similar to photoreceptor outer segment all-trans retinol dehydrogenase (LOC503191), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gacatactggtgaacaacgc 369 |||||||||||||||||||| Sbjct: 256 gacatactggtgaacaacgc 275
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcgatcgtggaggagctgg 173 |||||||||||||||||||| Sbjct: 4496770 ggcgatcgtggaggagctgg 4496751 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcgccaggagcgcggcggag 220 |||||||||||||||||||| Sbjct: 1605349 gcgccaggagcgcggcggag 1605368
>gb|AC018866.9| Homo sapiens BAC clone RP11-57J18 from 2, complete sequence Length = 154983 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaggagaggtggagcctgg 107 |||||||||||||||||||| Sbjct: 142352 ggaggagaggtggagcctgg 142371
>gb|AC125465.4| Mus musculus BAC clone RP23-333A16 from chromosome unknown, complete sequence Length = 207988 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 147941 acacgcgcacacgcacacgcacac 147964
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cggcgctcgtcaccggcggc 136 |||||||||||||||||||| Sbjct: 2155177 cggcgctcgtcaccggcggc 2155158
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 340 cggcaagctcgacatactggtgaacaacgcgg 371 ||||||||||||||| ||||| ||||| |||| Sbjct: 5020240 cggcaagctcgacatcctggtcaacaatgcgg 5020209 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 2140730 tcgacatgctggtgaacaacgcgg 2140707 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 1015718 tcgacatgctggtgaacaacgcgg 1015695
>emb|BX323812.10| Zebrafish DNA sequence from clone CH211-150H8 in linkage group 2, complete sequence Length = 153556 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 99304 cacgcgcacacgcacacgcacaca 99327
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 cgcacacgcagacgcacacagagcgatc 47 |||||||||| ||||||||||| ||||| Sbjct: 81040 cgcacacgcacacgcacacagatcgatc 81013
>gb|AC154860.2| Mus musculus BAC clone RP23-9N20 from 13, complete sequence Length = 192309 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 114004 cacgcgcacacgcacacgcacaca 114027
>gb|AC154321.2| Mus musculus BAC clone RP23-316B9 from 13, complete sequence Length = 177816 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 141446 cacgcgcacacgcacacgcacaca 141423
>emb|BX548024.4| Zebrafish DNA sequence from clone DKEY-218H11 in linkage group 2, complete sequence Length = 218565 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 185768 acacgcgcacacgcacacgcacac 185791
>emb|AL732415.9| Zebrafish DNA sequence from clone BUSM1-106A20 in linkage group 9, complete sequence Length = 112460 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 68356 acacgcgcacacgcacacgcacac 68333
>emb|CR855301.19| Zebrafish DNA sequence from clone CH211-193K8 in linkage group 17, complete sequence Length = 149563 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cacacgcagacgcacacaga 41 |||||||||||||||||||| Sbjct: 115622 cacacgcagacgcacacaga 115603
>emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chromosome 17, complete sequence Length = 220163 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 9109 cacgcgcacacgcacacgcacaca 9086
>emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2547L24 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203777 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggaggagaggtggagcctgg 107 |||||||||||||||||||| Sbjct: 87394 ggaggagaggtggagcctgg 87375
>dbj|AB085816.2| Pseudomonas putida phbC, phbA, phbB, flp, orf5 genes, complete cds Length = 8991 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcgacatactggtgaacaacgcgg 371 ||||||| |||||||||||||||| Sbjct: 4763 tcgacatcctggtgaacaacgcgg 4786
>gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome 12, complete sequence Length = 211561 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 163520 cacgcgcacacgcacacgcacaca 163497
>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1, complete sequence Length = 184073 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 165689 acacgcgcacacgcacacgcacac 165712
>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17, complete sequence Length = 165991 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 60227 acacgcgcacacgcacacgcacac 60250
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gctcgacatactggtgaacaacgc 369 ||||||||| |||||||||||||| Sbjct: 345993 gctcgacatcctggtgaacaacgc 346016
>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence Length = 181095 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 128430 acacgcgcacacgcacacgcacac 128453
>gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, complete sequence Length = 154779 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 10017 acacgcgcacacgcacacgcacac 9994
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gcgcacacgcagacgcacac 38 |||||||||||||||||||| Sbjct: 2970060 gcgcacacgcagacgcacac 2970079
>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence Length = 177464 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 26298 cacgcgcacacgcacacgcacaca 26275
>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence Length = 191966 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 185918 cacgcgcacacgcacacgcacaca 185941
>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence Length = 248067 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 243861 acacgcgcacacgcacacgcacac 243884
>gb|AC142115.3| Mus musculus BAC clone RP23-327M1 from 3, complete sequence Length = 174667 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ctggcggggcacggggcgcgggtg 193 ||||||| |||||||||||||||| Sbjct: 126035 ctggcggcgcacggggcgcgggtg 126012
>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence Length = 198130 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 66826 cacgcgcacacgcacacgcacaca 66849
>emb|CT033847.5| Mouse DNA sequence from clone RP24-225N8 on chromosome 17, complete sequence Length = 171164 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 169525 cacgcgcacacgcacacgcacaca 169502
>emb|BX000353.8| Zebrafish DNA sequence from clone DKEY-147H15, complete sequence Length = 189040 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 aacacgcgcacacgcagacgcacacaga 41 ||||||||||||| || ||||||||||| Sbjct: 67006 aacacgcgcacacacacacgcacacaga 67033
>gb|AC160112.2| Mus musculus BAC clone RP24-80F17 from chromosome 12, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 37060 cacgcgcacacgcacacgcacaca 37083
>emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, complete sequence Length = 156634 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 aacacgcgcacacgcagacgcacacaga 41 ||||||||||||| || ||||||||||| Sbjct: 123688 aacacgcgcacacacacacgcacacaga 123715
>emb|AJ308747.1|CAR308747 Coffea arabica microsatellite DNA, clone 19-2CTG Length = 239 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 152 acacgcgcacacgcacacgcacac 175
>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete sequence Length = 221374 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 62680 acacgcgcacacgcacacgcacac 62703
>emb|AL806535.7| Mouse DNA sequence from clone RP23-456J6 on chromosome 4, complete sequence Length = 181854 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 167796 acacgcgcacacgcacacgcacac 167773
>emb|AL137012.6| Human DNA sequence from clone RP1-80G16 on chromosome 6. Contains a 60S ribosomal protein L21 (RPL21) pseudogene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 100948 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 99300 cacgcgcacacgcacacgcacaca 99277
>emb|AL606746.17| Mouse DNA sequence from clone RP23-423J10 on chromosome 3, complete sequence Length = 203345 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 acacgcgcacacgcagacgcacac 38 ||||||||||||||| |||||||| Sbjct: 57261 acacgcgcacacgcacacgcacac 57284
>emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chromosome X, complete sequence Length = 220669 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 202344 cacgcgcacacgcacacgcacaca 202321
>dbj|AB024336.1| Mus musculus mRNA for membrane-bound transferrin-like protein p97, complete cds Length = 4158 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacgcgcacacgcagacgcacaca 39 |||||||||||||| ||||||||| Sbjct: 3269 cacgcgcacacgcacacgcacaca 3292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,065,960 Number of Sequences: 3902068 Number of extensions: 4065960 Number of successful extensions: 103223 Number of sequences better than 10.0: 219 Number of HSP's better than 10.0 without gapping: 223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98925 Number of HSP's gapped (non-prelim): 4290 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
