ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart36e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
2gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AK072186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
5ref|XM_475213.1| Oryza sativa (japonica cultivar-group), predic... 105 2e-19
6emb|AL049554.2|HSJ514B11 Human DNA sequence from clone RP3-514B1... 44 0.50
7gb|AC148407.2| Xenopus tropicalisBAC clone ISB1-124I14 containin... 44 0.50
8gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 44 0.50
9gb|AC163689.3| Mus musculus BAC clone CH36-200G6 from chromosome... 42 2.0
10emb|AL596164.1| Listeria innocua Clip11262 complete genome, segm... 42 2.0
11gb|AC154550.2| Mus musculus BAC clone RP23-444H18 from chromosom... 42 2.0
12emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chr... 42 2.0
13emb|AL591975.1| Listeria monocytogenes strain EGD, complete geno... 42 2.0
14gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome... 42 2.0
15gb|AC102834.8| Mus musculus chromosome 5, clone RP24-299N23, com... 40 7.9
16gb|U41026.1| Caenorhabditis elegans cosmid C28G1, complete sequence 40 7.9
17gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.9
18gb|AC134441.4| Mus musculus BAC clone RP24-544J6 from chromosome... 40 7.9
19gb|AC127290.3| Mus musculus BAC clone RP23-364F13 from chromosom... 40 7.9
20gb|AC124731.5| Mus musculus BAC clone RP23-287B7 from 3, complet... 40 7.9
21emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chro... 40 7.9
22emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G1... 40 7.9
23emb|AJ235272.1|RPXX03 Rickettsia prowazekii strain Madrid E, com... 40 7.9
24emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in... 40 7.9
25gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.9
26gb|AC084214.19|AC084214 Mus musculus X BAC RP23-382J5 (Roswell P... 40 7.9
27dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 7.9
28gb|AF262700.1|AF262700 Phascolarctos cinereus olfactory receptor... 40 7.9
29gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Canc... 40 7.9
30gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, comple... 40 7.9
31dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.9
32gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Ca... 40 7.9
33emb|CR848036.8| Zebrafish DNA sequence from clone DKEY-76C17 in ... 40 7.9
34emb|AL731727.18| Mouse DNA sequence from clone RP23-147K15 on ch... 40 7.9 
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
             complete sequence
          Length = 150825

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/189 (83%), Gaps = 4/189 (2%)
 Strand = Plus / Minus

                                                                         
Query: 268   ggagaattgatatacatatagcagt-tgaaaacgatgggttatggcatgagtaggctgca 326
             |||||||||||||||||||   | | ||| || |||||||||||||||||||||| || |
Sbjct: 29291 ggagaattgatatacatatgaaactctgagaaggatgggttatggcatgagtaggatgga 29232

                                                                         
Query: 327   tgagggatacagtgaacatgaagggcagaatagtgatggatctagttcagtcgaagtgaa 386
              |||| |||||| || |||||||  ||||||| || |||||||| ||||    |||||||
Sbjct: 29231 ggaggaatacagcgagcatgaagatcagaataatggtggatctaattcac---aagtgaa 29175

                                                                         
Query: 387   taatgacttctcaaaattaaataatgatattttccacatgactcgactaggatcaggacc 446
             |||||| |||| |||   | |||||||||||||||| ||||||| | || ||||||||||
Sbjct: 29174 taatgagttcttaaacacacataatgatattttccatatgactcaaataagatcaggacc 29115

                      
Query: 447   tagtgaaag 455
             |||||||||
Sbjct: 29114 tagtgaaag 29106



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 501   tggaagggaagttaactcttcaggaaatggaaagttttctccggttgatcgtgcattcgt 560
             |||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||| ||  |
Sbjct: 29048 tggaagggaaattaattcttcaggaaatgggaagttctcttcagttgatcgtgcgtttct 28989

                                 
Query: 561   tcttggtcattaacttccag 580
             |||||||| ||| |||||||
Sbjct: 28988 tcttggtcgttatcttccag 28969
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>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11,
             complete sequence
          Length = 98103

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/189 (83%), Gaps = 4/189 (2%)
 Strand = Plus / Minus

                                                                         
Query: 268   ggagaattgatatacatatagcagt-tgaaaacgatgggttatggcatgagtaggctgca 326
             |||||||||||||||||||   | | ||| || |||||||||||||||||||||| || |
Sbjct: 66218 ggagaattgatatacatatgaaactctgagaaggatgggttatggcatgagtaggatgga 66159

                                                                         
Query: 327   tgagggatacagtgaacatgaagggcagaatagtgatggatctagttcagtcgaagtgaa 386
              |||| |||||| || |||||||  ||||||| || |||||||| ||||    |||||||
Sbjct: 66158 ggaggaatacagcgagcatgaagatcagaataatggtggatctaattcac---aagtgaa 66102

                                                                         
Query: 387   taatgacttctcaaaattaaataatgatattttccacatgactcgactaggatcaggacc 446
             |||||| |||| |||   | |||||||||||||||| ||||||| | || ||||||||||
Sbjct: 66101 taatgagttcttaaacacacataatgatattttccatatgactcaaataagatcaggacc 66042

                      
Query: 447   tagtgaaag 455
             |||||||||
Sbjct: 66041 tagtgaaag 66033



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 501   tggaagggaagttaactcttcaggaaatggaaagttttctccggttgatcgtgcattcgt 560
             |||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||| ||  |
Sbjct: 65975 tggaagggaaattaattcttcaggaaatgggaagttctcttcagttgatcgtgcgtttct 65916

                                 
Query: 561   tcttggtcattaacttccag 580
             |||||||| ||| |||||||
Sbjct: 65915 tcttggtcgttatcttccag 65896
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/189 (83%), Gaps = 4/189 (2%)
 Strand = Plus / Minus

                                                                            
Query: 268      ggagaattgatatacatatagcagt-tgaaaacgatgggttatggcatgagtaggctgca 326
                |||||||||||||||||||   | | ||| || |||||||||||||||||||||| || |
Sbjct: 19701217 ggagaattgatatacatatgaaactctgagaaggatgggttatggcatgagtaggatgga 19701158

                                                                            
Query: 327      tgagggatacagtgaacatgaagggcagaatagtgatggatctagttcagtcgaagtgaa 386
                 |||| |||||| || |||||||  ||||||| || |||||||| ||||    |||||||
Sbjct: 19701157 ggaggaatacagcgagcatgaagatcagaataatggtggatctaattcac---aagtgaa 19701101

                                                                            
Query: 387      taatgacttctcaaaattaaataatgatattttccacatgactcgactaggatcaggacc 446
                |||||| |||| |||   | |||||||||||||||| ||||||| | || ||||||||||
Sbjct: 19701100 taatgagttcttaaacacacataatgatattttccatatgactcaaataagatcaggacc 19701041

                         
Query: 447      tagtgaaag 455
                |||||||||
Sbjct: 19701040 tagtgaaag 19701032



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 501      tggaagggaagttaactcttcaggaaatggaaagttttctccggttgatcgtgcattcgt 560
                |||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||| ||  |
Sbjct: 19700974 tggaagggaaattaattcttcaggaaatgggaagttctcttcagttgatcgtgcgtttct 19700915

                                    
Query: 561      tcttggtcattaacttccag 580
                |||||||| ||| |||||||
Sbjct: 19700914 tcttggtcgttatcttccag 19700895
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>dbj|AK072186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144D17, full
           insert sequence
          Length = 1869

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/189 (83%), Gaps = 4/189 (2%)
 Strand = Plus / Plus

                                                                       
Query: 268 ggagaattgatatacatatagcagt-tgaaaacgatgggttatggcatgagtaggctgca 326
           |||||||||||||||||||   | | ||| || |||||||||||||||||||||| || |
Sbjct: 157 ggagaattgatatacatatgaaactctgagaaggatgggttatggcatgagtaggatgga 216

                                                                       
Query: 327 tgagggatacagtgaacatgaagggcagaatagtgatggatctagttcagtcgaagtgaa 386
            |||| |||||| || |||||||  ||||||| || |||||||| ||||    |||||||
Sbjct: 217 ggaggaatacagcgagcatgaagatcagaataatggtggatctaattcac---aagtgaa 273

                                                                       
Query: 387 taatgacttctcaaaattaaataatgatattttccacatgactcgactaggatcaggacc 446
           |||||| |||| |||   | |||||||||||||||| ||||||| | || ||||||||||
Sbjct: 274 taatgagttcttaaacacacataatgatattttccatatgactcaaataagatcaggacc 333

                    
Query: 447 tagtgaaag 455
           |||||||||
Sbjct: 334 tagtgaaag 342



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 501 tggaagggaagttaactcttcaggaaatggaaagttttctccggttgatcgtgcattcgt 560
           |||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||| ||  |
Sbjct: 400 tggaagggaaattaattcttcaggaaatgggaagttctcttcagttgatcgtgcgtttct 459

                               
Query: 561 tcttggtcattaacttccag 580
           |||||||| ||| |||||||
Sbjct: 460 tcttggtcgttatcttccag 479
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>ref|XM_475213.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score =  105 bits (53), Expect = 2e-19
 Identities = 130/155 (83%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 301 atgggttatggcatgagtaggctgcatgagggatacagtgaacatgaagggcagaatagt 360
           ||||||||||||||||||||| || | |||| |||||| || |||||||  ||||||| |
Sbjct: 1   atgggttatggcatgagtaggatggaggaggaatacagcgagcatgaagatcagaataat 60

                                                                       
Query: 361 gatggatctagttcagtcgaagtgaataatgacttctcaaaattaaataatgatattttc 420
           | |||||||| ||||    ||||||||||||| |||| |||   | ||||||||||||||
Sbjct: 61  ggtggatctaattcac---aagtgaataatgagttcttaaacacacataatgatattttc 117

                                              
Query: 421 cacatgactcgactaggatcaggacctagtgaaag 455
           || ||||||| | || |||||||||||||||||||
Sbjct: 118 catatgactcaaataagatcaggacctagtgaaag 152



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 501 tggaagggaagttaactcttcaggaaatggaaagttttctccggttgatcgtgcattcgt 560
           |||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||| ||  |
Sbjct: 210 tggaagggaaattaattcttcaggaaatgggaagttctcttcagttgatcgtgcgtttct 269

                               
Query: 561 tcttggtcattaacttccag 580
           |||||||| ||| |||||||
Sbjct: 270 tcttggtcgttatcttccag 289
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>emb|AL049554.2|HSJ514B11 Human DNA sequence from clone RP3-514B11 on chromosome 6q16.1-21,
             complete sequence
          Length = 100494

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 393   cttctcaaaattaaataatgat 414
             ||||||||||||||||||||||
Sbjct: 91310 cttctcaaaattaaataatgat 91331
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>gb|AC148407.2| Xenopus tropicalisBAC clone ISB1-124I14 containing the sox11 gene,
             complete cds, complete sequence
          Length = 85265

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 339   tgaacatgaagggcagaatagt 360
             ||||||||||||||||||||||
Sbjct: 52871 tgaacatgaagggcagaatagt 52892
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>gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-145o9, complete
            sequence
          Length = 107765

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 393  cttctcaaaattaaataatgat 414
            ||||||||||||||||||||||
Sbjct: 7355 cttctcaaaattaaataatgat 7376
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>gb|AC163689.3| Mus musculus BAC clone CH36-200G6 from chromosome 13, complete sequence
          Length = 188084

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 502   ggaagggaagttaactcttca 522
             |||||||||||||||||||||
Sbjct: 37988 ggaagggaagttaactcttca 37968
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>emb|AL596164.1| Listeria innocua Clip11262 complete genome, segment 2/12
          Length = 224650

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    atttggaaggagaattgatat 280
              |||||||||||||||||||||
Sbjct: 200139 atttggaaggagaattgatat 200159
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>gb|AC154550.2| Mus musculus BAC clone RP23-444H18 from chromosome 13, complete
             sequence
          Length = 190647

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   ggaagggaagttaactcttca 522
             |||||||||||||||||||||
Sbjct: 74367 ggaagggaagttaactcttca 74387
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>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete
              sequence
          Length = 241451

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 507    ggaagttaactcttcaggaaa 527
              |||||||||||||||||||||
Sbjct: 222511 ggaagttaactcttcaggaaa 222531
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>emb|AL591975.1| Listeria monocytogenes strain EGD, complete genome, segment 3/12
          Length = 280050

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atttggaaggagaattgatat 280
             |||||||||||||||||||||
Sbjct: 59980 atttggaaggagaattgatat 60000
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>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 507    ggaagttaactcttcaggaaa 527
              |||||||||||||||||||||
Sbjct: 144351 ggaagttaactcttcaggaaa 144331
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>gb|AC102834.8| Mus musculus chromosome 5, clone RP24-299N23, complete sequence
          Length = 170365

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    aaaattaaataatgatattt 418
              ||||||||||||||||||||
Sbjct: 125021 aaaattaaataatgatattt 125040
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>gb|U41026.1| Caenorhabditis elegans cosmid C28G1, complete sequence
          Length = 27364

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 399 aaaattaaataatgatattttcca 422
           |||||||| |||||||||||||||
Sbjct: 375 aaaattaattaatgatattttcca 352
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 47      cctcgccgcagagcacggcg 66
               ||||||||||||||||||||
Sbjct: 4994510 cctcgccgcagagcacggcg 4994491
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>gb|AC134441.4| Mus musculus BAC clone RP24-544J6 from chromosome 5, complete sequence
          Length = 177565

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ctacatttcgatgagcatttggaa 267
             ||||||||||| ||||||||||||
Sbjct: 69092 ctacatttcgaagagcatttggaa 69115
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>gb|AC127290.3| Mus musculus BAC clone RP23-364F13 from chromosome 5, complete sequence
          Length = 187121

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   aaaattaaataatgatattt 418
             ||||||||||||||||||||
Sbjct: 29239 aaaattaaataatgatattt 29258
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>gb|AC124731.5| Mus musculus BAC clone RP23-287B7 from 3, complete sequence
          Length = 201529

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   aaattaaataatgatatttt 419
             ||||||||||||||||||||
Sbjct: 93612 aaattaaataatgatatttt 93631
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>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains the
              NKX2-3 gene for NK2 transcription factor related, locus 3
              (Drosophila), the gene for putative mitochondrial solute
              carrier (MRS3/4) and five CpG islands, complete sequence
          Length = 123160

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ttctcaaaattaaataatga 413
              ||||||||||||||||||||
Sbjct: 123063 ttctcaaaattaaataatga 123044
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>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3
             Contains the 3' part of a novel gene, complete sequence
          Length = 88509

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   ctcaaaattaaataatgata 415
             ||||||||||||||||||||
Sbjct: 38466 ctcaaaattaaataatgata 38447
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>emb|AJ235272.1|RPXX03 Rickettsia prowazekii strain Madrid E, complete genome; segment 3/4
          Length = 279110

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ggagaattgatatacatata 287
             ||||||||||||||||||||
Sbjct: 47903 ggagaattgatatacatata 47922
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>emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in linkage group 23,
             complete sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   taatgatattttccacatga 427
             ||||||||||||||||||||
Sbjct: 71993 taatgatattttccacatga 71974
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>gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex BAC MMU234G08, complete
              sequence
          Length = 200068

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     ggcggagagaagcagccccc 82
              ||||||||||||||||||||
Sbjct: 148711 ggcggagagaagcagccccc 148730
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>gb|AC084214.19|AC084214 Mus musculus X BAC RP23-382J5 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 56321

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 398   caaaattaaataatgatattttcc 421
             |||||||| |||||||||||||||
Sbjct: 41532 caaaattacataatgatattttcc 41509
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      ggcggagagaagcagccccc 82
               ||||||||||||||||||||
Sbjct: 1298544 ggcggagagaagcagccccc 1298525
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>gb|AF262700.1|AF262700 Phascolarctos cinereus olfactory receptor koa13 pseudogene, partial
           sequence
          Length = 649

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 ggaaatggaaagttttctcc 542
           ||||||||||||||||||||
Sbjct: 498 ggaaatggaaagttttctcc 517
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>gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 204899

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   ttctcaaaattaaataatgatatt 417
             ||||||||| ||||||||||||||
Sbjct: 31633 ttctcaaaagtaaataatgatatt 31656
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>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence
          Length = 133042

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    tgaagggcagaatagtgatg 364
              ||||||||||||||||||||
Sbjct: 108600 tgaagggcagaatagtgatg 108619
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>dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXA21
          Length = 87841

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   aaattaaataatgatatttt 419
             ||||||||||||||||||||
Sbjct: 76285 aaattaaataatgatatttt 76304
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>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 144000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   aatgacttctcaaaattaaa 407
             ||||||||||||||||||||
Sbjct: 21922 aatgacttctcaaaattaaa 21941
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>emb|CR848036.8| Zebrafish DNA sequence from clone DKEY-76C17 in linkage group 7,
             complete sequence
          Length = 62086

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   tcaaaattaaataatgatat 416
             ||||||||||||||||||||
Sbjct: 56350 tcaaaattaaataatgatat 56369
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>emb|AL731727.18| Mouse DNA sequence from clone RP23-147K15 on chromosome X, complete
             sequence
          Length = 64392

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 398   caaaattaaataatgatattttcc 421
             |||||||| |||||||||||||||
Sbjct: 16590 caaaattacataatgatattttcc 16613


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,067,932
Number of Sequences: 3902068
Number of extensions: 5067932
Number of successful extensions: 95454
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95297
Number of HSP's gapped (non-prelim): 152
length of query: 580
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 557
effective length of database: 17,143,297,704
effective search space: 9548816821128
effective search space used: 9548816821128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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