>TRAF1_HUMAN (Q13077) TNF receptor-associated factor 1 (Epstein-Barr|
           virus-induced protein 6)
          Length = 416

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 265 CAREDRAKMAPTTRLRATNHAAPEPSHAGIG 173
           C  ED   ++P +RLR    A PE + AGIG
Sbjct: 57  CRGEDLQSISPGSRLRTQEKAHPEVAEAGIG 87

>RS5_SULAC (O05641) 30S ribosomal protein S5P|
          Length = 214

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 361 GKEKMLKERMRCSTADEALRVIPARRGEGDCGC 263
           GK K L+  ++ +  D  +R+IP RRG G   C
Sbjct: 94  GKAKQLRVAIQKAIRDAKMRIIPVRRGCGSWEC 126

>VATC_DROME (Q9V7N5) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 714

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 208 HAAPEPSHAGIGQHHHPAAAIVDARSLASCCSAWPCPPARA 86
           H   +P H     HHH     +  +S A+C  A P  PA A
Sbjct: 128 HHQNKPQHYHHHHHHHQLPQDLKGKSAATCSPATPPAPASA 168

>CRLS1_RAT (Q5U2V5) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CLS)
          Length = 302

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -1

Query: 238 APTTRLRATNHAAPEPSHAGIGQHHHPAAAIVDARSLASCCSAWPCPPARALACVAL 68
           +P T       AAPEP+  G      P+A  V A + +S  + W  P   ++  + L
Sbjct: 64  SPRTHCSGAGKAAPEPAAGGDAAAQAPSARWVRASATSSYENPWTIPNLLSMTRIGL 120

>NURM_NEUCR (P42116) NADH-ubiquinone oxidoreductase 17.8 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-17.8KD) (CI-17.8KD)
          Length = 186

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -1

Query: 262 AREDRAKMAPTTRLRATNHAAPEP---SHAGIGQHHHPAAA 149
           AR+ RA     TR  A++  AP     S AG G+HHH  AA
Sbjct: 12  ARQVRAPCVRNTRRYASDSHAPADHTHSAAGHGEHHHANAA 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,473,426
Number of Sequences: 219361
Number of extensions: 598245
Number of successful extensions: 2501
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2498
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)