Clone Name | bart36e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LE14B_LITER (Q40153) LEC14B protein | 55 | 1e-07 | 2 | LE14B_PRUAR (O24467) LEC14B homolog | 42 | 0.001 | 3 | HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1) | 30 | 5.0 | 4 | CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2 | 30 | 6.5 | 5 | SWP82_YEAST (P43554) SWI/SNF global transcription activator comp... | 29 | 8.5 |
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>LE14B_LITER (Q40153) LEC14B protein| Length = 473 Score = 55.1 bits (131), Expect = 1e-07 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 7/100 (7%) Frame = +1 Query: 301 MGYGMSRLHEGYSEHEGQNSDGSSSVE--VNNDFSKLNNDIFHMTRLGSGPSESIRKSM- 471 MGY MSR S +SD +S + +N L+++I +TRL S P E++ + + Sbjct: 1 MGYAMSRFETDVSVIFSSSSDSETSHDSLINKPVKNLDHEIAQLTRLRSAPHENLSRDLL 60 Query: 472 -DRV---SVTRLLRGREVNSSGNGKFSPVDRAFVLGH*LP 579 RV S ++L GRE N SG G+FS D V+ LP Sbjct: 61 VKRVLPLSTMKMLAGREANVSGRGRFSSADCCHVVSRHLP 100
>LE14B_PRUAR (O24467) LEC14B homolog| Length = 475 Score = 42.4 bits (98), Expect = 0.001 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Frame = +1 Query: 328 EGYSEHEGQNSDGSSSVEVNNDFSKLNNDIFHMTRLGSGPSESIRKSMDR-----VSVTR 492 EG +G N EV+NDF +++I +T+ S P + + + M VS + Sbjct: 21 EGSGSSKGPN-------EVSNDF---DHEIAQLTKHRSRPHQLLSQDMPGKSRLLVSTMK 70 Query: 493 LLRGREVNSSGNGKFSPVDRAFVLGH*LP 579 +L GRE N SG G+FS D VL LP Sbjct: 71 MLVGRESNHSGRGRFSSADGCHVLSRYLP 99
>HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1)| Length = 1046 Score = 30.0 bits (66), Expect = 5.0 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 238 WSLHFDEHLEGELIYI*QLKTMGYGMSRLHEGYSEHEGQNSDGSSSVEVNN 390 +S+H + +G + + +MG G S+ H + H QNS S + NN Sbjct: 942 YSIHNETTSQGRKVSV---GSMGSGKSKHHHNHHRHSRQNSSKGSDYDYNN 989
>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2| Length = 1484 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 57 EHGGEKQPPTLKRPVSDDGRIAASSIPP 140 E+GG+ PPT + P S D + ++S+ PP Sbjct: 591 ENGGKSLPPTRRAPSSGDDQSSSSTQPP 618
>SWP82_YEAST (P43554) SWI/SNF global transcription activator complex component| SWP82 Length = 623 Score = 29.3 bits (64), Expect = 8.5 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Frame = +1 Query: 289 QLKTMGYGMSRLHEGYSEHEGQNSDGSSSVEVNNDFSKLNNDIFHMTRLGSG------PS 450 Q+K M + R E +++E Q DGS+S+ + N +N + R+ S S Sbjct: 334 QMKAMDIPIGRHEELLAQYESQAPDGSASISLPNHIPSVNPSNKPIKRMLSSILDINVSS 393 Query: 451 ESIRKSMDRVSVTRLLRGREVNSS 522 +KS + + + +G+ N++ Sbjct: 394 SKNKKSEENEMIKPMNKGQHKNNT 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,956,227 Number of Sequences: 219361 Number of extensions: 1564703 Number of successful extensions: 4560 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4350 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4555 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)