ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart36d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ANGLT_ROSHC (Q4R1I9) Anthocyanidin 5,3-O-glucosyltransferase (EC... 54 4e-07
2HQGT_ARATH (Q9M156) Probable hydroquinone glucosyltransferase (E... 50 4e-06
3UFOG5_MANES (Q40287) Anthocyanidin 3-O-glucosyltransferase (EC 2... 40 0.003
4UFOG6_MANES (Q40288) Anthocyanidin 3-O-glucosyltransferase (EC 2... 37 0.047
5UFOG1_MANES (Q40284) Anthocyanidin 3-O-glucosyltransferase (EC 2... 35 0.18
6G6PI_CAMJE (Q9PMD4) Probable glucose-6-phosphate isomerase (EC 5... 30 4.4
7COA2_POVJC (P03095) Coat protein VP2 [Contains: Coat protein VP3] 29 7.5
8PCDGD_PANTR (Q5DRB0) Protocadherin gamma B1 precursor (PCDH-gamm... 29 7.5
9TTC16_HUMAN (Q8NEE8) Tetratricopeptide repeat protein 16 (TPR re... 29 9.7
10AROB_PYRAB (Q9V1H9) 3-dehydroquinate synthase (EC 4.2.3.4) 29 9.7

>ANGLT_ROSHC (Q4R1I9) Anthocyanidin 5,3-O-glucosyltransferase (EC 2.4.1.-)|
           (UDP-glucose: anthocyanidin 5,3-O-glucosyltransferase)
          Length = 473

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 20/190 (10%)
 Frame = +3

Query: 27  VVLYPGLTVSHFVPMVHLAGTLVDHGYAVSVALIDPAV------------NGDPXXXXXX 170
           +VLYP   + H + MV L   L+ H  + S+ ++                + +       
Sbjct: 6   IVLYPYPGLGHLISMVELGKLLLTHHPSFSITILASTAPTTIAATAKLVASSNDQLTNYI 65

Query: 171 XXXXXSMPSVRFHALPPAEDAP--MLTPDAPF------VPRYIDIVGRHNDRLREFLCSS 326
                  P++ FH LP     P  +   + PF      +P  + ++      L+      
Sbjct: 66  KAVSADNPAINFHHLPTISSLPEHIEKLNLPFEYARLQIPNILQVLQTLKSSLK------ 119

Query: 327 TAHAVVVDSLSVEALGVAKRLGIPGYVMFTSGAAALVAFVQLPSVLAQVRARFQDLGDAP 506
              A+++D        V K L IP +  +TS   +L   + +P+      +   D GD P
Sbjct: 120 ---ALILDMFCDALFDVTKDLNIPTFYFYTSAGRSLAVLLNIPTFHRTTNS-LSDFGDVP 175

Query: 507 LELFGLPPMP 536
           + + G+PP+P
Sbjct: 176 ISISGMPPIP 185



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>HQGT_ARATH (Q9M156) Probable hydroquinone glucosyltransferase (EC 2.4.1.218)|
           (Arbutin synthase)
          Length = 480

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 6/175 (3%)
 Frame = +3

Query: 27  VVLYPGLTVSHFVPMVHLAGTLVD-HGYAVSVALIDPAVNGDPXXXXXXXXXXXSMPSVR 203
           V + P   + H +P+V  A  LV  HG  V+  +   A  G P           S+PS  
Sbjct: 9   VAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVI---AGEGPPSKAQRTVLD--SLPSSI 63

Query: 204 FHALPPAEDAPMLTPDAPFVPRYIDIVGRHNDRLREFLCSSTAH-----AVVVDSLSVEA 368
                P  D   L+       R    V R N  LR+   S         A+VVD    +A
Sbjct: 64  SSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDA 123

Query: 369 LGVAKRLGIPGYVMFTSGAAALVAFVQLPSVLAQVRARFQDLGDAPLELFGLPPM 533
             VA    +P Y+ + + A  L  F+ LP +   V   F++L + PL L G  P+
Sbjct: 124 FDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTE-PLMLPGCVPV 177



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>UFOG5_MANES (Q40287) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)|
           (Flavonol 3-O-glucosyltransferase 5) (UDP-glucose
           flavonoid 3-O-glucosyltransferase 5)
          Length = 487

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 4/173 (2%)
 Frame = +3

Query: 27  VVLYPGLTVSHFVPMVHLAGTLVDH-GYAVSVALIDPAVNGDPXXXXXXXXXXXSMPSV- 200
           +VL     + H +P++ L   +V    + V++ +    V  D              P + 
Sbjct: 12  IVLLSSPGLGHLIPVLELGKRIVTLCNFDVTIFM----VGSDTSAAEPQVLRSAMTPKLC 67

Query: 201 RFHALPPAEDAPMLTPDAPFVPRYIDIVGRHNDRLREFLCSSTAH--AVVVDSLSVEALG 374
               LPP   + ++ P+A    R   ++       R  + +      A++VD    E+L 
Sbjct: 68  EIIQLPPPNISCLIDPEATVCTRLFVLMREIRPAFRAAVSALKFRPAAIIVDLFGTESLE 127

Query: 375 VAKRLGIPGYVMFTSGAAALVAFVQLPSVLAQVRARFQDLGDAPLELFGLPPM 533
           VAK LGI  YV   S A  L   + +P +  +V   F  L   P+++ G  P+
Sbjct: 128 VAKELGIAKYVYIASNAWFLALTIYVPILDKEVEGEFV-LQKEPMKIPGCRPV 179



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>UFOG6_MANES (Q40288) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)|
           (Flavonol 3-O-glucosyltransferase 6) (UDP-glucose
           flavonoid 3-O-glucosyltransferase 6) (Fragment)
          Length = 394

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 324 STAHAVVVDSLSVEALGVAKRLGIPGYVMFTSGAAAL--VAFVQL 452
           S+    V+D      + VAK LG+P Y+ FTSGAA L  + +VQL
Sbjct: 29  SSLAGFVLDMFCTSMIDVAKELGVPYYIFFTSGAAFLGFLFYVQL 73



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>UFOG1_MANES (Q40284) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)|
           (Flavonol 3-O-glucosyltransferase 1) (UDP-glucose
           flavonoid 3-O-glucosyltransferase 1)
          Length = 449

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
 Frame = +3

Query: 51  VSHFVPMVHLAGTLVD--HGYAVSVALIDPAVNGDPXXXXXXXXXXXSMPSVRFHALPPA 224
           + H V  V  A  L+   H  +++V + + +V               S   +RF  LP  
Sbjct: 1   MGHLVSAVETAKLLLSRCHSLSITVLIFNNSVVTSKVHNYVDSQIASSSNRLRFIYLP-- 58

Query: 225 EDAPMLTPDAPFVPRYIDIVGRHNDRLREFLCSSTAHAVV---VDSLSVEALGVAKRLGI 395
            D   ++  +  + +    V     ++ EF  S  +  +V   VD      + VA   G+
Sbjct: 59  RDETGISSFSSLIEKQKPHVKESVMKITEFGSSVESPRLVGFIVDMFCTAMIDVANEFGV 118

Query: 396 PGYVMFTSGAAAL 434
           P Y+ +TSGAA L
Sbjct: 119 PSYIFYTSGAAFL 131



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>G6PI_CAMJE (Q9PMD4) Probable glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 406

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
 Frame = +3

Query: 195 SVRFHALPPAEDAPMLTPDAPFVPRYIDIVGRHNDRLREFL---CSSTAHAVVVDSLSVE 365
           +V F  +  A+ AP++ PD  F  +++D +  +   L E L   C +T HA++ ++LSV+
Sbjct: 298 TVTFLKIKDAQKAPII-PDIHF--KFLDSLS-NKVNLHELLNAQCDATMHALIAENLSVD 353

Query: 366 ALGVAK-RLGIPGYVMF 413
            + + K      GY+M+
Sbjct: 354 VIELEKLDAWHAGYLMY 370



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>COA2_POVJC (P03095) Coat protein VP2 [Contains: Coat protein VP3]|
          Length = 343

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 26/74 (35%), Positives = 35/74 (47%)
 Frame = +3

Query: 321 SSTAHAVVVDSLSVEALGVAKRLGIPGYVMFTSGAAALVAFVQLPSVLAQVRARFQDLGD 500
           +ST+ A+    L+ E   V    G PG V   +G AALV  V   S +AQ+  RF    D
Sbjct: 51  TSTSEAIAAIGLTPETYAVIT--GAPGAV---AGFAALVQTVTGGSAIAQLGYRFFADWD 105

Query: 501 APLELFGLPPMPAL 542
             +   GL   PA+
Sbjct: 106 HKVSTVGLFQQPAM 119



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>PCDGD_PANTR (Q5DRB0) Protocadherin gamma B1 precursor (PCDH-gamma-B1)|
          Length = 927

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 541 RAGMGGRPNNSRGASPRSWNL--ARTCARTEGSWTKATSAAAP 419
           ++G G  PN+S G  P S+NL  A   A+TE ++   T   AP
Sbjct: 730 KSGPGVPPNHSEGTLPYSYNLCVASHSAKTEFNFLNLTPEMAP 772



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>TTC16_HUMAN (Q8NEE8) Tetratricopeptide repeat protein 16 (TPR repeat protein|
           16)
          Length = 873

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 535 GMGGRPNNSRGASPRSWNLARTCARTEGSWTKATSAAAPEVN 410
           G G R + + GA  +S  ++ T ++ E +W  + S +  EV+
Sbjct: 823 GQGQRSSKAEGAQGKSQGMSSTSSKAESTWGPSPSLSKTEVD 864



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>AROB_PYRAB (Q9V1H9) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 338

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 21  KTVVLYPGLTVSHFVPMVHLAGTLVDHGYAVSVALIDPAVNGD 149
           K  +L  G TV H +    L+G  + HG+AVSV LI  A  G+
Sbjct: 224 KRRILNLGHTVGHAIEK--LSGYKIKHGFAVSVGLIAAAKLGE 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,418,740
Number of Sequences: 219361
Number of extensions: 662048
Number of successful extensions: 2391
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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