Clone Name | bart36f07 |
---|---|
Clone Library Name | barley_pub |
>SDF2_ARATH (Q93ZE8) Stromal cell-derived factor 2-like protein precursor| (SDF2-like protein) Length = 218 Score = 66.2 bits (160), Expect = 5e-11 Identities = 32/42 (76%), Positives = 34/42 (80%) Frame = +2 Query: 401 SQSYAADLDTAVEISYGSVIKLMHERTKFRLHSHDVPYGSGS 526 S S AA VEI+YGS IKLMHE+TKFRLHSHDVPYGSGS Sbjct: 24 SASAAASGKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGS 65
>SDF2_MOUSE (Q9DCT5) Stromal cell-derived factor 2 precursor (SDF-2)| Length = 211 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = +2 Query: 440 ISYGSVIKLMHERTKFRLHSHDVPYGSGS 526 ++ GSV+KL++ R RLHSHDV YGSGS Sbjct: 24 VTCGSVVKLLNTRHNVRLHSHDVRYGSGS 52
>SDF2L_MOUSE (Q9ESP1) Stromal cell-derived factor 2-like protein 1 precursor| (SDF2-like protein 1) Length = 221 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/41 (48%), Positives = 28/41 (68%) Frame = +2 Query: 404 QSYAADLDTAVEISYGSVIKLMHERTKFRLHSHDVPYGSGS 526 +S A +A ++ GSV+KL++ K RLHSHD+ YGSGS Sbjct: 24 RSGGASKASAGLVTCGSVLKLLNTHHKVRLHSHDIKYGSGS 64
>SDF2L_HUMAN (Q9HCN8) Stromal cell-derived factor 2-like protein 1 precursor| (SDF2-like protein 1) (PWP1-interacting protein 8) Length = 221 Score = 40.0 bits (92), Expect = 0.004 Identities = 16/29 (55%), Positives = 23/29 (79%) Frame = +2 Query: 440 ISYGSVIKLMHERTKFRLHSHDVPYGSGS 526 ++ GSV+KL++ + RLHSHD+ YGSGS Sbjct: 36 VTCGSVLKLLNTHHRVRLHSHDIKYGSGS 64
>SDF2_HUMAN (Q99470) Stromal cell-derived factor 2 precursor (SDF-2)| Length = 211 Score = 39.3 bits (90), Expect = 0.007 Identities = 17/29 (58%), Positives = 22/29 (75%) Frame = +2 Query: 440 ISYGSVIKLMHERTKFRLHSHDVPYGSGS 526 ++ GSV+KL++ R RLHSHDV YGS S Sbjct: 24 VTCGSVVKLLNTRHNVRLHSHDVRYGSSS 52
>PMT6_YEAST (P42934) Dolichyl-phosphate-mannose--protein mannosyltransferase 6| (EC 2.4.1.109) Length = 759 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 434 VEISYGSVIKLMHERTKFRLHSHDVP 511 + I+ G ++L H+ T LHSHDVP Sbjct: 412 IPITDGVEVRLSHKNTGSNLHSHDVP 437 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,576,613 Number of Sequences: 219361 Number of extensions: 548654 Number of successful extensions: 1267 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1267 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)