Clone Information

BLAST Search Result

Clone Name	bart36e10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WDR8_MOUSE (Q9JM98) WD-repeat protein 8	169	5e-42
2	WDR8_HUMAN (Q9P2S5) WD-repeat protein 8	166	4e-41
3	TUP1_CANAL (P56093) Transcriptional repressor TUP1	42	0.001
4	TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (...	37	0.029
5	HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (...	36	0.084
6	CREC_EMENI (Q9P4R5) Catabolite repression protein creC	36	0.084
7	WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting prote...	35	0.14
8	WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting prote...	35	0.14
9	RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblasto...	35	0.14
10	RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblas...	35	0.19
11	RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblas...	35	0.19
12	RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
13	RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
14	RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
15	RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
16	RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
17	RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblasto...	35	0.19
18	TUP1_KLULA (P56094) Transcriptional repressor TUP1	35	0.19
19	RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblasto...	35	0.19
20	RBBP7_RAT (Q71UF4) Histone-binding protein RBBP7 (Retinoblastoma...	34	0.24
21	RBBP7_MOUSE (Q60973) Histone-binding protein RBBP7 (Retinoblasto...	34	0.24
22	RBBP7_MACFA (Q4R304) Histone-binding protein RBBP7 (Retinoblasto...	34	0.24
23	RBBP7_HUMAN (Q16576) Histone-binding protein RBBP7 (Retinoblasto...	34	0.24
24	RBBP7_BOVIN (Q3SWX8) Histone-binding protein RBBP7 (Retinoblasto...	34	0.24
25	RBBP7_CHICK (Q9I8G9) Histone-binding protein RBBP7 (Retinoblasto...	34	0.32
26	RBBP7_XENTR (Q6P315) Histone-binding protein RBBP7 (Retinoblasto...	34	0.32
27	RBBP7_XENLA (Q8AVH1) Histone-binding protein RBBP7 (Retinoblasto...	34	0.32
28	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	34	0.32
29	WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)	33	0.41
30	LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Ab...	33	0.41
31	WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting prote...	33	0.41
32	CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chrom...	33	0.41
33	WDR17_HUMAN (Q8IZU2) WD-repeat protein 17	33	0.71
34	EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi	33	0.71
35	TAF5_SCHPO (O13282) Transcription initiation factor TFIID subuni...	33	0.71
36	PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucl...	33	0.71
37	TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transduc...	33	0.71
38	WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 ...	32	0.92
39	WDR20_MOUSE (Q9D5R2) WD-repeat protein 20	32	0.92
40	UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 1...	32	0.92
41	WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B	32	1.2
42	PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog	32	1.2
43	MSI2_ARATH (O22468) WD-40 repeat protein MSI2	32	1.2
44	RBBP7_PONPY (Q5R654) Histone-binding protein RBBP7 (Retinoblasto...	32	1.2
45	KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Kat...	32	1.6
46	TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transdu...	31	2.1
47	WD51B_PONPY (Q5RD06) WD-repeat protein 51B	31	2.1
48	WDR26_MOUSE (Q8C6G8) WD-repeat protein 26	31	2.1
49	WDR26_HUMAN (Q9H7D7) WD-repeat protein 26	31	2.1
50	WD51B_HUMAN (Q8TC44) WD-repeat protein 51B	31	2.1
51	KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Kat...	31	2.7
52	IKI3_YEAST (Q06706) Elongator complex protein 1 (Gamma-toxin tar...	31	2.7
53	PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog	31	2.7
54	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	31	2.7
55	WSB1_FUGRU (Q9W5Z5) WD repeat and SOCS box-containing protein 1 ...	31	2.7
56	UTP15_BRARE (Q7ZW33) U3 small nucleolar RNA-associated protein 1...	30	3.5
57	UTP15_XENLA (Q7ZXZ2) U3 small nucleolar RNA-associated protein 1...	30	3.5
58	MEX1_ORYSA (Q7XTQ5) Maltose excess protein 1-like, chloroplast p...	30	3.5
59	ADG3_SCHPO (O74851) Protein adg3 precursor	30	3.5
60	TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transdu...	30	4.6
61	TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Trans...	30	4.6
62	TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Trans...	30	4.6
63	FAN_MOUSE (O35242) Protein FAN (Factor associated with N-SMase a...	30	4.6
64	AAAS_MOUSE (P58742) Aladin (Adracalin)	30	4.6
65	MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7....	30	6.0
66	TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-a...	30	6.0
67	UTP15_CHICK (Q5F3D7) U3 small nucleolar RNA-associated protein 1...	30	6.0
68	AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)	30	6.0
69	YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4	29	7.8
70	WSB1_MOUSE (O54927) WD repeat and SOCS box-containing protein 1 ...	29	7.8
71	MSI3_ARATH (O22469) WD-40 repeat protein MSI3	29	7.8
72	DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing pr...	29	7.8
73	NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (...	29	7.8
74	WDR75_HUMAN (Q8IWA0) WD-repeat protein 75	29	7.8
75	HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (...	29	7.8
76	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	29	7.8
77	DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing pr...	29	7.8

>WDR8_MOUSE (Q9JM98) WD-repeat protein 8|
          Length = 462

 Score =  169 bits (428), Expect = 5e-42
 Identities = 75/138 (54%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = +1

Query: 148 MEFTEAYKQTGPCC-FSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDS 324
           M F+E++K +G  C FSPD + LA  V YRLVIRDV TL+++QL++C+D+I  +EW+ DS
Sbjct: 1   MNFSESFKLSGLLCRFSPDGKYLASCVQYRLVIRDVTTLQILQLYTCLDQIQHIEWSADS 60

Query: 325 EYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWS 504
            +ILC +Y+R +VQ WSL QP+W CKIDEGSAG+  + WSPD RHIL T+EF LR+TVWS
Sbjct: 61  LFILCAMYRRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS 120

Query: 505 LVNTACVHVQWPKHAARG 558
           L   +  ++++PK   +G
Sbjct: 121 LCTKSVSYIKYPKACQQG 138

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>WDR8_HUMAN (Q9P2S5) WD-repeat protein 8|
          Length = 460

 Score =  166 bits (420), Expect = 4e-41
 Identities = 74/138 (53%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
 Frame = +1

Query: 148 MEFTEAYKQTGPCC-FSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDS 324
           M F+E +K +   C FSPD + LA  V YRLV+RDV TL+++QL++C+D+I  +EW+ DS
Sbjct: 1   MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLYTCLDQIQHIEWSADS 60

Query: 325 EYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWS 504
            +ILC +YKR +VQ WSL QP+W CKIDEGSAG+  + WSPD RHIL T+EF LR+TVWS
Sbjct: 61  LFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS 120

Query: 505 LVNTACVHVQWPKHAARG 558
           L   +  ++++PK   +G
Sbjct: 121 LCTKSVSYIKYPKACLQG 138

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>TUP1_CANAL (P56093) Transcriptional repressor TUP1|
          Length = 514

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
 Frame = +1

Query: 187 CFSPDARLLAVAVDYRLV-IRDVVTLKVVQLFSCVDK-INFLEWAPDSEYILCGLYKRPM 360
           CFSPD +LLA   + +L+ I D+ T +++++    ++ I  L++ PD + ++ G   R  
Sbjct: 264 CFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR-S 322

Query: 361 VQAWSL--SQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
           V+ W L  SQ   T  I++G   +A    SPD + ++        + VW
Sbjct: 323 VRIWDLRTSQCSLTLSIEDGVTTVAV---SPDGK-LIAAGSLDRTVRVW 367

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>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation|
           suppressor protein) (Repressor AER2)
          Length = 713

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
 Frame = +1

Query: 187 CFSPDARLLAVAVDYRLV-IRDVVTLKVVQLFSCVDK-INFLEWAPDSEYILCGLYKRPM 360
           CFSPD + LA   + RL+ I D+   K+V +    ++ I  L++ P  + ++ G   R  
Sbjct: 450 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR-T 508

Query: 361 VQAWSL--SQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
           V+ W L   Q   T  I++G   +A    SP     +        + VW
Sbjct: 509 VRIWDLRTGQCSLTLSIEDGVTTVAV---SPGDGKYIAAGSLDRAVRVW 554

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>HAT2_SCHPO (O94244) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 430

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
 Frame = +1

Query: 199 DARLLAVAVDYRLVIRDV------VTLKVVQLFSCVDKINFLEWAPDSEYILCGLYKRPM 360
           +A L +V+ D  L I D          KV+Q  S    IN +   P ++Y+L        
Sbjct: 248 EALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHS--KAINAVAINPFNDYLLATASADKT 305

Query: 361 VQAWSLSQPDWTCKIDEGSAGIAYA-RWSPDSRHILTTSEFQLRLTVWSL 507
           V  W L  P       EG     Y   WSP    IL +S    R+ +W L
Sbjct: 306 VALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355

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>CREC_EMENI (Q9P4R5) Catabolite repression protein creC|
          Length = 630

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
 Frame = +1

Query: 190 FSPDARLLAVAV-DYRLVIRDVVTLKVVQLF-SCVDKINFLEWAPDSEYILCGLYKRPMV 363
           FSPD R LAV + D  L + D +  +V+ +F S       + W+PD +YI+ G  +  +V
Sbjct: 375 FSPDHRHLAVVLEDGTLRLMDYLQEEVLDVFRSYYGGFTCVCWSPDGKYIVTG-GQDDLV 433

Query: 364 QAWSLSQPDWTCKI---DEGSAGIAYARWSPDSR 456
             WSL +     +    D   + +A+  W  D R
Sbjct: 434 TIWSLPERKIIARCQGHDSWVSAVAFDPWRCDER 467

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>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)|
          Length = 605

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
 Frame = +1

Query: 262 KVVQLFSCVD-------------KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCK 402
           KVV +FS  D             KI  L W+PD+E+   G     MV  W+LS P+   K
Sbjct: 510 KVVTVFSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDM-MVYVWTLSDPETKVK 568

Query: 403 IDEGSA--GIAYARWSPDSRHILTTSEFQLRLTVWSL 507
           I +      ++   W  +  H L T+     +  W++
Sbjct: 569 IQDAHRLHHVSSLAWLDE--HTLVTTSHDASVKEWTI 603

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>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)|
           (NORI-1)
          Length = 605

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
 Frame = +1

Query: 262 KVVQLFSCVD-------------KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCK 402
           KVV +FS  D             KI  L W+PD+E+   G     MV  W+LS P+   K
Sbjct: 510 KVVTVFSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDM-MVYVWTLSDPETRVK 568

Query: 403 IDEGSA--GIAYARWSPDSRHILTTSEFQLRLTVWSL 507
           I +      ++   W  +  H L T+     +  W++
Sbjct: 569 IQDAHRLHHVSSLAWLDE--HTLVTTSHDASVKEWTI 603

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>RBBP4_BRARE (Q6P3H7) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 423

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 10/43 (23%), Positives = 25/43 (58%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSA 420
           KI+   W P+  +++C + +  ++Q W +++  +  +  EG+A
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAA 417

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>RBP4B_XENLA (Q6INH0) Histone-binding protein RBBP4-B (Retinoblastoma-binding|
           protein 4-B) (RBBP-4-B) (Retinoblastoma-binding protein
           p48-B)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGS 417
           KI+   W P+  +++C + +  ++Q W +++  +  +  EGS
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGS 416

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>RBP4A_XENLA (O93377) Histone-binding protein RBBP4-A (Retinoblastoma-binding|
           protein 4-A) (RBBP-4-A) (Retinoblastoma-binding protein
           p48-A)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346

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>RBBP4_XENTR (Q5M7K4) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346

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>RBBP4_PONPY (Q5RF92) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGS 417
           KI+   W P+  +++C + +  ++Q W +++  +  +  EGS
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 416

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>RBBP4_MOUSE (Q60972) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGS 417
           KI+   W P+  +++C + +  ++Q W +++  +  +  EGS
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 416

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>RBBP4_HUMAN (Q09028) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGS 417
           KI+   W P+  +++C + +  ++Q W +++  +  +  EGS
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 416

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>RBBP4_CHICK (Q9W7I5) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4) (Retinoblastoma-binding protein p48)
           (Chromatin assembly factor 1 subunit C) (CAF-1 subunit
           C) (Chromatin assembly factor I p48 subunit) (CAF-I 48
           kDa subunit)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346

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>RBBP4_BOVIN (Q3MHL3) Histone-binding protein RBBP4 (Retinoblastoma-binding|
           protein 4) (RBBP-4)
          Length = 424

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 346



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGS 417
           KI+   W P+  +++C + +  ++Q W +++  +  +  EGS
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 416

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>TUP1_KLULA (P56094) Transcriptional repressor TUP1|
          Length = 682

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
 Frame = +1

Query: 106 SRDDQGGGAERVGGMEFTEAYKQTGPCCFSPDARLLAVAVDYRLV-IRDVVTLKVVQLFS 282
           S +D  G          ++ Y ++   CFSPD + LA   + +L+ I D+ T K+V    
Sbjct: 388 SAEDGTGNQNSAASTASSDLYIRS--VCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLK 445

Query: 283 CVDK-INFLEWAPDSEYILCGLYKRPMVQAWSLSQP--DWTCKIDEGSAGIAYARWSPDS 453
             ++ I  L++ P    ++ G   R  V+ W L+      T  I++G   +A    SP  
Sbjct: 446 GHEQDIYSLDYFPSGNKLVSGSGDR-TVRIWDLTTGTCSLTLSIEDGVTTVAV---SPGE 501

Query: 454 RHILTTSEFQLRLTVW 501
              +        + VW
Sbjct: 502 GKFIAAGSLDRTVRVW 517

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>RBBP7_BRARE (Q7ZTY4) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 426

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347

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>RBBP7_RAT (Q71UF4) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_MOUSE (Q60973) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
           (Histone acetyltransferase type B subunit 2)
          Length = 425

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_MACFA (Q4R304) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_HUMAN (Q16576) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
           (Histone acetyltransferase type B subunit 2)
          Length = 425

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_BOVIN (Q3SWX8) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_CHICK (Q9I8G9) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)
          Length = 424

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 243 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 302

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 303 NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345

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>RBBP7_XENTR (Q6P315) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>RBBP7_XENLA (Q8AVH1) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 425

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = +1

Query: 190  FSPDARLLA-VAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGLYKRPMVQ 366
            FSP+  L+A V+ D+   + D     V  L+     +  ++W+PD + ++         +
Sbjct: 1555 FSPEGNLIATVSADHTARLWDRSGKTVAVLYGHQGLVGTVDWSPDGQMLVTAS-NDGTAR 1613

Query: 367  AWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTS 474
             W LS  +       G+  +  A +SPD R +LT+S
Sbjct: 1614 LWDLSGRELLTLEGHGN-WVRSAEFSPDGRWVLTSS 1648

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>WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)|
          Length = 569

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +1

Query: 295 INFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTS 474
           +N   ++PD +++ C + +   ++ ++    +    +     G+    WSPD ++I+T  
Sbjct: 223 LNEFAFSPDGKFLAC-VSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGG 281

Query: 475 EFQLRLTVWSLVNTACV-----HVQW 537
           E  L +TVWS V+   +     H  W
Sbjct: 282 EDDL-VTVWSFVDCRVIARGHGHKSW 306

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>LIN53_CAEEL (P90916) Probable histone-binding protein lin-53 (Abnormal cell|
           lineage protein 53)
          Length = 417

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +V  D +L+I DV T        C+D    ++N L + P SE+IL        V  W L 
Sbjct: 240 SVGDDKKLLIWDVRTSTPGH---CIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339

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>WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)|
          Length = 609

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 28/157 (17%)
 Frame = +1

Query: 121 GGGAERVGGMEFT-EAYKQTGPCCFSPDARL--------LAVAVDYR-LVIRDVVTLKVV 270
           GGG+  VGG +     Y   G    S D  L        LA + D   L + D    KVV
Sbjct: 458 GGGSVAVGGTDGNVRLYSIQGTSLKSDDKTLEAKGPVTDLAYSHDGAFLAVCDAN--KVV 515

Query: 271 QLFSCVD-------------KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDE 411
            +FS  D             K+  + W+PD+E+   G     MV  W++S P+   KI +
Sbjct: 516 TVFSVPDGYVEHNVFYGHHAKVVCIAWSPDNEHFASGGMDM-MVYVWTVSDPETRIKIPD 574

Query: 412 GS-----AGIAYARWSPDSRHILTTSEFQLRLTVWSL 507
                  +G+A+        H L T+     +  WS+
Sbjct: 575 AHRLHHVSGLAWL-----DEHTLVTTSHDASVKEWSI 606

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>CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chromatin assembly|
           factor 1 p55 subunit) (CAF-1 p55 subunit) (dCAF-1)
           (Nucleosome remodeling factor 55 kDa subunit) (NURF-55)
          Length = 430

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L+I D       +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 308

Query: 382 QPDWTCKIDEGSAG-IAYARWSPDSRHILTTSEFQLRLTVWSL 507
                    E     I   +WSP +  IL +S    RL VW L
Sbjct: 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351

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>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17|
          Length = 1322

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 17/78 (21%), Positives = 34/78 (43%)
 Frame = +1

Query: 292 KINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTT 471
           K+  ++W+P  E ILC       V+ W  +Q      ++  +A +    W+ +  ++L +
Sbjct: 568 KVFHVKWSPLREGILCSGSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLIS 627

Query: 472 SEFQLRLTVWSLVNTACV 525
             +   + VW      CV
Sbjct: 628 GSWDYTIKVWDTREGTCV 645

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>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P  + +L        ++ WS+++      +   S  I   +WSP       
Sbjct: 535 NEVNAIKWCPQGQ-LLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNN 593

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            ++  IL ++ F   + +W +   +C+H
Sbjct: 594 PNTNLILASASFDSTVRLWDVERGSCIH 621

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>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLY------------KRPMVQAWSLSQPDWTCKIDEGSAGIAY 432
           + +N  E++PDS  I CG              K+ + ++ S+   D + ++   S  +  
Sbjct: 325 NNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYG 384

Query: 433 ARWSPDSRHILTTSEFQLRLTVWSLVNTACVHVQWPKH 546
             +SPD++++L+ SE      +WS V+T    V +  H
Sbjct: 385 TTFSPDNKYLLSCSE-DASARLWS-VDTKTALVAYKGH 420

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>PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucleolar|
           RNA-associated protein 1) (U3 snoRNA-associated protein
           1)
          Length = 923

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
 Frame = +1

Query: 208 LLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCG------LYKRPMVQA 369
           L+++  D R ++ +     V+  F+  +K + ++++PD             ++K P V  
Sbjct: 70  LISIDEDGRAILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQIWKTPDVNK 129

Query: 370 WSLSQPDWTCKIDEGS-AGIAYARWSPDSRHILTTSEFQLRLTVWSL 507
                P    ++  G    I    WS DSR ILTTS+  L   +WS+
Sbjct: 130 DRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSK-DLSAKIWSV 175

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>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein)
          Length = 527

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P S  +L        ++ WS+ Q      +   S  I   +WSP       
Sbjct: 363 NEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSN 421

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            +S  +L ++ F   + +W +    C+H
Sbjct: 422 PNSNIMLASASFDSTVRLWDVERGVCIH 449

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>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +1

Query: 190 FSPDARLLAVAVDY-RLVIRDVVTLKVV-QLFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
           F  D  LLA  ++  R+ I DV T K++  L    + +  L +APD   IL    +   +
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYA-RWSPDS 453
           + W L       K+  G     Y+  +SPDS
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDS 226

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>WDR20_MOUSE (Q9D5R2) WD-repeat protein 20|
          Length = 567

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +1

Query: 295 INFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTS 474
           +N   ++PD +++ C + +   ++ ++    +    +     G+    WSPD ++I+T  
Sbjct: 221 LNEFAFSPDGKFLAC-VSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGG 279

Query: 475 EFQLRLTVWSLVNTACV-----HVQW 537
           E  L +TVWS ++   +     H  W
Sbjct: 280 EDDL-VTVWSFLDCRVIARGRGHKSW 304

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>UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 515

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +1

Query: 175 TGPCCFSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGL 345
           T  C  S   RLL+ ++D  + +   +  KVV  F     I  L  APD + I+ G+
Sbjct: 252 TSLCLSSSGQRLLSASLDRHVKVYSTMNYKVVHSFDYAASILSLALAPDDQMIVVGM 308

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>WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B|
          Length = 476

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
 Frame = +1

Query: 190 FSPDARLLAVAVDYRLVIRDVVTLK--VVQLFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
           FSP   LLA A   R V   V+  K    +  +    +  ++++ D + ++     +  +
Sbjct: 68  FSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKS-I 126

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVH 528
           + WS+ +  +   +   +  +  A++SPD R I++ SE    + +W   N  CV+
Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE-DKTIKIWDTTNKQCVN 180

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>PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog|
          Length = 899

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
 Frame = +1

Query: 208 LLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGLYKRPMVQAWSL-SQ 384
           LL++  D + ++ +V    V+  FS    +  L ++P   + + GL ++  ++ W + S 
Sbjct: 70  LLSIDEDGQAILTNVPRRVVLYHFSFKAPVTALSFSPSGRHFIVGLGRK--IEVWHVPST 127

Query: 385 PDWTCKIDEGSA-------------GIAYARWSPDSRHILTTSEFQLRLTVWSL 507
           PD     +   A              + +  WS DSR  LT+S+  L   +WS+
Sbjct: 128 PDANADGELEFAPFVKHHTHVQHFDDVRHIEWSHDSRFFLTSSK-DLTARIWSV 180

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>MSI2_ARATH (O22468) WD-40 repeat protein MSI2|
          Length = 415

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +1

Query: 226 DYRLVIRDVVTLKVVQLFSCVDK-INFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCK 402
           D RLVI D  T ++       ++ +N+L + P +E++L        V  + L + +    
Sbjct: 239 DGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLH 298

Query: 403 IDEGSAGIAY-ARWSPDSRHILTTSEFQLRLTVWSL 507
           +     G  +   W P+   +L +S    RL VW L
Sbjct: 299 VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334

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>RBBP7_PONPY (Q5R654) Histone-binding protein RBBP7 (Retinoblastoma-binding|
           protein 7) (RBBP-7)
          Length = 426

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
 Frame = +1

Query: 214 AVAVDYRLVIRDVVTLKVVQLFSCVD----KINFLEWAPDSEYILCGLYKRPMVQAWSLS 381
           +VA D +L++ D  +    +    VD    ++N L + P SE+IL        V  W L 
Sbjct: 244 SVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303

Query: 382 QPDWTCKIDEGSAGIAY--ARWSPDSRHILTTSEFQLRLTVWSL 507
                    E      +    WSP +  IL +S    RL VW L
Sbjct: 304 NLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDL 347

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>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 657

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
 Frame = +1

Query: 190 FSPDARLLAVAVDYRLV-IRDVVTLKVVQLFSCVD-KINFLEWAPDSEYILCGLYKRPMV 363
           FSPD + LA A D   V + D+   KV+  F+     +N +E+ P SEY+L        +
Sbjct: 154 FSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP-SEYLLASGSSDRTI 212

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
           + W L +      I+E +  +    ++PD   +    +  LR+  W
Sbjct: 213 RFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGW 258

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>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like|
           1Y protein) (Transducin-beta-like 1, Y-linked)
          Length = 522

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P S  +L        ++ WS+ Q      +   S  I   +WSP       
Sbjct: 360 NEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSN 418

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            +S  +L ++ F   + +W +    C H
Sbjct: 419 PNSSIMLASASFDSTVRLWDVEQGVCTH 446

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>WD51B_PONPY (Q5RD06) WD-repeat protein 51B|
          Length = 451

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
 Frame = +1

Query: 190 FSPDARLLAVAVDYRLVIRDVVTL--KVVQLFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
           FSP   LLA A   R V   +     K  +  +    +  ++++ D +++      +  +
Sbjct: 68  FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS-I 126

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVH 528
           + WS+ +  +   +   +  +  A++SPD R I++ SE    + +W   N  CV+
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE-DKTIKIWDTTNKQCVN 180

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>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26|
          Length = 514

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
 Frame = +1

Query: 157 TEAYKQTGPCCFSPDARLLAVAVDYRLVI-----RDVVTLKVVQ-LFSCVDKINFLEWAP 318
           TE   +   C FS D   LA       VI      D   LK+++ L      ++++ W+P
Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP 264

Query: 319 DSEYIL-CGLYKRPMVQAWSLSQPDWTCKIDEG-SAGIAYARWSPDSRHILT 468
           D  Y++ CG      +  W++   +   K+ +     +    W+PD +  +T
Sbjct: 265 DDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 316

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>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26|
          Length = 514

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
 Frame = +1

Query: 157 TEAYKQTGPCCFSPDARLLAVAVDYRLVI-----RDVVTLKVVQ-LFSCVDKINFLEWAP 318
           TE   +   C FS D   LA       VI      D   LK+++ L      ++++ W+P
Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP 264

Query: 319 DSEYIL-CGLYKRPMVQAWSLSQPDWTCKIDEG-SAGIAYARWSPDSRHILT 468
           D  Y++ CG      +  W++   +   K+ +     +    W+PD +  +T
Sbjct: 265 DDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 316

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>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B|
          Length = 478

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
 Frame = +1

Query: 190 FSPDARLLAVAVDYRLVIRDVVTL--KVVQLFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
           FSP   LLA A   R V   +     K  +  +    +  ++++ D +++      +  +
Sbjct: 68  FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS-I 126

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVH 528
           + WS+ +  +   +   +  +  A++SPD R I++ SE    + +W   N  CV+
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE-DKTIKIWDTTNKQCVN 180

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>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 690

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +1

Query: 190 FSPDARLLAVAV-DYRLVIRDVVTLKVVQLF-SCVDKINFLEWAPDSEYILCGLYKRPMV 363
           FSPD + L  A  D  + + D+   K+ Q F +    +  +E+ P+ E++L        V
Sbjct: 151 FSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPN-EFLLASGSSDRTV 209

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
           Q W L           G++ +    + PD  ++  +S+  L    W
Sbjct: 210 QFWDLETFQLVSSTSPGASAVRSISFHPDGSYLFCSSQDMLHAFGW 255

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>IKI3_YEAST (Q06706) Elongator complex protein 1 (Gamma-toxin target 1)|
           (Protein IKI3)
          Length = 1349

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILT 468
           +K+  + W  +SE +   L  R  +Q W+     W  K +  ++ I+Y +W P+    L 
Sbjct: 355 EKVESVCWNSNSEALAVVLANR--IQLWTSKNYHWYLKQELYASDISYVKWHPEKDFTLM 412

Query: 469 TSE 477
            S+
Sbjct: 413 FSD 415

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>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog|
          Length = 854

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
 Frame = +1

Query: 160 EAYKQTGPCCFSPDARLL-AVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYIL 336
           E +K       SP + LL +V  + R ++ + +   V+  F+    +  +E++P+ ++  
Sbjct: 53  ENHKNISHIALSPTSTLLLSVDEEGRCILCNFLRRSVLHYFNFKSPVGAIEFSPNGKFFA 112

Query: 337 CGLYKRPMVQAW----SLSQPD---------WTCKIDEGSAGIAYARWSPDSRHILTTSE 477
             L K  ++Q W    SL + +         +T   D+    I    WS DSR  ++TS+
Sbjct: 113 VSLGK--LIQVWRTPNSLEEREFAPFVLHREYTGHFDD----IVSISWSADSRFFISTSK 166

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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
 Frame = +1

Query: 190  FSPDARLLAVA-VDYRLVIRDVVTLKVVQ-LFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
            FSPD++ LA A  D  + + ++ T +  Q L    D +  + + P  + I  G      V
Sbjct: 986  FSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCT-V 1044

Query: 364  QAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVHV 531
            + W++S       + E S  I    WSPD + +L ++     + +W      CV +
Sbjct: 1045 KLWNISTGQCLKTLSEHSDKILGMAWSPDGQ-LLASASADQSVRLWDCCTGRCVGI 1099

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>WSB1_FUGRU (Q9W5Z5) WD repeat and SOCS box-containing protein 1 (WSB-1)|
          Length = 427

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
 Frame = +1

Query: 190 FSPDARLLAVAV--DYRLVIRDVVT--LKVVQLFSCVDKINFLEWAPDSEYILCGLYKRP 357
           F+PD  L+ V+   D +L + D+      V  L+   +++    ++PDS  +LC +    
Sbjct: 183 FAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSS-VLCSVGASK 241

Query: 358 MVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
            V  W++ +     K++     +    +SPD    L T+ +  R+ VW
Sbjct: 242 AVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGAL-LATASYDTRVIVW 288

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>UTP15_BRARE (Q7ZW33) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 517

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 166 YKQTGPCCFSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGL 345
           +K     C S   +LL  ++D  + + +  + KVV  F C   I  L  APD E +  G+
Sbjct: 248 HKTVTCACLSSSNKLLTASLDRHVKVYNS-SYKVVHNFDCASSILSLAVAPDDEAVAVGM 306

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>UTP15_XENLA (Q7ZXZ2) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 515

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 184 CCFSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGL 345
           C  S   RLL+ ++D  + +   +  KVV  F     I  L  APD + I+ G+
Sbjct: 255 CLSSSGQRLLSGSLDRHVKVYSTMNYKVVHSFDYAASILSLALAPDDQMIVVGM 308

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>MEX1_ORYSA (Q7XTQ5) Maltose excess protein 1-like, chloroplast precursor|
          Length = 399

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 12/46 (26%)
 Frame = -3

Query: 164 ASVNSIP-PTRSAPPPWSSREWRGEGGLK-----------ACRSPA 63
           +SV+S+  P R+APP +  REWR +G              +CR+PA
Sbjct: 3   SSVSSVRLPLRAAPPLYGRREWRADGARAPSPALVAVKPLSCRAPA 48

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>ADG3_SCHPO (O74851) Protein adg3 precursor|
          Length = 1131

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -3

Query: 161 SVNSIPPTRSAPPPWSSREWRGEGGLKACRSPAYCS 54
           +VNS+ P+ S   P SS    G   LK   SPAY S
Sbjct: 637 NVNSVGPSSSQTTPTSSSSITGSQSLKETSSPAYVS 672

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>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein) (Transducin-beta-like 1, X-linked) (SMAP55)
          Length = 526

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P S  +L        ++ WS+ Q      +   +  I   +WSP       
Sbjct: 362 NEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSN 420

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            +S  +L ++ F   + +W +    C H
Sbjct: 421 PNSNIMLASASFDSTVRLWDIERGVCTH 448

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>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like|
           1X-related protein 1) (Nuclear receptor
           corepressor/HDAC3 complex subunit TBLR1) (TBL1-related
           protein 1)
          Length = 514

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P    +L        ++ WS+ Q +    +   +  I   +WSP       
Sbjct: 350 NEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            ++  +L ++ F   + +W +    C+H
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIH 436

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>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like|
           1X-related protein 1) (Nuclear receptor
           corepressor/HDAC3 complex subunit TBLR1) (TBL1-related
           protein 1)
          Length = 514

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
 Frame = +1

Query: 289 DKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSP------- 447
           +++N ++W P    +L        ++ WS+ Q +    +   +  I   +WSP       
Sbjct: 350 NEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNN 408

Query: 448 -DSRHILTTSEFQLRLTVWSLVNTACVH 528
            ++  +L ++ F   + +W +    C+H
Sbjct: 409 PNANLMLASASFDSTVRLWDVDRGICIH 436

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>FAN_MOUSE (O35242) Protein FAN (Factor associated with N-SMase activation)|
           (Factor associated with neutral sphingomyelinase
           activation)
          Length = 920

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 349 KRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTT 471
           K  MV  W L+      +    S  +  A +SPDSRHIL+T
Sbjct: 786 KEGMVNIWDLTTATLLHQTSCHSGTVCDAAFSPDSRHILST 826

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>AAAS_MOUSE (P58742) Aladin (Adracalin)|
          Length = 546

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/87 (22%), Positives = 32/87 (36%)
 Frame = +1

Query: 295 INFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTS 474
           +  L WAP+  ++L       ++  W +S             G+    WSPD   +L T+
Sbjct: 247 VTSLAWAPNGGWLLSASPVDAVILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATT 306

Query: 475 EFQLRLTVWSLVNTACVHVQWPKHAAR 555
              +   VW      C    WP  + R
Sbjct: 307 PSAV-FRVWEAQMWTC--EAWPTLSGR 330

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>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 7)
          Length = 549

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +1

Query: 205 RLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGLYKRPMVQAWSLSQ 384
           RLLA A D RL     +    VQ F C D+    EWA +S+  L      P+ +   LS 
Sbjct: 284 RLLAFAPDKRLSAEQALQHPYVQRFHCPDR----EWARESDVRL------PVHEGDQLSA 333

Query: 385 PDW 393
           P++
Sbjct: 334 PEY 336

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>TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-associated|
            protein 1) (Telomerase protein 1) (p240) (p80 homolog)
          Length = 2629

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 166  YKQTGPCCFSPDARLLA-VAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCG 342
            Y+ TG CC SPD RLLA V +   L + D V  ++   ++    +N + + P+ + +  G
Sbjct: 1767 YQITG-CCLSPDRRLLATVCLGGYLKLWDTVRGQLAFQYTHPKSLNCVAFHPEGQVVATG 1825

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>UTP15_CHICK (Q5F3D7) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 520

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 184 CCFSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCVDKINFLEWAPDSEYILCGL 345
           C  S   RLL+ ++D  + I    + KVV  F+    I  L  +P+ E I+ G+
Sbjct: 255 CLNSSGQRLLSGSLDRHVKIYSTTSYKVVHSFNYATSILSLALSPEDETIIVGM 308

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>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)|
          Length = 546

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/87 (24%), Positives = 31/87 (35%)
 Frame = +1

Query: 295 INFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTS 474
           +  L WAP    +L        ++ W +S             G+    WSPD   IL T+
Sbjct: 247 VTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATT 306

Query: 475 EFQLRLTVWSLVNTACVHVQWPKHAAR 555
              +   VW      C   +WP  + R
Sbjct: 307 PSAV-FRVWEAQMWTC--ERWPTLSGR 330



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
 Frame = +1

Query: 304 LEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEGSAGI---------AYARWSPDSR 456
           L W P S  +L  +  +  +  W+L     + +   G A +             W+P   
Sbjct: 199 LAWKPLSASVLA-VACQSCILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGG 257

Query: 457 HILTTSEFQLRLTVWSLVNTACVHVQW 537
            +L+ S     + VW +    CV + W
Sbjct: 258 RLLSASPVDAAIRVWDVSTETCVPLPW 284

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>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4|
          Length = 395

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
 Frame = +1

Query: 184 CCFSPDARLLAVAVDYRLVIRDVVTLKVVQLFSCV---DKINFLEWAPDSEYILCGLYKR 354
           CCF+P   L+A    +   IR         +FS     D ++ + +  D  Y+  G Y  
Sbjct: 196 CCFNPSGTLIASG-SFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDG 254

Query: 355 PMVQAWSLSQPDWTCK---IDEGSAGIAYARWSPDSRHILTTSEFQLRLTVW 501
            +V+ W  +    TC    IDE    I + ++SP+ ++IL  S     L +W
Sbjct: 255 -IVRIWDSTTG--TCVKTLIDEEHPPITHVKFSPNGKYIL-ASNLNNTLKLW 302

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>WSB1_MOUSE (O54927) WD repeat and SOCS box-containing protein 1 (WSB-1)|
          Length = 421

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = +1

Query: 190 FSPDARLLAVAVDY-RLVIRDVVTLKVV-QLFSCVDKINFLEWAPDSEYILCGLYKRPMV 363
           F  D  LLA  ++  R+ I DV T K++  L   ++ +  L +APD   +L    +   +
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTL 195

Query: 364 QAWSLSQPDWTCKIDEGSAGIAYA-RWSPD 450
           + W L       K+        Y+  +SPD
Sbjct: 196 RVWDLKDDGNMVKVLRAHQNWVYSCAFSPD 225

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>MSI3_ARATH (O22469) WD-40 repeat protein MSI3|
          Length = 424

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
 Frame = +1

Query: 226 DYRLVIRDVVTLKVVQLFSCVDK-INFLEWAPDSEYILCGLYKRPMVQAWSLSQ---PDW 393
           D +LVI D+ T ++       ++ IN+L + P +E++L        V  + L +   P  
Sbjct: 240 DCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLH 299

Query: 394 TCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSL 507
                EG   +    W P+   +L +S    RL VW +
Sbjct: 300 VLSKHEGE--VFQVEWDPNHETVLASSGEDRRLMVWDI 335

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>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein) (Protein 59) (Fragment)
          Length = 553

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +1

Query: 421 GIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACV-----HVQW 537
           G+    WSPD R+++T  E  L +TVWS      V     H  W
Sbjct: 206 GLLCVCWSPDGRYVVTGGEDDL-VTVWSFTEGRVVARGHGHKSW 248

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>NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (ANAC061)|
          Length = 228

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 55  EQYAGDRQAFSPPSPLHSRDDQGGGAERVGGMEFTEAYKQTGPCCFSPDARLLAV 219
           E+  GD + +    P   R+ +GG   R  G  + +A    GP  FSPD R++ V
Sbjct: 57  ERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGP-VFSPDNRVIGV 110

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>WDR75_HUMAN (Q8IWA0) WD-repeat protein 75|
          Length = 830

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
 Frame = +1

Query: 172 QTGPCCFSPDARLLAVAVDYRLVIRDVVTLKVVQLF-SCVDKINFLEWA--PDSEYILCG 342
           Q   CCFS D  LLAV+ +  + I D VT ++   F     KI  L +     S+Y+L G
Sbjct: 500 QATNCCFSEDGSLLAVSFEEIVTIWDSVTWELKCTFCQRAGKIRHLCFGRLTCSKYLL-G 558

Query: 343 LYKRPMVQAWSL--SQPDWTCKIDEGSAGIAYARWSPDSRHILTTSE 477
             +  ++  W+L     +W  K++     +      P+S +I   S+
Sbjct: 559 ATENGILCCWNLLSCALEWNAKLN-----VRVMEPDPNSENIAAISQ 600

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>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 423

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +1

Query: 286 VDKINFLEWAPDSEYILCGLYKRPMVQAWSLSQPDWTCKIDEG-SAGIAYARWSPDSRHI 462
           +D IN L + P+SE ++        +  W L          EG +  +    W P    I
Sbjct: 273 LDAINALAFNPNSEVLVATASADKTIGIWDLRNVKEKVHTLEGHNDAVTSLAWHPTEAGI 332

Query: 463 LTTSEFQLRLTVWSL 507
           L ++ +  R+  W L
Sbjct: 333 LGSASYDRRIIFWDL 347

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>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +1

Query: 361 VQAWSLSQPDWTCKIDEGSAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVH 528
           V+ WS  +  +   + +    +  A++SPD R I++ S+    + +W   +  CVH
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD-DKTVKLWDKTSRECVH 181

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>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +1

Query: 421 GIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACV-----HVQW 537
           G+    WSPD R+++T  E  L +TVWS      V     H  W
Sbjct: 310 GLLCVCWSPDGRYVVTGGEDDL-VTVWSFTEGRVVARGHGHKSW 352


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,020,811
Number of Sequences: 219361
Number of extensions: 1417733
Number of successful extensions: 4593
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 4210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4571
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result