>GBF_DICDI (P36417) G-box-binding factor (GBF)|
          Length = 708

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -3

Query: 483 HHQN--QHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH 310
           HHQ   Q  +H   QQ      Q+  +QH    Q  Q+ Q   +H+ +  Q  ++    H
Sbjct: 149 HHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQ-QQQQQHQQQHH 207

Query: 309 *EPVYLSRQHILAFLHHEGNSPPSQEHQ 226
            +     +QH     HH+ +S P Q+HQ
Sbjct: 208 QQQQQQQQQHHQQQQHHQ-HSQPQQQHQ 234



 Score = 32.3 bits (72), Expect = 0.78
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH*E 304
           HHQ Q   H + QQ     HQ   + H   +Q  Q H Q Q+H        ++ H +  +
Sbjct: 183 HHQLQQHQHQHQQQQQQQQHQ--QQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQ 240

Query: 303 PVYLSRQH 280
             +  +QH
Sbjct: 241 HQHNQQQH 248

>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 311

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIH------QQVQRHRTEFAQYVENA 322
           HHQ Q  +H YPQQ          + H  P+Q  Q H      QQ   H  +  Q+ ++ 
Sbjct: 219 HHQQQQQFHDYPQQQ--------QQFHDHPQQKQQFHDRPQQQQQFHDHHQQQQQFHDHH 270

Query: 321 HMKH*EPVYLSRQHILAFLHHEGNSPPSQEH 229
           H +  +  +  +   L      G   P QEH
Sbjct: 271 HQQQQQQFHDQQLTYLLTADITGEHTPYQEH 301

>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH--*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH 310
           HH + H +H   Q P    HQ     H   +  QA Q+HQQV  H  + A +  + H  H
Sbjct: 64  HHHHHHHHHHQHQAPHQAPHQAHHHHHHGEVNHQAPQVHQQV--HGQDQAHHHHHHHHHH 121

Query: 309 *EP 301
             P
Sbjct: 122 LHP 124



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 501 GEALAFHHQNQHSYHSYPQQP 439
           G+  A HH + H +H +PQQP
Sbjct: 107 GQDQAHHHHHHHHHHLHPQQP 127

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFA-------QYVEN 325
           HH + H +H +   P    H LG   H     A   H   + H    A       ++  +
Sbjct: 94  HHHHPHPHHHHHHHPPHHHHHLGHHHH--HHHAAHHHHHEEHHHHHHAAHHHHHEEHHHH 151

Query: 324 AHMKH*EPVYLSRQHILAFLHHEGNSPPSQEHQVH 220
            H  H  P +    H L + HH  ++P    H  H
Sbjct: 152 HHAAHHHPWF--HHHHLGYHHH--HAPHHHHHHHH 182

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
 Frame = +3

Query: 195 PRPGDYSADGPGAPEMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSYGAG--- 365
           PRPG     G G     G  P+ + RPG    RD Q       +  R GQ Q  GAG   
Sbjct: 219 PRPGGGPRPGGGPRPGGGPRPQGQGRPG--GQRDGQRDGQRDGQGNRGGQRQGAGAGGPR 276

Query: 366 ------PAGGSVRPAAGVSAG--GYQADDRPG 437
                 P GGS RP  G + G  G  + +R G
Sbjct: 277 PQGGPRPQGGS-RPQGGSAQGAQGAPSQERQG 307

>SOX17_HUMAN (Q9H6I2) Transcription factor SOX-17|
          Length = 414

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 507 GEGEALAFHHQNQHSYHSYPQ---QPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQ 337
           G G  +   HQ+QH +  +P    QPSP    L  R    P Q  ++  +V   RTEF Q
Sbjct: 308 GRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVD--RTEFEQ 365

Query: 336 YV 331
           Y+
Sbjct: 366 YL 367

>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein|
           1)
          Length = 614

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
 Frame = +3

Query: 189 KRPRPGDYSADGPGAPEMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSYGAG- 365
           + P PG  +  GPGAP      P     P  AA     A     +     G  Q  GAG 
Sbjct: 60  RAPEPGPPADGGPGAPARYANVPPGGFEPLPAA--PPAAFPPLLQPQASPGSFQPPGAGF 117

Query: 366 -PAGGSVRPAAGVSAGGYQA 422
              GG+++P+     GGYQA
Sbjct: 118 PYGGGALQPSPQQLYGGYQA 137

>FIBA_BOVIN (P02672) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide|
           A]
          Length = 615

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 192 RPRPGDYSADGPGAPE--MAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSYGAG 365
           RP PG      PG PE   AG +      PG A   +T +  +S  R   +G      + 
Sbjct: 343 RPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNTGSSGSSSFRPDSSGHGNIRPSS 402

Query: 366 PAGGSVRPAAGVSAGGYQ 419
           P  G+ R    VS+G  Q
Sbjct: 403 PDWGTFREEGSVSSGTKQ 420

>BAF1_KLULA (P26375) Transcription factor BAF1 (ARS-binding factor 1) (Protein|
           ABF1) (Bidirectionally acting factor)
          Length = 494

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAH 319
           HHQ QH  H +P  P+   HQL   Q    +   Q  QQ  +H+ +   +V++ H
Sbjct: 278 HHQVQH--HHHPSIPAHHQHQLPEGQQRDVQHHHQQQQQQLQHQEQHQSHVDSGH 330

>DRI_DROME (Q24573) Protein dead ringer (Protein retained)|
          Length = 911

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 26/84 (30%), Positives = 34/84 (40%)
 Frame = -3

Query: 480 HQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH*EP 301
           HQ QHS     QQ     HQ   +Q    +   Q H Q QR R++     ++        
Sbjct: 512 HQQQHSQQQQQQQHH---HQQQQQQ----QSQQQHHLQQQRQRSQSPDLSKHEA------ 558

Query: 300 VYLSRQHILAFLHHEGNSPPSQEH 229
             LS Q  L  ++H  NSPP   H
Sbjct: 559 --LSAQVALWHMYHNNNSPPGSAH 580

>RL1_HHV2H (P28283) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)|
          Length = 261

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
 Frame = +3

Query: 189 KRPRPGDYSADGPGAPEM--AGYYPRDEER--PGY---AAVRDTQALNASYERFLRTGQI 347
           +RPRPG  +   PGAP +   G  P  + +  P Y    AV    A ++   R+L   Q 
Sbjct: 14  RRPRPGAPAVPRPGAPAVPRPGALPTADSQMVPAYDSGTAVESAPAASSLLRRWLLVPQA 73

Query: 348 -QSYGAGPAGGSVRPAAG--VSAGGYQADDRPGMAAXXXXXXXXXXXXXXPEPPLPP 509
             S  A  AG      A    S GG +A + P  A               P+ PLPP
Sbjct: 74  DDSDDADYAGNDDAEWANSPPSEGGGKAPEAPHAAPAAACPPPPPRKERGPQRPLPP 130

>LSB3_YEAST (P43603) LAS seventeen-binding protein 3 (LAS17-binding protein 3)|
          Length = 451

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +3

Query: 201 PGDYSADGPGAPEMAGYYPRDEERPGYAAVRDTQALNASYERF--LRTGQIQSYGAGPAG 374
           P   +  G GA  M G      E   +  + +TQ    S+  F  +  G   S  AGP G
Sbjct: 74  PSAIAMAGAGAGGMVGI-----ELTDFVFILNTQDAVKSFSEFGTITLGGNVSVSAGPLG 128

Query: 375 GSVRPAAGVSAGGYQA 422
            S   AA  SAGG  A
Sbjct: 129 RSAEAAASASAGGVAA 144

>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel|
           gene 3 protein)
          Length = 836

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/56 (28%), Positives = 33/56 (58%)
 Frame = -3

Query: 450 PQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH*EPVYLSRQ 283
           P +P+ GGH+ GSR H   R+A  +  + +  RT++ ++  +A + + E +  +R+
Sbjct: 643 PGRPAGGGHRAGSRAHGHGREA--VVAKPKHKRTDYRRWKSSAEISYEEALRRARR 696

>ACPD_BRAJA (Q89K13) Putative acyl carrier protein phosphodiesterase (EC|
           3.1.4.14) (ACP phosphodiesterase)
          Length = 202

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 306 LNASYERFLRTGQIQSYGA-GPAG--GSVRPAAGVSAGGYQADDRPGMA 443
           L A  +R L  G+   YGA GP G  G+ R    +S GGY   D P  A
Sbjct: 102 LKAWIDRILVAGKTFQYGANGPQGLAGAKRVIVAISRGGYYGADMPTAA 150

>BTBD2_HUMAN (Q9BX70) BTB/POZ domain-containing protein 2|
          Length = 525

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +3

Query: 357 GAGPA-GGSVRPAAGVSAGGYQADDRPGMAAXXXXXXXXXXXXXXPEPPLPP 509
           G GP  GGS  P+A  +A        PG AA              P PP PP
Sbjct: 17  GVGPGTGGSPGPSANAAA-----TPAPGNAAAAAAAAAAAAAAPGPTPPAPP 63

>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/88 (25%), Positives = 35/88 (39%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH*E 304
           HHQ Q  +  + QQ     HQ   +Q        Q  QQ   H  +  Q+ ++ H +  +
Sbjct: 208 HHQEQQFHDHHQQQQQFHDHQQQQQQ--------QQQQQFHDHHQQKQQFHDHHHHQQQQ 259

Query: 303 PVYLSRQHILAFLHHEGNSPPSQEHQVH 220
             +  +Q    F  H+      Q+HQ H
Sbjct: 260 QFHDHQQQQQQFHDHQ-----QQQHQFH 282



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
 Frame = -3

Query: 483 HHQNQHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIH-----QQVQRHRTEFAQYVENAH 319
           H Q QH +H +PQQ          + H  P+Q  Q H     QQ ++   +  Q  +  H
Sbjct: 274 HQQQQHQFHDHPQQK--------QQFHDHPQQQQQFHDHHHQQQQKQQFHDHHQQKQQFH 325

Query: 318 MKH*EPVYLSRQHILAFLHHEGNSPPSQEHQ 226
             H +       H      H+ +    Q+ Q
Sbjct: 326 DHHQQKQQFHDHHQQQQQFHDHHQQQQQQQQ 356

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
            (dDOT1L)
          Length = 1848

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/81 (22%), Positives = 34/81 (41%)
 Frame = -3

Query: 471  QHSYHSYPQQPSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH*EPVYL 292
            +H      QQ       L +  H   RQ  ++ +Q Q+ + +   +  + H +H  P ++
Sbjct: 1196 EHYMVQQQQQLQQQQLMLAAAAHAAQRQQMRVEEQQQQQQHQHHHHHHHHHPQHRLPQHV 1255

Query: 291  SRQHILAFLHHEGNSPPSQEH 229
              QH      +E  +PP+  H
Sbjct: 1256 QHQHPHQHHPNEFKAPPADSH 1276

>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)|
          Length = 623

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
 Frame = -3

Query: 492 LAFHHQNQHSYHSYP-----QQPSPGGH-----QLGSRQH*LPRQA*QIHQQVQRHRTEF 343
           LA HH + H +HS+P     QQ     H     QL  +Q  L  Q  Q  QQ   H+++ 
Sbjct: 72  LAQHHHHHHHHHSHPHHQLAQQTGLHSHHTMQQQLQQQQQSLLLQHPQQQQQQHSHQSQQ 131

Query: 342 AQ---YVENAHMKH 310
            Q   Y  +A + H
Sbjct: 132 QQQHGYGSSAQLPH 145

>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 288 VRDTQALNASYERFLRTGQIQSYGAGPAGGSVRPAAGVSAGGYQADD 428
           V+DT+++   Y         ++YGAGPA G   P  G  +GGY + D
Sbjct: 599 VKDTESIAKLYG-----SAREAYGAGPARG---PGPGAGSGGYVSPD 637

>SUR2_CAEEL (Q10669) Protein sur-2|
          Length = 1587

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 483  HHQNQHSYHSYPQQ-PSPGGHQLGSRQH*LPRQA*QIHQQVQRHRTEFAQYVENAHMKH 310
            HH  QH +  + QQ P+P        Q+  P+Q     QQ+Q+H+ +  QY++     H
Sbjct: 1522 HHMQQHPHLPHHQQMPAPMHTMNPMMQNMTPQQQYLYMQQLQQHQ-QHQQYMQQQQQHH 1579

>HUNB_DROSL (O46256) Protein hunchback (Fragments)|
          Length = 196

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 498 EALAFHHQNQHSYHSYPQQP 439
           E ++ HH + H++HSY Q P
Sbjct: 13  EPISHHHHHHHAHHSYHQHP 32

>GATA4_HUMAN (P43694) Transcription factor GATA-4 (GATA-binding factor 4)|
          Length = 442

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +3

Query: 195 PRPGDYSADGPGAPEMAGYYPRDEERPGYAAVR--DTQALNASYERFLRTGQIQSYGAGP 368
           P PG Y A GPG P M G        P Y       +  L  SY   L+ G   S   GP
Sbjct: 13  PPPGAYQAGGPG-PFMHGAGAASS--PVYLPTPRVPSSVLGLSY---LQGGGAGSASGGP 66

Query: 369 AGGSVRPAAGVSAGGYQ 419
           +GGS   AA  +  G Q
Sbjct: 67  SGGSPGGAASGAGPGTQ 83

>PCX_DROME (P18490) Protein pecanex|
          Length = 3433

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 357 GAGPAGGSVRPAAGVSAGGYQADD 428
           GAGP+GGSV  A GVSAG    D+
Sbjct: 831 GAGPSGGSV--AVGVSAGNDDEDE 852


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,955,213
Number of Sequences: 219361
Number of extensions: 959171
Number of successful extensions: 4375
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4320
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)