Clone Name | bart36f08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YQJG_ECOLI (P42620) Hypothetical protein yqjG | 81 | 2e-15 | 2 | ECM4_YEAST (P36156) Extracellular matrix protein 4 | 57 | 4e-08 | 3 | YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 i... | 47 | 2e-05 | 4 | IN21_MAIZE (P49248) IN2-1 protein | 33 | 0.47 | 5 | YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III | 33 | 0.61 | 6 | GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18)... | 31 | 2.3 | 7 | GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.1... | 30 | 3.0 | 8 | GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061 | 29 | 8.9 |
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>YQJG_ECOLI (P42620) Hypothetical protein yqjG| Length = 328 Score = 81.3 bits (199), Expect = 2e-15 Identities = 53/132 (40%), Positives = 66/132 (50%), Gaps = 6/132 (4%) Frame = +1 Query: 142 DEVTDTGAFDRTPSTFRSFVSSDGA------ARFPAVAGRYHLYVSYACPWASRCLAYLK 303 D + G F R+ S FR+++++DGA F A RYHLYVS ACPWA R L K Sbjct: 15 DTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRK 74 Query: 304 LKGLDHAISFSSVKPIFERTRESDDHLGWVFPAAAGEVPGADPDPFNGARSVRDLYEIAS 483 LKGL+ IS S V P+ GW F PGA D + LY A Sbjct: 75 LKGLEPFISVSVVNPLMLEN-------GWTFD---DSFPGATGDTLYQNEFLYQLYLHAD 124 Query: 484 KNYTGKPTVPVL 519 +Y+G+ TVPVL Sbjct: 125 PHYSGRVTVPVL 136
>ECM4_YEAST (P36156) Extracellular matrix protein 4| Length = 370 Score = 56.6 bits (135), Expect = 4e-08 Identities = 49/152 (32%), Positives = 63/152 (41%), Gaps = 32/152 (21%) Frame = +1 Query: 160 GAFDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFSS 339 GAF R S+FR +S PA GRY LYVS ACPWA R L LKGL I S Sbjct: 11 GAFKRQVSSFRETISKQHPIYKPA-KGRYWLYVSLACPWAHRTLITRALKGLTSVIGCSV 69 Query: 340 VK-----------PIFERTRESDDHLGWVFPAAAG-------------EVPG-------- 423 V + ++ +S+D L A G E+ Sbjct: 70 VHWHLDEKGWRFLDMEKQLEDSEDFLEHWHDVAGGIRTAKEDSSKSFAEIKNDSQRFMVD 129 Query: 424 ADPDPFNGARSVRDLYEIASKNYTGKPTVPVL 519 A +P G + + DLY + Y+ + TVPVL Sbjct: 130 ATNEPHYGYKRISDLYYKSDPQYSARFTVPVL 161
>YM85_YEAST (Q04806) Hypothetical 42.4 kDa protein in FAA4-HOR7 intergenic| region Length = 366 Score = 47.4 bits (111), Expect = 2e-05 Identities = 46/148 (31%), Positives = 55/148 (37%), Gaps = 30/148 (20%) Frame = +1 Query: 166 FDRTPSTFRSFVSSDGAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFSSVK 345 F R S FR +S+D PA GRY LYV+ CPWA R L LKGL I S Sbjct: 13 FKRQSSPFREIISADHPIYKPA-KGRYWLYVALPCPWAQRTLITRALKGLAPIIGCSVAH 71 Query: 346 --------PIFERTRESDDHLGWVFPAAAG----------------------EVPGADPD 435 E + W F A G V G D + Sbjct: 72 WHLDDKGWRFLEEGDGKTNERHW-FDIAGGISSVNLNTSTPVANIPNNAHRLLVDGTD-E 129 Query: 436 PFNGARSVRDLYEIASKNYTGKPTVPVL 519 P G + + D Y +Y G+ TVPVL Sbjct: 130 PHYGYKRLSDFYFKTKPDYKGRFTVPVL 157
>IN21_MAIZE (P49248) IN2-1 protein| Length = 243 Score = 33.1 bits (74), Expect = 0.47 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAISFSSVKPIFERTRESDDHLGWVFPA- 402 P G LY+ Y CP+A R LKGL + ++ + D W Sbjct: 27 PVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAI--------DLQDKPAWYKDKV 78 Query: 403 -AAGEVPGADPDPFNGARSVRDLYEIASKNYTGKPTVP 513 A G VP + D S+ DL N+ G +P Sbjct: 79 YAQGTVPSLEHDSEVRGESL-DLIRYIDSNFDGPALLP 115
>YK67_CAEEL (P34345) Hypothetical protein C29E4.7 in chromosome III| Length = 250 Score = 32.7 bits (73), Expect = 0.61 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 211 GAARFPAVAGRYHLYVSYACPWASRCLAYLKLKGLD 318 G A P G + +Y CPWA R + Y+ KG++ Sbjct: 14 GDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIE 49
>GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (Glutathione-dependent dehydroascorbate reductase) Length = 241 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 327 P G+ +Y CP+A R L LK KG+ H I Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI 51
>GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (p28) Length = 240 Score = 30.4 bits (67), Expect = 3.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 226 PAVAGRYHLYVSYACPWASRCLAYLKLKGLDHAI 327 P G+ +Y CP+A R L LK KG+ H + Sbjct: 18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV 51
>GLRX2_SYNY3 (P73492) Probable glutaredoxin ssr2061| Length = 88 Score = 28.9 bits (63), Expect = 8.9 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 229 AVAGRYHLYVSYACPWASRCLAYLKLKGLD 318 AV+ + +Y CP+ R LA LK KG++ Sbjct: 2 AVSAKIEIYTWSTCPFCMRALALLKRKGVE 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,597,692 Number of Sequences: 219361 Number of extensions: 596364 Number of successful extensions: 2493 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2355 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2491 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)