ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart36e07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 367 bits (185), Expect = 2e-98 Identities = 237/253 (93%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 274 gcggccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcg 333 ||||||||||||||||||| ||||||||||||||||| | ||| |||| | ||||||||| Sbjct: 1 gcggccgccacttcgtccagctccagctccgggaggatcacttggctgtcgaatcgctcg 60 Query: 334 tcgggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctg 393 ||| |||||||||||||||||| || | ||||||||||||| |||||||||||||||| Sbjct: 61 tcga-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctg 119 Query: 394 atcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtc 453 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 atcgggaacacgccgttggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtc 179 Query: 454 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagc 513 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagc 239 Query: 514 atgatcaccgacg 526 ||||||||||||| Sbjct: 240 atgatcaccgacg 252
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 361 bits (182), Expect = 2e-96 Identities = 234/250 (93%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 277 gccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcgtcg 336 |||||||||||||||| |||| ||||| | |||| | |||||||| |||||||||||||| Sbjct: 7 gccgccacttcgtccagctccggctccagaaggatcacttcgctgtcaaatcgctcgtcg 66 Query: 337 ggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctgatc 396 |||||||||||||||||| || | ||||||||||||| ||||||||||||||||||| Sbjct: 67 a-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctgatc 125 Query: 397 gggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtcgcc 456 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 126 gggaacacgccgctggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtcgcc 185 Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagcatg 516 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 186 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagcatg 245 Query: 517 atcaccgacg 526 |||||||||| Sbjct: 246 atcaccgacg 255
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 240 bits (121), Expect = 4e-60 Identities = 154/165 (93%) Strand = Plus / Plus Query: 362 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 421 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 234 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 293 Query: 422 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 481 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 294 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 353 Query: 482 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacg 526 |||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 354 gctccagcgtcaaggataggattggctacagcatgatcacggacg 398
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 232 bits (117), Expect = 9e-58 Identities = 153/165 (92%) Strand = Plus / Plus Query: 362 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 421 ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 231 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaatacgccgctggtgtacctca 290 Query: 422 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 481 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 291 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 350 Query: 482 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacg 526 |||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 351 gctccagcgtcaaggataggattggctacagcatgatcacggacg 395
>emb|AJ622893.1| Triticum durum partial mRNA for DRP6 protein (drg6 gene) Length = 466 Score = 212 bits (107), Expect = 9e-52 Identities = 110/111 (99%) Strand = Plus / Minus Query: 416 acctcaacaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 475 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 acctcaacaaggtgaccgacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 407 Query: 476 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacg 526 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacg 356
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 210 bits (106), Expect = 3e-51 Identities = 153/166 (92%), Gaps = 2/166 (1%) Strand = Plus / Plus Query: 362 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 421 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 86 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 145 Query: 422 acaaggtgacggacgggtgcgtggggcgc-gtcgccgccaagctcgagtccatggagccc 480 |||||||||| || |||||||| || ||| ||||| |||||||||||||||||||||||| Sbjct: 146 acaaggtgaccgatgggtgcgtcggccgcagtcgc-gccaagctcgagtccatggagccc 204 Query: 481 tgctccagcgtcaaggacaggattgggtacagcatgatcaccgacg 526 ||||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 205 tgctccagcgtcaaggataggattggctacagcatgatcacggacg 250
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 370 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 429 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 92 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 151 Query: 430 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 489 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 152 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 211 Query: 490 gtcaaggacaggattgggtacagcatgatcac 521 |||||||| |||||||| ||||| |||||||| Sbjct: 212 gtcaaggataggattggatacagtatgatcac 243
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 370 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 429 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 91 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 150 Query: 430 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 489 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 151 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 210 Query: 490 gtcaaggacaggattgggtacagcatgatcac 521 |||||||| |||||||| ||||| |||||||| Sbjct: 211 gtcaaggataggattggatacagtatgatcac 242
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 370 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 429 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 86 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 145 Query: 430 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 489 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 146 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 205 Query: 490 gtcaaggacaggattgggtacagcatgatcac 521 |||||||| |||||||| ||||| |||||||| Sbjct: 206 gtcaaggataggattggatacagtatgatcac 237
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 392 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 451 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26736261 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26736202 Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26736201 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26736156 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 gccgtccaggttcaacgaacgcc 94 ||||||||||||||||||||||| Sbjct: 26736820 gccgtccaggttcaacgaacgcc 26736798 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcc 242 |||||||||||||||||||||| Sbjct: 3575893 cgccgcctccgcctgctcctcc 3575872
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 392 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 451 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26664431 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26664372 Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26664371 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26664326 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 gccgtccaggttcaacgaacgcc 94 ||||||||||||||||||||||| Sbjct: 26664990 gccgtccaggttcaacgaacgcc 26664968 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcc 242 |||||||||||||||||||||| Sbjct: 3575838 cgccgcctccgcctgctcctcc 3575817
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 392 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 451 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 34863 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 34922 Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34923 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 34968 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gccgtccaggttcaacgaacgcc 94 ||||||||||||||||||||||| Sbjct: 34304 gccgtccaggttcaacgaacgcc 34326
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 392 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 451 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 62717 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 62776 Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 62777 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 62822 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gccgtccaggttcaacgaacgcc 94 ||||||||||||||||||||||| Sbjct: 62158 gccgtccaggttcaacgaacgcc 62180
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 511 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 228 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 287 Query: 512 gcatgat 518 ||||||| Sbjct: 288 gcatgat 294
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 511 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 217 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 276 Query: 512 gcatgat 518 ||||||| Sbjct: 277 gcatgat 283
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 511 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 242 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 301 Query: 512 gcatgat 518 ||||||| Sbjct: 302 gcatgat 308
>gb|AF078693.1|AF078693 Chlamydomonas reinhardtii putative O-acetylserine(thiol)lyase precursor (Crcys-1A) mRNA, nuclear gene encoding organellar protein, complete cds Length = 1492 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 511 ||||||||||||| ||| |||||||||||||| | ||| ||||||||||| || |||| Sbjct: 251 tcgccgccaagctggagatcatggagccctgctgctccgttaaggacaggatcggctaca 310 Query: 512 gcatgatc 519 |||||||| Sbjct: 311 gcatgatc 318 Score = 40.1 bits (20), Expect = 7.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 370 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 429 ||||||| ||||||||||||||||| || || || || |||| ||||| ||||||||| Sbjct: 169 atcgccaccgatgtcaccgagctgattggcaagacccctatggtctacctgaacaaggtg 228
>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence Length = 1258 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct: 88 gtcgctgctaagctcgagattatggagccctgctgtagcgtcaaggacaggatagggtac 147 Query: 511 agcatgat 518 || ||||| Sbjct: 148 agtatgat 155
>gb|DQ336288.1| Vitis pseudoreticulata cysteine synthase mRNA, complete cds Length = 756 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 472 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcac 521 |||||||| ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 124 atggagccttgctctagtgtcaaggacaggatcgggtacagtatgatcac 173
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 472 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatc 519 ||||| ||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 138 atggaaccctgctccagcgtcaaagacaggattggttttagcatgatc 185
>gb|AY107771.1| Zea mays PCO121395 mRNA sequence Length = 1573 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 389 agctgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggc 448 |||||||||||| || ||| |||||||||| ||||||||||| || ||||||| | | Sbjct: 374 agctgatcgggaggaccccgatggtgtacctgaacaaggtgaccgaggggtgcggcgccc 433 Query: 449 gcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacag 500 | || || ||||||||||||| | || |||| | || ||||||||| ||||| Sbjct: 434 gggtggctgccaagctcgagttcctgcagccgtccttcagcgtcaaagacag 485
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 472 atggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 540 atggagccttgttctagtgttaaggacaggattgggtacagcatgat 586
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30468420 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30468465 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 30307008 cctcgccgcctcctcctcctcctcctccc 30306980
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 8595 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 8550
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 452 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 497 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30559842 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30559887 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 30398430 cctcgccgcctcctcctcctcctcctccc 30398402
>gb|AY325893.1| Porphyra purpurea cysteine synthase (CS) mRNA, complete cds Length = 1466 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctc 485 ||||||||||||||||||||||| ||||| Sbjct: 422 gccaagctcgagtccatggagccgtgctc 450
>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.2 mRNA, complete cds Length = 1553 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.3 mRNA, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.1 mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 301 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 360 Query: 511 agcatgat 518 || ||||| Sbjct: 361 agtatgat 368
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 269 cagcagcggccgccacttcgtcca 292 |||||||||||||||||||||||| Sbjct: 1430058 cagcagcggccgccacttcgtcca 1430081
>emb|X81973.1|ATCSMRNA A.thaliana mRNA for cysteine synthase Length = 1564 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 454 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 509
>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase Length = 1432 Score = 48.1 bits (24), Expect = 0.029 Identities = 42/48 (87%) Strand = Plus / Plus Query: 471 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 353 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 400
>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase (oasC gene) Length = 1377 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 295 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 350
>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 424 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 479
>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1556 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 494 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 549
>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1500 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 457 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 512 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 462 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 517
>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full insert sequence Length = 1555 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 353 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 412 Query: 511 agcatgat 518 || ||||| Sbjct: 413 agtatgat 420
>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full insert sequence Length = 1562 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 364 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 423 Query: 511 agcatgat 518 || ||||| Sbjct: 424 agtatgat 431
>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full insert sequence Length = 2104 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 895 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 954 Query: 511 agcatgat 518 || ||||| Sbjct: 955 agtatgat 962
>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full insert sequence Length = 1602 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 401 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 460 Query: 511 agcatgat 518 || ||||| Sbjct: 461 agtatgat 468
>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete cds Length = 1484 Score = 48.1 bits (24), Expect = 0.029 Identities = 42/48 (87%) Strand = Plus / Plus Query: 471 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 361 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 408
>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.029 Identities = 42/48 (87%) Strand = Plus / Plus Query: 471 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 342 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 389
>emb|AM087457.1| Nicotiana tabacum partial mRNA for putative chloroplast cysteine synthase 1 precursor (oas1 gene) Length = 1271 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 472 atggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||||| |||| ||| |||||||||||||| |||| ||| ||||| Sbjct: 241 atggagccatgctgcagtgtcaaggacaggatagggttcagtatgat 287
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 142 caccgtggacagcgcctccctgc 164 ||||||||||||||||||||||| Sbjct: 155436 caccgtggacagcgcctccctgc 155414
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 471 catggagccctgctccagcgtcaagga 497 |||||||||||||||||| |||||||| Sbjct: 12 catggagccctgctccagtgtcaagga 38
>gb|AF452451.1| Glycine max cysteine synthase mRNA, complete cds Length = 1267 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 472 atggagccctgctccagcgtcaaggacaggattgggtacagcatgat 518 |||||||| ||||| || || ||||||||||||||||| || ||||| Sbjct: 205 atggagccatgctctagtgtgaaggacaggattgggtatagtatgat 251
>ref|XM_464217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2366 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctccc 246 ||||||||||||| |||||||||||| Sbjct: 94 cgccgcctccgcccgctcctcctccc 119
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctccc 246 ||||||||||||| |||||||||||| Sbjct: 3466059 cgccgcctccgcccgctcctcctccc 3466084 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 8800625 cgccgcctccgcc-gctcctcctcccacc 8800598
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctccc 246 ||||||||||||| |||||||||||| Sbjct: 10854 cgccgcctccgcccgctcctcctccc 10879
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctccc 246 ||||||||||||| |||||||||||| Sbjct: 78882 cgccgcctccgcccgctcctcctccc 78907
>dbj|AK103682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136E21, full insert sequence Length = 2366 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctccc 246 ||||||||||||| |||||||||||| Sbjct: 93 cgccgcctccgcccgctcctcctccc 118
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcc 242 |||||||||||||||||||||| Sbjct: 113535 cgccgcctccgcctgctcctcc 113556
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcc 242 |||||||||||||||||||||| Sbjct: 90821 cgccgcctccgcctgctcctcc 90800
>gb|AF023910.1|AF023910 Physarum polycephalum DNA topoisomerase I (TOP1) mRNA, complete cds Length = 3325 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 236 ctcctcctcccaccacttccac 257 |||||||||||||||||||||| Sbjct: 1260 ctcctcctcccaccacttccac 1239
>dbj|AB031003.1| Cyanidioschyzon merolae cmOASTL1 gene for O-acetylserine (thiol) lyase 1, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 460 aagctcgagtccatggagccctgctc 485 ||||| |||||||||||||||||||| Sbjct: 295 aagctggagtccatggagccctgctc 320
>ref|NM_129937.2| Arabidopsis thaliana OASB (CYSTEINE SYNTHASE 1); cysteine synthase AT2G43750 (OASB) mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 573 gtcaaggataggattgggtacagtatgat 601
>ref|XM_469701.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1091 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 60 cctcgccgcctcctcctcctcctcctccc 88
>ref|XM_472311.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 agcctcgccgcctccgcctgc 236 ||||||||||||||||||||| Sbjct: 40 agcctcgccgcctccgcctgc 60
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||| |||||||||||||||||||| Sbjct: 6025 cgcctcctccgcctgctcctcctcc 6049
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||| |||||||||||||||||||| Sbjct: 89673 cgcctcctccgcctgctcctcctcc 89649
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||| |||||||||||||| Sbjct: 27536 cgccgcctcctcctgctcctcctcc 27512
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gctgatcgggaacacgccgct 410 ||||||||||||||||||||| Sbjct: 1836671 gctgatcgggaacacgccgct 1836651
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 ||||||| ||||||||||||||||| Sbjct: 71691 cgccgccgccgcctgctcctcctcc 71715
>ref|XM_801941.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507807.20) partial mRNA Length = 558 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctccc 246 ||||||||||||||||||||| Sbjct: 28 cctccgcctgctcctcctccc 8
>ref|XM_814884.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507063.180) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctccc 246 ||||||||||||||||||||| Sbjct: 166 cctccgcctgctcctcctccc 146
>emb|AL844851.4| Human DNA sequence from clone DAQB-335A13 on chromosome 6 Contains the HCP5P15 pseudogene for HLA complex P5 pseudogene 15, the HLA-F gene for major histocompatibility complex, class I, F, the RPL23AP1 pseudogene for ribosomal protein L23a 1, the DAQB-335A13.8 locus for novel transcripts sharing homology with MICE, the MICE pseudogene for MHC class I polypeptide-related sequence E, the HCG9P5 pseudogene for HLA complex group 9 pseudogene 5, the IFITM4P pseudogene for interferon induced transmembrane protein 4, the HCP5P14 pseudogene for HLA complex P5 pseudogene 14, the HCG4 gene for HLA complex group 4, the HCP5P13 pseudogene for HLA complex P5 pseudogene 13, the DAQB-335A13.14 locus for novel transcripts that share homology with HLA-75, the pseudogene HLA-75, the HLA-90 pseudogene, the RPL7AP7 pseudogene for ribosomal protein L7a pseudogene 7, the MICG pseudogene for MHC class I polypeptide-related sequence G, and 4 CpG islands, complete sequence Length = 119030 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 90912 tcgtcgggtggcgggatgggggagg 90936
>emb|AL671561.7| Human DNA sequence from clone XXbac-209H21 on chromosome 6 contains a HLA (MHC) class 1 pseudogene, a putative novel MHC class 1 (HLA) protein (fragment), a 60S ribosomal protein L7A (RPL7A) pseudogene, a P5-1 pseudogene, the HLA-G gene for histompatibility antigen, class I, G, a major histocompatibility complex, class I, H pseudogene (HLA-H, HLAHP) and five CpG islands, complete sequence Length = 105633 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 526 tcgtcgggtggcgggatgggggagg 550
>emb|AL669813.6| Human DNA sequence from clone XXbac-231I11 on chromosome 6 contains the 3' end of the gene for myelin oligodendrocyte glycoprotein (MOG), a novel KRAB box-containing C2H2 type zinc finger protein (fragment), a P5-1 pseudogene, the HLA-F gene for major histocompatibility complex, class I, F (HLAF, HLA-5.4, HLA-CDA12), a 60S ribosomal protein L23A (RPL23A) pseudogene, a MHC class 1 polypeptide-related sequence B (MICB) pseudogene, a HCGIX pseudogene, a interferon-induced transmembrane protein 3 (IFITM3, 1-8U) pseudogene and four CpG islands, complete sequence Length = 115133 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 113659 tcgtcgggtggcgggatgggggagg 113683
>emb|BX050838.1|CNS09BE2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 908 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 ||||||||||||| ||||||||||| Sbjct: 419 cgccgcctccgccggctcctcctcc 395
>emb|Y10845.1|BJY10845 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL4 Length = 1280 Score = 42.1 bits (21), Expect = 1.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 451 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 510 ||||| || ||||||||| ||||| || |||||||| ||||| ||||||||||| | Sbjct: 167 gtcgctgctaagctcgagatgatggaaccttgctccagtgtcaaagacaggattggtttt 226 Query: 511 agcatgatc 519 ||||||||| Sbjct: 227 agcatgatc 235
>gb|AY096681.1| Arabidopsis thaliana putative cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1210 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 343 gtcaaggataggattgggtacagtatgat 371
>emb|X81698.1|ATCPACS1 A.thaliana cpACS1 mRNA for cysteine synthase Length = 1420 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 398 gtcaaggataggattgggtacagtatgat 426
>emb|X80377.2|ATOACLY2 Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.7-4) Length = 1378 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 355 gtcaaggataggattgggtacagtatgat 383
>gb|AY065375.1| Arabidopsis thaliana cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 467 gtcaaggataggattgggtacagtatgat 495
>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the 5' end of a novel gene, a ribosomal protein L7A (Rpl7a) pseudogene and a CpG island, complete sequence Length = 127405 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||||||| |||||||||| Sbjct: 46684 cgccgcctccgcctcctcctcctcc 46708
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 agcctcgccgcctccgcctgc 236 ||||||||||||||||||||| Sbjct: 35837 agcctcgccgcctccgcctgc 35857
>emb|CR925767.6| Human DNA sequence from clone DAAP-84C21 on chromosome 6, complete sequence Length = 112545 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 27683 tcgtcgggtggcgggatgggggagg 27707
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 98688 cctcgccgcctcctcctcctcctcctccc 98660
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 agcctcgccgcctccgcctgc 236 ||||||||||||||||||||| Sbjct: 19384583 agcctcgccgcctccgcctgc 19384603
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||| |||||||||||||| Sbjct: 19308985 cgccgcctcctcctgctcctcctcc 19308961 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||| |||||||||||||||||||| Sbjct: 7176530 cgcctcctccgcctgctcctcctcc 7176506
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||||||| |||||||||| Sbjct: 752115 cgccgcctccgcctcctcctcctcc 752091
>gb|AF324490.1|AF324490 Anas platyrhynchos membrane-bound immunoglobulin alpha heavy chain mRNA, partial cds, alternatively spliced Length = 440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctccg 304 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>emb|BX819476.1|CNS0A9QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 383 gtcaaggataggattgggtacagtatgat 411
>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence Length = 156100 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 ||||||| ||||||||||||||||| Sbjct: 149964 cgccgccgccgcctgctcctcctcc 149988
>gb|AY086156.1| Arabidopsis thaliana clone 21866 mRNA, complete sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgat 518 |||||||| |||||||||||||| ||||| Sbjct: 498 gtcaaggataggattgggtacagtatgat 526
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 2154521 tcgtcgggtggcgggatgggggagg 2154497
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||||||| |||||||||| Sbjct: 90646 cgccgcctccgcctcctcctcctcc 90622
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 5643 cgccgcctccgcc-gctcctcctcccacc 5616
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cgctcgtcgggcggcgggatg 348 ||||||||||||||||||||| Sbjct: 2834767 cgctcgtcgggcggcgggatg 2834787
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 99704 cgccgcctccgcc-gctcctcctcccacc 99677
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||||||| |||||||||| Sbjct: 71922 cgccgcctccgcctcctcctcctcc 71898
>emb|AJ544895.1|TNI544895 Tetraodon nigroviridis crfb9 gene for helical cytokine receptor CRFB9, exons 1-5 Length = 4657 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||||||| |||||||||| Sbjct: 359 cgccgcctccgcctcctcctcctcc 335
>emb|AJ314756.1|APL314756 Anas platyrhynchos partial mRNA for immunoglobulin alpha heavy chain (mIgA gene) Length = 440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctccg 304 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>dbj|AK104581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B12, full insert sequence Length = 977 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 196 cgccgcctccgcc-gctcctcctcccacc 169
>dbj|AK099080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170L15, full insert sequence Length = 1565 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||| |||||||||||||| Sbjct: 162 cgccgcctcctcctgctcctcctcc 186
>dbj|AK072451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I03, full insert sequence Length = 2829 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 57 cctcgccgcctcctcctcctcctcctccc 85
>dbj|AK071982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B22, full insert sequence Length = 1597 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||| |||||||||||||| Sbjct: 193 cgccgcctcctcctgctcctcctcc 217
>dbj|AK064805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D15, full insert sequence Length = 985 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 206 cgccgcctccgcc-gctcctcctcccacc 179
>dbj|AK059983.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F12, full insert sequence Length = 1084 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 cctcgccgcctccgcctgctcctcctccc 246 ||||||||||||| ||| ||||||||||| Sbjct: 56 cctcgccgcctcctcctcctcctcctccc 84
>dbj|AK059303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F10, full insert sequence Length = 1054 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcccacc 249 ||||||||||||| ||||||||||||||| Sbjct: 197 cgccgcctccgcc-gctcctcctcccacc 170
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||||||||| |||||||||||||| Sbjct: 19468534 cgccgcctcctcctgctcctcctcc 19468510 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctcc 245 |||| |||||||||||||||||||| Sbjct: 7242424 cgcctcctccgcctgctcctcctcc 7242400
>dbj|AB023058.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:950A3, complete sequence Length = 114450 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 tcgtcgggcggcgggatgggggagg 355 |||||||| |||||||||||||||| Sbjct: 39154 tcgtcgggtggcgggatgggggagg 39130
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 gtcaaggacaggattgggtacagcatgatcac 521 ||||| |||||||||||||| || |||||||| Sbjct: 43 gtcaaagacaggattgggtatagtatgatcac 74
>ref|NM_203146.1| Arabidopsis thaliana SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding AT5G43270 (SPL2) transcript variant AT5G43270.3 mRNA, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1211 gcagccggacccacccgcag 1230
>ref|NM_123693.3| Arabidopsis thaliana SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor AT5G43270 (SPL2) transcript variant AT5G43270.2 mRNA, complete cds Length = 1556 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1259 gcagccggacccacccgcag 1278
>ref|NM_180791.1| Arabidopsis thaliana SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor AT5G43270 (SPL2) transcript variant AT5G43270.1 mRNA, complete cds Length = 1662 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1334 gcagccggacccacccgcag 1353
>ref|NM_184430.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3038 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cggccgccacttcgtccacctcca 298 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence Length = 202255 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 gccgcctccgcctgctcctcctcc 245 ||||||||||||| |||||||||| Sbjct: 92258 gccgcctccgcctcctcctcctcc 92281
>gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, complete sequence Length = 232751 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctc 244 |||||||||| ||||||||||||| Sbjct: 164400 cgccgcctcctcctgctcctcctc 164377
>ref|NM_013665.1| Mus musculus short stature homeobox 2 (Shox2), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 472 cctccgcctgctcctcctcc 453
>gb|AY301275.1| Anopheles gambiae G-protein coupled receptor mRNA, complete cds Length = 2989 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccgcctccgcctgctcctcctccc 246 |||||||||||| ||||||||||| Sbjct: 1976 ccgcctccgcctcctcctcctccc 1953
>ref|XM_322803.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgggggaggcttcgacgccg 366 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XM_951732.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgggggaggcttcgacgccg 366 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XM_873359.1| PREDICTED: Bos taurus similar to Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X), transcript variant 5 (LOC525900), mRNA Length = 945 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 239 cctccgcctgctcctcctcc 220
>ref|XM_873262.1| PREDICTED: Bos taurus similar to Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X), transcript variant 4 (LOC525900), mRNA Length = 981 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 239 cctccgcctgctcctcctcc 220
>ref|XM_864455.1| PREDICTED: Bos taurus similar to Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X), transcript variant 3 (LOC525900), mRNA Length = 1062 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 239 cctccgcctgctcctcctcc 220
>gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete sequence Length = 163052 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cgcctgtataaagcctcgcc 224 |||||||||||||||||||| Sbjct: 122276 cgcctgtataaagcctcgcc 122295
>gb|AC131581.8| Mus musculus chromosome 16, clone RP23-89A11, complete sequence Length = 169623 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gtctcctgctgcttcactcaaggc 35 |||||||| ||||||||||||||| Sbjct: 81454 gtctcctgttgcttcactcaaggc 81431
>ref|XR_003996.1| PREDICTED: Mus musculus similar to ring finger and KH domain containing 2 (LOC672777), mRNA Length = 903 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctcc 303 |||||||||||||||||||| Sbjct: 208 cttcgtccacctccagctcc 189
>gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosome 16, complete sequence Length = 227299 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gtctcctgctgcttcactcaaggc 35 |||||||| ||||||||||||||| Sbjct: 171562 gtctcctgttgcttcactcaaggc 171539
>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence Length = 166261 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccctgccgggccgccctcct 178 |||||||||||||||||||| Sbjct: 126679 ccctgccgggccgccctcct 126698
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctcc 303 |||||||||||||||||||| Sbjct: 99651 cttcgtccacctccagctcc 99632
>emb|Z83241.1|CET25C8 Caenorhabditis elegans Cosmid T25C8, complete sequence Length = 15601 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 219 ctcgccgcctccgcctgctcctcctccc 246 ||||||||| |||||| ||||||||||| Sbjct: 2015 ctcgccgccgccgcctcctcctcctccc 1988
>ref|XM_801375.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508015.50) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 cctcgccgcctccgcctgctcctcctcc 245 ||||||||||||| ||| |||||||||| Sbjct: 591 cctcgccgcctcctcctcctcctcctcc 564
>emb|CR685933.2|CNS0FS7T Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gccgcctccgcctgctcctcctcc 245 ||||||||||||| |||||||||| Sbjct: 225 gccgcctccgcctcctcctcctcc 202
>gb|BC008829.2| Homo sapiens short stature homeobox 2, mRNA (cDNA clone MGC:12649 IMAGE:4122010), complete cds Length = 2039 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 396 cctccgcctgctcctcctcc 377
>ref|XM_502161.1| Yarrowia lipolytica CLIB122, YALI0C22990g predicted mRNA Length = 2532 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 agtccatggagccctgctcc 486 |||||||||||||||||||| Sbjct: 2407 agtccatggagccctgctcc 2388
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cagcgtcaaggacaggattg 505 |||||||||||||||||||| Sbjct: 4427403 cagcgtcaaggacaggattg 4427422
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgggggaggcttcgacgccg 366 |||||||||||||||||||| Sbjct: 84472 tgggggaggcttcgacgccg 84453
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccgcctccgcctgctcctcctccc 246 |||||||||||| ||||||||||| Sbjct: 56031 ccgcctccgcctcctcctcctccc 56008
>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7 Length = 1493 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 378 ggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaa 425 ||||||||| ||||| ||||||||||| || |||| || |||||||| Sbjct: 114 ggatgtcacagagcttatcgggaacacccctatggtatatctcaacaa 161
>emb|AJ720503.1| Gallus gallus mRNA for hypothetical protein, clone 19d4 Length = 1630 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctc 244 ||||||||||||||||| |||||| Sbjct: 213 cgccgcctccgcctgctgctcctc 236
>ref|NM_001006257.1| Gallus gallus junctional adhesion molecule 2 (JAM2), mRNA Length = 1630 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 cgccgcctccgcctgctcctcctc 244 ||||||||||||||||| |||||| Sbjct: 213 cgccgcctccgcctgctgctcctc 236
>gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104564 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 29730 cctccgcctgctcctcctcc 29749
>dbj|D38173.1|AR4ORF469P Actinophage R4 gene for ORF469 protein, complete cds Length = 2522 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 1844 cctccgcctgctcctcctcc 1825
>gb|DQ351887.1| Eukrohnia hamata type I 18S small subunit ribosomal RNA gene, partial sequence Length = 1889 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 tccgtcgggcccgcctgcagccggaccc 123 ||||||||||||||| | |||||||||| Sbjct: 1475 tccgtcgggcccgccagaagccggaccc 1448
>gb|DQ351886.1| Eukrohnia bathypelagica type I 18S small subunit ribosomal RNA gene, partial sequence Length = 1890 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 tccgtcgggcccgcctgcagccggaccc 123 ||||||||||||||| | |||||||||| Sbjct: 1449 tccgtcgggcccgccagaagccggaccc 1422
>ref|NM_006884.2| Homo sapiens short stature homeobox 2 (SHOX2), transcript variant SHOX2a, mRNA Length = 3135 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 380 cctccgcctgctcctcctcc 361
>ref|NM_001039214.1| Mus musculus ring finger and KH domain containing 2 (Rkhd2), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctcc 303 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AK133686.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437G16 product:hypothetical Proline-rich region profile/Alanine-rich region profile/Glutamic acid-rich region profile containing protein, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cttcgtccacctccagctcc 303 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>gb|AC132390.4| Mus musculus BAC clone RP23-453P1 from chromosome 8, complete sequence Length = 200323 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cgccgcctccgcctgctcctcctc 244 |||||||||| ||||||||||||| Sbjct: 89170 cgccgcctcctcctgctcctcctc 89147
>ref|NM_067408.3| Caenorhabditis elegans T25C8.2 (Actins) mRNA, complete cds Length = 1345 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 ctcgccgcctccgcctgctcctcctccc 246 ||||||||| |||||| ||||||||||| Sbjct: 681 ctcgccgccgccgcctcctcctcctccc 708
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cggccgccacttcgtccacctcca 298 ||||||||||||||||| |||||| Sbjct: 2982574 cggccgccacttcgtccgcctcca 2982597
>emb|BX832762.1|CNS0A100 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1395 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1259 gcagccggacccacccgcag 1278
>emb|BX831680.1|CNS0A0XP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1507 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1251 gcagccggacccacccgcag 1270
>gb|AC137630.9| Homo sapiens 3 BAC RP13-131K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120173 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gccgcctccgcctgctcctcctcc 245 ||||||||||||| |||||||||| Sbjct: 56434 gccgcctccgcctcctcctcctcc 56411
>gb|BT004327.1| Arabidopsis thaliana clone RAFL15-31-G21 (R50184) At5g43270 mRNA, complete sequence Length = 1654 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1334 gcagccggacccacccgcag 1353
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tccacctccagctccgggag 308 |||||||||||||||||||| Sbjct: 4971598 tccacctccagctccgggag 4971617
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgacgccggcgatcgccagg 378 |||||||||||||||||||| Sbjct: 1596207 cgacgccggcgatcgccagg 1596226
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cggcgatcgccagggatgtcaccg 388 ||||||||||||| |||||||||| Sbjct: 2981330 cggcgatcgccagcgatgtcaccg 2981353
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cggccgccacttcgtccacctcca 298 ||||||||||||||||| |||||| Sbjct: 64091 cggccgccacttcgtccgcctcca 64114
>emb|AL805898.11| Mouse DNA sequence from clone RP23-432F24 on chromosome 4, complete sequence Length = 215828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ggtccaccgtggacagcgcc 157 |||||||||||||||||||| Sbjct: 152372 ggtccaccgtggacagcgcc 152353
>dbj|AB017070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNL12 Length = 45911 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 21642 gcagccggacccacccgcag 21623
>emb|AJ011626.1|ATH011626 Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter binding protein-like 2 Length = 1468 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1211 gcagccggacccacccgcag 1230
>emb|AJ011625.1|ATH011625 Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa promoter binding protein-like 2 Length = 1669 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 1313 gcagccggacccacccgcag 1332
>emb|AJ011624.1|ATH011624 Arabidopsis thaliana (ecotype Columbia) spl2 gene, exons 1-5 Length = 3501 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagccggacccacccgcag 131 |||||||||||||||||||| Sbjct: 2859 gcagccggacccacccgcag 2878
>ref|XM_321555.1| Anopheles gambiae str. PEST ENSANGP00000018165 (ENSANGG00000015676), partial mRNA Length = 1839 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccgcctccgcctgctcctcctccc 246 |||||||||||| ||||||||||| Sbjct: 1694 ccgcctccgcctcctcctcctccc 1671
>dbj|AK099840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C16, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cggccgccacttcgtccacctcca 298 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>gb|DQ278180.1| Xenopus tropicalis small GTPase Ras-dva-2 mRNA, complete cds Length = 630 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tccaccgtggacagcgcctc 159 |||||||||||||||||||| Sbjct: 431 tccaccgtggacagcgcctc 412
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gccgcctccgcctgctcctcctcc 245 ||||||||||||| |||||||||| Sbjct: 186419 gccgcctccgcctcctcctcctcc 186396
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aggccgccacgccatccaca 51 |||||||||||||||||||| Sbjct: 786522 aggccgccacgccatccaca 786503
>dbj|AP001189.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-672A2, complete sequence Length = 186389 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 caatctcctccaccaacctcgcctgtat 213 ||||||||| ||||| |||||||||||| Sbjct: 99601 caatctccttcaccaccctcgcctgtat 99574
>gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protein (OG-12) mRNA, complete cds Length = 1603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 472 cctccgcctgctcctcctcc 453
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 86184 cctccgcctgctcctcctcc 86165
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence Length = 226568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctgctcctcctcccaccact 252 |||||||||||||||||||| Sbjct: 70248 ctgctcctcctcccaccact 70267
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 agtccatggagccctgctcc 486 |||||||||||||||||||| Sbjct: 3085728 agtccatggagccctgctcc 3085747
>emb|AL672068.13| Mouse DNA sequence from clone RP23-69M9 on chromosome X, complete sequence Length = 217917 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctccgcctgctcctcctcc 245 |||||||||||||||||||| Sbjct: 63057 cctccgcctgctcctcctcc 63038
>dbj|D14362.1|OTO18SF P.gotoi gene for 18S rRNA, partial sequence Length = 1836 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 tccgtcgggcccgcctgcagccggaccc 123 ||||||||||||||| | |||||||||| Sbjct: 1440 tccgtcgggcccgccagaagccggaccc 1413
>dbj|AP005133.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-54L20, complete sequences Length = 86000 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cctgctcctcctcccaccac 251 |||||||||||||||||||| Sbjct: 38396 cctgctcctcctcccaccac 38415
>dbj|AP005122.2| Homo sapiens genomic DNA, chromosome 11, clone:RP11-419F8, complete sequence Length = 170006 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cctgctcctcctcccaccac 251 |||||||||||||||||||| Sbjct: 167670 cctgctcctcctcccaccac 167689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,707,914 Number of Sequences: 3902068 Number of extensions: 3707914 Number of successful extensions: 104028 Number of sequences better than 10.0: 171 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 101779 Number of HSP's gapped (non-prelim): 2285 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
